# Copyright © 2009, The Jackson Laboratory and SRI International. All Rights Reserved. # # Authors: # Carol J. Bult, The Jackson Laboratory # Emily J. Patek, The Jackson Laboratory # Alexei V. Evsikov, The Jackson Laboratory # Mary E. Dolan, The Jackson Laboratory & The University of Maine # # Please see the license agreement regarding the use of and distribution of this file. # The format of this file is defined at http://bioinformatics.ai.sri.com/ptools/flatfile-format.html . # # Species: Mus musculus # Database: NIL # Version: 1.55 # File Name: classes.dat # Date and time generated: November 5, 2010, 13:28:04 # UNIQUE-ID - CCO TYPES - FRAMES COMMON-NAME - Cell Component Ontology COMMENT - This class is the root of the Cell Component Ontology. // UNIQUE-ID - Chemicals TYPES - FRAMES COMMON-NAME - a chemical COMMENT - An instance of this class is a chemical entity of some type, including /elements, small molecular weight chemical compounds, and /macromolecules. This class does not include fragments of /molecules, such as regions within a protein. // UNIQUE-ID - Compound-Mixtures TYPES - FRAMES COMMENT - Instances of this class are used to define sets of compounds, or mixtures. /Example uses include describing the biomass composition of an organism for the purpose /of computational analysis, and describing growth media. // UNIQUE-ID - Databases TYPES - FRAMES COMMON-NAME - Databases // UNIQUE-ID - EC-BOOKKEEPING TYPES - FRAMES COMMENT - This slot stores meta-information used to track changes to the EC taxonomy, e.g. deleted or merged EC numbers. // UNIQUE-ID - Enzymatic-Reactions TYPES - FRAMES COMMENT - An instance of this class defines an association between an enzyme and /a reaction that the enzyme catalyzes. The slots of this class define /information specific to that association, such as small molecules that /act as cofactors of the catalysis of that /reaction by that enzyme, and kinetic parameters of the enzyme. /Enzymatic-Reactions also link via the Regulated-By slot to /objects that define substrate-level regulation of this enzyme activity. /It is improper to store that information with either the reaction or the /enzyme because a given enzyme might catalyze multiple reactions, /and a given reaction might be catalyzed by more than one enzyme. / // UNIQUE-ID - Evidence TYPES - FRAMES COMMENT - The Evidence class defines a controlled vocabulary of evidence types. Each term in the vocabulary /defines a type of evidence that pertains to an assertion in this database. Example assertions include /the assertion that a pathway exists, or the assertion that an operon exists. Example uses of the /evidence vocabulary are to record what type of evidence supports the assertion that an operon exists, /such as whether the evidence is based on a computational analysis or a wet-lab experiment, and if the /latter, what type of wet-lab experiment. // UNIQUE-ID - Gene-Ontology-Terms TYPES - FRAMES COMMENT - Class Gene-Ontology-Terms is the root of the Gene Ontology (GO). In a PGDB, /gene products (including monomers, multimers, and chemically modified forms /thereof) are assigned to GO terms in this hierarchy. // UNIQUE-ID - Generalized-Reactions TYPES - FRAMES // UNIQUE-ID - KB-DESCRIPTOR TYPES - FRAMES // UNIQUE-ID - Notes TYPES - FRAMES // UNIQUE-ID - Organisms TYPES - FRAMES COMMENT - The Organisms class is used in different ways in organism-specific /PGDBs versus in multiorganism PGDBs such as MetaCyc. The /next paragraph discusses what is common to both types of PGDBs. /Subsequent paragraphs describe the differences. / /In all PGDBs, subclasses of Organisms define biological taxa, at all /possible taxonomic levels. Class-subclass relationships between /subclasses of Organisms describe their taxonomic relationships, /since, for example, the class Bacteria includes as a subclass the /class Alphaproteobacteria. Generally, most of the taxonomic /groups under Organisms correspond to entries from the NCBI Taxonomy /database (which is stored in its entirety in a separate Ocelot KB). But in /addition to taxa from NCBI Taxonomy, a PGDB can contain subclasses /for additional taxa that are not present in the NCBI Taxonomy. / /Organism-specific PGDBs: In an organism-specific PGDB, the only /frames that exist as children of Organisms are those frames needed to /describe the taxonomic lineage of the organism described by the PGDB. /An organism-specific PGDB contains a single instance frame that /describes information about the PGDB itself. A parent class P of that /instance must exist to describe the lowest taxonomic group defined for the /organism. Additional parent classes exist as parents of P and /children of Organisms that describe the other known taxonomic /parents of P. No other children of Organisms exist in the PGDB. / /Multiorganism PGDBs such as MetaCyc: Multiorganism PGDBs contain /no instances of class Organisms, but only subclasses of this class. Those /subclasses define each of the different organisms for which MetaCyc /(for example) defines pathways and enzymes. For economy of storage, /only those taxa (and their parent taxa) actually referenced in the PGDB are /stored in the PGDB, so that only a subset of the NCBI Taxonomy is /replicated in the PGDB. There is only one instance of /Multi-Organism-Groupings that describes the properties of the PGDB. / // UNIQUE-ID - Organizations TYPES - FRAMES COMMENT - An instance of this class defines an organization with which an author of /information in a PGDB is associated. / // UNIQUE-ID - Paralogous-Gene-Groups TYPES - FRAMES COMMENT - Each instance of this class describes a single group /of paralogous genes. / // UNIQUE-ID - People TYPES - FRAMES COMMENT - An instance of this class describes a person who has contributed information /to a PGDB as a curator. // UNIQUE-ID - Polymer-Segments TYPES - FRAMES COMMENT - Describes a linear region of a polymer, such a a segment of a DNA /molecule or of an amino-acid chain. // UNIQUE-ID - Protein-Features TYPES - FRAMES COMMENT - Instances of of this class define a region of interest on a polypeptide, plus, /optionally, one or more states associated with the region. Different subclasses are used to specify /points, linear regions, and regions involving noncontiguous segments of an amino-acid chain. / /For example, an instance F of this class could define an amino-acid residue that /can be phosphorylated, plus the fact that this residue can take on two possible /states: MODIFIED (i.e. phosphorylated) and UNMODIFIED (i.e. unphosphorylated). The feature instance /itself does not describe the state of a particular protein. Instead, we would /represent the phosphorylated and unphosphorylated forms of a protein by /creating two instances of class Proteins. Both of those instances, in their /FEATURES slot, would contain the value F, linking to the same feature /instance. However, in the two proteins, F would be annotated differently /to indicate the state of that feature. One protein would use an /annotation label STATE with a value MODIFIED to denote /that the residue is phosphorylated. / / // UNIQUE-ID - Publications TYPES - FRAMES COMMENT - Instances of this class are publications, usually those cited within a PGDB. // UNIQUE-ID - Regulation TYPES - FRAMES COMMENT - This class describes most forms of protein, RNA or activity regulation. Regulation can be either by a direct influence on the protein's activity /(e.g. allosteric inhibition of an enzyme) or by influencing the quantity of active protein available (e.g. by inducing or blocking its transcription /or translation). The one form of regulation that is not covered by this class is when the quantity of a protein is regulated as a result of chemical /or binding reactions that either produce or consume the active form of a protein -- these are represented as Reactions instead. There can be /some ambiguity as to what should be represented as a reaction and what should be represented as a regulation event. In general, an event that /can be represented as a reaction should be when a) there is sufficiently detailed information known to model it as a reaction, b) both reactants /and products exist as stable, independent entities, and c) our schema supports referring to both reactant and product of the reaction independently /and there is some justification for wanting to go down to that level of detail. For example, a transcription factor bound to a small molecule will /generally have a different activity than the unbound transcription factor. This could be represented either as the reaction TF + x -> TF-x or as /a regulation event in which x activates or inhibits the activity of TF. However, because both TF and TF-x are stable molecules which can /potentially regulate different transcription units (not all will, but some do), or TF could bind another small molecule y and regulate yet another set /of transcription units, we prefer to model this kind of interaction as a reaction when the data is available. On the other hand, an enzyme binding to /some inhibitor could also be represented as a reaction, but since there is rarely any reason to refer to the enzyme-inhibitor complex outside of /the context of the reaction the enzyme catalyzes, we choose instead to model these events as regulation events in which the inhibitor regulates the /activity of the enzyme. / /Instances of this class represent a one-to-one mapping between regulator and regulated-entity (i.e. an entity may regulate many processes, or a /process may be regulated by many entities, but each one requires its own instance of Regulation to represent it) // UNIQUE-ID - CCO-CELL-FRACT TYPES - CCO COMMON-NAME - cell fraction COMMENT - Refers to artificial cell components that are derived from disruptive cell biological techniques. The components are not present within any cells. // UNIQUE-ID - CCO-ENVELOPE TYPES - CCO COMMON-NAME - envelope // UNIQUE-ID - CCO-MEMBRANE TYPES - CCO COMMON-NAME - membrane // UNIQUE-ID - CCO-ORGANELLE TYPES - CCO COMMON-NAME - organelle // UNIQUE-ID - CCO-SPACE TYPES - CCO COMMON-NAME - space // UNIQUE-ID - CCO-SUBORG-CMPT TYPES - CCO COMMON-NAME - suborganelle compartment // UNIQUE-ID - CCO-SUPER-COMP TYPES - CCO COMMON-NAME - super component // UNIQUE-ID - CCO-SURFACE-MAT TYPES - CCO COMMON-NAME - cell surface matrix // UNIQUE-ID - Compounds-And-Elements TYPES - Chemicals COMMON-NAME - a small molecule or an element COMMENT - This class allows us to index compounds and elements together. // UNIQUE-ID - Holder-Class TYPES - Chemicals COMMON-NAME - a nonspecific substrate COMMENT - This class was created for substrates whose names imply a broad specificity for a given enzyme. These nonspecific substrates are often involved in multiple reactions. Exceptions and addendums to activity will be included in the comments on the reaction frame. // UNIQUE-ID - Macromolecules TYPES - Chemicals COMMON-NAME - a macromolecule // UNIQUE-ID - Subatomic-Particles TYPES - Chemicals COMMON-NAME - a subatomic particle COMMENT - This class holds subatomic particles, such as an electron and a proton. // UNIQUE-ID - Polymer-Segment-Enzyme-Substrates TYPES - Compounds TYPES - Polymer-Segments COMMENT - This class contains reaction substrates that stand for a segment or section of an extended polymer, like a nucleic acid. /An enzyme might typically recognize a limited motif on the polymer, but the detailed sequence of the full length polymer will not matter in such reactions. // UNIQUE-ID - Biomass-Compositions TYPES - Compound-Mixtures COMMENT - Biomass is described as a set of compounds, which together form a mixture. /It is a target set of compounds, usually representative of key intermediates in the metabolism. /In computational analysis, one often assumes the cell is alive if all the compounds /in the biomass set can be produced from the compounds in a growth medium. /The biomass set of compounds is listed in the COMPOSITION slot. // UNIQUE-ID - Growth-Media TYPES - Compound-Mixtures COMMENT - A growth medium is described as a set of compounds, which together form a mixture. /A distinction is made between the primary composition, which is the food the organism needs, /and trace nutrients, which are also needed, but in much smaller quantities. This distinction /was made in the traditional recipes for growth media. /The primary set of compounds is listed in the COMPOSITION slot, and the trace nutrient set of /compounds is listed in the TRACE-NUTRIENTS slot. // UNIQUE-ID - EV-AS TYPES - Evidence COMMON-NAME - Author statement COMMENT - Author statement. The evidence for an assertion comes from an author /statement in a publication, where that publication does not state direct experimental support /for the assertion. Ordinarily, this code will not be used directly -- generally one of /its child codes, EV-TAS or EV-NAS, will be used instead. / // UNIQUE-ID - EV-COMP TYPES - Evidence COMMON-NAME - Inferred by computational analysis COMMENT - Inferred from computation. The evidence for an assertion comes from a /computational analysis. The assertion itself might have been made /by a person or by a computer, that is, EV-COMP does not specify whether /manual interpretation of the computation occurred. / / // UNIQUE-ID - EV-EXP TYPES - Evidence COMMON-NAME - Inferred from experiment COMMENT - Inferred from experiment. The evidence for an assertion comes from a /wet-lab experiment of some type. / // UNIQUE-ID - EV-IC TYPES - Evidence COMMON-NAME - Inferred by curator COMMENT - Inferred by curator. An assertion was inferred by a curator from relevant /information such as other assertions in a database. / // UNIQUE-ID - GO:0001505 TYPES - Gene-Ontology-Terms COMMON-NAME - regulation of neurotransmitter levels // UNIQUE-ID - GO:0001506 TYPES - Gene-Ontology-Terms COMMON-NAME - neurotransmitter biosynthesis and storage COMMENT - This term was made obsolete because it is an amalgamation of its two children. To update annotations, consider the biological process terms 'sequestering of neurotransmitter ; GO\:0042137', 'neurotransmitter biosynthesis ; GO\:0042136'. SYNONYMS - neurotransmitter anabolism and storage SYNONYMS - neurotransmitter formation and storage SYNONYMS - neurotransmitter synthesis and storage // UNIQUE-ID - GO:0001584 TYPES - Gene-Ontology-Terms COMMON-NAME - rhodopsin-like receptor activity COMMENT - This term was made obsolete because it represents a gene product and is named based on protein features. SYNONYMS - Class A G protein coupled receptor SYNONYMS - Class A G-protein coupled receptor SYNONYMS - Class A GPCR SYNONYMS - class A orphan receptor activity // UNIQUE-ID - GO:0003674 TYPES - Gene-Ontology-Terms COMMON-NAME - molecular_function COMMENT - Note that, in addition to forming the root of the molecular function ontology, this term is recommended for use for the annotation of gene products whose molecular function is unknown. Note that when this term is used for annotation, it indicates that no information was available about the molecular function of the gene product annotated as of the date the annotation was made; the evidence code ND, no data, is used to indicate this. // UNIQUE-ID - GO:0003683 TYPES - Gene-Ontology-Terms COMMON-NAME - lamin/chromatin binding COMMENT - This term was made obsolete because it represents two functions. To update annotations, use the molecular function terms 'lamin binding ; GO\:0005521' and 'chromatin binding ; GO\:0003682'. // UNIQUE-ID - GO:0005489 TYPES - Gene-Ontology-Terms COMMON-NAME - electron transporter activity COMMENT - This term was made obsolete because the activity described by the definition does not exist. // UNIQUE-ID - GO:0005575 TYPES - Gene-Ontology-Terms COMMON-NAME - cellular_component COMMENT - Note that, in addition to forming the root of the cellular component ontology, this term is recommended for use for the annotation of gene products whose cellular component is unknown. Note that when this term is used for annotation, it indicates that no information was available about the cellular component of the gene product annotated as of the date the annotation was made; the evidence code ND, no data, is used to indicate this. // UNIQUE-ID - GO:0006118 TYPES - Gene-Ontology-Terms COMMON-NAME - electron transport COMMENT - This term was made obsolete because it describes a molecular function. SYNONYMS - 6-phosphofructokinase reduction SYNONYMS - dihydrobiopterin reduction SYNONYMS - dihydrolipoamide reduction SYNONYMS - dihydrolipoylprotein reduction SYNONYMS - dihydropteridine reduction SYNONYMS - other pathways of electron transport SYNONYMS - oxidized glutathione reduction SYNONYMS - protein-disulfide reduction SYNONYMS - electron transfer // UNIQUE-ID - GO:0006802 TYPES - Gene-Ontology-Terms COMMON-NAME - catalase reaction COMMENT - This term was made obsolete because it represents a molecular function. To update annotations, consider the molecular function term 'catalase activity ; GO\:0004096'. SYNONYMS - hydroperoxidase reaction // UNIQUE-ID - GO:0006804 TYPES - Gene-Ontology-Terms COMMON-NAME - peroxidase reaction COMMENT - This term was made obsolete because it represents a molecular function. To update annotations, use the molecular function term 'peroxidase activity ; GO\:0004601'. // UNIQUE-ID - GO:0007268 TYPES - Gene-Ontology-Terms COMMON-NAME - synaptic transmission SYNONYMS - regulation of synapse // UNIQUE-ID - GO:0007345 TYPES - Gene-Ontology-Terms COMMON-NAME - embryogenesis and morphogenesis COMMENT - This term was made obsolete because more appropriate terms were created. Morphogenesis in plants also occurs outside of embryogenesis. To update annotations, consider the biological process terms 'embryonic development ; GO\:0009790' or 'morphogenesis ; GO\:0009653'. // UNIQUE-ID - GO:0008150 TYPES - Gene-Ontology-Terms COMMON-NAME - biological_process COMMENT - Note that, in addition to forming the root of the biological process ontology, this term is recommended for use for the annotation of gene products whose biological process is unknown. Note that when this term is used for annotation, it indicates that no information was available about the biological process of the gene product annotated as of the date the annotation was made; the evidence code ND, no data, is used to indicate this. // UNIQUE-ID - GO:0008181 TYPES - Gene-Ontology-Terms COMMON-NAME - tumor suppressor COMMENT - This term was made obsolete because it does not represent a true biological function, rather a pathology that occurs when a particular gene product is inactivated in some way. // UNIQUE-ID - GO:0008246 TYPES - Gene-Ontology-Terms COMMON-NAME - electron transfer flavoprotein COMMENT - This term was made obsolete because it refers to a class of gene products. SYNONYMS - ETF // UNIQUE-ID - GO:0009492 TYPES - Gene-Ontology-Terms COMMON-NAME - 2Fe-2S electron transfer carrier COMMENT - This term was made obsolete because it refers to a class of gene products. To update annotations, use the molecular function term 'electron carrier activity ; GO\:0009055'. // UNIQUE-ID - GO:0015034 TYPES - Gene-Ontology-Terms COMMON-NAME - cytochrome P450 activity COMMENT - This term was made obsolete because it is a grouping term representing a set of gene products. To update annotations, consider the molecular function term 'oxygen binding ; GO\:0019825'. // UNIQUE-ID - GO:0015482 TYPES - Gene-Ontology-Terms COMMON-NAME - voltage-gated anion channel porin activity COMMENT - This term was made obsolete because it wrongly combines voltage-gated anion channel activity and porin activity. SYNONYMS - voltage-dependent anion channel porin activity // UNIQUE-ID - GO:0015997 TYPES - Gene-Ontology-Terms COMMON-NAME - ubiquinone biosynthetic process monooxygenase activity COMMENT - This term was made obsolete because it incorporates biological process information. SYNONYMS - coenzyme Q biosynthesis monooxygenase activity SYNONYMS - coenzyme Q biosynthetic process monooxygenase activity SYNONYMS - ubiquinone anabolism monooxygenase activity SYNONYMS - ubiquinone formation monooxygenase activity SYNONYMS - ubiquinone synthesis monooxygenase activity // UNIQUE-ID - GO:0042280 TYPES - Gene-Ontology-Terms COMMON-NAME - cell surface antigen activity, host-interacting COMMENT - This term was made obsolete because describing something as an 'antigen' means that an organism can produce antibodies to it, which says nothing about the gene product activity. To update annotations, consider the molecular function term 'host cell surface receptor binding ; GO\:0046789' and the biological process term 'symbiotic interaction between host and other organism ; GO\:0044404' and its children. // UNIQUE-ID - GO:0043037 TYPES - Gene-Ontology-Terms COMMON-NAME - translation SYNONYMS - protein translation // UNIQUE-ID - GO:0046138 TYPES - Gene-Ontology-Terms COMMON-NAME - coenzyme and prosthetic group biosynthesis COMMENT - This term was made obsolete because it was replaced by more specific terms. To update annotations, consider the biological process terms 'coenzyme biosynthesis ; GO\:0009108' and 'prosthetic group biosynthesis ; GO\:0051191'. // UNIQUE-ID - GO:0050516 TYPES - Gene-Ontology-Terms COMMON-NAME - inositol polyphosphate multikinase activity COMMENT - This term was made obsolete because this activity is currently defined as catalyzing two sequential reactions based on a gene product. However, "inositol polyphosphate multikinase activity" in some organisms can catalyze additional reactions. In addition, the reactions listed in the definition can be catalyzed independently by other gene products. SYNONYMS - ArgRIII SYNONYMS - AtIpk2-alpha activity SYNONYMS - AtIpk2-beta activity SYNONYMS - AtIpk2alpha SYNONYMS - AtIpk2beta SYNONYMS - ATP:1D-myo-inositol-1,4,5-trisphosphate 6-phosphotransferase activity SYNONYMS - inositol polyphosphate 6-/3-/5-kinase activity SYNONYMS - inositol-polyphosphate multikinase activity SYNONYMS - IP3/IP4 6-/3-kinase activity SYNONYMS - IP3/IP4 dual-specificity 6-/3-kinase activity SYNONYMS - IpK2 activity SYNONYMS - IpmK // UNIQUE-ID - GO:0050517 TYPES - Gene-Ontology-Terms COMMON-NAME - inositol hexakisphosphate kinase activity COMMENT - Note that this was EC:2.7.1.152. This term was made obsolete because this activity is currently defined as catalyzing two reactions based on a gene product. The reactions listed in the definition can be catalyzed independently by other gene products. SYNONYMS - ATP:1D-myo-inositol-hexakisphosphate 5-phosphotransferase activity SYNONYMS - ATP:1D-myo-inositol-hexakisphosphate phosphotransferase activity SYNONYMS - inositol-hexakisphosphate kinase activity // UNIQUE-ID - Pathways TYPES - Generalized-Reactions COMMENT - This class is the root of a classification hierarchy for metabolic /pathways. Its subclasses divide pathways into groups /based on their biological functions, and based on the classes /of metabolites that they produce and/or consume. // UNIQUE-ID - Reactions TYPES - Generalized-Reactions COMMENT - An instance of this class is a chemical transformation of some type. It /may involve small molecules or macromolecules. / // UNIQUE-ID - TAX-1 TYPES - Organisms COMMON-NAME - root SYNONYMS - all // UNIQUE-ID - DNA-Segments TYPES - Polymer-Segments COMMON-NAME - a DNA segment COMMENT - Describes a region of a DNA molecule, such as a gene or a promoter. // UNIQUE-ID - mRNA-Segments TYPES - Polymer-Segments COMMENT - This class defines segments within mRNA transcripts. Although any given mRNA is a transcript of only /a small portion of the replicon, for precision's sake, start and end locations of mRNA segments are defined relative to the start /of the corresponding replicon, not relative to the start of the mRNA transcript. This approach also /allows us to avoid creation of frames for the transcripts themselves. / // UNIQUE-ID - Protein-Segments TYPES - Protein-Features TYPES - Polymer-Segments COMMENT - Describes a feature that is a contiguous linear region of an amino-acid chain. /The location of the region is specified using slots LEFT-END-POSITION /and RIGHT-END-POSITION. / // UNIQUE-ID - Amino-Acid-Sites TYPES - Protein-Features COMMENT - Members of this class describe modifications to, binding to,or /other interesting features of one or more specific (and generally /non-contiguous) amino acid residues in a polypeptide, as /opposed to a larger bounded region. The set of residues /defining the feature is encoded using slots RESIDUE-NUMBER /(which lists the index within the amino-acid sequence of the /indicated residue), and RESIDUE-TYPE (which lists the /one-letter code of that residue). The values of these two /slots must be in parallel order. The second slot is needed in /cases where the full amino-acid sequence of the protein is not available. // UNIQUE-ID - Protein-Binding-Features TYPES - Protein-Features COMMENT - Describes a feature that binds some other entity, such as a small molecule, site of some other protein, etc. /Slot ATTACHED-GROUP specifies that entity. / // UNIQUE-ID - Regulation-of-Enzyme-Activity TYPES - Regulation COMMENT - Instances of this class describe substrate-level modulation of enzyme activity. The /situation where a small molecule competitively inhibits an enzyme activity would /be represented as follows: /Regulator = The small molecule /Regulated-Entity = The enzymatic reaction for that enzyme activity /Mechanism = Competitive /Mode = + / /Possible mechanisms and their definitions are as follows: /Allosteric -- Allosteric regulators increase or decrease the enzyme activity by binding reversibly to the enzyme and inducing a conformational change that alters the affinity of the enzyme to its substrates without affecting its VMAX. /Competitive -- Competitive inhibitors bind reversibly to the enzyme, preventing the substrate from binding. Binding of the inhibitor and substrate are mutually exclusive because it is assumed that the inhibitor and substrate can both bind only to the free enzyme. /Noncompetitive -- Noncompetitive inhibitors can bind to either the free enzyme or to the enzyme-substrate complex. The inhibitor and substrate may be bound to the enzyme simultaneously and do not exclude each other. However, only the enzyme-substrate complex (not the enzyme-substrate-inhibitor complex) is catalytically active. /Uncompetitive -- Uncompetitive inhibitors inhibit the enzyme by binding reversibly to the enzyme-substrate complex, but not to the enzyme alone. /Irreversible -- Irreversible inhibitors bind to the enzyme and dissociate so slowly that it is considered irreversible. For example, alkylating agents such as iodoacetamide irreversibly inhibit the catalytic activity of some enzymes by modifying cysteine side chains. /Other -- Regulators that regulate the enzyme activity by a mechanism that has been characterized but cannot be clearly classified as one of the above mechanisms. / /If no mechanism is specified, then the mechanism is unknown, either because the mechanism has yet to be elucidated in the experimental literature, or because a full literature search has yet to be performed. / // UNIQUE-ID - Regulation-of-Gene-Products TYPES - Regulation // UNIQUE-ID - Regulation-of-Reactions TYPES - Regulation // UNIQUE-ID - Regulation-of-Transcription TYPES - Regulation // UNIQUE-ID - Regulation-of-Translation TYPES - Regulation COMMENT - In this class of regulation, translation of an mRNA transcript is regulated to activate or inhibit formation of the /corresponding protein. Relevant regulatory mechanisms include those that directly interfere with or facilitate the translation process, /as well as those involving processing of the mRNA transcript to promote or inhibit its degradation before translation. // UNIQUE-ID - CCO-CE-BAC TYPES - CCO-ENVELOPE COMMON-NAME - cell envelope (sensu Bacteria) COMMENT - GO definition of cell envelope does not include the cell membrane. // UNIQUE-ID - CCO-ORGANEL-ENV TYPES - CCO-ENVELOPE COMMON-NAME - organellar envelope // UNIQUE-ID - CCO-ENDO-MEM TYPES - CCO-MEMBRANE COMMON-NAME - endosome membrane // UNIQUE-ID - CCO-ER-MEM TYPES - CCO-MEMBRANE COMMON-NAME - endoplasmic reticulum membrane SYNONYMS - ER membrane // UNIQUE-ID - CCO-MBODY-MEM TYPES - CCO-MEMBRANE COMMON-NAME - microbody membrane // UNIQUE-ID - CCO-MIT-MEM TYPES - CCO-MEMBRANE COMMON-NAME - mitochondrial membrane // UNIQUE-ID - CCO-NUC-MEM TYPES - CCO-MEMBRANE COMMON-NAME - nuclear membrane COMMENT - some sources use the same term refer to nuclear envelope. We distinguish them. The term nuclear membrane is a classification term for the inner and outer nuclear membranes. It does not include the perinuclear space. // UNIQUE-ID - CCO-PLASMA-MEM TYPES - CCO-MEMBRANE COMMON-NAME - plasma membrane SYNONYMS - cell membrane SYNONYMS - cytoplasmic membrane SYNONYMS - plasmalemma // UNIQUE-ID - CCO-PLASTID-MEM TYPES - CCO-MEMBRANE COMMON-NAME - plastid membrane COMMENT - The term plastid membrane is a classification term for the inner and outer mitochondrial membranes. It does not include the intermembrane space. // UNIQUE-ID - CCO-THY-MEM TYPES - CCO-MEMBRANE COMMON-NAME - thylakoid membrane // UNIQUE-ID - CCO-MEM-ORG TYPES - CCO-ORGANELLE COMMON-NAME - membrane-bound organelle // UNIQUE-ID - CCO-NON-MEM-ORG TYPES - CCO-ORGANELLE COMMON-NAME - non-membrane-bound organelle // UNIQUE-ID - CCO-ENDO-LUM TYPES - CCO-SPACE COMMON-NAME - endosome lumen // UNIQUE-ID - CCO-ER-LUM TYPES - CCO-SPACE COMMON-NAME - endoplasmic reticulum lumen SYNONYMS - ER lumen // UNIQUE-ID - CCO-MICRO-LUM TYPES - CCO-SPACE COMMON-NAME - microbody lumen // UNIQUE-ID - CCO-PERIPLASM TYPES - CCO-SPACE COMMON-NAME - periplasmic space SYNONYMS - periplasm // UNIQUE-ID - CCO-PLAST-IM-SPC TYPES - CCO-SPACE COMMON-NAME - plastid intermembrane space // UNIQUE-ID - CCO-PLASTID-STR TYPES - CCO-SPACE COMMON-NAME - plastid stroma // UNIQUE-ID - CCO-THY-LUM TYPES - CCO-SPACE COMMON-NAME - thylakoid lumen // UNIQUE-ID - CCO-GOLGI-CIST TYPES - CCO-SUBORG-CMPT COMMON-NAME - Golgi cisterna // UNIQUE-ID - CCO-PLAST-THY TYPES - CCO-SUBORG-CMPT COMMON-NAME - plastid thylakoid // UNIQUE-ID - CCO-CELLWALL TYPES - CCO-SURFACE-MAT COMMON-NAME - cell wall // UNIQUE-ID - All-Elements TYPES - Compounds-And-Elements COMMON-NAME - All Elements COMMENT - This class exists for historical reasons. It used to differ from the Elements class, /but currently it does not. / // UNIQUE-ID - Compounds TYPES - Compounds-And-Elements COMMON-NAME - a small molecule COMMENT - This class describes small molecules, that is, chemical compounds that are /not macromolecules. Some subclasses of this class define "generic reaction /substrates." Those classes are used as substrates in some reactions as a /way of defining reactions that operate on classes of compounds. Such /generic substrates often have class names beginning with "a", such as /"a fatty acid" or "a 2-oxo acid". / // UNIQUE-ID - Compounds-Holder-Class TYPES - Compounds TYPES - Holder-Class COMMON-NAME - a nonspecific small molecule // UNIQUE-ID - Polynucleotide-Enzyme-Substrates TYPES - Polymer-Segment-Enzyme-Substrates // UNIQUE-ID - General-Methyl-Protein-Substrates TYPES - Holder-Class COMMON-NAME - a methylated protein COMMENT - This class stands for general methylated protein substrates, to be used in general reactions such as protein methylation. // UNIQUE-ID - General-Phos-Protein-Substrates TYPES - Holder-Class COMMON-NAME - a phosphoprotein COMMENT - This class stands for general phosphorylated protein substrates, to be used in general reactions such as protein phosphorylation. // UNIQUE-ID - General-Protein-Substrates TYPES - Proteins TYPES - Holder-Class COMMON-NAME - a protein COMMENT - This class stands for general protein substrates, to be used in general reactions such as protein phosphorylation. It is not the same as the super class Proteins, which includes all proteins in the database. // UNIQUE-ID - General-RNA-Substrates TYPES - Holder-Class TYPES - RNA COMMON-NAME - an RNA COMMENT - This class stands for general RNA substrates, to be used in general reactions such as RNA splicing. It is not the same as the super class RNA, which includes all RNAs in the database. // UNIQUE-ID - Polynucleotide-Holder TYPES - Polynucleotides TYPES - Holder-Class COMMON-NAME - a polynucleotide // UNIQUE-ID - Complexes TYPES - Macromolecules COMMON-NAME - a complex COMMENT - Complexes are aggregates of multiple macromolecules of different types, such as /DNA-protein complexes, or such as the ribosome. / // UNIQUE-ID - Polynucleotides TYPES - Macromolecules COMMON-NAME - a polynucleotide // UNIQUE-ID - Proteins TYPES - Macromolecules COMMON-NAME - a protein COMMENT - This class defines all proteins, be they monomers or multimers. // UNIQUE-ID - EV-AS-HYPO TYPES - EV-AS COMMON-NAME - Author hypothesis COMMENT - Author hypothesis. The hypothesis is in a publication, but it was clearly indicated in the /publication that there was no experimental evidence, or limited evidence, supporting the /hypothesis. This code can be used, for example, for "paper chemistry" metabolic pathways, /which are pathways drawn from the author's best estimation. / // UNIQUE-ID - EV-AS-NAS TYPES - EV-AS COMMON-NAME - Non-traceable author statement COMMENT - Non-traceable author statement. The assertion was made in a publication such as a review, a meeting abstract, /or another database without a reference to a publication describing an experiment that supports the assertion. // UNIQUE-ID - EV-AS-TAS TYPES - EV-AS COMMON-NAME - Traceable author statement COMMENT - Traceable author statement. The assertion was made in a publication -- such as a review or /in another database -- that itself did not describe an experiment supporting the /assertion. The statement referenced another publication that supported the assertion, /but it is unclear whether that publication described an experiment that supported /the assertion. The difference between the codes EV-EXP-TAS and EV-AS-TAS /is that the former code is used when it is certain that experimental evidence supports the /assertion, and the latter code is used when there is a possibility that an experiment was /not done to support the assertion. /In general, references to the primary literature are preferred, /but this code can be used when the original article is difficult to locate. // UNIQUE-ID - EV-COMP-AINF TYPES - EV-COMP COMMON-NAME - Inferred computationally without human oversight COMMENT - Automated inference. A computer inferred this assertion through one of many possible methods such as /sequence similarity, recognized motifs or consensus sequence, etc. When a person made the inference /from computational evidence, use EV-HINF // UNIQUE-ID - EV-COMP-HINF TYPES - EV-COMP COMMON-NAME - Inferred by a human based on computational evidence COMMENT - Human inference. A curator or author inferred this assertion after review of one or more possible types /of computational evidence such as sequence similarity, recognized motifs or consensus sequence, etc. /When the inference was made by a computer in an automated fashion, use EV-AINF. // UNIQUE-ID - EV-EXP-IDA TYPES - EV-EXP COMMON-NAME - Inferred from direct assay COMMENT - IDA inferred from direct assay.
