MGI MouseCyc MP annotations for SER-GLYSYN-PWY

MGI MouseCyc experimental MP annotations for superpathway of serine and glycine biosynthesis I

Roles of genes might be detected in a summary/comparison table of high level MP categories.
Complete table of the annotations represented in this image is provided below.
Graph is also available as SVG (requires plug-in)

Gray arrows indicate "is_a";
Blue arrows indicate "part_of";

Compare annotations to MP categories for superpathway of serine and glycine biosynthesis I

Entry indicates that gene is in this pathway.
Colored entries indicate MP annotation.

ID	Term	Phgdh	Psat1	Psph	Shmt1	Shmt2
MP:0005380	embryogenesis phenotype	Phgdh	Psat1	Psph	Shmt1	Shmt2
MP:0005378	growth/size phenotype	Phgdh	Psat1	Psph	Shmt1	Shmt2
MP:0005376	homeostasis/metabolism phenotype	Phgdh	Psat1	Psph	Shmt1	Shmt2
MP:0005374	lethality-prenatal/perinatal	Phgdh	Psat1	Psph	Shmt1	Shmt2
MP:0005371	limbs/digits/tail phenotype	Phgdh	Psat1	Psph	Shmt1	Shmt2
MP:0005370	liver/biliary system phenotype	Phgdh	Psat1	Psph	Shmt1	Shmt2
MP:0003631	nervous system phenotype	Phgdh	Psat1	Psph	Shmt1	Shmt2

Full set of annotations for superpathway of serine and glycine biosynthesis I

ID	Term	Mouse gene	Alleles	Background	Color Key
MP:0000913	abnormal brain development	Phgdh	Phgdh^tm1.1Shfu/Phgdh^tm1.1Shfu	involves: 129P2/OlaHsd * C57BL/6J * FVB/N	color key
MP:0005311	abnormal circulating amino acid level	Shmt1	Shmt1^tm1Stov/Shmt1⁺	involves: 129S7/SvEvBrd * C57BL/6	color key
MP:0005311	abnormal circulating amino acid level	Shmt1	Shmt1^tm1Stov/Shmt1^tm1Stov	involves: 129S7/SvEvBrd * C57BL/6	color key
MP:0000786	abnormal embryonic neuroepithelial layer differentiation	Phgdh	Phgdh^tm1.1Shfu/Phgdh^tm1.1Shfu	involves: 129P2/OlaHsd * C57BL/6J * FVB/N	color key
MP:0004274	abnormal embryonic/fetal subventricular zone morphology	Phgdh	Phgdh^tm1.1Shfu/Phgdh^tm1.1Shfu	involves: 129P2/OlaHsd * C57BL/6J * FVB/N	color key
MP:0000609	abnormal liver physiology	Shmt1	Shmt1^tm1.1Stov/Shmt1^tm1.1Stov	129S/SvEv-Shmt1	color key
MP:0000609	abnormal liver physiology	Shmt1	Shmt1^tm1.1Stov/Shmt1⁺	129S/SvEv-Shmt1	color key
MP:0000609	abnormal liver physiology	Shmt1	Shmt1^tm1.1Stov/Shmt1^tm1.1Stov	involves: 129S7/SvEvBrd * BALB/cJ * C57BL/6	color key
MP:0003861	abnormal nervous system development	Phgdh	Phgdh^tm1.1Shfu/Phgdh^tm1.1Shfu	involves: 129P2/OlaHsd * C57BL/6J * FVB/N	color key
MP:0006008	abnormal neurogenesis	Phgdh	Phgdh^tm1.1Shfu/Phgdh^tm1.1Shfu	involves: 129P2/OlaHsd * C57BL/6J * FVB/N	color key
MP:0000850	absent cerebellum	Phgdh	Phgdh^tm1.1Shfu/Phgdh^tm1.1Shfu	involves: 129P2/OlaHsd * C57BL/6J * FVB/N	color key
MP:0003451	absent olfactory bulb	Phgdh	Phgdh^tm1.1Shfu/Phgdh^tm1.1Shfu	involves: 129P2/OlaHsd * C57BL/6J * FVB/N	color key
MP:0000774	decreased brain size	Phgdh	Phgdh^tm1.1Shfu/Phgdh^tm1.1Shfu	involves: 129P2/OlaHsd * C57BL/6J * FVB/N	color key
MP:0006207	embryonic lethality during organogenesis	Phgdh	Phgdh^tm1.1Shfu/Phgdh^tm1.1Shfu	involves: 129P2/OlaHsd * C57BL/6J * FVB/N	color key
MP:0008535	enlarged lateral ventricles	Phgdh	Phgdh^tm1.1Shfu/Phgdh^tm1.1Shfu	involves: 129P2/OlaHsd * C57BL/6J * FVB/N	color key
MP:0000914	exencephaly	Phgdh	Phgdh^tm1.1Shfu/Phgdh^tm1.1Shfu	involves: 129P2/OlaHsd * C57BL/6J * FVB/N	color key
MP:0000784	forebrain hypoplasia	Phgdh	Phgdh^tm1.1Shfu/Phgdh^tm1.1Shfu	involves: 129P2/OlaHsd * C57BL/6J * FVB/N	color key
MP:0000571	interdigital webbing	Phgdh	Phgdh^tm1.1Shfu/Phgdh^tm1.1Shfu	involves: 129P2/OlaHsd * C57BL/6J * FVB/N	color key
MP:0001698	reduced embryo size	Phgdh	Phgdh^tm1.1Shfu/Phgdh^tm1.1Shfu	involves: 129P2/OlaHsd * C57BL/6J * FVB/N	color key