MGI MouseCyc MP annotations for PWY-3561

MGI MouseCyc experimental MP annotations for choline biosynthesis III

Roles of genes might be detected in a summary/comparison table of high level MP categories.
Complete table of the annotations represented in this image is provided below.
Graph is also available as SVG (requires plug-in)

Gray arrows indicate "is_a";
Blue arrows indicate "part_of";

Compare annotations to MP categories for choline biosynthesis III

Entry indicates that gene is in this pathway.
Colored entries indicate MP annotation.

ID	Term	Cept1	Chpt1	Pcyt1a	Pcyt1b	Pld1	Pld2	Pld3	Pld4
MP:0005380	embryogenesis phenotype	Cept1	Chpt1	Pcyt1a	Pcyt1b	Pld1	Pld2	Pld3	Pld4
MP:0005379	endocrine/exocrine gland phenotype	Cept1	Chpt1	Pcyt1a	Pcyt1b	Pld1	Pld2	Pld3	Pld4
MP:0005378	growth/size phenotype	Cept1	Chpt1	Pcyt1a	Pcyt1b	Pld1	Pld2	Pld3	Pld4
MP:0005376	homeostasis/metabolism phenotype	Cept1	Chpt1	Pcyt1a	Pcyt1b	Pld1	Pld2	Pld3	Pld4
MP:0005387	immune system phenotype	Cept1	Chpt1	Pcyt1a	Pcyt1b	Pld1	Pld2	Pld3	Pld4
MP:0005374	lethality-prenatal/perinatal	Cept1	Chpt1	Pcyt1a	Pcyt1b	Pld1	Pld2	Pld3	Pld4
MP:0005389	reproductive system phenotype	Cept1	Chpt1	Pcyt1a	Pcyt1b	Pld1	Pld2	Pld3	Pld4
MP:0002006	tumorigenesis	Cept1	Chpt1	Pcyt1a	Pcyt1b	Pld1	Pld2	Pld3	Pld4

Full set of annotations for choline biosynthesis III

ID	Term	Mouse gene	Alleles	Background	Color Key
MP:0001819	abnormal immune cell physiology	Pcyt1a	Lyz2^tm1(cre)Ifo/Lyz2⁺,Pcyt1a^tm1Irt/Pcyt1a^tm1Irt	involves: 129/Sv * C57BL/6J	color key
MP:0002451	abnormal macrophage physiology	Pcyt1a	Lyz2^tm1(cre)Ifo/Lyz2⁺,Pcyt1a^tm1Irt/Pcyt1a^tm1Irt	involves: 129/Sv * C57BL/6J	color key
MP:0001126	abnormal ovary morphology	Pcyt1b	Pcyt1b^tm1Mkar/Pcyt1b^tm1Mkar	involves: 129S1/Sv * C57BL/6J	color key
MP:0001156	abnormal spermatogenesis	Pcyt1b	Pcyt1b^tm1Mkar/Y	involves: 129S1/Sv * C57BL/6J	color key
MP:0001134	absent corpus luteum	Pcyt1b	Pcyt1b^tm1Mkar/Pcyt1b^tm1Mkar	involves: 129S1/Sv * C57BL/6J	color key
MP:0001134	absent corpus luteum	Pcyt1b	Pcyt1b^tm1Mkar/Pcyt1b⁺	involves: 129S1/Sv * C57BL/6J	color key
MP:0002777	absent ovarian follicles	Pcyt1b	Pcyt1b^tm1Mkar/Pcyt1b^tm1Mkar	involves: 129S1/Sv * C57BL/6J	color key
MP:0002777	absent ovarian follicles	Pcyt1b	Pcyt1b^tm1Mkar/Pcyt1b⁺	involves: 129S1/Sv * C57BL/6J	color key
MP:0003984	embryonic growth retardation	Pcyt1a	Pcyt1a^tm1.1Irt/Pcyt1a^tm1.1Irt	involves: FVB/N	color key
MP:0006204	embryonic lethality before implantation	Pcyt1a	Pcyt1a^tm1.1Irt/Pcyt1a^tm1.1Irt	involves: FVB/N	color key
MP:0001728	failure of implantation	Pcyt1a	Pcyt1a^tm1.1Irt/Pcyt1a^tm1.1Irt	involves: FVB/N	color key
MP:0001926	female infertility	Pcyt1b	Pcyt1b^tm1Mkar/Pcyt1b⁺	involves: 129S1/Sv * C57BL/6J	color key
MP:0001926	female infertility	Pcyt1b	Pcyt1b^tm1Mkar/Pcyt1b^tm1Mkar	involves: 129S1/Sv * C57BL/6J	color key
MP:0001750	increased circulating follicle stimulating hormone level	Pcyt1b	Pcyt1b^tm1Mkar/Pcyt1b^tm1Mkar	involves: 129S1/Sv * C57BL/6J	color key
MP:0001751	increased circulating luteinizing hormone level	Pcyt1b	Pcyt1b^tm1Mkar/Pcyt1b^tm1Mkar	involves: 129S1/Sv * C57BL/6J	color key
MP:0002020	increased tumor incidence	Pcyt1b	Pcyt1b^tm1Mkar/Pcyt1b^tm1Mkar	involves: 129S1/Sv * C57BL/6J	color key
MP:0001128	ovary hyperplasia	Pcyt1b	Pcyt1b^tm1Mkar/Pcyt1b^tm1Mkar	involves: 129S1/Sv * C57BL/6J	color key
MP:0001922	reduced male fertility	Pcyt1b	Pcyt1b^tm1Mkar/Y	involves: 129S1/Sv * C57BL/6J	color key
MP:0001154	seminiferous tubule degeneration	Pcyt1b	Pcyt1b^tm1Mkar/Y	involves: 129S1/Sv * C57BL/6J	color key
MP:0003205	testicular atrophy	Pcyt1b	Pcyt1b^tm1Mkar/Y	involves: 129S1/Sv * C57BL/6J	color key