/The assertion was inferred from a direct experimental assay such as / // UNIQUE-ID - EV-EXP-IEP TYPES - EV-EXP COMMON-NAME - Inferred from expression pattern COMMENT - IEP inferred from expression pattern.
/The assertion was inferred from a pattern of expression data such as / // UNIQUE-ID - EV-EXP-IGI TYPES - EV-EXP COMMON-NAME - Inferred from genetic interaction COMMENT - IGI inferred from genetic interaction.
/The assertion was inferred from a genetic interaction such as /

/This category includes any combination of alterations in the sequence /(mutation) or expression of more than one gene/gene product. This /category can therefore cover any of the IMP experiments that are done /in a non-wild-type background, although we prefer to use it only when /all mutations are documented. When redundant copies of a gene must all /be mutated to see an informative phenotype, use the IGI code. (Yes, /this implies some organisms, such as mouse, will have far, far more IGI /than IMP annotations.)

/ /IMP also covers phenotypic similarity: a phenotype that is informative /because it is similar to that of another independent phenotype (which /may have been described earlier or documented more fully) is IMP (not IGI).

/ /We have also decided to use this category for situations where a /mutation in one gene (gene A) provides information about the function, /process, or component of another gene (gene B; i.e. annotate gene B /using IGI). / // UNIQUE-ID - EV-EXP-IMP TYPES - EV-EXP COMMON-NAME - Inferred from mutant phenotype COMMENT - IMP inferred from mutant phenotype.
/The assertion was inferred from a mutant phenotype such as /

/Comment: Inferences made from examining mutations or /abnormal levels of only the product(s) of the gene of interest are covered by code EV-IMP /(compare to code EV-IGI). Use this code for experiments that use antibodies /or other specific inhibitors of RNA or protein activity, even though no /gene may be mutated (the rationale is that EV-IMP is used where an /abnormal situation prevails in a cell or organism). / // UNIQUE-ID - EV-EXP-IPI TYPES - EV-EXP COMMON-NAME - Inferred from physical interaction COMMENT - IPI inferred from physical interaction
/The assertion was inferred from a physical interaction such as /

/This code covers physical interactions between the gene product of /interest and another molecule (or ion, or complex). For functions such /as protein binding or nucleic acid binding, a binding assay is /simultaneously IPI and IDA; IDA is preferred because the assay /directly detects the binding. For both IPI and IGI, it would be good /practice to qualify them with the gene/protein/ion. / // UNIQUE-ID - EV-EXP-TAS TYPES - EV-EXP COMMON-NAME - Traceable author statement to experimental support COMMENT - Traceable author statement to experimental support. The assertion was made in a publication -- such as a review or /in another database -- that itself did not describe an experiment supporting the /assertion. However, the statement did reference another publication describing an experiment /that supports the assertion. The difference between the codes EV-EXP-TAS and EV-AS-TAS /is that the former code is used when it is certain that experimental evidence supports the /assertion, and the latter code is used when there is a possibility that an experiment was /not done to support the assertion. /In general, references to the primary literature are preferred, /but this code can be used when the original article is difficult to locate. // UNIQUE-ID - EV-IC-ADJ-GENES-SAME-BIO-PROCESS TYPES - EV-IC COMMON-NAME - Products of adjacent genes in the same biological process COMMENT - A transcription unit is inferred because there is a set of adjacent genes, /encoded in the same direction, coding for products that participate in the /same metabolic pathway or biological process. Sometimes, these genes code /for subunits of the same protein. // UNIQUE-ID - GO:0001608 TYPES - GO:0001584 COMMON-NAME - nucleotide receptor activity, G-protein coupled SYNONYMS - G protein coupled nucleotide receptor activity SYNONYMS - G-protein-coupled nucleotide receptor activity SYNONYMS - nucleotide receptor activity, G protein coupled // UNIQUE-ID - GO:0001615 TYPES - GO:0001584 COMMON-NAME - thyrotropin releasing hormone and secretagogue-like receptors activity // UNIQUE-ID - GO:0001619 TYPES - GO:0001584 TYPES - GO:0045125 COMMON-NAME - lysosphingolipid and lysophosphatidic acid receptor activity // UNIQUE-ID - GO:0001621 TYPES - GO:0001584 COMMON-NAME - platelet ADP receptor activity SYNONYMS - K101 receptor // UNIQUE-ID - GO:0004949 TYPES - GO:0001584 COMMON-NAME - cannabinoid receptor activity SYNONYMS - cannaboid receptor // UNIQUE-ID - GO:0004953 TYPES - GO:0001584 COMMON-NAME - icosanoid receptor activity SYNONYMS - eicosanoid receptor activity // UNIQUE-ID - GO:0004974 TYPES - GO:0001584 COMMON-NAME - leukotriene receptor activity // UNIQUE-ID - GO:0004984 TYPES - GO:0001584 COMMON-NAME - olfactory receptor activity // UNIQUE-ID - GO:0004992 TYPES - GO:0001584 COMMON-NAME - platelet activating factor receptor activity SYNONYMS - PAF receptor activity // UNIQUE-ID - GO:0008227 TYPES - GO:0001584 COMMON-NAME - amine receptor activity SYNONYMS - biogenic amine receptor // UNIQUE-ID - GO:0008502 TYPES - GO:0001584 COMMON-NAME - melatonin receptor activity // UNIQUE-ID - GO:0008528 TYPES - GO:0001584 TYPES - GO:0001653 COMMON-NAME - peptide receptor activity, G-protein coupled SYNONYMS - G protein coupled peptide receptor activity SYNONYMS - G-protein coupled peptide receptor activity SYNONYMS - G-protein-coupled peptide receptor activity SYNONYMS - peptide receptor activity, G protein coupled // UNIQUE-ID - GO:0016500 TYPES - GO:0001584 COMMON-NAME - protein-hormone receptor activity // UNIQUE-ID - GO:0003774 TYPES - GO:0003674 COMMON-NAME - motor activity // UNIQUE-ID - GO:0003824 TYPES - GO:0003674 COMMON-NAME - catalytic activity SYNONYMS - enzyme activity // UNIQUE-ID - GO:0005198 TYPES - GO:0003674 COMMON-NAME - structural molecule activity // UNIQUE-ID - GO:0005215 TYPES - GO:0003674 COMMON-NAME - transporter activity SYNONYMS - small-molecule carrier or transporter SYNONYMS - peroxisomal membrane transporter // UNIQUE-ID - GO:0005488 TYPES - GO:0003674 COMMON-NAME - binding COMMENT - For ligands that bind to signal transducing receptors, consider the molecular function term 'receptor binding ; GO:0005102' and its children. SYNONYMS - ligand // UNIQUE-ID - GO:0009055 TYPES - GO:0003674 COMMON-NAME - electron carrier activity // UNIQUE-ID - GO:0015457 TYPES - GO:0003674 COMMON-NAME - auxiliary transport protein activity // UNIQUE-ID - GO:0016209 TYPES - GO:0003674 COMMON-NAME - antioxidant activity // UNIQUE-ID - GO:0016530 TYPES - GO:0003674 COMMON-NAME - metallochaperone activity // UNIQUE-ID - GO:0030188 TYPES - GO:0003674 COMMON-NAME - chaperone regulator activity // UNIQUE-ID - GO:0030234 TYPES - GO:0003674 COMMON-NAME - enzyme regulator activity SYNONYMS - enzyme modulator // UNIQUE-ID - GO:0030528 TYPES - GO:0003674 COMMON-NAME - transcription regulator activity // UNIQUE-ID - GO:0031386 TYPES - GO:0003674 COMMON-NAME - protein tag SYNONYMS - protein tagging activity SYNONYMS - ubiquitin // UNIQUE-ID - GO:0042056 TYPES - GO:0003674 COMMON-NAME - chemoattractant activity SYNONYMS - attractant // UNIQUE-ID - GO:0045182 TYPES - GO:0003674 COMMON-NAME - translation regulator activity // UNIQUE-ID - GO:0045499 TYPES - GO:0003674 COMMON-NAME - chemorepellent activity SYNONYMS - chemorepellant activity // UNIQUE-ID - GO:0045735 TYPES - GO:0003674 COMMON-NAME - nutrient reservoir activity COMMENT - Note that this term can be used in place of the obsolete terms 'storage protein ; GO:0005187' and 'storage protein of fat body (sensu Insecta) ; GO:0008041'. SYNONYMS - storage protein SYNONYMS - storage protein of fat body (sensu Insecta) SYNONYMS - yolk protein // UNIQUE-ID - GO:0060089 TYPES - GO:0003674 COMMON-NAME - molecular transducer activity // UNIQUE-ID - GO:0005623 TYPES - GO:0005575 COMMON-NAME - cell // UNIQUE-ID - GO:0032991 TYPES - GO:0005575 COMMON-NAME - macromolecular complex SYNONYMS - macromolecule complex // UNIQUE-ID - GO:0043226 TYPES - GO:0005575 COMMON-NAME - organelle // UNIQUE-ID - GO:0044422 TYPES - GO:0005575 COMMON-NAME - organelle part // UNIQUE-ID - GO:0044464 TYPES - GO:0005575 COMMON-NAME - cell part // UNIQUE-ID - GO:0007582 TYPES - GO:0008150 COMMON-NAME - physiological process // UNIQUE-ID - GO:0008152 TYPES - GO:0008150 COMMON-NAME - metabolic process COMMENT - Note that metabolic processes do not include single functions or processes such as protein-protein interactions, protein-nucleic acids, nor receptor-ligand interactions. SYNONYMS - metabolic process // UNIQUE-ID - GO:0009987 TYPES - GO:0008150 COMMON-NAME - cellular process // UNIQUE-ID - GO:0010926 TYPES - GO:0008150 COMMON-NAME - anatomical structure formation COMMENT - Note that, for example, the formation of a pseudopod in an amoeba would not be considered formation involved in morphogenesis because it would not be thought of as the formation of an anatomical structure that was part of the shaping of the amoeba during its development. The formation of an axon from a neuron would be considered the formation of an anatomical structure involved in morphogenesis because it contributes to the creation of the form of the neuron in a developmental sense. // UNIQUE-ID - GO:0016043 TYPES - GO:0008150 COMMON-NAME - cellular component organization // UNIQUE-ID - GO:0032501 TYPES - GO:0008150 COMMON-NAME - multicellular organismal process SYNONYMS - organismal physiological process // UNIQUE-ID - GO:0032502 TYPES - GO:0008150 COMMON-NAME - developmental process SYNONYMS - development // UNIQUE-ID - GO:0044085 TYPES - GO:0008150 COMMON-NAME - cellular component biogenesis // UNIQUE-ID - GO:0050896 TYPES - GO:0008150 COMMON-NAME - response to stimulus // UNIQUE-ID - GO:0051234 TYPES - GO:0008150 COMMON-NAME - establishment of localization // UNIQUE-ID - GO:0065007 TYPES - GO:0008150 COMMON-NAME - biological regulation SYNONYMS - regulation // UNIQUE-ID - GO:0071554 TYPES - GO:0008150 COMMON-NAME - cell wall organization or biogenesis SYNONYMS - cell wall organisation or biogenesis // UNIQUE-ID - Biosynthesis TYPES - Pathways COMMON-NAME - Biosynthesis COMMENT - This class contains pathways that constitute a cell's complete spectrum of biosynthetic capacities, including the routes of synthesis of small molecules, macromolecules and organelles. / // UNIQUE-ID - Degradation TYPES - Pathways COMMON-NAME - Degradation/Utilization/Assimilation COMMENT - This class contains pathways by which various organisms degrade substrates to serve as sources of nutrients and energy, utilize exogenous sources of essential metabolites, or assimilate certain sources of essential bioelements. / SYNONYMS - Assimilation SYNONYMS - Utilization // UNIQUE-ID - Detoxification TYPES - Pathways COMMENT - This class contains pathways by which various organisms protect themselves /against the harmful effects of toxic compounds. /The sole purpose of these pathways is to avoid toxicity, with no other /benefit (such as energy or useful metabolites) to the organism. // UNIQUE-ID - Energy-Metabolism TYPES - Pathways COMMON-NAME - Generation of precursor metabolites and energy COMMENT - This class contains the pathways of central metabolism (glycolysis, pentose phosphate pathways, and TCA cycle), which collectively produce the 13 starting materials, sometimes termed precursor metabolites, for all cellular biosyntheses. Other degradative pathways, sometimes termed feeder pathways, feed into central metabolism. This class also contains the pathways that generate energy under various conditions of growth. // UNIQUE-ID - Signaling-Pathways TYPES - Pathways COMMON-NAME - Signal transduction pathways COMMENT - Signalling pathways. // UNIQUE-ID - Super-Pathways TYPES - Pathways COMMON-NAME - Superpathways COMMENT - Pathways within this class are constructed by combining individual pathways /(elsewhere shown separately) to show relationships between them. /In some cases those individual pathways start from a common precursor, or /produce a common product, but they can have other relationships as well. /Superpathways can have individual reactions as their components in addition to /other pathways. Superpathways can be defined recursively, that is, the /component pathway of a Superpathway can be a base pathway or a child of /Superpathways. Most Superpathways will have an additional parent class /within the pathway ontology to define their biological role. // UNIQUE-ID - Transport-Pathways TYPES - Pathways COMMON-NAME - Transport Pathways // UNIQUE-ID - Reactions-Classified-By-Conversion-Type TYPES - Reactions COMMENT - This class is the root of an ontology in which reactions are classified by the type of /transition that occurs, whether by a change in covalent bonding, by a weak binding interaction, /or via a complex multistep process, etc. This reaction ontology is orthogonal to the classification /of reactions by substrate classes, that is, many reactions will have parents in both ontologies. / // UNIQUE-ID - Reactions-Classified-By-Substrate TYPES - Reactions COMMENT - This class is the root of an ontology in which reactions are classified according to /the class of their substrates. This classification scheme is orthogonal to the /classification by conversion type, that is, reactions will have parents in both /ontologies. / // UNIQUE-ID - Unclassified-Reactions TYPES - Reactions COMMON-NAME - Unclassified reactions COMMENT - Reactions that have not yet been classified either by substrate or by conversion type. // UNIQUE-ID - TAX-131567 TYPES - TAX-1 COMMON-NAME - cellular organisms SYNONYMS - biota // UNIQUE-ID - All-Genes TYPES - DNA-Segments COMMENT - The class All-Genes includes as its subclasses the set of true genes (class Genes), as /well as sets of gene-like sequences. The latter includes class Phantom-Genes /(sequences that were predicted to be genes by computational gene-finding /programs, but that were later determined not to be genes, such as through /experimentation), and class Pseudo-Genes. Therefore, to enumerate all true /genes in an organism, query the instances of class Genes, not class All-Genes. / // UNIQUE-ID - DNA-Binding-Sites TYPES - DNA-Segments COMMENT - This class defines DNA regions to which proteins bind, such as /transcription factor binding sites. Instances of this class need not /be components of a transcription unit. / // UNIQUE-ID - IS-Elements TYPES - DNA-Segments // UNIQUE-ID - Misc-Features TYPES - DNA-Segments // UNIQUE-ID - Promoters TYPES - DNA-Segments COMMENT - Instances of this class describe promoter regions. // UNIQUE-ID - Transcription-Units TYPES - DNA-Segments COMMENT - An instance of this class defines a transcription unit, meaning a set of one /or more genes that are transcribed to produce a single messenger RNA. /There is a one to one correspondence between transcription units and /promoters. The differences between a transcription unit and an operon /are (1) Technically, an operon must include more than one gene. /(2) An operon may include more than one promoter. For operons that /include multiple promoters, a transcription unit is defined for each promoter. / /A transcription unit should have as its components one or more genes, /one promoter, and one terminator. Transcription factor binding sites /need not be components of a transcription unit. / // UNIQUE-ID - Transposons TYPES - DNA-Segments // UNIQUE-ID - mRNA-Binding-Sites TYPES - mRNA-Segments COMMENT - This class defines regions on mRNA transcripts to which other objects, such as regulatory proteins or complementary sRNAs, bind. // UNIQUE-ID - Terminators TYPES - mRNA-Segments COMMENT - Transcription terminators. // UNIQUE-ID - Active-Peptides TYPES - Protein-Segments COMMENT - Extent of a released active peptide. // UNIQUE-ID - Chains TYPES - Protein-Segments COMMENT - Extent of a polypeptide chain in a mature protein // UNIQUE-ID - Conserved-Regions TYPES - Protein-Segments COMMENT - Describes protein regions share a high degree of sequence homology with similar regions in other proteins, but which cannot be definitively classified into any of the other feature classes. /This class can include both homology motifs and larger conserved regions. // UNIQUE-ID - Propeptides TYPES - Protein-Segments COMMENT - The part of a protein that is proteolytically cleaved during the protein's /maturation, e.g. the internal residues of proinsulin, the N-terminal residues of /pepsinogen. The term is usually not used for a signal peptides, but for the /peptides removed from protein precursors that can be isolated and that have a /reasonably long half-life. // UNIQUE-ID - Protein-Binding-Regions TYPES - Protein-Segments TYPES - Protein-Binding-Features // UNIQUE-ID - Protein-Structure-Regions TYPES - Protein-Segments COMMENT - Segments of a protein that are involved in protein structure levels above the primary structure, such as beta strands or coiled-coils. // UNIQUE-ID - Repeats TYPES - Protein-Segments COMMENT - Extent of an internal sequence repetition // UNIQUE-ID - Sequence-Variants TYPES - Protein-Segments COMMENT - Variations of the protein sequence due to intrinsic, extrinsic, or experimental factors. // UNIQUE-ID - Signal-Sequences TYPES - Protein-Segments COMMENT - The N-terminal portion of a secretory or membrane protein that assists it /across the membrane of the rough endoplasmic reticulum, where it is /synthesized, but is cleaved from the protein even before the synthesis of the /protein is complete. Mitochondrial and chloroplast proteins that are synthesized /on ribosomes also have signal sequences that target them to their organelle; /these may be N-terminal or internal, and may or may not be removed by /proteolysis. // UNIQUE-ID - Transit-Peptides TYPES - Protein-Segments COMMENT - In the case of post-translationally imported mitochondrial and chloroplast proteins(synthesized in the cytoplasm), an amino terminal /sequence which contains targeting information and is removed during or shortly after import into the organelles. // UNIQUE-ID - Transmembrane-Regions TYPES - Protein-Segments COMMENT - A feature of most intrinsic proteins of plasma or vesicular membranes; a /polypeptide sequence of about seven residues if beta-sheet, up to 22 residues if /alpha-helix, that connects extracellular to intracellular domains, joined by /extended polypeptides on the cytoplasmic and external or vesicular sides. /Receptor and ion channels have between one and twelve such domains. // UNIQUE-ID - Zn-Finger-Regions TYPES - Protein-Segments COMMENT - A motif of which seven or more may appear in a DNA-binding protein. Each is /characterized by two closely spaced cysteine and two histidine residues that /serve as ligands for a single Zn2+. When bound to Zn2+ they form a module /from which protrude amino acid side chains that interact with the bases /partially exposed to the DNA major groove. Since in the area of contact there is /a limited and local parallel of DNA and protein sequences, the occurrence of the /contacting amino acid residues in the protein sequence falls into a regularity, or /register, that creates in the protein a syllabicity. // UNIQUE-ID - Active-Sites TYPES - Amino-Acid-Sites COMMENT - Amino acid(s) within the active site of an enzyme. // UNIQUE-ID - Amino-Acid-Sites-That-Bind TYPES - Amino-Acid-Sites TYPES - Protein-Binding-Features COMMENT - This class describes /specific residues of a polypeptide to which some ligand binds (covalently or otherwise). // UNIQUE-ID - Cleavage-of-Initial-Methionine TYPES - Amino-Acid-Sites COMMENT - Proteins with this feature have their initial methionine cleaved post-translationally. // UNIQUE-ID - Crosslink-Sites TYPES - Amino-Acid-Sites // UNIQUE-ID - Modified-Residues TYPES - Amino-Acid-Sites COMMENT - A site on a polypeptide in which a single residue is covalently modified // UNIQUE-ID - Selenocysteine-sites TYPES - Amino-Acid-Sites COMMENT - This site contains a selenocysteine residue // UNIQUE-ID - Interchain-Crosslinks TYPES - Crosslink-Sites TYPES - Protein-Binding-Features COMMENT - A bond is formed between the one specified amino acid residue on this chain /and an amino acid residue on another chain. The value of the ATTACHED-GROUP slot /should be another instance of Interchain-Crosslinks. // UNIQUE-ID - Regulation-of-Degradation TYPES - Regulation-of-Gene-Products // UNIQUE-ID - Regulation-of-Production TYPES - Regulation-of-Gene-Products // UNIQUE-ID - Regulation-of-Transcription-Initiation TYPES - Regulation-of-Transcription COMMENT - Instances of this class describe regulation of transcription initiation whereby the binding of an RNA-polymerase to /a transcription unit promoter is activated or inhibited by the binding of some entity (generally a transcription factor) to some nearby /DNA binding site. The regulator in this case is the transcription factor, and the regulated-entity is the transcription unit promoter /(although what is really being regulated is the transcription of the transcription unit to produce RNA). If no promoter has been identified /for a transcription unit, or no transcription unit for a regulated gene, it is possible to specify the transcription unit or the gene itself as the /regulated-entity instead of the promoter, although it is understood that these cases describe incomplete information. // UNIQUE-ID - Transcriptional-Attenuation TYPES - Regulation-of-Transcription COMMENT - This class describes the regulation of gene expression by transcription attenuation, or the premature termination of transcription. /In all cases, the regulated-entity will be a terminator, although if precise terminator information is unknown then this frame may /alternatively be linked to a transcription-unit or gene. When a terminator is specified, only genes in a transcription-unit that lie /downstream from the regulated terminator will have their expression regulated by instances of this class. / /Even though the regulated-entity may be a terminator, the value of the MODE slot refers to the overall effect on gene expression. /Thus, a regulator that blocks termination at a terminator is considered an activator, and the value of the MODE slot will be "+", /while a regulator that promotes termination is a repressor, with a value of "-" for the MODE slot. // UNIQUE-ID - Protein-Mediated-Translation-Regulation TYPES - Regulation-of-Translation // UNIQUE-ID - RNA-Mediated-Translation-Regulation TYPES - Regulation-of-Translation COMMENT - In this class of regulation, a small regulatory RNA binds to a roughly complementary region on the mRNA transcript (specified /in slot ASSOCIATED-BINDING-SITE), possibly with the aid of one or more accessory proteins (specified in slot /ACCESSORY-PROTEINS), to regulate translation. Regulation may be by directly interfering with translation (for example, /by directly blocking or by inducing some change in secondary structure that blocks or unblocks the ribosome binding site), by /causing (or preventing) the mRNA to be targeted for degradation, or by some combination of the two. The MECHANISM slot /is used to indicate which of the above two mechanisms of action are involved, if known. If a specific RNAse is specified /in slot ASSOCIATED-RNASE, then the sRNA targets the mRNA to be degraded by that particular RNAse. / /In instances of this class, the regulated entity will be a transcription unit, since the transcription unit defines the mRNA transcript /whose translation is being regulated. The regulator will be an sRNA. // UNIQUE-ID - CCO-PLASTID-ENV TYPES - CCO-ORGANEL-ENV COMMON-NAME - plastid envelope // UNIQUE-ID - CCO-PM-BACTERIA TYPES - CCO-PLASMA-MEM COMMON-NAME - plasma membrane (sensu Bacteria) SYNONYMS - cell membrane SYNONYMS - cytoplasmic membrane SYNONYMS - plasmalemma // UNIQUE-ID - CCO-CHLOR-MEM TYPES - CCO-PLASTID-MEM COMMON-NAME - chloroplast membrane COMMENT - This term does not include the intermembrane space. // UNIQUE-ID - CCO-CHROM-MEM TYPES - CCO-PLASTID-MEM COMMON-NAME - chromoplast membrane COMMENT - This term does not include the intermembrane space. // UNIQUE-ID - CCO-PLAST-IMEM TYPES - CCO-PLASTID-MEM COMMON-NAME - plastid inner membrane // UNIQUE-ID - CCO-PLAST-OMEM TYPES - CCO-PLASTID-MEM COMMON-NAME - plastid outer membrane // UNIQUE-ID - CCO-ENDOSOME TYPES - CCO-MEM-ORG COMMON-NAME - endosome // UNIQUE-ID - CCO-ER TYPES - CCO-MEM-ORG COMMON-NAME - endoplasmic reticulum SYNONYMS - ER // UNIQUE-ID - CCO-MICROBODY TYPES - CCO-MEM-ORG COMMON-NAME - microbody // UNIQUE-ID - CCO-PLASTID TYPES - CCO-MEM-ORG COMMON-NAME - plastid // UNIQUE-ID - CCO-VACUOLE TYPES - CCO-MEM-ORG COMMON-NAME - vacuole // UNIQUE-ID - CCO-VESICLE TYPES - CCO-MEM-ORG COMMON-NAME - vesicle // UNIQUE-ID - CCO-CHLOR-THY TYPES - CCO-PLAST-THY COMMON-NAME - chloroplast thylakoid // UNIQUE-ID - CCO-CW-BAC TYPES - CCO-CELLWALL COMMON-NAME - cell wall (sensu Bacteria) // UNIQUE-ID - CCO-CW-PLANT TYPES - CCO-CELLWALL COMMON-NAME - cell wall (sensu Magnoliophyta) // UNIQUE-ID - Elements TYPES - All-Elements COMMON-NAME - an element COMMENT - The chemical elements. // UNIQUE-ID - 1-Haloalkanes TYPES - Compounds COMMON-NAME - a 1-haloalkane // UNIQUE-ID - 12-EPOXYPROPANE TYPES - Compounds COMMON-NAME - a 1,2-epoxypropane // UNIQUE-ID - 14-ALPHA-D-GALACTURONIDE TYPES - Compounds COMMON-NAME - 1,4-α-D-galacturonide // UNIQUE-ID - 2-3-Butanediols TYPES - Compounds COMMON-NAME - a 2,3-butanediol COMMENT - 2,3-butanediol is of commercial interest, mostly as an antifreeze agent due to to its low freezing point /|CITS: [Magee87]|. One of its well known applications is the formation of methyl ethyl ketone, /by dehydration, which can be used as a liquid fuel additive |CITS: [11234948]|. /All three stereo isomer of 2,3-butanediol can be produced by various organisms |CITS: [11687934]|. / / /The metabolic function of 2,3-butanediol is not yet known, although it may play a role in preventing intracellular /acidification by changing the metabolism from acid production to the formation of a neutral compound /|CITS: [6298028]|. /In addition, the |FRAME: P125-PWY| pathway might participate in regulation of the NADH/NAD+ ratio. /in the bacteria |CITS: [8444801]| . SYNONYMS - a butane-2,3-diol SYNONYMS - a 2,3-butylene glycol // UNIQUE-ID - 2-HYDROXYGLUTARIC_ACID TYPES - Compounds COMMON-NAME - 2-hydroxyglutarate SYNONYMS - 2-hydroxyglutaric acid SYNONYMS - α-hydroxyglutarate SYNONYMS - α-hydroxy-glutarate SYNONYMS - 2-hydroxypentanedioic acid // UNIQUE-ID - 2-OXINDOLE-3-ACETYL-HEXOSE TYPES - Compounds COMMON-NAME - a 2-oxindole-3-acetyl-hexose // UNIQUE-ID - 3-CARBAMOYLOXYMETHYLCEPHEM TYPES - Compounds COMMON-NAME - a 3-carbamoyloxymethylcephem // UNIQUE-ID - 3-terminal-unsaturated-sugars TYPES - Compounds COMMON-NAME - a 3'-terminal unsaturated sugar // UNIQUE-ID - 5-10-METHENYL-THF-GLU-N TYPES - Compounds COMMON-NAME - a 5,10-methenyltetrahydrofolate SYNONYMS - a 5,10-methenyl-THF // UNIQUE-ID - 5-L-GLUTAMYL-L-AMINO-ACID TYPES - Compounds COMMON-NAME - a 5-L-glutamyl-L-amino acid SYNONYMS - an L-γ-glutamyl-L-amino acid // UNIQUE-ID - 6-Hydroxy-37-dimethyloctanoate TYPES - Compounds COMMON-NAME - a 6-hydroxy-3,7-dimethyloctanoate // UNIQUE-ID - 7-METHYLGUANOSINE-ETCETERA-POLYNUCLEOTID TYPES - Compounds COMMON-NAME - a 7-methylguanosine 5'-triphospho-5'-polynucleotide // UNIQUE-ID - A-FATTY-ALCOHOL TYPES - Compounds COMMON-NAME - a fatty alcohol // UNIQUE-ID - A-GLYCEROL-ESTER TYPES - Compounds COMMON-NAME - a glycerol ester // UNIQUE-ID - a-long-chain-alcohol TYPES - Compounds COMMON-NAME - a long-chain alcohol // UNIQUE-ID - a-long-chain-ester TYPES - Compounds COMMON-NAME - a long-chain ester // UNIQUE-ID - ACETYL-GLUCOSAMINYL-ETCETERA-MANNOSYL-R TYPES - Compounds COMMON-NAME - N-acetyl-β-D-glucosaminyl-1,2-α-D-mannosyl-1,6-(N-acetyl-β-D-glucosaminyl-1,2-α-D-mannosyl-1,3)-β-D-mannosyl-R COMMENT - R represents the remainder of the N-linked oligosaccharide in the glycoprotein acceptor. // UNIQUE-ID - Acids TYPES - Compounds COMMON-NAME - an acid COMMENT - This special compound collects under one roof a number of synonyms that occur in the ENZYME db v.23. SYNONYMS - a carboxylate SYNONYMS - a carboxylic anion SYNONYMS - acid SYNONYMS - RCOOH // UNIQUE-ID - Acyl-Phosphates TYPES - Compounds COMMON-NAME - an acyl phosphate // UNIQUE-ID - Acylcholines TYPES - Compounds COMMON-NAME - an acylcholine // UNIQUE-ID - Alcohols TYPES - Compounds COMMON-NAME - an alcohol SYNONYMS - an alcohol SYNONYMS - alcohol SYNONYMS - ROH // UNIQUE-ID - Aldehydes-Or-Ketones TYPES - Compounds COMMON-NAME - an aldehyde or ketone SYNONYMS - aldehyde or ketone // UNIQUE-ID - Aliphatic-Nitriles TYPES - Compounds COMMON-NAME - an aliphatic nitrile // UNIQUE-ID - Alkyl-Hydro-Peroxides TYPES - Compounds COMMON-NAME - an alkylhydroperoxide COMMENT - This compound class stands for generic and unspecified alkylhydroperoxides. SYNONYMS - ROOH // UNIQUE-ID - Alkyl-Sulfenates TYPES - Compounds COMMON-NAME - an S-alkylsulfenate SYNONYMS - an alkyl sulfenate // UNIQUE-ID - All-Amines TYPES - Compounds COMMON-NAME - an amine COMMENT - Amines are derivatives of |FRAME: AMMONIA|, with one or more of the hydrogen atoms replaced by /organic substituents such as alkyl and aryl groups. // UNIQUE-ID - All-Amino-Acids TYPES - Compounds COMMON-NAME - an amino acid or its derivative COMMENT - This class includes all amino acids, including those not naturally used in /proteins, as well as derivatives of amino acids. / // UNIQUE-ID - All-Carbohydrates TYPES - Compounds COMMON-NAME - all carbohydrates // UNIQUE-ID - All-Nucleosides TYPES - Compounds COMMON-NAME - a nucleic acid component COMMENT - This class includes several classes of compounds that form components /of nucleic acids, and serves as a way of grouping those classes together. /It does not strictly speaking define a structurally defined set of compounds. / // UNIQUE-ID - Alpha-Keto-Acids TYPES - Compounds COMMON-NAME - a α keto acid // UNIQUE-ID - ALPHA-SIALYL-GROUPS TYPES - Compounds COMMON-NAME - an α-sialyl group // UNIQUE-ID - Amides TYPES - Compounds COMMON-NAME - an amide // UNIQUE-ID - AMINOACYL-PHOSPHATIDYLGLYCEROL TYPES - Compounds COMMON-NAME - an aminoacyl-phosphatidylglycerol // UNIQUE-ID - aprimaryalcohol TYPES - Compounds COMMON-NAME - a primary alcohol SYNONYMS - 1-Alcohol // UNIQUE-ID - Aromatics TYPES - Compounds COMMON-NAME - an aromatic compound COMMENT - This is a collection place for many aromatic compounds that can occur in toxic chemical waste, and are degraded by some microbes. // UNIQUE-ID - BETA-D-GALACTOSYL-R TYPES - Compounds COMMON-NAME - a β-D-galactosyl-R // UNIQUE-ID - CAPSULAR-POLYSACCHARIDES TYPES - Compounds COMMON-NAME - a capsular polysaccharide // UNIQUE-ID - CDP-2-3-4-Saturated-Diacylglycerols TYPES - Compounds COMMON-NAME - a CDP-2,3,4-saturated-diacylglycerol SYNONYMS - CDP-diglyceride SYNONYMS - CDP-1,2-diglyceride SYNONYMS - CDP-1,2-diacylglycerol // UNIQUE-ID - CDPDIACYLGLYCEROL TYPES - Compounds COMMON-NAME - a CDP-diacylglycerol SYNONYMS - CDP-diglyceride SYNONYMS - CDP-1,2-diglyceride SYNONYMS - CDP-1,2-diacylglycerol // UNIQUE-ID - CHITIN TYPES - Compounds COMMON-NAME - chitin COMMENT - Chitin is a long-chain polymer of a |FRAME: N-ACETYL-D-GLUCOSAMINE|, and is an abundant /biopolymer. /It is the main component of the cell walls of fungi, the exoskeletons of arthropods, such as crustaceans /and the insects, the radula of mollusks and the beaks of the cephalopods. // UNIQUE-ID - Chitosan TYPES - Compounds COMMON-NAME - chitosan COMMENT - Chitosan is a linear polysaccharide composed of randomly distributed β-(1-4)-linked D-glucosamine /and N-acetyl-D-glucosamine units. /Chitosan is found in the cell walls of some phytopathogenic fungi, but is mostly produced commercially /by deacetylation of |FRAME: CHITIN| , which is the structural /element in the exoskeleton of crustaceans. SYNONYMS - β-1,4-Poly-D-glucosamine // UNIQUE-ID - Chondroitin-sulfates TYPES - Compounds COMMON-NAME - chondroitin-sulfate // UNIQUE-ID - Cinnamoyl-CoAs TYPES - Compounds COMMON-NAME - a cinnamoyl-CoA // UNIQUE-ID - Cleaved-DNA TYPES - Compounds COMMON-NAME - Cleaved DNA // UNIQUE-ID - Cofactors TYPES - Compounds COMMON-NAME - a cofactor // UNIQUE-ID - CPD-10156 TYPES - Compounds COMMON-NAME - a N-acetyl-D-glucosaminyl-polyepetide // UNIQUE-ID - CPD-10464 TYPES - Compounds COMMON-NAME - an α 2,8-linked polymer of sialate SYNONYMS - α-2,8-Linked polymer of sialic acid // UNIQUE-ID - CPD-10465 TYPES - Compounds COMMON-NAME - a polysialic acid acetylated at O-7 // UNIQUE-ID - CPD-10572 TYPES - Compounds COMMON-NAME - a fluorobenzoates // UNIQUE-ID - CPD-11434 TYPES - Compounds COMMON-NAME - a sulfoxide // UNIQUE-ID - CPD-11926 TYPES - Compounds COMMON-NAME - a oligomycin // UNIQUE-ID - CPD-11927 TYPES - Compounds COMMON-NAME - a venturicidin // UNIQUE-ID - CPD-12086 TYPES - Compounds COMMON-NAME - a PchE NRPS protein loaded with salycilate and L-cysteine SYNONYMS - PchE-salycilate-cysteine // UNIQUE-ID - CPD-12087 TYPES - Compounds COMMON-NAME - a PchF NRPS protein loaded with L-cysteine SYNONYMS - cysteine-S-PchF // UNIQUE-ID - CPD-12088 TYPES - Compounds COMMON-NAME - a PchE NRPS protein loaded with hydroxyphenyl-thiazoline SYNONYMS - hydroxyphenyl-thiazolinyl-S-PchE SYNONYMS - dihydroaeruginoyl--S-PchE // UNIQUE-ID - CPD-12089 TYPES - Compounds COMMON-NAME - a PchF protein loaded with hydroxyphenyl-4,2-bis-thiazoline SYNONYMS - hydroxyphenyl-4,2-bis-thiazolinyl-S-PchF // UNIQUE-ID - CPD-12090 TYPES - Compounds COMMON-NAME - a PchF protein loaded with N-desmethyl-pyochelin SYNONYMS - N-desmethyl-pyochelin-S-PchF // UNIQUE-ID - CPD-12091 TYPES - Compounds COMMON-NAME - a PchF NRPS protein loaded with pyochelin SYNONYMS - pyochelinyl-S-PchF // UNIQUE-ID - CPD-12092 TYPES - Compounds COMMON-NAME - a PchE NRPS protein loaded with L-cysteine SYNONYMS - PchE-S-cysteine // UNIQUE-ID - CPD-12106 TYPES - Compounds COMMON-NAME - a pentaglycine cross-bridge of peptidoglycan // UNIQUE-ID - CPD-12107 TYPES - Compounds COMMON-NAME - a protein with LPXT - pentaglycine cross-bridge of peptidoglycan // UNIQUE-ID - CPD-12109 TYPES - Compounds COMMON-NAME - a protein with NXTN - pentaglycine cross-bridge of peptidoglycan // UNIQUE-ID - CPD-160 TYPES - Compounds COMMON-NAME - a phosphatidyl-N-dimethylethanolamine // UNIQUE-ID - CPD-405 TYPES - Compounds COMMON-NAME - a phosphatidyl-N-methylethanolamine // UNIQUE-ID - CPD-598 TYPES - Compounds COMMON-NAME - (-)-ureidoglycine // UNIQUE-ID - CPD-7177 TYPES - Compounds COMMON-NAME - a heparan sulfate α-D-glucosaminide SYNONYMS - heparan sulfate a-D-glucosaminide // UNIQUE-ID - CPD-7178 TYPES - Compounds COMMON-NAME - a heparan sulfate N-acetyl-α-D-glucosaminide SYNONYMS - heparan sulfate N-acetyl-a-D-glucosaminide // UNIQUE-ID - CPD-7213 TYPES - Compounds COMMON-NAME - a [heparan sulfate]-N-sulfoglucosamine // UNIQUE-ID - CPD-8526 TYPES - Compounds COMMON-NAME - xyloglucan oligosaccharide SYNONYMS - a xyloglucan oligosaccharide // UNIQUE-ID - CPD-8540 TYPES - Compounds COMMON-NAME - α-D-glucosyl-protein // UNIQUE-ID - CPD-8548 TYPES - Compounds COMMON-NAME - a D-threo-aldose // UNIQUE-ID - CPD-8549 TYPES - Compounds COMMON-NAME - a D-threo-aldono-1,5-lactone // UNIQUE-ID - CPD-8550 TYPES - Compounds COMMON-NAME - a substituted β-amino acid // UNIQUE-ID - CPD-8575 TYPES - Compounds COMMON-NAME - a 4-hydroxyacid SYNONYMS - a 4-hydroxyalkanoic acid SYNONYMS - a 4-hydroxycarboxlic acid // UNIQUE-ID - CPD-8630 TYPES - Compounds COMMON-NAME - a (5')ppPur-mRNA // UNIQUE-ID - CPD-8631 TYPES - Compounds COMMON-NAME - a G(5')ppPur-mRNA // UNIQUE-ID - CPD0-1027 TYPES - Compounds COMMON-NAME - a debranched limit dextrin COMMENT - |FRAME: CPD0-971| is the name given to the highly-branched core of the polysaccharide fragments /remaining at the end (limit) of exhaustive hydrolysis of amylopectin or glycogen by α-1,4-glucan /hydrolase enzymes such as |FRAME: GLYCOPHOSPHORYL-CPLX| and /|FRAME: MALDEXPHOSPHORYL-CPLX|. /These enzymes shorten the chains, but are not able to hydrolyze the α-1,6 bonds at branch points, /forming |FRAME: Truncated-Limit-Dextrins|. /Following the action of the |FRAME: MONOMER-13683|, which completely removes the branching /chains, |FRAME: CPD0-1027| is formed. SYNONYMS - a debranched glycogen phosphorylase-limit dextrin SYNONYMS - a debranched glycogen phosphorylase-limited dextrin // UNIQUE-ID - CPD0-1228 TYPES - Compounds COMMON-NAME - a diazaborine COMMENT - Diazaboraines are hetrocyclic compounds containg one Boron and two nitrogen atoms. // UNIQUE-ID - CPD0-2122 TYPES - Compounds COMMON-NAME - a1-tetradec-7-enoyl-sn-glycerol 3-phosphate // UNIQUE-ID - CPD0-2134 TYPES - Compounds COMMON-NAME - a 2-acyl-sn-glycero-3-phosphoglycerol (n-C14:1) // UNIQUE-ID - CPD0-2137 TYPES - Compounds COMMON-NAME - a 1-hexadec-9-enoyl-sn-glycerol 3-phosphate // UNIQUE-ID - CPD0-2145 TYPES - Compounds COMMON-NAME - a 1-acyl-sn-glycero-3-phosphoglycerol (n-C18:1) // UNIQUE-ID - CPD0-2149 TYPES - Compounds COMMON-NAME - a 1-acyl-sn-glycero-3-phosphoethanolamine (n-C14:1) // UNIQUE-ID - CPD0-2150 TYPES - Compounds COMMON-NAME - a 1-acyl-sn-glycero-3-phosphoethanolamine (n-C18:1) // UNIQUE-ID - CPD0-2151 TYPES - Compounds COMMON-NAME - a 1-acyl-sn-glycero-3-phosphoethanolamine (n-C16:1) // UNIQUE-ID - CPD0-2157 TYPES - Compounds COMMON-NAME - a 1-acyl-sn-glycero-3-phosphoglycerol (n-C14:1) // UNIQUE-ID - CPD0-2169 TYPES - Compounds COMMON-NAME - a 1-acyl-sn-glycero-3-phosphoglycerol (n-C16:1) // UNIQUE-ID - CPD0-2170 TYPES - Compounds COMMON-NAME - a 2-acyl-sn-glycero-3-phosphoethanolamine (n-C14:1) // UNIQUE-ID - CPD0-2172 TYPES - Compounds COMMON-NAME - a 2-acyl-sn-glycero-3-phosphoglycerol (n-C16:1) // UNIQUE-ID - CPD0-2174 TYPES - Compounds COMMON-NAME - a 2-acyl-sn-glycero-3-phosphoethanolamine (n-C18:1) // UNIQUE-ID - CPD0-2179 TYPES - Compounds COMMON-NAME - an acyl phosphatidylglycerol (n-C18:1) // UNIQUE-ID - CPD0-2196 TYPES - Compounds COMMON-NAME - an acyl phosphatidylglycerol (n-C14:1) // UNIQUE-ID - CPD0-2198 TYPES - Compounds COMMON-NAME - an acyl phosphatidylglycerol (n-C16:1) // UNIQUE-ID - CPD0-2204 TYPES - Compounds COMMON-NAME - a 2-acyl-sn-glycero-3-phosphoethanolamine (n-C16:1) // UNIQUE-ID - CPD0-2220 TYPES - Compounds COMMON-NAME - a 1-octadec-11-enoyl-sn-glycerol 3-phosphate // UNIQUE-ID - CPD0-2229 TYPES - Compounds COMMON-NAME - a 2-acyl-sn-glycero-3-phosphoglycerol (n-C18:1) // UNIQUE-ID - CPD0-944 TYPES - Compounds COMMON-NAME - a rhamnosyl lipopolysaccharide // UNIQUE-ID - Cyanophycin TYPES - Compounds COMMON-NAME - cyanophycin COMMENT - Cyanophycin is a protein-like cell inclusion that is unique to cyanobacteria. It is a high-molecular /weight (25,000 to 100,000) copolymers of |FRAME: L-ASPARTATE| and |FRAME: ARG| stored in special /granules within the cell |CITS: [16591901]|. /The polymer contains aspartate acid and arginine in an equimolar ratio, and consists of a polyaspartic /acid backbone with arginine moieties linked to the β-carboxyl group of each aspartate by its /α-amino group. / /The polymer serves as a temporary nitrogen reserve, which accumulates during the transition from the /exponential- to the stationary-growth phase and disappears when balanced growth resumes. / / SYNONYMS - N-β-aspartylarginine SYNONYMS - [L-Asp(4-L-Arg)]n SYNONYMS - [L-4-(L-arginin-2-N-yl)aspartic acid]n SYNONYMS - poly{N4-[(1S)-1-carboxy-4-guanidinobutyl]-L-asparagine} SYNONYMS - multi-L-arginyl-poly [L-aspartic acid] // UNIQUE-ID - Cyanophycin-aspartate TYPES - Compounds COMMON-NAME - cyanophycin-L-aspartate COMMENT - This is an intermediate in |FRAME: Cyanophycin| biosynthesis, that exists for a short time, /after an |FRAME: L-ASPARTATE| has been added, but before the matching |FRAME:ARG| is added. SYNONYMS - [L-Asp(4-L-Arg)]n-L-Asp // UNIQUE-ID - D-aspartate-peptidoglycan TYPES - Compounds COMMON-NAME - [β-GlcNAc-(1-4)-Mur2Ac(oyl-L-Ala-γ-D-Glu-6-N-(β-D-Asp)-L-Lys-D-Ala-D-Ala)]n // UNIQUE-ID - D-Galactosylglycosaminoglycans TYPES - Compounds COMMON-NAME - D-galactosylglycosaminoglycan // UNIQUE-ID - DDP-NAcMur-Peptides TYPES - Compounds COMMON-NAME - a DDP-N-acetylmuramoyl-pentapeptide // UNIQUE-ID - DI-N-ACETYL-BETA-D-GLUCOSAMINYL TYPES - Compounds COMMON-NAME - N-acetyl-β-D-glucosaminyl-1,2-α-D-mannosyl-1,3-(N-acetyl-β-D-glucosaminyl-1,2-α-D-mannosyl-1,6)-β-D-mannosyl-1,4-N-acetyl-β-D-glucosaminyl-R COMMENT - R represents the remainder of the N-linked oligosaccharide in the glycoprotein acceptor. // UNIQUE-ID - DIACYLGLYCEROL-PYROPHOSPHATE TYPES - Compounds COMMON-NAME - a diacylglycerol pyrophosphate SYNONYMS - DGPP // UNIQUE-ID - DICARBOXYLIC-ACID-MONOAMIDES TYPES - Compounds COMMON-NAME - a monoamide of a dicarboxylate SYNONYMS - monoamide of a dicarboxylic acid // UNIQUE-ID - Dihydrofurano-Derivatives TYPES - Compounds COMMON-NAME - a dihydrofurano derivative // UNIQUE-ID - Dioxindole-3-Acetyl-3-O-hexoses TYPES - Compounds COMMON-NAME - a dioxindole-3-acetyl-3-O-hexose COMMENT - This compound is present in the flavedo (epicarp) of oranges (|FRAME: TAX-2711|) fed with radiolabeled /|FRAME:INDOLE_ACETATE_AUXIN|, |FRAME: DIOXINDOLE-3-ACETATE| /or |FRAME: 2-OXINDOLE-3-ACETIC-ACID| |CITS: [11382233]|. There is strong evidence that the hexose /present in orange is glucose (see: |FRAME: CPD-9642|) but, galactose, mannose, and lactose cannot be conclusively excluded /|CITS: [11382233]|. / SYNONYMS - 3-(-O-hexosyl)-dioxindole-3-acetate SYNONYMS - DiOxIAA-hexose SYNONYMS - 2-oxindole-3-acetyl-3-O-hexose // UNIQUE-ID - DIPHOSPHO-1D-MYO-INOSITOL-TETRAKISPHOSPH TYPES - Compounds COMMON-NAME - a diphospho-1D-myo-inositol tetrakisphosphate COMMENT - Please note that the exact location of the β-phosphate has not been determined yet. This structure is provided for illustration purpose. // UNIQUE-ID - DL-Phospholactate TYPES - Compounds COMMON-NAME - phospholactate SYNONYMS - DL-phospholactate // UNIQUE-ID - DL-Phosphomalate TYPES - Compounds COMMON-NAME - (RS)-phosphomalate SYNONYMS - DL-P-malate SYNONYMS - DL-phosphomalate // UNIQUE-ID - DNA-Cleaved-Recognition-Site TYPES - Compounds COMMON-NAME - DNA Cleaved at Recognition Site // UNIQUE-ID - DNA-With-Recognition-Site TYPES - Compounds COMMON-NAME - DNA containing a recognition site // UNIQUE-ID - EPITHIONITRILES TYPES - Compounds COMMON-NAME - an epithionitrile // UNIQUE-ID - epoxides TYPES - Compounds COMMON-NAME - an epoxide // UNIQUE-ID - Esters TYPES - Compounds COMMON-NAME - an ester // UNIQUE-ID - Galactosyl-fucosyl-galactosyl-R TYPES - Compounds COMMON-NAME - a galactosyl-(1->3)-[α-L-fucosyl(1->2)]-D-galactosyl-R // UNIQUE-ID - Gamma-Glutamylated-Glutamyl-acceptors TYPES - Compounds COMMON-NAME - a γ-glutamylated glutamyl acceptor // UNIQUE-ID - GLUCOSAMINYL-14-ETCETERA-MANNOSYL-R TYPES - Compounds COMMON-NAME - N-acetyl-β-D-glucosaminyl-1,4-(N-acetyl-D-glucosaminyl-1,2)-α-D-mannosyl-1,3-(β-N-acetyl-D-glucosaminyl-1,2-α-D-mannosyl-1,6)-β-D-mannosyl-R COMMENT - R represents the remainder of the N-linked oligosaccharide in the glycoprotein acceptor. // UNIQUE-ID - GLUCOSAMINYL-ETCETERA-MANNOSYL-R TYPES - Compounds COMMON-NAME - (N-acetyl-β-D-glucosaminyl-1,2)-α-D-mannosyl-1,3-(β-N-acetyl-D-glucosaminyl-1,2-α-D-mannosyl-1,6)-β-D-mannosyl-R COMMENT - R represents the remainder of the N-linked oligosaccharide in the glycoprotein acceptor. // UNIQUE-ID - GLUCURONOXYLAN-4-O-METHYL-D-GLUCURONATE TYPES - Compounds COMMON-NAME - a glucuronoxylan 4-o-methyl-D-glucuronate // UNIQUE-ID - GLUCURONOXYLAN-D-GLUCURONATE TYPES - Compounds COMMON-NAME - a glucuronoxylan D-glucuronate // UNIQUE-ID - Glycerates TYPES - Compounds COMMON-NAME - a glycerate // UNIQUE-ID - Glycerophosphodiesters TYPES - Compounds COMMON-NAME - a glycerophosphodiester SYNONYMS - glycerophosphodiester SYNONYMS - glycerol-3-P-OR // UNIQUE-ID - Glycolipids TYPES - Compounds COMMON-NAME - a glycolipid COMMENT - This class includes molecules that are composed of a lipid joined by a glycosidic linkage to a carbohydrate moiety. // UNIQUE-ID - Glycosaminoglycans TYPES - Compounds COMMON-NAME - glycosaminoglycan COMMENT - Glycosaminoglycans (also known as mucopolysaccharides) are long unbranched polysaccharides /consisting of a repeating disaccharide unit. This unit consists of an N-acetyl-hexosamine /and a hexose or hexuronic acid, either or both of which are often sulfated. /Members of the glycosaminoglycan family vary in the type of hexosamine, hexose or hexuronic acid /unit they contain (e.g. glucuronic acid, iduronic acid, galactose, galactosamine, glucosamine). / /Glycosaminoglycans are an important component of connective tissues. /Proteoglycans are proteins that are covalently linked to glycosaminoglycan chains. SYNONYMS - mucopolysaccharides // UNIQUE-ID - Groups TYPES - Compounds COMMON-NAME - Superatoms COMMENT - This class consists of molecular fragments that can be used by the Pathway Tools superatom /subsystem. Instances of this class should not be used as substrates of reactions. / / SYNONYMS - Groups // UNIQUE-ID - Guanido-Compounds TYPES - Compounds COMMON-NAME - a guanido compound // UNIQUE-ID - Halides TYPES - Compounds COMMON-NAME - a halide // UNIQUE-ID - Haloacetates TYPES - Compounds COMMON-NAME - a haloacetate // UNIQUE-ID - HEPARIN-GLUCOSAMINE TYPES - Compounds COMMON-NAME - a heparin glucosamine SYNONYMS - [heparan sulfate]-glucosamine // UNIQUE-ID - HEPARIN-GLUCOSAMINE-3-O-SULFATE TYPES - Compounds COMMON-NAME - a heparin-glucosamine 3-O-sulfate SYNONYMS - [heparan sulfate]-glucosamine 3-sulfate // UNIQUE-ID - Hormones TYPES - Compounds COMMON-NAME - a hormone // UNIQUE-ID - Hydrocarbons TYPES - Compounds COMMON-NAME - a hydrocarbon COMMENT - Hydrocarbons are compounds composed of only carbon and hydrogen atoms. // UNIQUE-ID - Hydroxamates TYPES - Compounds COMMON-NAME - a hydroxamate COMMENT - A hydroxamate is a class of compounds that contain a functional group in which an hydroxylamine is inserted into a carboxylic acid, with the general structure R-CO-NH-OH. // UNIQUE-ID - HYDROXYMETHYLCEPH-3-EM-4-CARBOXYLATE TYPES - Compounds COMMON-NAME - a 3-hydroxymethyl ceph-3-em-4-carboxylate // UNIQUE-ID - INDOLE-3-ACETYL-POLYPEPTIDE TYPES - Compounds COMMON-NAME - an indole-3-acetyl-polypeptide // UNIQUE-ID - Indolocarbazoles TYPES - Compounds COMMON-NAME - an indolocarbazole alkaloid // UNIQUE-ID - Inorganic-Minerals TYPES - Compounds COMMON-NAME - an inorganic mineral // UNIQUE-ID - Ions TYPES - Compounds COMMON-NAME - an ion // UNIQUE-ID - ISOTHIOCYANATES TYPES - Compounds COMMON-NAME - an isothiocyanate // UNIQUE-ID - KERATAN TYPES - Compounds COMMON-NAME - a keratan SYNONYMS - keratan sulfate SYNONYMS - Kerato sulfate SYNONYMS - keratan 6'-sulfate SYNONYMS - kerato 6'-sulfate // UNIQUE-ID - KERATAN-6-SULFATE TYPES - Compounds COMMON-NAME - a keratan 6'-sulfate SYNONYMS - keratan sulfate SYNONYMS - kerato sulfate SYNONYMS - keratan SYNONYMS - kerato 6'-sulfate // UNIQUE-ID - Keto-Acid TYPES - Compounds COMMON-NAME - a keto acid // UNIQUE-ID - L-2-AMINO-ACID TYPES - Compounds COMMON-NAME - an L-2-amino-acid SYNONYMS - an L-Amino acid // UNIQUE-ID - Lipids TYPES - Compounds COMMON-NAME - a lipid COMMENT - Lipid is a broad definition, meaning a biologically important molecule that is soluble in nonpolar solvents /but not in water. / // UNIQUE-ID - Luciferins TYPES - Compounds COMMON-NAME - a luciferin // UNIQUE-ID - Macrocycles TYPES - Compounds COMMON-NAME - a macrocycle COMMENT - A macrocycle is a cyclic macromolecule or a macromolecular cyclic portion of a molecule. // UNIQUE-ID - MALTOOLIGOSYLTREHALOSE TYPES - Compounds COMMON-NAME - a maltooligosyl-trehalose SYNONYMS - 1-α-D-{(1,4)-α-D-glucosyl}(n-1)-α-D-glucopyranoside // UNIQUE-ID - MANNOSYL-ETCETERA-MANNOSYL-R TYPES - Compounds COMMON-NAME - α-D-mannosyl-1,6-(N-acetyl-β-D-glucosaminyl-1,2-α-D-mannosyl-1,3)-β-D-mannosyl-R COMMENT - R represents the remainder of the N-linked oligosaccharide in the glycoprotein acceptor. // UNIQUE-ID - Mycothiol-mycoredoxin-mixed-disulfides TYPES - Compounds COMMON-NAME - a mycothiol-mycoredoxin mixed disulfide // UNIQUE-ID - N-ACETYL-D-GALACTOSAMINYL-POLYPEPTIDE TYPES - Compounds COMMON-NAME - N-acetyl-D-galactosaminyl-polypeptide // UNIQUE-ID - N-ACETYL-ETCETERA-LIPOPOLYSACCHARIDE TYPES - Compounds COMMON-NAME - a N-acetyl-D-glucosaminyl-lipopolysaccharide // UNIQUE-ID - N-ACETYLNEURAMINATE-GLYCOSIDES TYPES - Compounds COMMON-NAME - an N-acetylneuraminate glycoside // UNIQUE-ID - Nitriles TYPES - Compounds COMMON-NAME - a nitrile SYNONYMS - nitrile SYNONYMS - R-CN SYNONYMS - a nitrile // UNIQUE-ID - Nitroalkanes TYPES - Compounds COMMON-NAME - a nitroalkane // UNIQUE-ID - Non-Metabolic-Compounds TYPES - Compounds COMMON-NAME - a non-metabolic compound // UNIQUE-ID - Nonionic-Detergents TYPES - Compounds COMMON-NAME - a nonionic detergent COMMENT - Nonionic or Neutral detergents don't have any ionic groups. They are used in dishwashing liquids. // UNIQUE-ID - O-acylpseudotropines TYPES - Compounds COMMON-NAME - an O-acylpseudotropine // UNIQUE-ID - O-acyltropines TYPES - Compounds COMMON-NAME - an O-acyltropine // UNIQUE-ID - OLIGOPEPTIDES TYPES - Compounds COMMON-NAME - an oligopeptide // UNIQUE-ID - OLIGOPHOSPHATE TYPES - Compounds COMMON-NAME - an oligophosphate // UNIQUE-ID - Organometallics TYPES - Compounds COMMON-NAME - an organometallic compound // UNIQUE-ID - Organonitrogen-Heterocyclic-Compounds TYPES - Compounds COMMON-NAME - an organonitrogen heterocyclic compound // UNIQUE-ID - Organophosphorus-Compounds TYPES - Compounds COMMON-NAME - an organophosphorus compound // UNIQUE-ID - ORGANOSULFUR TYPES - Compounds COMMON-NAME - an organosulfur compound // UNIQUE-ID - Orthophosphoric-Monoesters TYPES - Compounds COMMON-NAME - a phosphate monoester COMMENT - This compound class stands for generic and unspecified phosphate monoester compounds. SYNONYMS - an orthophosphoric monoester // UNIQUE-ID - Oxygen-Substituted-Quinates TYPES - Compounds COMMON-NAME - a oxygen substituted quinate // UNIQUE-ID - Phenyl-Acetates TYPES - Compounds COMMON-NAME - a phenyl acetate // UNIQUE-ID - Phosphomannans TYPES - Compounds COMMON-NAME - a phosphomannan SYNONYMS - phosphomannan backbone // UNIQUE-ID - POLY-CIS-POLYPRENYL-DIPHOSPHATE TYPES - Compounds COMMON-NAME - a poly-cis-polyprenyldiphosphate SYNONYMS - a poly-cis-polyprenyl diphophate(n) // UNIQUE-ID - POLYPEPTIDE TYPES - Compounds COMMON-NAME - a polypeptide COMMENT - This compound class stands for generic and unspecified polypeptides, that can be modified by enzymes. /Chemically, there is not any real difference compared to proteins. // UNIQUE-ID - Prostaglandins TYPES - Compounds COMMON-NAME - a prostaglandin // UNIQUE-ID - Pseudo-Compounds TYPES - Compounds COMMON-NAME - a pseudo compound COMMENT - This compound class is a collection place for substrates that are ill-defined or may lack a structure for other reasons. // UNIQUE-ID - Pyrimidodiazepines TYPES - Compounds COMMON-NAME - a pyrimidodiazepine // UNIQUE-ID - Pyrrolidine-Diones TYPES - Compounds COMMON-NAME - a pyrrolidine dione // UNIQUE-ID - R-OR-S-2-HYDROXYPROPYL-COM TYPES - Compounds COMMON-NAME - a 2-hydroxypropyl-CoM // UNIQUE-ID - Radicals TYPES - Compounds COMMON-NAME - a radical COMMENT - Radicals are compounds that have an unpaired electron. They are usually highly reactive due to this. // UNIQUE-ID - Redox-Electron-Carriers TYPES - Compounds COMMON-NAME - a redox electron carrier // UNIQUE-ID - S-2-Haloacids TYPES - Compounds COMMON-NAME - an (S)-2-haloacid COMMENT - The R2 in this reaction represents a halogen. // UNIQUE-ID - S-3-HYDROXYACYL-N-ACYLTHIOETHANOLAMINE TYPES - Compounds COMMON-NAME - a S-3-hydroxyacyl-N-acylthioethanolamine // UNIQUE-ID - S-3-HYDROXYACYLHYDROLIPOATE TYPES - Compounds COMMON-NAME - a S-3-hydroxyacylhydrolipoate // UNIQUE-ID - S-Alkyl-L-Cysteine-S-Oxides TYPES - Compounds COMMON-NAME - an S-alkyl-L-cysteine S-oxide // UNIQUE-ID - S-Substituted-Glutathione TYPES - Compounds COMMON-NAME - a glutathione-toxin conjugate SYNONYMS - S-substituted glutathione SYNONYMS - R-S-G // UNIQUE-ID - Secondary-Alcohols TYPES - Compounds COMMON-NAME - a secondary alcohol // UNIQUE-ID - Secondary-Metabolites TYPES - Compounds COMMON-NAME - a secondary metabolite COMMENT - Secondary metabolites such as polyketides and alkaloids, which can act as antibiotics, can be collected here. Also certain types of storage polymers. // UNIQUE-ID - SQNYPIVQ-Cleavage-Sites TYPES - Compounds COMMON-NAME - an authentic SQNY-PIVQ cleavage site // UNIQUE-ID - Steroids TYPES - Compounds COMMON-NAME - a steroid COMMENT - Steroids are compounds possessing the skeleton of cyclopenta[a]phenanthrene or a skeleton derived /therefrom by one or more bond scissions or ring expansions or contractions. Methyl groups are normally present /at C-10 and C-13. An alkyl side chain may also be present at C-17. // UNIQUE-ID - Sulfo-Aldehydes TYPES - Compounds COMMON-NAME - a sulfo-aldehyde intermediate // UNIQUE-ID - Tautomers TYPES - Compounds COMMON-NAME - a tautomer COMMENT - Under this class, compounds are collected that can have tautomeric forms, for which the difference may be biochemically significant. // UNIQUE-ID - Tetraric-Acids TYPES - Compounds COMMON-NAME - a tetrarate SYNONYMS - a tetraric acid // UNIQUE-ID - THIOHYDROXIMATE-O-SULFATES TYPES - Compounds COMMON-NAME - a thiohydroximate-O-sulfate // UNIQUE-ID - TRI-N-ACETYL-BETA-D-GLUCOSAMINYL TYPES - Compounds COMMON-NAME - N-acetyl-β-D-glucosaminyl-1,2-α-D-mannosyl-1,3-(N-acetyl-β-D-glucosaminyl-1,2-α-D-mannosyl-1,6)-(N-acetyl-β-D-glucosaminyl-1,4)-β-D-mannosyl-1,4-N-acetyl-β-D-glucosaminyl-R COMMENT - R represents the remainder of the N-linked oligosaccharide in the glycoprotein acceptor. // UNIQUE-ID - Ubiquinol-Analogues TYPES - Compounds COMMON-NAME - a ubiquinol analogue // UNIQUE-ID - Ureido-Compounds TYPES - Compounds COMMON-NAME - a ureido compound // UNIQUE-ID - Vitamins TYPES - Compounds COMMON-NAME - a vitamin // UNIQUE-ID - Xylarates TYPES - Compounds COMMON-NAME - a xylarate // UNIQUE-ID - Acceptors TYPES - Compounds-Holder-Class COMMON-NAME - an acceptor // UNIQUE-ID - DNA-N TYPES - Polynucleotide-Enzyme-Substrates COMMON-NAME - DNAn SYNONYMS - DNA(N) // UNIQUE-ID - DNA-Segment-in-Reverse-Orientations TYPES - Polynucleotide-Enzyme-Substrates COMMON-NAME - a DNA segment in reverse orientation // UNIQUE-ID - DNA-Segment-Placeholder TYPES - Polynucleotide-Enzyme-Substrates COMMON-NAME - a DNA segment // UNIQUE-ID - DNA-with-Holiday-Junctions TYPES - Polynucleotide-Enzyme-Substrates COMMON-NAME - a DNA with unresolved recombinational or Holliday junctions, created by RecA // UNIQUE-ID - DNA-with-mismatch TYPES - Polynucleotide-Enzyme-Substrates COMMON-NAME - a DNA containing a mismatch // UNIQUE-ID - Methylated-DNA TYPES - Polynucleotide-Enzyme-Substrates COMMON-NAME - methylated DNA // UNIQUE-ID - General-mRNA-Substrates TYPES - General-RNA-Substrates COMMON-NAME - an mRNA COMMENT - This class stands for general mRNA molecules, to be used in general reactions such as mRNA splicing. / It is not the same as the super class mRNAs, which includes all mRNAs in the database. // UNIQUE-ID - General-rRNA-Substrates TYPES - General-RNA-Substrates COMMON-NAME - an rRNA COMMENT - This class stands for general rRNA molecules, to be used in general reactions such as rRNA processing. / It is not the same as the super class rRNAs, which includes all rRNAs in the database. // UNIQUE-ID - Some-tRNA TYPES - General-RNA-Substrates TYPES - tRNAs COMMON-NAME - a tRNA COMMENT - This class stands for general tRNA molecules, to be used in general reactions as a substrate for enzymes that produce, consume, or modify tRNA. / It is not the same as the super class TRNA, which includes all tRNAs in the database. SYNONYMS - tRNA // UNIQUE-ID - Protein-Complexes TYPES - Complexes TYPES - Proteins COMMON-NAME - a protein complex COMMENT - An instance of this class defines a multimeric protein complex consisting /of multiple aggregated polypeptide chains. It may be chemically /modified. It may be a homomultimer or a heteromultimer. Its components /may themselves be protein complexes. // UNIQUE-ID - Protein-DNA-Complexes TYPES - Complexes TYPES - Proteins COMMON-NAME - a protein-DNA complex COMMENT - An instance of this class defines a complex consisting of a DNA region /bound to a protein, such as a transcription factor associated with its /binding site. // UNIQUE-ID - Protein-RNA-Complexes TYPES - Complexes TYPES - Proteins COMMON-NAME - a protein-RNA complex COMMENT - An instance of this class defines a macromolecular complex whose components are /proteins and RNAs, such as the ribosome. / // UNIQUE-ID - Protein-Small-Molecule-Complexes TYPES - Complexes TYPES - Proteins COMMON-NAME - a protein-small molecule complex COMMENT - Instances of this class describe noncovalent complexes formed between a /protein and a small molecule. / // UNIQUE-ID - 3-Phosphopolynucleotides TYPES - Polynucleotides COMMON-NAME - a 3'-phosphopolynucleotide // UNIQUE-ID - 5-Phosphopolynucleotides TYPES - Polynucleotides COMMON-NAME - a 5'-phosphopolynucleotide // UNIQUE-ID - DNA TYPES - Polynucleotides COMMON-NAME - a deoxyribonucleic acid // UNIQUE-ID - RNA TYPES - Polynucleotides COMMON-NAME - RNA COMMENT - An RNA molecule. // UNIQUE-ID - RNA-DNA-hybrids TYPES - Polynucleotides COMMON-NAME - a RNA-DNA hybrid // UNIQUE-ID - Caldesmon-Proteins TYPES - Proteins COMMON-NAME - a caldesmon // UNIQUE-ID - Hemoproteins TYPES - Proteins COMMON-NAME - a hemoprotein // UNIQUE-ID - Microsomal-membrane-proteins TYPES - Proteins COMMON-NAME - a microsomal-membrane protein SYNONYMS - [microsomal-membrane-protein] // UNIQUE-ID - Modified-Proteins TYPES - Proteins COMMON-NAME - a modified protein COMMENT - This class describes proteins that have been covalently modified, such as by the addition of /a phosphate group. / // UNIQUE-ID - MPT-Synthases TYPES - Proteins COMMON-NAME - a molybdopterin synthase // UNIQUE-ID - Non-ribosomal-peptide-synthetases TYPES - Proteins COMMON-NAME - a non-ribosomal peptide synthetase COMMENT - The biosynthetic system for the production of |FRAME: Nonribosomal-Peptides| operates nucleic /acid-free at the protein level. /The specific condensation of amino acids and related carboxyl containing compounds is directed by /protein templates, and each biosynthetic step generally requires a protein module. /A minimal configuration consists of an adenylation domain for amino acid activation, a thiolation domain /for transfer of activated intermediates, and a condensation domain. / /Domains and modules are assembled at the gene level into gene clusters, which are translated into /multifunctional proteins or multi-enzyme complexes, and post-translationally modified by addition of /|FRAME: PANTETHEINE-P| to the thiolation domain |CITS: [16774586]|. / /Since a minimal module requires 3–3.5 kbp of genetic sequence, and since most non-ribosomal peptide /synthetases (NRPSs) consist of several such modules, some NRPS genes are the largest known genes /|CITS: [15487945]|. // UNIQUE-ID - PC-1 TYPES - Proteins COMMON-NAME - a transporter // UNIQUE-ID - Peroxiredoxins TYPES - Proteins COMMON-NAME - a peroxiredoxin COMMENT - Peroxiredoxins are a ubiquitous family of antioxidant enzymes which have been identified in eubacteria, /archaea, yeast, algae, higher plants, and animals |CITS: [12714747]|. /All peroxiredoxins share the same basic catalytic mechanism, in which an activated cysteine /(the peroxidative cysteine) is oxidized to a sulfenic acid by the peroxide substrate. /They have a rather low activity, but possess a broad substrate specificity. /Substrates for peroxiredoxins include hydrogen peroxides, alkyl hydroperoxides, and peroxynitrites. / /Reductive regeneration of the oxidized catalytic thiol depends on glutathione, thioredoxin, glutaredoxin, /cyclophilin, and/or tryparedoxin |CITS: [16284092]|. / /In plants, peroxiredoxins are categorized into four subclasses based on subunit composition, number /and location of the conserved cysteine residues, and the sequence environment of the catalytic center. /The four types are: / /1. |FRAME: 2-Cys-Peroxiredoxins|: these peroxiredoxins contain two conserved cysteines and are /homodimeric enzymes where the two subunits interact in the catalytic cycle and are linked via a /disulfide bond in the oxidized form. Eukaryotic 2-Cys proxiredoxins, which are exclusively localized /in the chloroplast, are also shown to regulate H2O2-mediated signal transduction |CITS: [9263459]|. / /2. |FRAME: 1-Cys-Peroxiredoxins|: these contain a single conserved catalytic cysteine and are /preferentially expressed in plants in the embryo and aleurone |CITS: [8914536]|. / /3. |FRAME: Type-II-Peroxiredoxins| (also known as atypical 2-Cys peroxiredoxins): these can use /thioredoxin and glutaredoxin as the reductant and can exist in multiple isoforms localized in plants in /many subcellular compartments, including one form in plastids |CITS: [12913160]|. / /4. |FRAME: Q-Type-Peroxiredoxins| ((also known as atypical 2-Cys peroxiredoxins): these are /homologues of the E. coli bacterioferritin co-migrating protein and function as monomers /|CITS: [10998352]|. // UNIQUE-ID - Polypeptides TYPES - Proteins COMMON-NAME - a polypeptide COMMENT - An instance of this class describes a single protein gene product, that is, /a single polypeptide chain. The polypeptide chain may have undergone /post-translational modification, and it also might be part of a larger /protein or other macromolecular complex (as specified by its Component-Of slot). // UNIQUE-ID - Protein-Ox-Disulfides TYPES - Proteins COMMON-NAME - a protein with oxidized disulfide bonds COMMENT - This compound class stands for generic and unspecified proteins with oxidized disulfide bonds. SYNONYMS - a protein with oxidized disulfide bonds SYNONYMS - protein with oxidized disulfide bonds // UNIQUE-ID - Protein-Red-Disulfides TYPES - Proteins COMMON-NAME - a protein with reduced sulfide groups COMMENT - This compound class stands for generic and unspecified proteins with reduced SH groups. SYNONYMS - a protein with reduced SH groups SYNONYMS - protein with reduced SH groups // UNIQUE-ID - Pyruvate-Kinases TYPES - Proteins COMMON-NAME - a pyruvate kinase // UNIQUE-ID - Receptor-proteins TYPES - Proteins COMMON-NAME - a receptor protein // UNIQUE-ID - Sigma-Factors TYPES - Proteins COMMON-NAME - a sigma factor COMMENT - Sigma factors are monomers that complex with the apo RNA polymerase, enabling /it to recognize different classes of promoters. / // UNIQUE-ID - ubiquitin-protein-ligase-E3 TYPES - Proteins COMMON-NAME - ubiquitin-protein ligase E3 // UNIQUE-ID - EV-COMP-AINF-FN-FROM-SEQ TYPES - EV-COMP-AINF COMMON-NAME - Automated inference of function from sequence COMMENT - Automated inference of function from sequence. A computer inferred a gene function based on sequence, /profile, or structural similarity (as computed from sequence) to one or more other sequences. // UNIQUE-ID - EV-COMP-AINF-POSITIONAL-IDENTIFICATION TYPES - EV-COMP-AINF COMMON-NAME - Automated inference of promoter position COMMENT - Automated inference of promoter position relative to the -10 and -35 boxes. // UNIQUE-ID - EV-COMP-AINF-SIMILAR-TO-CONSENSUS TYPES - EV-COMP-AINF COMMON-NAME - Automated inference based on similarity to consensus sequences COMMENT - A DNA sequence similar to previously known consensus sequences is computationally identified. // UNIQUE-ID - EV-COMP-AINF-SINGLE-DIRECTON TYPES - EV-COMP-AINF COMMON-NAME - Automated inference that a single-gene directon is a transcription unit COMMENT - Automated inference of transcription unit based on single-gene directon. Existence of a single-gene transcription unit /for gene G is inferred computationally by the existence of upstream and downstream genes transcribed in the /opposite direction of G. // UNIQUE-ID - EV-COMP-HINF-FN-FROM-SEQ TYPES - EV-COMP-HINF COMMON-NAME - Human inference of function from sequence COMMENT - A person inferred, or reviewed a computer inference of, gene function based /on sequence, profile, or structural similarity (as computed from sequence) to /one or more other sequences. / // UNIQUE-ID - EV-COMP-HINF-POSITIONAL-IDENTIFICATION TYPES - EV-COMP-HINF COMMON-NAME - Human inference of promoter position COMMENT - A person inferred, or reviewed a computer inference of, promoter position relative to the -10 and -35 boxes. // UNIQUE-ID - EV-COMP-HINF-SIMILAR-TO-CONSENSUS TYPES - EV-COMP-HINF COMMON-NAME - Human inference based on similarity to consensus sequences COMMENT - A person inferred, or reviewed a computer inference of, sequence /function based on similarity to a consensus sequence. // UNIQUE-ID - EV-EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS TYPES - EV-EXP-IDA COMMON-NAME - Binding of cellular extracts COMMENT - There exists physical evidence of the binding of cellular extracts containing /a regulatory protein to its DNA binding site. This can be either by /footprinting or mobility shift assays. // UNIQUE-ID - EV-EXP-IDA-BINDING-OF-PURIFIED-PROTEINS TYPES - EV-EXP-IDA COMMON-NAME - Binding of purified proteins // UNIQUE-ID - EV-EXP-IDA-BOUNDARIES-DEFINED TYPES - EV-EXP-IDA COMMON-NAME - Boundaries of transcription experimentally identified COMMENT - Sites or genes bounding the transcription unit are experimentally identified. Several possible cases exist, such as defining the boundaries of a transcription unit with an experimentally identified promoter and terminator, or with a promoter and a downstream gene that is transcribed in the opposite direction, or with a terminator and an upstream gene that is transcribed in the opposite direction. // UNIQUE-ID - EV-EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP TYPES - EV-EXP-IDA COMMON-NAME - High-throughput transcription initiation mapping COMMENT - The transcription start site is identified using a high-throughput experimental modified RACE approach. // UNIQUE-ID - EV-EXP-IDA-PART-PURIFIED-PROTEIN TYPES - EV-EXP-IDA COMMON-NAME - Assay of partially-purified protein COMMENT - Direct assay of partially purified protein from a specific organism. /Protein partially purified, and activity measured using an in vitro /assay. Expression host is unspecified. // UNIQUE-ID - EV-EXP-IDA-PURIFIED-PROTEIN TYPES - EV-EXP-IDA COMMON-NAME - Assay of protein purified to homogeneity COMMENT - Direct assay of purified protein. Protein purified to homogeneity, and /activity measured using an in vitro assay. Expression host is unspecified. // UNIQUE-ID - EV-EXP-IDA-PURIFIED-PROTEIN-MULTSPECIES TYPES - EV-EXP-IDA COMMON-NAME - Assay of protein purified from mixed culture COMMENT - Protein purified from mixed culture or other multispecies environment (such as, infected plant or animal tissue), and activity measured through in vitro assay. // UNIQUE-ID - EV-EXP-IDA-RADIO TYPES - EV-EXP-IDA COMMON-NAME - Inferred from radio-tracer experiment COMMENT - The assertion, such as inference of a metabolic pathway, was inferred from a radio-tracer experiment. // UNIQUE-ID - EV-EXP-IDA-RNA-POLYMERASE-FOOTPRINTING TYPES - EV-EXP-IDA COMMON-NAME - RNA polymerase footprinting COMMENT - The binding of RNA polymerase to a DNA region (the promoter) is shown by footprinting. // UNIQUE-ID - EV-EXP-IDA-TRANSCRIPT-LEN-DETERMINATION TYPES - EV-EXP-IDA COMMON-NAME - Length of transcript experimentally determined COMMENT - The length of the (transcribed) RNA is experimentally determined. The length of the mRNA is compared with that of the DNA sequence and by this means the number of genes transcribed are established. // UNIQUE-ID - EV-EXP-IDA-TRANSCRIPTION-INIT-MAPPING TYPES - EV-EXP-IDA COMMON-NAME - Transcription initiation mapping COMMENT - The transcription start site is identified by primer extension. // UNIQUE-ID - EV-EXP-IDA-UNPURIFIED-PROTEIN TYPES - EV-EXP-IDA COMMON-NAME - Assay of unpurified protein COMMENT - Direct assay of unpurified protein. Presence of a protein activity is /indicated by an assay, but the protein has not been purified. /Expression host is unspecified. // UNIQUE-ID - EV-EXP-IEP-COREGULATION TYPES - EV-EXP-IEP COMMON-NAME - Inferred through co-regulation COMMENT - Inferred through co-regulation. A transcription unit is inferred because a set of /adjacent genes that are transcribed in the same direction exhibit similar /expression patterns under a range of environmental conditions. / // UNIQUE-ID - EV-EXP-IEP-GENE-EXPRESSION-ANALYSIS TYPES - EV-EXP-IEP COMMON-NAME - Gene expression analysis COMMENT - The expression of the gene is analyzed through a transcriptional fusion (i.e. lacZ), and a difference in expression levels is observed when the regulatory protein is present (wild type) vs in its absence. Note that this evidence does not eliminate the possiblity of an indirect effect of the regulator on the regulated gene. // UNIQUE-ID - EV-EXP-IGI-FUNC-COMPLEMENTATION TYPES - EV-EXP-IGI COMMON-NAME - Inferred by functional complementation COMMENT - Protein activity inferred by isolating its gene and performing functional complementation of a well characterized heterologous mutant for the protein. // UNIQUE-ID - EV-EXP-IMP-POLAR-MUTATION TYPES - EV-EXP-IMP COMMON-NAME - Polar mutation COMMENT - If a mutation in a gene or promoter prevents expression of the downstream genes due to a polar effect, the mutated gene is clearly part of the transcription unit. // UNIQUE-ID - EV-EXP-IMP-REACTION-BLOCKED TYPES - EV-EXP-IMP COMMON-NAME - Reaction blocked in mutant COMMENT - Mutant is characterized, and blocking of reaction is demonstrated. // UNIQUE-ID - EV-EXP-IMP-REACTION-ENHANCED TYPES - EV-EXP-IMP COMMON-NAME - Reaction enhanced in mutant COMMENT - Gene is isolated and over-expressed, and increased accumulation of reaction product is observed. // UNIQUE-ID - EV-EXP-IMP-SITE-MUTATION TYPES - EV-EXP-IMP COMMON-NAME - Site mutation COMMENT - A cis-mutation in the DNA sequence of the transcription-factor binding site interferes with the operation of the regulatory function. This is considered strong evidence for the existence and functional role of the DNA binding site. // UNIQUE-ID - GO:0045028 TYPES - GO:0001608 TYPES - GO:0001614 COMMON-NAME - purinergic nucleotide receptor activity, G-protein coupled SYNONYMS - G protein coupled purinergic nucleotide receptor activity SYNONYMS - G-protein coupled purinergic nucleotide receptor activity SYNONYMS - G-protein-coupled purinergic nucleotide receptor activity SYNONYMS - P2Y SYNONYMS - purinergic nucleotide receptor activity, G protein coupled // UNIQUE-ID - GO:0001616 TYPES - GO:0001615 COMMON-NAME - growth hormone secretagogue receptor activity // UNIQUE-ID - GO:0004997 TYPES - GO:0001615 COMMON-NAME - thyrotropin-releasing hormone receptor activity // UNIQUE-ID - GO:0004954 TYPES - GO:0004953 COMMON-NAME - prostanoid receptor activity // UNIQUE-ID - GO:0001631 TYPES - GO:0004974 COMMON-NAME - cysteinyl leukotriene receptor activity SYNONYMS - CysLT receptor // UNIQUE-ID - GO:0001632 TYPES - GO:0004974 COMMON-NAME - leukotriene B4 receptor activity SYNONYMS - BLT receptor // UNIQUE-ID - GO:0001594 TYPES - GO:0008227 COMMON-NAME - trace-amine receptor activity // UNIQUE-ID - GO:0004935 TYPES - GO:0008227 COMMON-NAME - adrenoceptor activity SYNONYMS - adrenergic receptor // UNIQUE-ID - GO:0004952 TYPES - GO:0008227 TYPES - GO:0030594 TYPES - GO:0035240 COMMON-NAME - dopamine receptor activity // UNIQUE-ID - GO:0004969 TYPES - GO:0008227 COMMON-NAME - histamine receptor activity // UNIQUE-ID - GO:0004981 TYPES - GO:0008227 TYPES - GO:0015464 COMMON-NAME - muscarinic acetylcholine receptor activity // UNIQUE-ID - GO:0004993 TYPES - GO:0008227 COMMON-NAME - serotonin receptor activity SYNONYMS - 5-HT receptor SYNONYMS - 5-hydroxytryptamine receptor // UNIQUE-ID - GO:0001595 TYPES - GO:0008528 COMMON-NAME - angiotensin receptor activity // UNIQUE-ID - GO:0001603 TYPES - GO:0008528 COMMON-NAME - vasopressin-like receptor activity // UNIQUE-ID - GO:0001604 TYPES - GO:0008528 COMMON-NAME - urotensin II receptor activity // UNIQUE-ID - GO:0001637 TYPES - GO:0008528 COMMON-NAME - G-protein chemoattractant receptor activity SYNONYMS - G protein chemoattractant receptor activity // UNIQUE-ID - GO:0004942 TYPES - GO:0008528 COMMON-NAME - anaphylatoxin receptor activity // UNIQUE-ID - GO:0004947 TYPES - GO:0008528 COMMON-NAME - bradykinin receptor activity // UNIQUE-ID - GO:0004962 TYPES - GO:0008528 COMMON-NAME - endothelin receptor activity // UNIQUE-ID - GO:0004977 TYPES - GO:0008528 COMMON-NAME - melanocortin receptor activity // UNIQUE-ID - GO:0004982 TYPES - GO:0008528 COMMON-NAME - N-formyl peptide receptor activity SYNONYMS - Fmet-leu-phe receptor // UNIQUE-ID - GO:0004985 TYPES - GO:0008528 COMMON-NAME - opioid receptor activity // UNIQUE-ID - GO:0008188 TYPES - GO:0008528 TYPES - GO:0030594 TYPES - GO:0042923 COMMON-NAME - neuropeptide receptor activity // UNIQUE-ID - GO:0015057 TYPES - GO:0008528 COMMON-NAME - thrombin receptor activity // UNIQUE-ID - GO:0016499 TYPES - GO:0008528 COMMON-NAME - orexin receptor activity // UNIQUE-ID - GO:0004963 TYPES - GO:0016500 COMMON-NAME - follicle-stimulating hormone receptor activity SYNONYMS - follicle stimulating hormone receptor activity // UNIQUE-ID - GO:0004964 TYPES - GO:0016500 COMMON-NAME - lutropin-choriogonadotropic hormone receptor activity // UNIQUE-ID - GO:0004968 TYPES - GO:0016500 COMMON-NAME - gonadotropin-releasing hormone receptor activity // UNIQUE-ID - GO:0004996 TYPES - GO:0016500 COMMON-NAME - thyroid-stimulating hormone receptor activity SYNONYMS - thyrotropin receptor // UNIQUE-ID - GO:0030273 TYPES - GO:0016500 COMMON-NAME - melanin-concentrating hormone receptor activity SYNONYMS - MCH receptor // UNIQUE-ID - GO:0003777 TYPES - GO:0003774 COMMON-NAME - microtubule motor activity COMMENT - Consider also annotating to the molecular function term 'microtubule binding ; GO:0008017'. SYNONYMS - axonemal motor activity SYNONYMS - dynein SYNONYMS - dynein ATPase activity SYNONYMS - kinesin SYNONYMS - kinesin motor activity SYNONYMS - kinetochore motor activity // UNIQUE-ID - GO:0008639 TYPES - GO:0003824 COMMON-NAME - small protein conjugating enzyme activity SYNONYMS - E2 SYNONYMS - ubiquitin-like conjugating enzyme activity // UNIQUE-ID - GO:0008641 TYPES - GO:0003824 COMMON-NAME - small protein activating enzyme activity SYNONYMS - ubiquitin-like activating enzyme activity // UNIQUE-ID - GO:0008907 TYPES - GO:0003824 COMMON-NAME - integrase activity // UNIQUE-ID - GO:0009975 TYPES - GO:0003824 COMMON-NAME - cyclase activity // UNIQUE-ID - GO:0016491 TYPES - GO:0003824 COMMON-NAME - oxidoreductase activity COMMENT - Note that enzymes of class EC:1.97.-.- should also be annotated to this term. SYNONYMS - redox activity SYNONYMS - oxidoreductase activity, acting on other substrates // UNIQUE-ID - GO:0016740 TYPES - GO:0003824 COMMON-NAME - transferase activity // UNIQUE-ID - GO:0016787 TYPES - GO:0003824 COMMON-NAME - hydrolase activity // UNIQUE-ID - GO:0016829 TYPES - GO:0003824 COMMON-NAME - lyase activity COMMENT - Note that enzymes of class EC:4.99.-.- should also be annotated to this term. SYNONYMS - other lyase activity // UNIQUE-ID - GO:0016853 TYPES - GO:0003824 COMMON-NAME - isomerase activity COMMENT - Note that enzymes of class EC:5.99.-.- should also be annotated to this term. SYNONYMS - other isomerase activity // UNIQUE-ID - GO:0016874 TYPES - GO:0003824 COMMON-NAME - ligase activity // UNIQUE-ID - GO:0017140 TYPES - GO:0003824 COMMON-NAME - lipoic acid synthase activity // UNIQUE-ID - GO:0019239 TYPES - GO:0003824 COMMON-NAME - deaminase activity // UNIQUE-ID - GO:0032451 TYPES - GO:0003824 COMMON-NAME - demethylase activity // UNIQUE-ID - GO:0070283 TYPES - GO:0003824 COMMON-NAME - radical SAM enzyme activity // UNIQUE-ID - GO:0004601 TYPES - GO:0016209 TYPES - GO:0016684 COMMON-NAME - peroxidase activity SYNONYMS - peroxidase reaction SYNONYMS - bacterial catalase-peroxidase activity SYNONYMS - eosinophil peroxidase activity SYNONYMS - lactoperoxidase activity SYNONYMS - myeloperoxidase activity // UNIQUE-ID - GO:0030337 TYPES - GO:0003887 TYPES - GO:0030234 COMMON-NAME - DNA polymerase processivity factor activity SYNONYMS - processivity clamp SYNONYMS - sliding clamp // UNIQUE-ID - GO:0003735 TYPES - GO:0005198 COMMON-NAME - structural constituent of ribosome COMMENT - Note that this term may be used to annotate ribosomal RNAs as well as ribosomal proteins. SYNONYMS - ribosomal protein SYNONYMS - ribosomal RNA // UNIQUE-ID - GO:0005199 TYPES - GO:0005198 COMMON-NAME - structural constituent of cell wall // UNIQUE-ID - GO:0005200 TYPES - GO:0005198 COMMON-NAME - structural constituent of cytoskeleton // UNIQUE-ID - GO:0005201 TYPES - GO:0005198 COMMON-NAME - extracellular matrix structural constituent SYNONYMS - extracellular matrix glycoprotein // UNIQUE-ID - GO:0005212 TYPES - GO:0005198 COMMON-NAME - structural constituent of eye lens // UNIQUE-ID - GO:0008307 TYPES - GO:0005198 COMMON-NAME - structural constituent of muscle // UNIQUE-ID - GO:0017056 TYPES - GO:0005198 COMMON-NAME - structural constituent of nuclear pore // UNIQUE-ID - GO:0019911 TYPES - GO:0005198 COMMON-NAME - structural constituent of myelin sheath // UNIQUE-ID - GO:0030280 TYPES - GO:0005198 COMMON-NAME - structural constituent of epidermis // UNIQUE-ID - GO:0005326 TYPES - GO:0005215 COMMON-NAME - neurotransmitter transporter activity // UNIQUE-ID - GO:0005386 TYPES - GO:0005215 COMMON-NAME - carrier activity SYNONYMS - carrier type transporter // UNIQUE-ID - GO:0005487 TYPES - GO:0005215 COMMON-NAME - nucleocytoplasmic transporter activity // UNIQUE-ID - GO:0015238 TYPES - GO:0005215 COMMON-NAME - drug transporter activity // UNIQUE-ID - GO:0022857 TYPES - GO:0005215 COMMON-NAME - transmembrane transporter activity // UNIQUE-ID - GO:0022892 TYPES - GO:0005215 COMMON-NAME - substrate-specific transporter activity // UNIQUE-ID - GO:0042910 TYPES - GO:0005215 COMMON-NAME - xenobiotic transporter activity // UNIQUE-ID - GO:0051183 TYPES - GO:0005215 COMMON-NAME - vitamin transporter activity SYNONYMS - vitamin or cofactor transporter activity // UNIQUE-ID - GO:0051184 TYPES - GO:0005215 COMMON-NAME - cofactor transporter activity SYNONYMS - vitamin or cofactor transporter activity // UNIQUE-ID - GO:0000166 TYPES - GO:0005488 COMMON-NAME - nucleotide binding // UNIQUE-ID - GO:0001871 TYPES - GO:0005488 COMMON-NAME - pattern binding COMMENT - Note that this term and its child terms are intended for annotation of gene products which function to recognize (bind) the repeating structural units such as polysaccharides or peptidoglycans commonly found in microbial cell walls and virions. If such binding is coupled to signal transduction, use 'pattern recognition receptor activity ; GO:0008329' instead. SYNONYMS - pattern recognition activity // UNIQUE-ID - GO:0001882 TYPES - GO:0005488 COMMON-NAME - nucleoside binding // UNIQUE-ID - GO:0003676 TYPES - GO:0005488 COMMON-NAME - nucleic acid binding // UNIQUE-ID - GO:0003682 TYPES - GO:0005488 COMMON-NAME - chromatin binding SYNONYMS - lamin/chromatin binding SYNONYMS - microtubule/chromatin interaction SYNONYMS - nuclear membrane vesicle binding to chromatin // UNIQUE-ID - GO:0003823 TYPES - GO:0005488 COMMON-NAME - antigen binding SYNONYMS - antibody SYNONYMS - B cell receptor activity SYNONYMS - immunoglobulin SYNONYMS - opsonin activity // UNIQUE-ID - GO:0005515 TYPES - GO:0005488 COMMON-NAME - protein binding SYNONYMS - N-methyl-D-aspartate receptor-associated protein activity SYNONYMS - alpha-2 macroglobulin receptor-associated protein activity SYNONYMS - calcium-dependent cell adhesion molecule activity SYNONYMS - calcium-independent cell adhesion molecule activity SYNONYMS - cell adhesion molecule activity SYNONYMS - cell adhesion receptor activity SYNONYMS - death receptor adaptor protein activity SYNONYMS - death receptor interacting protein activity SYNONYMS - death receptor-associated factor activity SYNONYMS - glycine receptor-associated protein SYNONYMS - nicotinic acetylcholine receptor-associated protein activity SYNONYMS - protein degradation tagging activity SYNONYMS - protein tagging activity SYNONYMS - receptor-associated protein activity SYNONYMS - transmembrane receptor protein serine/threonine kinase receptor-associated protein activity SYNONYMS - protein amino acid binding // UNIQUE-ID - GO:0005549 TYPES - GO:0005488 COMMON-NAME - odorant binding // UNIQUE-ID - GO:0008144 TYPES - GO:0005488 COMMON-NAME - drug binding // UNIQUE-ID - GO:0008289 TYPES - GO:0005488 COMMON-NAME - lipid binding // UNIQUE-ID - GO:0008367 TYPES - GO:0005488 COMMON-NAME - bacterial binding SYNONYMS - bacterium binding SYNONYMS - binding to bacterium // UNIQUE-ID - GO:0008430 TYPES - GO:0005488 COMMON-NAME - selenium binding // UNIQUE-ID - GO:0019825 TYPES - GO:0005488 COMMON-NAME - oxygen binding SYNONYMS - cytochrome P450 SYNONYMS - cytochrome P450 activity // UNIQUE-ID - GO:0019840 TYPES - GO:0005488 COMMON-NAME - isoprenoid binding // UNIQUE-ID - GO:0019842 TYPES - GO:0005488 COMMON-NAME - vitamin binding // UNIQUE-ID - GO:0030246 TYPES - GO:0005488 COMMON-NAME - carbohydrate binding SYNONYMS - selectin // UNIQUE-ID - GO:0031406 TYPES - GO:0005488 COMMON-NAME - carboxylic acid binding // UNIQUE-ID - GO:0042165 TYPES - GO:0005488 COMMON-NAME - neurotransmitter binding // UNIQUE-ID - GO:0042277 TYPES - GO:0005488 COMMON-NAME - peptide binding // UNIQUE-ID - GO:0042562 TYPES - GO:0005488 COMMON-NAME - hormone binding // UNIQUE-ID - GO:0043021 TYPES - GO:0005488 COMMON-NAME - ribonucleoprotein binding SYNONYMS - RNP binding // UNIQUE-ID - GO:0043167 TYPES - GO:0005488 COMMON-NAME - ion binding SYNONYMS - atom binding // UNIQUE-ID - GO:0043176 TYPES - GO:0005488 COMMON-NAME - amine binding // UNIQUE-ID - GO:0046906 TYPES - GO:0005488 COMMON-NAME - tetrapyrrole binding SYNONYMS - porphyrin binding // UNIQUE-ID - GO:0048037 TYPES - GO:0005488 COMMON-NAME - cofactor binding // UNIQUE-ID - GO:0050840 TYPES - GO:0005488 COMMON-NAME - extracellular matrix binding SYNONYMS - adhesive extracellular matrix constituent SYNONYMS - extracellular matrix constituent binding // UNIQUE-ID - GO:0051540 TYPES - GO:0005488 COMMON-NAME - metal cluster binding // UNIQUE-ID - GO:0060090 TYPES - GO:0005488 COMMON-NAME - molecular adaptor activity // UNIQUE-ID - GO:0008135 TYPES - GO:0003676 TYPES - GO:0045182 COMMON-NAME - translation factor activity, nucleic acid binding // UNIQUE-ID - GO:0003700 TYPES - GO:0003677 TYPES - GO:0030528 COMMON-NAME - transcription factor activity // UNIQUE-ID - GO:0003712 TYPES - GO:0008134 TYPES - GO:0030528 COMMON-NAME - transcription cofactor activity SYNONYMS - transcriptional co-regulator SYNONYMS - transcriptional cofactor activity // UNIQUE-ID - GO:0016531 TYPES - GO:0005507 TYPES - GO:0016530 COMMON-NAME - copper chaperone activity // UNIQUE-ID - GO:0009053 TYPES - GO:0009055 COMMON-NAME - electron donor activity // UNIQUE-ID - GO:0009054 TYPES - GO:0009055 COMMON-NAME - electron acceptor activity // UNIQUE-ID - GO:0016247 TYPES - GO:0015457 COMMON-NAME - channel regulator activity // UNIQUE-ID - GO:0004857 TYPES - GO:0030234 COMMON-NAME - enzyme inhibitor activity // UNIQUE-ID - GO:0008047 TYPES - GO:0030234 COMMON-NAME - enzyme activator activity // UNIQUE-ID - GO:0016536 TYPES - GO:0030234 COMMON-NAME - cyclin-dependent protein kinase 5 activator regulator activity SYNONYMS - cyclin-dependent protein kinase 5 activator, intrinsic regulator activity // UNIQUE-ID - GO:0019207 TYPES - GO:0030234 COMMON-NAME - kinase regulator activity // UNIQUE-ID - GO:0019208 TYPES - GO:0030234 COMMON-NAME - phosphatase regulator activity // UNIQUE-ID - GO:0030249 TYPES - GO:0030234 COMMON-NAME - guanylate cyclase regulator activity // UNIQUE-ID - GO:0030695 TYPES - GO:0030234 COMMON-NAME - GTPase regulator activity // UNIQUE-ID - GO:0042979 TYPES - GO:0030234 COMMON-NAME - ornithine decarboxylase regulator activity // UNIQUE-ID - GO:0043028 TYPES - GO:0030234 COMMON-NAME - caspase regulator activity // UNIQUE-ID - GO:0000156 TYPES - GO:0004871 TYPES - GO:0030528 COMMON-NAME - two-component response regulator activity // UNIQUE-ID - GO:0003702 TYPES - GO:0030528 COMMON-NAME - RNA polymerase II transcription factor activity // UNIQUE-ID - GO:0003709 TYPES - GO:0030528 COMMON-NAME - RNA polymerase III transcription factor activity // UNIQUE-ID - GO:0003711 TYPES - GO:0030528 COMMON-NAME - transcription elongation regulator activity SYNONYMS - transcription elongation factor activity SYNONYMS - transcriptional elongation regulator activity // UNIQUE-ID - GO:0003715 TYPES - GO:0030528 COMMON-NAME - transcription termination factor activity SYNONYMS - transcriptional termination factor activity // UNIQUE-ID - GO:0016563 TYPES - GO:0030528 COMMON-NAME - transcription activator activity SYNONYMS - transcription activating factor SYNONYMS - transcriptional activator activity // UNIQUE-ID - GO:0016564 TYPES - GO:0030528 COMMON-NAME - transcription repressor activity // UNIQUE-ID - GO:0016986 TYPES - GO:0030528 COMMON-NAME - transcription initiation factor activity SYNONYMS - transcriptional initiation factor activity // UNIQUE-ID - GO:0030371 TYPES - GO:0045182 COMMON-NAME - translation repressor activity // UNIQUE-ID - GO:0004871 TYPES - GO:0060089 COMMON-NAME - signal transducer activity COMMENT - Ligands do NOT have the molecular function 'signal transducer activity'. SYNONYMS - SAP kinase 3 activity SYNONYMS - SAP kinase 4 activity SYNONYMS - SAP kinase 5 activity // UNIQUE-ID - GO:0030529 TYPES - GO:0044424 TYPES - GO:0032991 COMMON-NAME - ribonucleoprotein complex SYNONYMS - RNP // UNIQUE-ID - GO:0043234 TYPES - GO:0032991 COMMON-NAME - protein complex COMMENT - Note that although at some level almost all cellular components can be thought of as protein complexes, this term is intended to exclude structures composed of the same repeating subunit or subunits, for example microtubules. Protein complexes encompassed by this term are generally not structural, and usually have a defined set of subunits. // UNIQUE-ID - GO:0043227 TYPES - GO:0043226 COMMON-NAME - membrane-bounded organelle // UNIQUE-ID - GO:0043228 TYPES - GO:0043226 COMMON-NAME - non-membrane-bounded organelle // UNIQUE-ID - GO:0043229 TYPES - GO:0044424 TYPES - GO:0043226 COMMON-NAME - intracellular organelle // UNIQUE-ID - GO:0031090 TYPES - GO:0016020 TYPES - GO:0044422 COMMON-NAME - organelle membrane // UNIQUE-ID - GO:0000267 TYPES - GO:0044464 COMMON-NAME - cell fraction COMMENT - Note that this term refers to disrupted cells, and does not necessarily correspond to any specific structure(s) in an intact cell. // UNIQUE-ID - GO:0005622 TYPES - GO:0044464 COMMON-NAME - intracellular SYNONYMS - protoplasm // UNIQUE-ID - GO:0016020 TYPES - GO:0044464 COMMON-NAME - membrane // UNIQUE-ID - GO:0030312 TYPES - GO:0044464 COMMON-NAME - external encapsulating structure // UNIQUE-ID - GO:0031975 TYPES - GO:0044464 COMMON-NAME - envelope // UNIQUE-ID - GO:0044424 TYPES - GO:0044464 COMMON-NAME - intracellular part // UNIQUE-ID - GO:0044425 TYPES - GO:0044464 COMMON-NAME - membrane part // UNIQUE-ID - GO:0044462 TYPES - GO:0044464 COMMON-NAME - external encapsulating structure part // UNIQUE-ID - GO:0050874 TYPES - GO:0007582 COMMON-NAME - organismal physiological process // UNIQUE-ID - GO:0050875 TYPES - GO:0007582 TYPES - GO:0009987 COMMON-NAME - cellular physiological process SYNONYMS - cell growth and/or maintenance SYNONYMS - cell physiology // UNIQUE-ID - GO:0000051 TYPES - GO:0008152 COMMON-NAME - urea cycle intermediate metabolic process // UNIQUE-ID - GO:0006066 TYPES - GO:0008152 COMMON-NAME - alcohol metabolic process // UNIQUE-ID - GO:0006807 TYPES - GO:0008152 COMMON-NAME - nitrogen compound metabolic process COMMENT - Note that amino acid and derivative metabolism should not be annotated here. Instead use the 'amino acid and derivative metabolism' node. // UNIQUE-ID - GO:0009056 TYPES - GO:0008152 COMMON-NAME - catabolic process // UNIQUE-ID - GO:0009058 TYPES - GO:0008152 COMMON-NAME - biosynthetic process SYNONYMS - anabolism // UNIQUE-ID - GO:0019637 TYPES - GO:0008152 COMMON-NAME - organophosphate metabolic process SYNONYMS - organophosphate metabolism // UNIQUE-ID - GO:0019748 TYPES - GO:0008152 COMMON-NAME - secondary metabolic process // UNIQUE-ID - GO:0043170 TYPES - GO:0008152 COMMON-NAME - macromolecule metabolic process // UNIQUE-ID - GO:0044237 TYPES - GO:0008152 TYPES - GO:0009987 COMMON-NAME - cellular metabolic process // UNIQUE-ID - GO:0044238 TYPES - GO:0008152 COMMON-NAME - primary metabolic process // UNIQUE-ID - GO:0007154 TYPES - GO:0009987 COMMON-NAME - cell communication // UNIQUE-ID - GO:0034621 TYPES - GO:0009987 TYPES - GO:0043933 COMMON-NAME - cellular macromolecular complex subunit organization SYNONYMS - cellular macromolecular complex organization SYNONYMS - cellular macromolecular complex subunit organisation // UNIQUE-ID - GO:0051301 TYPES - GO:0009987 COMMON-NAME - cell division // UNIQUE-ID - GO:0051716 TYPES - GO:0009987 TYPES - GO:0050896 COMMON-NAME - cellular response to stimulus // UNIQUE-ID - GO:0070882 TYPES - GO:0071554 TYPES - GO:0009987 COMMON-NAME - cellular cell wall organization or biogenesis // UNIQUE-ID - GO:0042546 TYPES - GO:0070882 TYPES - GO:0044085 COMMON-NAME - cell wall biogenesis SYNONYMS - cell wall assembly // UNIQUE-ID - GO:0022607 TYPES - GO:0016043 COMMON-NAME - cellular component assembly SYNONYMS - cell structure assembly // UNIQUE-ID - GO:0043933 TYPES - GO:0016043 COMMON-NAME - macromolecular complex subunit organization SYNONYMS - GO:0034600 SYNONYMS - macromolecular complex organization SYNONYMS - macromolecular complex subunit organisation // UNIQUE-ID - GO:0045229 TYPES - GO:0016043 COMMON-NAME - external encapsulating structure organization // UNIQUE-ID - GO:0003008 TYPES - GO:0032501 COMMON-NAME - system process SYNONYMS - organ system process // UNIQUE-ID - GO:0007275 TYPES - GO:0032502 TYPES - GO:0032501 COMMON-NAME - multicellular organismal development COMMENT - Note that this term was 'developmental process'. // UNIQUE-ID - GO:0048856 TYPES - GO:0032502 COMMON-NAME - anatomical structure development COMMENT - This term was added by GO_REF:0000021. SYNONYMS - development of an anatomical structure // UNIQUE-ID - GO:0006950 TYPES - GO:0050896 COMMON-NAME - response to stress // UNIQUE-ID - GO:0009605 TYPES - GO:0050896 COMMON-NAME - response to external stimulus // UNIQUE-ID - GO:0009607 TYPES - GO:0050896 COMMON-NAME - response to biotic stimulus // UNIQUE-ID - GO:0009628 TYPES - GO:0050896 COMMON-NAME - response to abiotic stimulus // UNIQUE-ID - GO:0009719 TYPES - GO:0050896 COMMON-NAME - response to endogenous stimulus // UNIQUE-ID - GO:0042221 TYPES - GO:0050896 COMMON-NAME - response to chemical stimulus // UNIQUE-ID - GO:0006810 TYPES - GO:0051234 COMMON-NAME - transport // UNIQUE-ID - GO:0050789 TYPES - GO:0065007 COMMON-NAME - regulation of biological process SYNONYMS - regulation // UNIQUE-ID - GO:0071555 TYPES - GO:0071554 COMMON-NAME - cell wall organization SYNONYMS - cell wall organisation // UNIQUE-ID - Amino-Acid-Biosynthesis TYPES - Biosynthesis COMMON-NAME - Amino acids Biosynthesis COMMENT - This class contains the pathways of biosynthesis of each of the 21 amino acids present normally in proteins. // UNIQUE-ID - Aminoacyl-tRNAs-Charging TYPES - Biosynthesis COMMON-NAME - Aminoacyl-tRNA Charging COMMENT - This class contains the set of reactions by which the various amino acids become bonded to their corresponding tRNAs; the products of these reactions recognize cognate codons in mRNAs present in ribosomes and react there, forming peptide bonds, thereby, lengthening a growing polypeptide. SYNONYMS - Aminoacyl-tRNA Biosynthesis // UNIQUE-ID - AROMATIC-COMPOUNDS-BIOSYN TYPES - Biosynthesis COMMON-NAME - Aromatic Compounds Biosynthesis COMMENT - This class contains pathways of the biosynthesis of aromatic compounds, some of which play regulatory roles in cellular growth. Pathways of biosynthesis of hormones, secondary metabolites, and siderophores, some of which are aromatic, are found in other classes. // UNIQUE-ID - Carbohydrates-Biosynthesis TYPES - Biosynthesis COMMON-NAME - Carbohydrates Biosynthesis // UNIQUE-ID - Cell-Structure-Biosynthesis TYPES - Biosynthesis COMMON-NAME - Cell structures Biosynthesis COMMENT - This class contains pathways of biosynthesis of cellular organelles, including components of cell walls and substances associated with them. // UNIQUE-ID - Cofactor-Biosynthesis TYPES - Biosynthesis COMMON-NAME - Cofactors, Prosthetic Groups, Electron Carriers Biosynthesis COMMENT - This class contains pathways of biosynthesis of small molecules, including cofactors, prosthetic groups, electron carriers and vitamins, that participate in enzyme reactions. / // UNIQUE-ID - HORMONE-SYN TYPES - Biosynthesis COMMON-NAME - Hormones Biosynthesis COMMENT - This class contains pathways of biosynthesis of various hormones, molecules that regulate particular metabolic functions. // UNIQUE-ID - Lipid-Biosynthesis TYPES - Biosynthesis COMMON-NAME - Fatty Acids and Lipids Biosynthesis COMMENT - This class contains pathways of synthesis of various fatty acids and other lipids, including phospholipids, lipid A, and neutral fats and oils. Synthesis of the waxy materials on the surfaces of leaves are including here as well as in the class, "Epidermal structures". Lipids fulfill many functions, including being components of the plasma membrane of all cells and the outer membrane of Gram-negative bacteria. / // UNIQUE-ID - Metabolic-Regulators TYPES - Biosynthesis COMMON-NAME - Metabolic Regulators Biosynthesis // UNIQUE-ID - Nucleotide-Biosynthesis TYPES - Biosynthesis COMMON-NAME - Nucleosides and Nucleotides Biosynthesis COMMENT - This class contains the pathways of synthesis of the 8 nucleoside triphosphates that are the building blocks of RNA and DNA. // UNIQUE-ID - Other-biosynthesis TYPES - Biosynthesis COMMON-NAME - Other Biosynthesis COMMENT - This class contains pathways of synthesis of compounds with structures or functions unlike those in any of the other classes within the Biosynthesis group. // UNIQUE-ID - Polyamine-Biosynthesis TYPES - Biosynthesis COMMON-NAME - Amines and Polyamines Biosynthesis COMMENT - This class contains pathways of the biosynthesis of amines and polyamines. These compounds play a variety of roles in metabolism, including acting as osmoprotectants, keeping DNA in a condensed state, and serving as intermediates in the synthesis of macromolecules. // UNIQUE-ID - SECONDARY-METABOLITE-BIOSYNTHESIS TYPES - Biosynthesis COMMON-NAME - Secondary Metabolites Biosynthesis COMMENT - This class contains pathways of biosynthesis of compounds, derived from primary metabolic routes but not directly involved in growth and development of an organism. The universe of secondary metabolites is not unique to all organisms and differs in amount, chemical makeup and distribution. // UNIQUE-ID - Siderophores-Biosynthesis TYPES - Biosynthesis COMMON-NAME - Siderophore Biosynthesis COMMENT - This class contains pathways of biosynthesis of various siderophores, which are iron-chelating agents that aid cells in acquiring this essential nutrient, which frequently is available in the external environment only as highly insoluble iron oxide. // UNIQUE-ID - Alcohol-Degradation TYPES - Degradation COMMON-NAME - Alcohols Degradation COMMENT - This class contains pathways of degradation of various monohydric, dihydric, and trihydric alcohols, yielding a source of nutrients and energy. Pathways of degradation of polyhydric alcohols are shown under the class, "Sugar alcohols". // UNIQUE-ID - Aldehyde-Degradation TYPES - Degradation COMMON-NAME - Aldehyde Degradation // UNIQUE-ID - AMINE-DEG TYPES - Degradation COMMON-NAME - Amines and Polyamines Degradation COMMENT - This class contains pathways of degradation of various amines (primary, secondary, quaternary, aliphatic, and aromatic) with the exception of amino acids, to utilize them as sources of nutrients and energy. Pathways of the degradation of amino acids are shown in a separate class; those involving degradation of aromatic amines are also included in the "Aromatic compounds" class. COMMENT - This class includes pathways for degradations of amines other than amino /acids, and for polyamines. / // UNIQUE-ID - Amino-Acid-Degradation TYPES - Degradation COMMON-NAME - Amino Acids Degradation COMMENT - This class contains pathways of the degradation of various amino acids, not all of which occur in proteins, to utilize them as sources of nutrients and energy. // UNIQUE-ID - AROMATIC-COMPOUNDS-DEGRADATION TYPES - Degradation COMMON-NAME - Aromatic Compounds Degradation COMMENT - This class contains pathways of degradation of various aromatic compounds, including heterocyclic compounds and those that contain sulfur. The pathways provide a source of nutrients and energy. // UNIQUE-ID - C1-COMPOUNDS TYPES - Degradation COMMON-NAME - C1 Compounds Utilization and Assimilation COMMENT - This class contains pathways of utilization of C1 compounds, including the several pathways of CO2 fixation, as well as pathways for utilization of carbon monoxide, formaldehyde, and methanol. // UNIQUE-ID - Carbohydrates-Degradation TYPES - Degradation COMMON-NAME - Carbohydrates Degradation // UNIQUE-ID - CARBOXYLATES-DEG TYPES - Degradation COMMON-NAME - Carboxylates Degradation COMMENT - This class contains pathways of utilization of aliphatic carboxylates to be utilized as sources of nutrients and energy. Pathways of utilization of aromatic carboxylates are shown under the "Aromatic compounds" class. // UNIQUE-ID - CHLORINATED-COMPOUNDS-DEG TYPES - Degradation COMMON-NAME - Chlorinated Compounds Degradation COMMENT - This class contains pathways of utilization of various aliphatic and aromatic chlorinated compounds to provide nutrients and energy. // UNIQUE-ID - COFACTOR-DEGRADATION TYPES - Degradation COMMON-NAME - Cofactors, Prosthetic Groups, Electron Carriers Degradation // UNIQUE-ID - Fatty-Acid-and-Lipid-Degradation TYPES - Degradation COMMON-NAME - Fatty Acid and Lipids Degradation COMMENT - This class contains pathways by which various fatty acids and other lipids, including phospholipids, are degraded to serve and sources of nutrients and energy. / // UNIQUE-ID - HORMONE-DEG TYPES - Degradation COMMON-NAME - Hormones Degradation COMMENT - This class contains pathways of the degradation of various hormones, signal molecules, in different species. // UNIQUE-ID - Noncarbon-Nutrients TYPES - Degradation COMMON-NAME - Inorganic Nutrients Metabolism COMMENT - This class contains pathways of assimilation of non-carbon nutrients, principally nitrogen, sulfur, and phosphorus. // UNIQUE-ID - NUCLEO-DEG TYPES - Degradation COMMON-NAME - Nucleosides and Nucleotides Degradation and Recycling COMMENT - This class contains pathways by which various nucleosides and nucleotides are metabolized to serve as sources of nutrients and energy or to produce nucleic acid bases that are subsequently assimilated. // UNIQUE-ID - Other-Degradation TYPES - Degradation COMMON-NAME - Degradation/Utilization/Assimilation - Other COMMENT - This class contains pathways of degradation of substrates with chemical compositions that do not fit into any of the other classes within the degradation/utilization/assimilation group. // UNIQUE-ID - Polymer-Degadation TYPES - Degradation COMMON-NAME - Polymeric Compounds Degradation COMMENT - This class includes pathways for the degradation of complex polymers // UNIQUE-ID - SECONDARY-METABOLITE-DEGRADATION TYPES - Degradation COMMON-NAME - Secondary Metabolites Degradation COMMENT - This class contains pathways of degradation of compounds, derived from primary metabolic routes but not directly involved in growth and development of an organism. // UNIQUE-ID - Acid-Resistance TYPES - Detoxification COMMON-NAME - Acid Resistance COMMENT - This class holds pathways that confer acid resistance on the organism // UNIQUE-ID - Arsenate-Detoxification TYPES - Detoxification COMMON-NAME - Arsenate Detoxification COMMENT - This class contains pathways for arsenate detoxification // UNIQUE-ID - Mercury-Detoxification TYPES - Detoxification COMMON-NAME - Mercury Detoxification // UNIQUE-ID - Methylglyoxal-Detoxification TYPES - Detoxification COMMON-NAME - Methylglyoxal Detoxification COMMENT - This class holds pathways for the detoxification of methylglyoxal // UNIQUE-ID - CHEMOAUTOTROPHIC-ENERGY-METABOLISM TYPES - Energy-Metabolism COMMON-NAME - Chemoautotrophic Energy Metabolism COMMENT - This class contains pathways of utilization of various inorganic compounds to be utilized as sources of energy. // UNIQUE-ID - Electron-Transfer TYPES - Energy-Metabolism COMMON-NAME - Electron Transfer COMMENT - This class holds pathways that describe electron transfer chains // UNIQUE-ID - Fermentation TYPES - Energy-Metabolism COMMENT - This class contains pathways by which various organisms anaerobically metabolize substrates to generate metabolic energy by substrate-level phosphorylation. At some point fermentations intersect central metabolism to form precursor metabolites. // UNIQUE-ID - GLYCOLYSIS-VARIANTS TYPES - Energy-Metabolism COMMON-NAME - Glycolysis // UNIQUE-ID - METHANOGENESIS TYPES - Energy-Metabolism COMMON-NAME - Methanogenesis COMMENT - This class contains the pathways by which the methanogenic archaea produce their metabolic endproduct, methane, from various substrates to generate energy. Methanogens assimilate carbon through other pathways. // UNIQUE-ID - OTHER-ENERGY TYPES - Energy-Metabolism COMMON-NAME - Other COMMENT - This class contains pathways that generate energy from inorganic substrates by means other than respiration. // UNIQUE-ID - Pentose-Phosphate-Cycle TYPES - Energy-Metabolism COMMON-NAME - Pentose Phosphate Pathways COMMENT - This class contains various aspects of the pentose phosphate including its oxidative and reductive components. The pentose phosphate pathway is part of central metabolism. It plays the essential role of supplying three, ribose-5-phosphate, erythrose-4-phospahte and sedoheptulose-7-phosphate, of the 13 precursor metabolites. It also is the major generator of NADPH. // UNIQUE-ID - Photosynthesis TYPES - Energy-Metabolism COMMENT - This class contains pathways associated in various organisms with photosynthesis, including those of carbon dioxide fixation, electron flow and photoprotection. // UNIQUE-ID - Respiration TYPES - Energy-Metabolism COMMENT - This class contains pathways of respiration by which various organisms generate, both aerobically and anaerobically, a trans-membrane ion gradient to serve as a source of energy. // UNIQUE-ID - TCA-VARIANTS TYPES - Energy-Metabolism COMMON-NAME - TCA cycle COMMENT - This class contains forms of the TCA cycle, a component of central metabolism, that operate under various conditions, including aerobic and anaerobic growth. It also contains the linker reactions between glycolysis and the TCA cycle that convert pyruvate to acetyl-CoA. Reactions of the TCA cycle yield three precursor metabolites, alpha-oxoglutarate, succinyl-CoA, and oxaloacetate. The variations of the cycle function to synthesize these precursor metabolites under diverse conditions, for example anaerobiosis, when the complete cycle cannot function. // UNIQUE-ID - Complex-Processes TYPES - Reactions-Classified-By-Conversion-Type COMMENT - Each instance of this class represents a complex, multistep, black-box process. Details of the process may or may not /actually be known, but are not described in this frame. Therefore, the entire process is considered to be a black box that /we cannot see within. Examples of processes that might be represented in this manner are protein degradation, /transcription and translation. When it is not clear whether a given transition is caused by a single reaction or /by a complex process, use Unknown-Conversions. / // UNIQUE-ID - Simple-Reactions TYPES - Reactions-Classified-By-Conversion-Type COMMENT - An instance of this class should be a single reaction involving only a small number of defined participants, /in contrast to large complicated processes that can be better classified under the Complex-Processes /class (e.g., transcription or translation). Simple-Reactions should be considered indivisible at the current level of abstraction, /but it is possible to define a decomposition of a simple reaction into a lower level set of sub-reactions, that /exist at a different level of abstraction. Simple-Reactions are therefore simple in comparison to /Complex-Processes, not because they cannot be decomposed. / // UNIQUE-ID - Unknown-Conversions TYPES - Reactions-Classified-By-Conversion-Type COMMENT - Instances of this class define conversions for which it is not known whether the transformation /occurs as a complex process or as a single reaction step. An example is the conversion /of an inactive form of a protein to an active form, when the exact chemical forms of the protein, and the nature /of the transition from one form to the other are not known. For transformations that are known /to be multistep, use Complex-Processes class instead. // UNIQUE-ID - Macromolecule-Reactions TYPES - Reactions-Classified-By-Substrate COMMENT - Reactions in which one or more participants are macromolecules. This class and Small-Molecule-Reactions /are completely disjoint. // UNIQUE-ID - Small-Molecule-Reactions TYPES - Reactions-Classified-By-Substrate COMMENT - Reactions in which all participants are small molecules. // UNIQUE-ID - TAX-2 TYPES - TAX-131567 COMMON-NAME - Bacteria SYNONYMS - not Bacteria Haeckel 1894 SYNONYMS - eubacteria SYNONYMS - bacteria // UNIQUE-ID - TAX-2759 TYPES - TAX-131567 COMMON-NAME - Eukaryota SYNONYMS - eukaryotes SYNONYMS - eucaryotes SYNONYMS - Eukaryotae SYNONYMS - Eukarya SYNONYMS - Eucaryotae SYNONYMS - Eucarya // UNIQUE-ID - Genes TYPES - All-Genes COMMENT - This class describes functional genes (it excludes, for example, pseudogenes) /that code for protein and RNA products. Genes of known function are /classified into one or more applicable classes under MultiFun, a gene /ontology developed by M. Riley. Genes whose function is unknown or known /only approximately are assigned to the subclasses ORFs and Unclassified-Genes, /respectively. GO (Gene Ontology) assignments are implemented using the /GO-TERMS slot within gene products. / // UNIQUE-ID - Phantom-Genes TYPES - All-Genes COMMENT - Phantom genes are regions of DNA that were once thought to be genes /(such as because they were identified as genes by a computational /gene-finding program), but that are not currently /thought to be functional genes, for example because their expression has never /been observed. They are maintained in the database to maintain a /record of their past versus current status. / // UNIQUE-ID - Pseudo-Genes TYPES - All-Genes COMMENT - Pseudo genes are regions of DNA that show sequence similarity to other functional genes, but that /are not in fact functional genes. A pseudogene might be nonfunctional because of sequence /changes that prevent its transcription or translation, such as by disrupting its promoter /or by introducing a premature stop codon. / // UNIQUE-ID - Rho-Dependent-Terminators TYPES - Terminators // UNIQUE-ID - Rho-Independent-Terminators TYPES - Terminators // UNIQUE-ID - Catalytic-Domains TYPES - Conserved-Regions COMMENT - Defines a domain that is associated with a particular catalytic activity. In a multifunctional /protein, this feature can be used to associate different regions of a protein with different /activities via the CATALYTIC-ACTIVITY slot. // UNIQUE-ID - Ca-Binding-Regions TYPES - Protein-Binding-Regions COMMENT - Calcium-binding region on a polypeptide // UNIQUE-ID - DNA-Binding-Regions TYPES - Protein-Binding-Regions COMMENT - DNA-binding region on a polypeptide // UNIQUE-ID - Flavin-Binding-Regions TYPES - Protein-Binding-Regions COMMENT - Flavin binding region on a polypeptide // UNIQUE-ID - Nucleotide-Phosphate-Binding-Regions TYPES - Protein-Binding-Regions COMMENT - Nucleotide-phosphate-binding region on a polypeptide // UNIQUE-ID - Alpha-Helix-Regions TYPES - Protein-Structure-Regions COMMENT - Regions of a protein that form alpha helical secondary structure motifs. // UNIQUE-ID - Beta-Strand-Regions TYPES - Protein-Structure-Regions COMMENT - Regions of a protein that form beta strand secondary structure motifs. // UNIQUE-ID - Coiled-Coil-Regions TYPES - Protein-Structure-Regions COMMENT - A protein segment that denotes the regions of a coiled-coil super-secondary structural motif. // UNIQUE-ID - Turn-Regions TYPES - Protein-Structure-Regions COMMENT - Regions of a protein that form hydrogen-bonded turn secondary structure motifs. // UNIQUE-ID - Experimental-Sequence-Variants TYPES - Sequence-Variants COMMENT - Regions of sequence difference that are due to experimental variation, such as intentional /mutagenesis, sequence uncertainty, and conflicts in sequence data. // UNIQUE-ID - Extrinsic-Sequence-Variants TYPES - Sequence-Variants COMMENT - Natural protein sequence variations that arise from genome-level differences such as /polymorphisms, variations between strains, isolates, cultivars, and disease-associated /mutations. // UNIQUE-ID - Intrinsic-Sequence-Variants TYPES - Sequence-Variants COMMENT - Alternative protein isoform sequences that arise from a single genome due to events /such as alternative splicing, alternative promoter usage, alternative initiation, and ribosomal frameshifting. // UNIQUE-ID - Glycosylation-Sites TYPES - Amino-Acid-Sites-That-Bind COMMENT - Attachment of a glycan (mono- or polysaccharide) to this site. /Linkage can be either C-, N- or O-linked. // UNIQUE-ID - Lipid-Binding-Sites TYPES - Amino-Acid-Sites-That-Bind COMMENT - Covalent binding of a lipid moiety // UNIQUE-ID - Metal-Binding-Sites TYPES - Amino-Acid-Sites-That-Bind COMMENT - Binding site for a metal ion. // UNIQUE-ID - Disulfide-Bond-Sites TYPES - Crosslink-Sites COMMENT - A cysteine residue that forms a disulfide bond with another cysteine residue either on the same polypeptide or on a different one. // UNIQUE-ID - Intrachain-Crosslinks TYPES - Crosslink-Sites COMMENT - The two designated residues are linked by an intrachain bond. // UNIQUE-ID - Interchain-Disulfide-Bonds TYPES - Disulfide-Bond-Sites TYPES - Interchain-Crosslinks COMMENT - A disulfide bond is formed between the one specified cysteine residue on this chain /and a cysteine residue on another chain. The value of the ATTACHED-GROUP slot /should be another instance of Interchain-Disulfide-Bonds. // UNIQUE-ID - Acetylation-Modifications TYPES - Modified-Residues COMMENT - Acetylation, N-terminal or other. // UNIQUE-ID - Amidation-Modifications TYPES - Modified-Residues COMMENT - Amidation, generally at the C-terminal of a mature active peptide. // UNIQUE-ID - Blocking-Modifications TYPES - Modified-Residues COMMENT - Undetermined N- or C-terminal blocking group. // UNIQUE-ID - Formylation-Modifications TYPES - Modified-Residues COMMENT - Formylation of the N-terminal methionine. // UNIQUE-ID - Gamma-Carboxyglutamic-Acid-Modifications TYPES - Modified-Residues COMMENT - Conversion of a glutamate residue to gamma-carboxyglutamic acid. // UNIQUE-ID - Glycyl-Radical-Modifications TYPES - Modified-Residues // UNIQUE-ID - Hydroxylation-Modifications TYPES - Modified-Residues COMMENT - Hydroxylation of an asparagine, aspartate, proline or lysine residue. // UNIQUE-ID - Methylation-Modifications TYPES - Modified-Residues COMMENT - Methylation, generally of lysine or arginine. // UNIQUE-ID - Phosphorylation-Modifications TYPES - Modified-Residues COMMENT - Phosphorylation of a serine, threonine, tyrosine, aspartate or histidine residue. // UNIQUE-ID - Pyro-Glu-Modifications TYPES - Modified-Residues COMMENT - N-terminal glutamine which has formed an internal cyclic lactam to become pyrrolidone carboxylic acid. // UNIQUE-ID - Sulfation-Modifications TYPES - Modified-Residues COMMENT - Sulfation, generally of tyrosine // UNIQUE-ID - Ubiquitination-Modifications TYPES - Modified-Residues COMMENT - Ubiquitination, usually of lysine // UNIQUE-ID - Protein-Mediated-Attenuation TYPES - Transcriptional-Attenuation COMMENT - In this class of attenuation, an RNA-binding protein will interact with the nascent transcript in order /to determine which of two competing RNA stem-loop structures form: a terminator (thereby terminating transcription) /or an antiterminator (thereby allowing transcription to continue). When acting as an activator, the protein /stabilizes the antiterminator, preventing terminator formation. When acting as an inhibitor, the protein /blocks antiterminator formation, allowing terminator formation. The regulator in these cases is the /RNA-binding protein and the regulated-entity is the terminator. // UNIQUE-ID - Rho-Blocking-Antitermination TYPES - Transcriptional-Attenuation COMMENT - Rho-dependent termination requires binding of the Rho hexamer upstream of terminator sites in a nascent transcript. /In this class of attenuation, a regulator molecule causes the ribosome to stall adjacent to the Rho-factor /binding site. This prevents Rho from binding, thereby preventing Rho-dependent termination, and /transcription continues.The regulator in this case is the regulator molecule, generally a protein, and the /regulated-entity is the Rho-dependent terminator. // UNIQUE-ID - Ribosome-Mediated-Attenuation TYPES - Transcriptional-Attenuation COMMENT - In this class of attenuation, the intracellular level of a charged tRNA determines whether or not the ribosome /pauses while synthesizing a leader peptide. The pause site consists of a series of one or more codons for a /particular amino acid. The ribosome, which moves sequentially along the transcript, synthesizing protein, must /wait for a tRNA charged with that amino acid before it can proceed further. Thus, the intracellular level /of that amino acid determines how much charged tRNA is available, and therefore whether or not the /ribosome pauses. The newly forming mRNA transcript can adopt one of two competing stem-loop conformations, a /terminator or an antiterminator structure. In all cases described so far, pausing favors the formation of /an antiterminator structure, thus preventing terminator formation, and allowing gene expression. The regulator /in this case will be the particular charged tRNA, and the regulated-entity is the terminator. // UNIQUE-ID - RNA-Mediated-Attenuation TYPES - Transcriptional-Attenuation COMMENT - In this class of attenuation, the attenuator consists of two competing stem-loop structures in the mRNA: an /antiterminator, which allows further transcription, and a terminator, which ends it. An RNA pairs with a /region on the leader transcript to either stabilize or block the formation of an antiterminator, thus preventing /or allowing formation of the competing terminator, and consequently activating or inhibiting transcription. /Examples include the binding of an uncharged tRNA to a T box region on the leader transcript to stabilize an /antiterminator, or the pairing of an antisense RNA with its complementary strand to block antiterminator formation. /The regulator in these cases is an RNA and the regulated-entity is the terminator. // UNIQUE-ID - RNA-Polymerase-Modification TYPES - Transcriptional-Attenuation COMMENT - In this class of attenuation, a regulatory protein binds to a site in a transcription unit and interacts with /RNA polymerase, such that the modified RNA polymerase is no longer sensitive to termination signals, /and transcription continues past one or more terminators. The regulator is the regulatory protein and the /regulated-entity is a terminator. // UNIQUE-ID - Small-Molecule-Mediated-Attenuation TYPES - Transcriptional-Attenuation COMMENT - In this class of attenuation, the mRNA leader transcript can bind directly to small molecule ligands /(the mRNA region in this case is also known as a riboswitch). This binding determines which of two /mutually exclusive RNA structures forms, a terminator or an antiterminator. If the small molecule /blocks antiterminator formation and thereby promotes terminator formation, it will inhibit transcription. /If it promotes antiterminator formation, it activates transcription beyond the terminator region. // UNIQUE-ID - CCO-LEUCOPLAST TYPES - CCO-PLASTID COMMON-NAME - leucoplast // UNIQUE-ID - CCO-COATED-VES TYPES - CCO-VESICLE COMMON-NAME - coated vesicle // UNIQUE-ID - CCO-ENDOCYT-VES TYPES - CCO-VESICLE COMMON-NAME - endocytic vesicle // UNIQUE-ID - CCO-GOLGI-VES TYPES - CCO-VESICLE COMMON-NAME - Golgi vesicle // UNIQUE-ID - All-Carboxy-Acids TYPES - Acids COMMON-NAME - all carboxy acids // UNIQUE-ID - Mercapturates TYPES - Acids COMMON-NAME - a mercapturate SYNONYMS - a mercapturic acid // UNIQUE-ID - Teichoic-Acid TYPES - Acids COMMON-NAME - a teichoic acid // UNIQUE-ID - Monocarboxylic-Acid-Amides TYPES - Amides TYPES - All-Carboxy-Acids COMMON-NAME - a monocarboxylic-acid-amide // UNIQUE-ID - Amino-alcohols TYPES - Alcohols COMMON-NAME - an amino alcohol // UNIQUE-ID - Cyclitols TYPES - Alcohols COMMON-NAME - a cyclitol // UNIQUE-ID - DL-12-Propanediol TYPES - Alcohols // UNIQUE-ID - glycols TYPES - Alcohols COMMON-NAME - a glycol // UNIQUE-ID - Monoterpenols TYPES - Alcohols TYPES - Monoterpene-Derivatives COMMON-NAME - a monoterpenol SYNONYMS - an oxygenated monoterpene // UNIQUE-ID - Primary-Alcohols TYPES - Alcohols COMMON-NAME - a primary alcohol SYNONYMS - 1-Alcohol // UNIQUE-ID - Sesquiterpenols TYPES - Sesquiterpenoid-Derivatives TYPES - Alcohols COMMON-NAME - a sesquiterpenol // UNIQUE-ID - Sugar-alcohols TYPES - Sugar TYPES - Alcohols COMMON-NAME - a sugar alcohol SYNONYMS - polyalcohol SYNONYMS - polyhydric alcohol SYNONYMS - polyol // UNIQUE-ID - Aldehydes TYPES - Aldehydes-Or-Ketones COMMON-NAME - an aldehyde SYNONYMS - aldehyde SYNONYMS - RCHO // UNIQUE-ID - KETONE TYPES - Aldehydes-Or-Ketones COMMON-NAME - a methyl-ethyl-ketone // UNIQUE-ID - LONG-CHAIN-KETONE TYPES - Aldehydes-Or-Ketones COMMON-NAME - a ketone // UNIQUE-ID - Aliphatic-Amines TYPES - All-Amines COMMON-NAME - an aliphatic amine SYNONYMS - RCH2NH2 SYNONYMS - RCH(2)NH(2) // UNIQUE-ID - Alkylamines TYPES - All-Amines COMMON-NAME - an alkylamine // UNIQUE-ID - Amine-Donors TYPES - All-Amines COMMON-NAME - an amine donor // UNIQUE-ID - Aryl-Amines TYPES - All-Amines TYPES - Aromatics COMMON-NAME - an arylamine COMMENT - This compound class collects various aryl amines. SYNONYMS - an aniline // UNIQUE-ID - Monoamines TYPES - All-Amines COMMON-NAME - a monoamine // UNIQUE-ID - Polyamines TYPES - All-Amines COMMON-NAME - a polyamine // UNIQUE-ID - Primary-Amines TYPES - All-Amines COMMON-NAME - a primary amine // UNIQUE-ID - Amino-Acid-Derivatives TYPES - All-Amino-Acids COMMON-NAME - an amino acid derivative COMMENT - This class contains derivatives of amino acids. These compounds are derived from amino acids, /but are no longer classified as amino acids, as they do not contain both an amine and a carboxyl functional groups. // UNIQUE-ID - Amino-Acids TYPES - All-Amino-Acids COMMON-NAME - an amino acid COMMENT - This class contains all of the amino acids, defined as any molecule that contains both amine and /carboxyl functional groups. The class includes both α amino acids, in which both functional /groups are attached to the same carbon atom, and non-α amino acids, in which the groups are /attached to different carbon atoms. / // UNIQUE-ID - Protein-Amino-Acids TYPES - All-Amino-Acids COMMON-NAME - an amino acid within a protein COMMENT - This class represents amino acids that are within a larger protein. /(It does not represent the free form of the 20 amino acids that are naturally /incorporated within proteins). / SYNONYMS - a peptidyl-L-amino acid // UNIQUE-ID - Formate-acetyltrans-glycine-radical TYPES - Modified-Proteins TYPES - Protein-Glycines COMMON-NAME - [formate C acetyltransferase]-glycin -2-yl radical // UNIQUE-ID - Formate-acetyltransferase-glycine TYPES - Modified-Proteins TYPES - Protein-Glycines COMMON-NAME - [formate C acetyltransferase]-glycine // UNIQUE-ID - Aldonic-Acids TYPES - All-Carbohydrates COMMON-NAME - an aldonate COMMENT - Sugars that had their terminal aldehyde oxydized to a carboxylic acid. SYNONYMS - an aldonic acid // UNIQUE-ID - Carbohydrate-Derivatives TYPES - All-Carbohydrates COMMON-NAME - a carbohydrate derivative // UNIQUE-ID - Carbohydrates TYPES - All-Carbohydrates COMMON-NAME - a carbohydrate // UNIQUE-ID - Acyclonucleoside-Analogues TYPES - All-Nucleosides COMMON-NAME - an acyclonucleoside analogue // UNIQUE-ID - Base-Derivatives TYPES - All-Nucleosides COMMON-NAME - a base derivative // UNIQUE-ID - Bases TYPES - All-Nucleosides COMMON-NAME - a base COMMENT - Probably this class of aromatic bases should not be under the nucleosides, as this is not strictly correct. // UNIQUE-ID - Deoxynucleoside-Derivatives TYPES - All-Nucleosides COMMON-NAME - a deoxynucleoside derivative // UNIQUE-ID - Nucleosides TYPES - All-Nucleosides COMMON-NAME - a nucleoside SYNONYMS - nucleoside // UNIQUE-ID - Nucleotides TYPES - All-Nucleosides COMMON-NAME - a nucleotide SYNONYMS - nucleotide // UNIQUE-ID - Purine-Related TYPES - All-Nucleosides COMMON-NAME - a purine-related compound // UNIQUE-ID - Purines TYPES - All-Nucleosides COMMON-NAME - a purine COMMENT - Purines are heterocyclic aromatic compounds that contain a |FRAME: PYRIMIDINE-RING| ring fused to an /|FRAME: IMIDAZOLE-RING| ring. /Two of the bases in nucleic acids, adenine and guanine, are purines. // UNIQUE-ID - Pyrimidine-Related TYPES - All-Nucleosides COMMON-NAME - a pyrimidine-related compound // UNIQUE-ID - Pyrimidines TYPES - All-Nucleosides COMMON-NAME - a pyrimidine COMMENT - Pyrimidine is a heterocyclic aromatic compound similar to benzene, containing two nitrogen atoms /at positions 1 and 3 of the ring. /The name pyrimidines is also used for compounds derived from the basic pyrimidine compound, including three /of the bases found in nucleic acids, namely |FRAME: CYTOSINE|, |FRAME:THYMINE|, and /|FRAME: URACIL|. // UNIQUE-ID - Aliphatic-Amides TYPES - Amides COMMON-NAME - an aliphatic amide SYNONYMS - an aliphatic amide // UNIQUE-ID - Carboxamides TYPES - Amides COMMON-NAME - a carboxamide // UNIQUE-ID - Aromatic-Acid TYPES - Aromatics COMMON-NAME - an aromatic carboxylate SYNONYMS - an aromatic acid // UNIQUE-ID - Aromatic-Polymers TYPES - Aromatics COMMON-NAME - an aromatic polymer // UNIQUE-ID - Aryl-Alcohol TYPES - Aromatics COMMON-NAME - a phenol COMMENT - The R group in this structure contains an aromatic ring. SYNONYMS - an aromatic alcohol SYNONYMS - aryl alcohol SYNONYMS - an aryl alcohol // UNIQUE-ID - Aryl-Aldehyde TYPES - Aromatics COMMON-NAME - an aryl aldehyde COMMENT - The R group in this structure contains an aromatic ring. SYNONYMS - an aromatic aldehyde SYNONYMS - an aryl aldehyde // UNIQUE-ID - Aryl-Dialkyl-Phosphate TYPES - Aromatics COMMON-NAME - an aryl dialkyl phosphate // UNIQUE-ID - Aryl-Glucosides TYPES - Aromatics COMMON-NAME - an aryl glucoside // UNIQUE-ID - Aryl-Sulfate TYPES - Aromatics COMMON-NAME - an aromatic sulfate SYNONYMS - an aryl sulfate SYNONYMS - a phenol sulfate // UNIQUE-ID - Chloroaromatic-Compounds TYPES - Aromatics TYPES - Chlorides COMMON-NAME - a chloroaromatic compound // UNIQUE-ID - Fluoroaromatic-Compounds TYPES - Fluorides TYPES - Aromatics COMMON-NAME - a fluoroaromatic compound // UNIQUE-ID - Guaiacylglycerol-guaiacyl-ether TYPES - Aromatics COMMON-NAME - guaiacylglycerol-β-guaiacyl ether // UNIQUE-ID - Indoles TYPES - Aromatics COMMON-NAME - an indole // UNIQUE-ID - MPHPV TYPES - Aromatics COMMON-NAME - α-(2-methoxyphenoxy)-β-hydroxypropiovanillone SYNONYMS - MPHPV // UNIQUE-ID - N-Acetoxy-Arylamines TYPES - Aromatics COMMON-NAME - an N-acetoxyarylamine COMMENT - This compound class stands for generic and unspecified N-acetoxy-arylamines. SYNONYMS - N-acetoxyarylamine // UNIQUE-ID - Nitroaromatic-Ox-Compounds TYPES - Aromatics COMMON-NAME - an oxidized nitroaromatic compound COMMENT - This compound class stands for generic and unspecified oxidized nitroaromatic compounds. SYNONYMS - nitroaromatic compoundox // UNIQUE-ID - Nitroaromatic-Red-Compounds TYPES - Aromatics COMMON-NAME - a reduced nitroaromatic compound COMMENT - This compound class stands for generic and unspecified reduced nitroaromatic compounds. SYNONYMS - nitroaromatic compoundred // UNIQUE-ID - OXYGEN-HETEROCYCLES TYPES - Aromatics COMMON-NAME - an oxygen heterocycle // UNIQUE-ID - s-Triazines TYPES - Aromatics COMMON-NAME - s-triazine COMMENT - The s-triazine compounds have numerous applications throughout industry and agriculture. /Those containing N-alkyl substituents have been applied successfully as herbicides. // UNIQUE-ID - Coenzymes TYPES - Cofactors COMMON-NAME - a prosthetic group // UNIQUE-ID - All-Folates TYPES - Vitamins TYPES - Coenzymes COMMON-NAME - a folate // UNIQUE-ID - Electron-Acceptors TYPES - Acceptors COMMON-NAME - an electron acceptor SYNONYMS - an electron donor // UNIQUE-ID - Fructofuranosyl-Acceptors TYPES - Acceptors COMMON-NAME - a fructofuranosyl acceptors // UNIQUE-ID - Galactosyl-Acceptors TYPES - Acceptors COMMON-NAME - a galactosyl acceptor // UNIQUE-ID - Glucosyl-Acceptors TYPES - Acceptors COMMON-NAME - a glucosyl acceptor SYNONYMS - a glucosyl donor // UNIQUE-ID - Glucuronoside-Acceptors TYPES - Acceptors COMMON-NAME - a glucuronoside acceptor // UNIQUE-ID - Glutamyl-Acceptors TYPES - Acceptors COMMON-NAME - a glutamyl acceptor // UNIQUE-ID - Methyl-Acceptors TYPES - Acceptors COMMON-NAME - a methyl acceptor SYNONYMS - a methyl donor // UNIQUE-ID - Rhamonsyl-Acceptors TYPES - Acceptors COMMON-NAME - a rhamnosyl acceptors // UNIQUE-ID - Sulfur-Acceptors TYPES - Acceptors COMMON-NAME - a sulfur acceptor SYNONYMS - a sulfur donor // UNIQUE-ID - Acceptor TYPES - Electron-Acceptors TYPES - Redox-Electron-Carriers COMMON-NAME - an oxidized electron acceptor SYNONYMS - an acceptor SYNONYMS - an oxidized donor SYNONYMS - A // UNIQUE-ID - Donor-H2 TYPES - Electron-Acceptors TYPES - Redox-Electron-Carriers COMMON-NAME - a reduced electron acceptor SYNONYMS - reduced acceptor SYNONYMS - a reduced acceptor SYNONYMS - a donor SYNONYMS - A(H2) // UNIQUE-ID - Acetic-Esters TYPES - Esters COMMON-NAME - an acetic ester SYNONYMS - an acetyl ester // UNIQUE-ID - Aromatic-amino-acid-esters TYPES - Esters COMMON-NAME - an ester of aromatic amino acids // UNIQUE-ID - Carboxylic-esters TYPES - Esters COMMON-NAME - a carboxylic ester // UNIQUE-ID - Cholesterol-esters TYPES - Esters COMMON-NAME - a cholesterol ester // UNIQUE-ID - Glycerides TYPES - Esters TYPES - Lipids COMMON-NAME - a glyceride // UNIQUE-ID - Hydrophobic-amino-acid-esters TYPES - Esters COMMON-NAME - an ester of hydrophobic-amino acids // UNIQUE-ID - Lactones TYPES - Esters COMMON-NAME - a lactone COMMENT - A lactone is a cyclic ester, the product of condensation of an alcohol group and a carboxylate group /within the same molecule. / /There are several types of lactones - |FRAME: Beta-lactones| contain 3 carbons in the ring, /|FRAME:Gamma-lactones| contains 4, |FRAME:Delta-lactones| contains 5, and |FRAME:Epsilon-lactones| /contains 6 carbons. / /The most stable structure for lactones are γ-lactones and δ-lactones, because of the /minimal angle strain in their structure. In fact, γ-lactones are so stable that, in the presence of /dilute acids at room temperature, 4-hydroxy acids esterify and cyclize spontaneously to form lactones. /β-lactones, on the other hand, are not very stable. / /The name lactone is derived from the lactone of |FRAME: L-LACTATE|, which is called /|FRAME: CPD-9549|, although it is really a di-lactone. // UNIQUE-ID - O-Acyl-L-Carnitines TYPES - Esters COMMON-NAME - an O-acyl-L-carnitine COMMENT - This class contains |FRAME: CARNITINE| molecules esterified at the C3 hydroxyl to a wide range of acyl /groups, including acetyl, or short, medium, or long chain fatty acyl groups |CITS: [15591000] [11257506]|. // UNIQUE-ID - PHB TYPES - Esters COMMON-NAME - polyhydroxybutyrate SYNONYMS - PHB SYNONYMS - poly-3-hydroxybutyrate // UNIQUE-ID - Poly-3-hydroxyoctanoate TYPES - Esters COMMON-NAME - poly-3-hydroxyoctanoate // UNIQUE-ID - Retinyl-Esters TYPES - Esters COMMON-NAME - a retinyl ester SYNONYMS - an all-trans-retinyl ester // UNIQUE-ID - Steryl-Esters TYPES - Esters TYPES - Sterols COMMON-NAME - a steryl-ester SYNONYMS - a sterol ester // UNIQUE-ID - Thioesters TYPES - Esters COMMON-NAME - a thioester // UNIQUE-ID - Wax-Esters TYPES - Esters COMMON-NAME - a wax ester // UNIQUE-ID - Galactofuran TYPES - Glycolipids COMMON-NAME - a galactofuran SYNONYMS - a β-D-Galf-(1->6)-β-D-Galf-(1->5)-β-D-Galf-Rha-GlcNAc-P-P-C50 // UNIQUE-ID - Peptide-Group TYPES - Groups COMMON-NAME - a peptide SYNONYMS - a peptide group // UNIQUE-ID - Rings TYPES - Groups COMMON-NAME - a ring // UNIQUE-ID - Simple-Groups TYPES - Groups COMMON-NAME - a simple group // UNIQUE-ID - Sugar-Group TYPES - Groups COMMON-NAME - a sugar // UNIQUE-ID - 5-Halogenated-Analogs TYPES - Halides COMMON-NAME - a 5-halogenated analog // UNIQUE-ID - Chlorides TYPES - Halides COMMON-NAME - a chloride SYNONYMS - RCl // UNIQUE-ID - Fluorides TYPES - Halides COMMON-NAME - a fluoride // UNIQUE-ID - Ecdysteroids TYPES - Hormones COMMON-NAME - a ecdysteroid COMMENT - Ecdysteroids are insect moulting hormones. They act as moulting hormones of arthropods but also occur in other invertebrates where they can play different role. Ecdysteroids also appear in many plants mostly as a protection agents (toxins or antifeedants) against herbivore insects // UNIQUE-ID - INSECT-HORMONES TYPES - Hormones COMMON-NAME - an insect hormone // UNIQUE-ID - Plant-Hormones TYPES - Hormones COMMON-NAME - a plant hormone COMMENT - Plant hormones: Ethylene, Cytokinines, Auxins, Gibberellins, Brassinosteroids, abscisic acid // UNIQUE-ID - Brassinosteroids TYPES - Plant-Hormones TYPES - Steroids COMMON-NAME - a brassinosteroids // UNIQUE-ID - Alkanes TYPES - Hydrocarbons COMMON-NAME - an alkane COMMENT - Alkanes are saturated acyclic hydrocarbons. // UNIQUE-ID - Olefins TYPES - Hydrocarbons COMMON-NAME - an olefin COMMENT - This class includes hydrocarbons that have one or more carbon-carbon double bond, /not including formal double bonds in aromatic compounds. Members of this class may be /cyclic or acyclic. // UNIQUE-ID - Carboxylate-siderophores TYPES - Siderophore TYPES - Hydroxamates COMMON-NAME - a carboxylate siderophore // UNIQUE-ID - Hydroxamate-siderophores TYPES - Hydroxamates TYPES - Siderophore COMMON-NAME - a hydroxamate siderophore // UNIQUE-ID - Phytosiderophores TYPES - Siderophore TYPES - Hydroxamates COMMON-NAME - a phytosiderophore SYNONYMS - mugineic acid // UNIQUE-ID - Elemental-Sulfur TYPES - Inorganic-Minerals COMMON-NAME - S0 COMMENT - Elemental sulfur appears in a number of different allotropic modifications: rhombic, monoclinic, polymeric, /and others. The rhombic structure is the most common. /Both the rhombic and monoclinic forms of sulfur are made up of eight sulfur atoms arranged in a /puckered-ring structure. At one atmosphere pressure and temperatures less than 95.4°C, rhombic is the /stable crystalline form. Above 95.4 °C to the melt temperature of 118.9 °C, the monoclinic crystalline /structure is dominant |CITS: [Steudel00]|. / /In addition, elemental sulfur always contains some polymeric sulfur consisting of chain-like /macromolecules. The S-S bond energy is lower in polymeric sulfur than in ring sulfur |CITS: [17379736]|. SYNONYMS - elemental sulfur SYNONYMS - orthorhombic sulfur SYNONYMS - rhombic sulfur // UNIQUE-ID - Intracellular-Sulfur TYPES - Inorganic-Minerals COMMON-NAME - intracellular S0 // UNIQUE-ID - Salts TYPES - Inorganic-Minerals COMMON-NAME - a salt // UNIQUE-ID - Anions TYPES - Ions COMMON-NAME - an anion // UNIQUE-ID - Cations TYPES - Ions COMMON-NAME - a cation // UNIQUE-ID - Metal-Ions TYPES - Ions COMMON-NAME - a metal ion // UNIQUE-ID - a-lipid-moiety TYPES - Lipids COMMON-NAME - a lipid moiety // UNIQUE-ID - Bacterial-Endotoxins TYPES - Lipids COMMON-NAME - a bacterial endotoxin COMMENT - This compound class stands for generic and unspecified bacterial endotoxins. These are components from the outer membrane and cell wall of bacteria, which are toxic to humans and can cause sepsis. The Gram negative bacteria produce lipopolysaccharide, whereas the Gram positive bacteria produce the less active lipoteichoic acids and muramyl peptides. SYNONYMS - a bacterial endotoxin SYNONYMS - bacterial endotoxin // UNIQUE-ID - Fatty-Acid-Anions TYPES - Lipids COMMON-NAME - a fatty acid anion // UNIQUE-ID - FATTY-ACYLS TYPES - Lipids COMMON-NAME - a fatty acyl // UNIQUE-ID - Phospholipids TYPES - Lipids COMMON-NAME - a phospholipid COMMENT - Phospholipids are a class of phosphorous-containing lipids that are /composed mainly of fatty acids (depicted as R groups in the diagram), a phosphate group, and a /backbone made of a simple organic molecule. / /Almost all of the phospholipids have a glycerol backbone. Such a phospholipid is known as /|FRAME:Phosphoglycerides|. /Some types of phospholipids, for example, |FRAME: Sphingomyelins|, have a backbone made of the /amino-alcohol sphingosine. / /Phospholipids are a major component of all biological membranes. / // UNIQUE-ID - Polyisoprenoids TYPES - Lipids COMMON-NAME - a polyprenol COMMENT - The nomenclature of polyprenols and polyprenyl phosphates is somewhat confusing. Here are some guidelines for understanding these names: / /Polyprenols are composed of repeating isoprene units. The units can be attached in either a trans conformation (the two carbons are on opposite sides of the double bond) or a cis conformation (the two carbons are on the same side of the double bond). It is common to use E and Z instead of trans and cis , respectively. / /The numbering of carbons in the molecule starts from the carbon attached to the hydroxyl or phosphate group. The isoprene unit furthest from the C1 carbon is called the ω unit. Unlike all other isoprene units, the ω unit is not a stereo center since the last carbon is attached to two identical methyl groups. / /There are two widely used naming systems, and unfortunately they refer to the isoprene units in opposite order. /According to one method, the molecule is described by the stereoconfiguration of the molecule starting with the ω unit. For example |FRAME:CPD-11977| is referred to as ω,E,Z,Z tetraprenyl diphosphate. /The other method describes the molecule starting with the unit with the lowest carbon number (ie the one furthest from the ω unit), naming each of the stereo-active carbons by its number, followed by its stereo designation. According to this method the same molecule is referred to as 2,6-cis,10-trans-tetraprenyl diphosphate or (2Z,6Z,10E)-tetraprenyl diphosphate. / /On top of this, many of the shorter molecules have trivial names that are commonly used. Some of these names are specific for a particular stereoisomer and some are used for all stereoisomer. /For example, |FRAME: GERANYLGERANYL-PP "geranylgeranyl diphosphate"| is commonly used for the all-trans isomer of the molecule with four isoprene units, while farnesyl diphosphate is used for all four isomers of the molecule with three isoprene units - |FRAME:FARNESYL-PP|, |FRAME:CPD-9444|, |FRAME:CPD-11293| and |FRAME:CPD-11990|. SYNONYMS - a polyisoprenoid // UNIQUE-ID - Sphingosines TYPES - Lipids COMMON-NAME - a sphingolipid COMMENT - Sphingolipids are a class of lipids derived from the aliphatic amino alcohol sphingosine. /The sphingosine backbone is O-linked to a charged head group such as ethanolamine, serine, or choline. /The backbone is also amide-linked to an acyl group, such as a fatty acid. / /There are three main types of sphingolipids: ceramides, sphingomyelins, and glycosphingolipids. / SYNONYMS - a sphingosine // UNIQUE-ID - Chlorins TYPES - Macrocycles COMMON-NAME - a chlorin COMMENT - A chlorin is a large heterocyclic aromatic ring consisting of 3 pyrroles and one reduced pyrrole, /coupled through 4 methine linkages. /Unlike |FRAME: Porphyrins|, a chlorin is largely aromatic, but not aromatic through the entire /circumference of the ring. / /Chlorophylls are Mg-containing chlorin derivatives. // UNIQUE-ID - Corphins TYPES - Macrocycles COMMON-NAME - a corphin // UNIQUE-ID - Corrins TYPES - Macrocycles COMMON-NAME - a corrin COMMENT - Corrinoids are compounds containing corrin, which is a macrocycle related to the porphyrin ring. /The 4 pyrrole subunits in a corrin are joined on opposite sides by a C-CH3 methylene link and on one side /by a C-H methylene link, and two of the pyrroles are joined directly. /Compared to a porphyrin, the corrin is missing a bridging methylene group between a pair of pyrroles. /Corrinoids usually complex a cobalt atom, as seen in cobalamin. SYNONYMS - corrinoid // UNIQUE-ID - Porphyrins TYPES - Macrocycles COMMON-NAME - a porphyrin COMMENT - A porphyrin is a heterocyclic macrocycle derived from porphine, a molecule that consists of four pyrrole /rings joined together by four methine (=CH-) groups to form a larger macrocycle ring. /Substituted porphines are called porphyrins. Many porphyrins occur in nature, and fulfil important /biochemical roles. /Porphyrins can bind metals to form complexes. The metal ion, usually with a charge of 2+ or 3+, /resides in the central cavity formed by the loss of two protons. Many metals are found with different /derivatives, including Fe, Mg, Ni, Co and Zn. /The name porphyrin comes from a Greek word for purple, since most porphyrins are red to purple /in color. More reduced porphyrins, such as corphins, are yellowish. / / // UNIQUE-ID - Precorrins TYPES - Macrocycles COMMON-NAME - a precorrin // UNIQUE-ID - Chelators TYPES - Non-Metabolic-Compounds COMMON-NAME - a chelator COMMENT - A chelate is a chemical compound composed of a metal ion and a chelating agent. /A chelating agent is a substance whose molecules can form several bonds to a single metal ion. /An example of a simple chelating agent is ethylenediamine. // UNIQUE-ID - DIPEPTIDES TYPES - OLIGOPEPTIDES COMMON-NAME - a dipeptide // UNIQUE-ID - TRIPEPTIDES TYPES - OLIGOPEPTIDES COMMON-NAME - a tripeptide // UNIQUE-ID - RHg TYPES - Organometallics COMMON-NAME - an alkylmercury SYNONYMS - RHg+ // UNIQUE-ID - Imidazolidines TYPES - Organonitrogen-Heterocyclic-Compounds COMMON-NAME - an imidazolidine // UNIQUE-ID - Pyridines TYPES - Organonitrogen-Heterocyclic-Compounds COMMON-NAME - a pyridine // UNIQUE-ID - Alkylphosphonates TYPES - Organophosphorus-Compounds COMMON-NAME - an alkylphosphate COMMENT - This compound class stands for generic and unspecified alkylphosphonate compounds. SYNONYMS - an alkylphosphonate SYNONYMS - alkylphosphonate SYNONYMS - alkanephosphonate // UNIQUE-ID - Phosphinates TYPES - Organophosphorus-Compounds COMMON-NAME - a phosphinate // UNIQUE-ID - All-Glutathiones TYPES - ORGANOSULFUR COMMON-NAME - all glutathiones // UNIQUE-ID - Aryl-sulfates TYPES - ORGANOSULFUR COMMON-NAME - an aryl sulfate // UNIQUE-ID - CPD-11803 TYPES - ORGANOSULFUR COMMON-NAME - (RS)-phospho-3-sulfolactate SYNONYMS - (2RS)-O-phospho-3-sulfolactate SYNONYMS - (2RS)-2-O-phosphonato-3-sulfonatolactate SYNONYMS - (RS)-phosphosulfolactate // UNIQUE-ID - Diaryl-Sulfone-Derivatives TYPES - ORGANOSULFUR COMMON-NAME - a diaryl sulfone derivative // UNIQUE-ID - Phenothiazines TYPES - ORGANOSULFUR COMMON-NAME - a phenothiazine // UNIQUE-ID - SH-Compounds TYPES - ORGANOSULFUR COMMON-NAME - a -SH Compound // UNIQUE-ID - Sulfamates TYPES - ORGANOSULFUR COMMON-NAME - a sulfamate // UNIQUE-ID - Sulfhydryl-Groups TYPES - ORGANOSULFUR COMMON-NAME - a sulfhydryl group SYNONYMS - mercapto group SYNONYMS - thiol group // UNIQUE-ID - Sulfhydryl-Reagents TYPES - ORGANOSULFUR COMMON-NAME - a sulfhydryl reagent // UNIQUE-ID - Sulfhydryls TYPES - ORGANOSULFUR COMMON-NAME - R'C(R)SH SYNONYMS - a sulfhydryls // UNIQUE-ID - Sulfonamides TYPES - ORGANOSULFUR COMMON-NAME - a sulfonamide // UNIQUE-ID - SULFONATES TYPES - ORGANOSULFUR COMMON-NAME - an organosulfonate SYNONYMS - a sulfonate // UNIQUE-ID - Sulfones TYPES - ORGANOSULFUR COMMON-NAME - a sulfone COMMENT - Sulfones are a class of organosulfur compounds occurring widely in nature. /They contain two carbon-sulfur bonds, with a hexavalent sulfur atom that is also linked to two oxygen /atoms. All sulfones have the general structure: R2–SO2, where R2 represents linkage to two carbon /atoms either within one (e.g. the heterocyclic ring in |FRAME: CPD-944|) or two /(e.g. the two methyl groups of |FRAME: CPD-10437|) substituents. // UNIQUE-ID - Thiazoles TYPES - ORGANOSULFUR COMMON-NAME - a thiazole // UNIQUE-ID - Thiols TYPES - ORGANOSULFUR COMMON-NAME - a thiol // UNIQUE-ID - AMP-DNA TYPES - DNA-N COMMON-NAME - 5'-AMP-DNA // UNIQUE-ID - AP-Site-Created TYPES - DNA-N COMMON-NAME - an AP(apurinic or apyrimidinic) site created by glycosylic bond cleavage // UNIQUE-ID - Damaged-DNA TYPES - DNA-N COMMON-NAME - a damaged DNA (purine or pyrimidine) // UNIQUE-ID - Depurinated-DNA TYPES - DNA-N COMMON-NAME - depurinated DNA // UNIQUE-ID - DNA-46-Diamino-5-Formamidopyrimidine TYPES - DNA-N COMMON-NAME - DNA-4,6-diamino-5-formamidopyrimidine // UNIQUE-ID - DNA-5-Methyl-Cytosines TYPES - DNA-N COMMENT - This compound class stands for generic and unspecified DNA 5-methylcytosines. SYNONYMS - a DNA 5-methylcytosine SYNONYMS - DNA 5-methylcytosine // UNIQUE-ID - DNA-6-Methyl-Amino-Purines TYPES - DNA-N COMMENT - This compound class stands for generic and unspecified DNA 6-methylaminopurines. SYNONYMS - a DNA 6-methylaminopurine SYNONYMS - DNA 6-methylaminopurine // UNIQUE-ID - DNA-6-O-Methyl-Guanines TYPES - DNA-N COMMON-NAME - a DNA containing 6-O-methylguanine COMMENT - This compound class stands for generic and unspecified DNA 6-O-methylguanines. SYNONYMS - a DNA 6-O-methylguanine SYNONYMS - DNA 6-O-methylguanine SYNONYMS - DNA (CONTAINING 6-O-METHYLGUANINE) // UNIQUE-ID - DNA-Adenines TYPES - DNA-N COMMENT - This compound class stands for generic and unspecified DNA adenines. SYNONYMS - a DNA adenine SYNONYMS - DNA adenine // UNIQUE-ID - DNA-Adjacent-Pyrimidines TYPES - DNA-N COMMENT - This compound class stands for generic and unspecified DNA pair of adjacent pyrimidiness. SYNONYMS - 2 pyrimidine residues (in DNA) SYNONYMS - a DNA pair of adjacent pyrimidines SYNONYMS - DNA pair of adjacent pyrimidines SYNONYMS - PYRIMIDINE RESIDUES (IN DNA) // UNIQUE-ID - DNA-containing-abasic-Sites TYPES - DNA-N COMMON-NAME - a DNA containing abasic site // UNIQUE-ID - DNA-Cyclobuta-Dipyrimidines TYPES - DNA-N COMMON-NAME - a DNA cyclobutadipyrimidine COMMENT - This compound class stands for generic and unspecified DNA cyclobutadipyrimidines. SYNONYMS - DNA cyclobutadipyrimidine SYNONYMS - cyclobutadipyrimidine (in DNA) // UNIQUE-ID - DNA-Cytosines TYPES - DNA-N COMMENT - This compound class stands for generic and unspecified DNA cytosines. SYNONYMS - a DNA cytosine SYNONYMS - DNA cytosine // UNIQUE-ID - DNA-Guanines TYPES - DNA-N COMMON-NAME - DNA (without 6-O-methylguanine) COMMENT - This compound class stands for generic and unspecified DNA guanines. SYNONYMS - a DNA guanine SYNONYMS - DNA guanine // UNIQUE-ID - DNA-with-Uracils TYPES - DNA-N COMMON-NAME - a DNA with uracil // UNIQUE-ID - 5-Methylcytosine-DNA TYPES - Methylated-DNA COMMON-NAME - DNA containing 5-methylcytosine // UNIQUE-ID - Drugs TYPES - Pseudo-Compounds COMMON-NAME - a drug COMMENT - This compound class stands for generic and unspecified drugs in transport reactions. Once a given transporter is better characterized, a more specific compound class should be substituted instead. // UNIQUE-ID - Ferric-Hydroxamate-Complexes TYPES - Pseudo-Compounds COMMENT - This pseudo compound class stands for generic and unspecified complexes between a ferric iron ion and a hydroxamate compound. As of June 2003, there is no other real way to represent such small molecule complexes. SYNONYMS - a ferric hydroxamate complex SYNONYMS - ferric hydroxamate complex SYNONYMS - iron (III) hydroxamate complex SYNONYMS - iron (III) hydroxamate // UNIQUE-ID - Hydrophilic-Solute-Or-Ion-LT-600Da TYPES - Pseudo-Compounds COMMON-NAME - hydrophilic solute or ion < 600 Da COMMENT - This compound class stands for generic and unspecified ions or hydrophilic solutes in transport reactions. They have a molecular mass of smaller than 600Da. Once a given transporter is better characterized, a more specific compound class should be substituted instead. // UNIQUE-ID - Mono-Di-And-Tri-Saccharides-LT-600Da TYPES - Pseudo-Compounds COMMON-NAME - mono-, di-, or trisaccharide < 600 Da COMMENT - This compound class stands for generic and unspecified mono-, di-, or trisaccharides in transport reactions. They have a molecular mass of smaller than 600Da. Once a given transporter is better characterized, a more specific compound class should be substituted instead. // UNIQUE-ID - Multidrug TYPES - Pseudo-Compounds COMMON-NAME - multidrug COMMENT - This compound class stands for generic and unspecified drugs in transport reactions. Once a given transporter is better characterized, a more specific compound class should be substituted instead. // UNIQUE-ID - NCCS TYPES - Pseudo-Compounds COMMON-NAME - a nonfluorescent chlorophyll catabolite SYNONYMS - NCCs // UNIQUE-ID - UNKNOWN TYPES - Pseudo-Compounds COMMON-NAME - unknown COMMENT - This entry is used in chemical reactions in which the identity of one or more reactants is not known. // UNIQUE-ID - Unknown-Inducers TYPES - Pseudo-Compounds COMMENT - This compound class stands for generic and unspecified inducers. SYNONYMS - an unknown inducer SYNONYMS - unknown inducer // UNIQUE-ID - Unspecified-Degradation-Products TYPES - Pseudo-Compounds COMMON-NAME - [unspecified degradation products] // UNIQUE-ID - Unspecified-Ion-Or-Solute TYPES - Pseudo-Compounds COMMON-NAME - non-specific ion/solute COMMENT - This compound class stands for generic and unspecified ions or solutes in transport reactions. Once a given transporter is better characterized, a more specific compound class should be substituted instead. // UNIQUE-ID - Membrane-Electron-Carriers TYPES - Redox-Electron-Carriers COMMENT - Membrane-bound electron carriers are quinone or quinol type compounds /involved in electron transfer processes. They will usually have their /full-length, lipophilic isoprenoid tails attached, which is how they /remain membrane-bound. Generally, they will freely diffuse within the /membrane, thus allowing their load of 2 electrons and 2 protons to be /transported between proteins, in a process that has been termed Q-loop. // UNIQUE-ID - NAD-P-OR-NOP TYPES - Redox-Electron-Carriers COMMON-NAME - NAD(P)+ COMMENT - NAD(P)+ is a class of compounds including the instances NAD+ and NADP+. COMMENT - NAD(P)(+) is a class of compounds including the instances NAD and NADP. SYNONYMS - NAD(P) SYNONYMS - NAD(P)+ // UNIQUE-ID - NADH-P-OR-NOP TYPES - Redox-Electron-Carriers COMMON-NAME - NAD(P)H COMMENT - NAD(P)H is a class of compounds including the instances NADH and NADPH. // UNIQUE-ID - Vitamin-E TYPES - Quinones TYPES - Vitamins COMMON-NAME - vitamin E COMMENT - The term |FRAME: Vitamin-E| refers to a collection of tocopherols including /|FRAME: ALPHA-TOCOPHEROL|, |FRAME: BETA-TOCOPHEROL|, |FRAME: GAMA-TOCOPHEROL| /and |FRAME:DELTA-TOCOPHEROL|, which differ only in the number and position of methyl groups on /the chromanol ring. / /Tocopherols are essential dietary components for animals (including humans) and act primarily as /antioxidants. Their presumed role in plants involve protection of chloroplast lipids and chlorophylls /against oxidative damages. SYNONYMS - tocopherol // UNIQUE-ID - ALKALOID TYPES - Secondary-Metabolites COMMON-NAME - an alkaloid // UNIQUE-ID - Flavonoids TYPES - Secondary-Metabolites COMMON-NAME - a flavonoid // UNIQUE-ID - Glucosinolates TYPES - Secondary-Metabolites COMMON-NAME - a glucosinolate COMMENT - |FRAME: Glucosinolates "Glucosinolates"| are substituted β-thioglucoside N-hydroxysulfates, formed by certain planst from any one of eight amino acids, namely, alanine, valine, leucine, isoleucine, phenylalanine, methionine, tyrosine and tryptophan. Over 115 naturally occurring glucosinolates have been identified. Much of /the diversity amongst glucosinolates arises from the addition of different sized alkyl groups to the side chain of the amino acids, principally valine, phenylalanine and methionine |CITS: [18458837]|. / /Glucosinolates are found prominently in the order |FRAME: TAX-3700|, which includes cabbage, mustard, oilseed rape, broccoli, and the model plant Arabidopsis, and are responsible for the typical sharp taste and odor of these plants. // UNIQUE-ID - Indole-Phytoalexins TYPES - Secondary-Metabolites COMMON-NAME - an indole-phytolexin // UNIQUE-ID - Insecticides TYPES - Secondary-Metabolites COMMON-NAME - an insecticide // UNIQUE-ID - Phenylpropanoids TYPES - Secondary-Metabolites COMMON-NAME - a phenylpropanoid // UNIQUE-ID - Poly-Hydroxybutyrate TYPES - Secondary-Metabolites COMMON-NAME - a poly-β-hydroxybutyrate SYNONYMS - 2-methyl-3-ketobutyrate SYNONYMS - poly-hydroxybutyrate // UNIQUE-ID - POLYKETIDE TYPES - Secondary-Metabolites COMMON-NAME - a polyketide // UNIQUE-ID - Siderophore TYPES - Secondary-Metabolites COMMON-NAME - a siderophore COMMENT - Siderophores are small, high-affinity iron chelating compounds secreted by microorganisms. Once outside the cell, siderophores bind |FRAME: FE+3| with high affinity, and the iron-siderophore complexes are imported back into the cell by active-transport mechanisms. / /Siderophores are very vcommon in pathogenic bacteria, since iron in the host organism is usually tightly bound to proteins, resulting in an extremely low concentration of free iron in the blood. / /Most siderophores belong to one of three major groups: the |FRAME: Catecholate-siderophores "catechols"|, |FRAME: Hydroxamate-siderophores "hydroxamates"| and |FRAME: Thiazoline-siderophores "thiazolines"|. / /Some grasses are known to make siderophores as well. These |FRAME: Phytosiderophores "phytosiderophores"| are also known as mugineic acids. // UNIQUE-ID - Terpenoids TYPES - Secondary-Metabolites COMMON-NAME - a terpenoid SYNONYMS - terpenes SYNONYMS - a terpene // UNIQUE-ID - Terpenophenolics TYPES - Secondary-Metabolites COMMON-NAME - a terpenophenolic // UNIQUE-ID - Xenobiotic TYPES - Secondary-Metabolites COMMON-NAME - a xenobiotic // UNIQUE-ID - Bile-acids TYPES - Steroids COMMON-NAME - a bile acid COMMENT - Bile acids are steroid acids found predominantly in the bile of mammals. /They are produced in the liver by the oxidation of cholesterol, are stored in gall bladder, /and secreted into the intestine in the form of salts, where they assist with the absorption and digestion /of lipids. /About half of the cholesterol produced in the body is used for bile acid synthesis. / // UNIQUE-ID - Hydroxysteroids TYPES - Steroids COMMON-NAME - a hydroxysteroid // UNIQUE-ID - Oxosteroids TYPES - Steroids COMMON-NAME - a ketosteroid SYNONYMS - an oxosteroid // UNIQUE-ID - Steroid-Esters TYPES - Steroids COMMON-NAME - a steroid ester // UNIQUE-ID - Sterols TYPES - Steroids COMMON-NAME - a sterol COMMENT - Sterols are steroids carrying a hydroxyl group at C-3 and most of the skeleton of cholestane. Additional carbon atoms may be present in the side chain. // UNIQUE-ID - Alkenyl-Thiohydroximate-O-Sulfates TYPES - THIOHYDROXIMATE-O-SULFATES COMMON-NAME - a thiohydroximate-O-sulfate with a terminal alkene SYNONYMS - an alkenyl-thiohydroximate-O-sulfate // UNIQUE-ID - No-Alkenyl-Thiohydroximate-O-Sulfates TYPES - THIOHYDROXIMATE-O-SULFATES COMMON-NAME - a thiohydroximate-O-sulfate without a terminal alkene // UNIQUE-ID - CPD-11501 TYPES - Vitamins COMMON-NAME - a vitamin K COMMENT - Vitamin K is a name given to a group of derivatives of 2-methyl-1,4-naphthoquinone that are required by mammals for the posttranslational modification of certain proteins, mostly involved in blood coagulation. /These compounds, while essential for mammals, are not synthesized by them, and are thus considered vitamins. / /The natural forms of the vitamin are vitamin K1 (|FRAME: 2-METHYL-3-PHYTYL-14-NAPHTHOQUINONE|) and vitamin K2 (|FRAME: Menaquinones|). Since menaquinones produced by different organisms have different tail lenghts, there are many variations of vitamin K2, usually specified based on the number of carbons in their tails, such as in Vitamin K2(45). /Menaquinones are synthesized by gut bacteria, and are absorbed into the blood. Thus, dietary deficiency is extremely rare in healthy individuals. / /There are also several synthetic forms- vitamin K3 through K9. Vitamin K3 (|FRAME: CPD-3766|) is the most active of the synthetic forms. / // UNIQUE-ID - DL-CARNITINE TYPES - Vitamins COMMON-NAME - a D,L-carnitine // UNIQUE-ID - Vitamins-B12 TYPES - Vitamins COMMON-NAME - a vitamin B12 COMMENT - This compound class stands for the different redox forms of Vitamin B12. // UNIQUE-ID - Vitamins-B6 TYPES - Vitamins COMMON-NAME - a vitamin B6 // UNIQUE-ID - SOME-CHARGED-TRNAS TYPES - Charged-tRNAs TYPES - Some-tRNA COMMON-NAME - some charged tRNAs // UNIQUE-ID - 3-Methyl-2-Oxobut-Dehydrogenases TYPES - Protein-Complexes COMMON-NAME - a 3-methyl-2-oxobutanoate dehydrogenase // UNIQUE-ID - a-proteasome TYPES - Protein-Complexes COMMON-NAME - a proteasome COMMENT - Proteasomes are very large protein complexes inside all eukaryotes and archaea, as well as in some bacteria. In eukaryotes, they are located in the nucleus and the cytoplasm. The main function of the proteasome is to degrade unneeded or damaged proteins by proteolysis, a chemical reaction that breaks peptide bonds. Enzymes that carry out such reactions are called proteases. Proteasomes are part of a major mechanism by which cells regulate the concentration of particular proteins and degrade misfolded proteins. The degradation process yields peptides of about seven to eight amino acids long, which can then be further degraded into amino acids and used in synthesizing new proteins. Proteins are tagged for degradation with a considerably small protein called ubiquitin. The tagging reaction is catalyzed by enzymes called ubiquitin ligases. Once a protein is tagged with a single ubiquitin molecule, this is a signal to other ligases to attach additional ubiquitin molecules. The result is a polyubiquitin chain that is bound by the proteasome, allowing it to degrade the tagged protein. // UNIQUE-ID - APO-CITRATE-LYASE TYPES - Protein-Complexes COMMON-NAME - a citrate lyase apo-[acyl-carrier protein] // UNIQUE-ID - apo-malonate-decarboxylases TYPES - Protein-Complexes COMMON-NAME - a malonate decarboxylase apo-[acyl-carrier protein] // UNIQUE-ID - apo-Transcarboxylases TYPES - Protein-Complexes COMMON-NAME - a apo-[methylmalonyl-CoA:pyruvate carboxytransferase] SYNONYMS - apo-[methylmalonyl-CoA-carboxyltransferase] // UNIQUE-ID - BCCP-dimers TYPES - Protein-Complexes COMMON-NAME - a biotinylated BCCP (dimer) SYNONYMS - BCCP dimer SYNONYMS - biotin carboxy carrier protein (dimer) // UNIQUE-ID - Branched-chain-2-keto-acid-deHase TYPES - Protein-Complexes COMMON-NAME - a branched-chain 2-keto acid dehydrogenase SYNONYMS - [3-methyl-2-oxobutanoate dehydrogenase (acetyl-transferring)] // UNIQUE-ID - Cit-Ly TYPES - Protein-Complexes COMMON-NAME - a citrate lyase // UNIQUE-ID - Citramalate-lyases TYPES - Protein-Complexes TYPES - Modified-Proteins COMMON-NAME - citramalate lyase, active // UNIQUE-ID - CITRATE-LYASE TYPES - Protein-Complexes TYPES - Modified-Proteins COMMON-NAME - a [citrate (pro-3S)-lyase](acetyl form) COMMENT - Citrate lyase, an anaerobic enzyme, catalyzes the cleavage of citrate to acetate and oxaloacetate /|CITS: [6354265]|. The citrate molecule is very stable, and needs to be activated prior to cleavage by /forming a thioester bond with the enzyme. / /The enzyme is a complex of three subunits (in a 6:6:6 configuration), one of them a dedicated acyl carrier protein (acp). /It is synthesized in an apo form, and is converted to its holo form by the covalent binding of the unusual /prosthetic group |FRAME: 2-5-PHOSPHORIBOSYL-3-DEPHOSPHO-COA| to the [acp] component, /resulting in |FRAME: DEACETYL-CITRATE-LYASE|. However, this holo form is still not fully active - in /order to be active, the prosthetic group needs to be acetylated, a reaction catalyzed by the /|FRAME: G6344|-encoded |FRAME: CITC-MONOMER|, which generates |FRAME: CITRATE-LYASE|. SYNONYMS - [citrate-oxaloacetate-lyase((pro-3S)-CH2COO-acetate)] SYNONYMS - citrate-oxaloacetate-lyase // UNIQUE-ID - Co-E-Clth TYPES - Protein-Complexes COMMON-NAME - a corrinoid Fe-S protein COMMENT - The cobalt- and iron-containing corrinoid iron-sulfur protein (CoFeSP) is functional in the /|FRAME:CODH-PWY| of autotrophic carbon fixation in various bacteria and archaea, /where it is essential for the biosynthesis of acetyl-CoA. /CoFeSP acts in two methylation reactions: the transfer of a methyl group from methyltransferase-bound /methyltetrahydrofolate to the cob(I)amide of CoFeSP, and the transfer of the methyl group of /methyl-cob(III)amide to the reduced Ni-Ni-[4Fe-4S] active site cluster of acetyl-CoA synthase /|CITS: [16983091]|. / // UNIQUE-ID - Cysteine-Desulfurylases TYPES - Protein-Complexes COMMON-NAME - a cysteine desulfurylase // UNIQUE-ID - Etf TYPES - Protein-Complexes COMMON-NAME - an electron-transferring flavoprotein // UNIQUE-ID - Factor-XI TYPES - Protein-Complexes COMMON-NAME - a factor XI COMMENT - |FRAME: Factor-XI "Factor XI"|, or plasma thromboplastin antecedent, is the zymogen form of |FRAME: Factor-XIa "factor XIa"|, one of the enzymes of the coagulation cascade |FRAME: 3.4.21.27-RXN "EC 3.4.21.27"|. Like many other coagulation factors, it is a serine protease. / /Factor XI is produced by the liver and circulates as a homo-dimer in its inactive form. It is activated into |FRAME: Factor-XIa "factor XIa"| by |FRAME: Thrombins "thrombin"| (also known as factor XIIa), and it is also autocatalytic in that respect. / /|FRAME: Factor-XI "Factor XI"| activates |FRAME: Factor-IX "factor IX"| by selectively cleaving arg-ala and arg-val peptide bonds. Factor IXa, in turn, activates |FRAME: Factor-X "factor X"|. SYNONYMS - plasma thromboplastin antecedent // UNIQUE-ID - Factor-XIa TYPES - Protein-Complexes TYPES - Modified-Proteins COMMON-NAME - a factor XIa COMMENT - |FRAME: Factor-XI "Factor XI"|, or plasma thromboplastin antecedent, is the zymogen form of |FRAME: Factor-XIa "factor XIa"|, one of the enzymes of the coagulation cascade. Like many other coagulation factors, it is a serine protease. SYNONYMS - activated factor XI // UNIQUE-ID - Flavorubredoxin TYPES - Protein-Complexes // UNIQUE-ID - GLYCOGENIN TYPES - Protein-Complexes COMMON-NAME - a glycogenin // UNIQUE-ID - Hemoglobins TYPES - Protein-Complexes COMMON-NAME - a hemoglobin COMMENT - Hemoglobin is a protein complex found in the red blood cells of all vertebtrates that is involved in oxygen transport from the lung or gills to the various peripheral tissues. It is also found the tissues of some invertebrates. /Mammalian hemoglobins are heterotetramers with an α2β2 composition, and each subunit contains a tightly bound heme molecule. The subunit identity changes with different developmental stages and among different forms of the protein. / /In the human fetus, the protein (known as HbF) is composed of of two α subunits and two γ subunits. / /In early embryonic stage the protein (known as hemoglobin Gower-2) is composed of of two α subunits and two ε subunits. / /In adult hemoglobin A (HbA) the protein is composed of of two α subunits and two β subunits. / /In adult hemoglobin A2 (HbA2) the protein is composed of of two α subunits and two δ subunits. // UNIQUE-ID - Holo-ACP-Synthases TYPES - Protein-Complexes COMMON-NAME - a holo-[acyl-carrier-protein] synthase COMMENT - The holo-ACP synthase enzyme transfers the 4-phosphopantetheine moeity of CoA to the apo-ACP protein to form the active form, holo-ACP |CITS: [4872726][7016860]|. // UNIQUE-ID - HOLO-CITRATE-LYASE TYPES - Protein-Complexes TYPES - Modified-Proteins COMMON-NAME - a citrate lyase holo-[acyl-carrier protein] COMMENT - Citrate lyase, an anaerobic enzyme, catalyzes the cleavage of citrate to acetate and oxaloacetate /|CITS: [6354265]|. The citrate molecule is very stable, and needs to be activated prior to cleavage by /forming a thioester bond with the enzyme. / /The enzyme is a complex of three subunits (in a 6:6:6 configuration), one of them a dedicated acyl carrier protein (acp). /It is synthesized in an apo form, and is converted to its holo form by the covalent binding of the unusual /prosthetic group |FRAME: 2-5-PHOSPHORIBOSYL-3-DEPHOSPHO-COA| to the [acp] component, /resulting in |FRAME: DEACETYL-CITRATE-LYASE|. However, this holo form is still not fully active - in /order to be active, the prosthetic group needs to be acetylated, a reaction catalyzed by the /|FRAME: G6344|-encoded |FRAME: CITC-MONOMER|, which generates |FRAME: CITRATE-LYASE|. // UNIQUE-ID - Holo-malonate-decarboxylases TYPES - Protein-Complexes COMMON-NAME - a malonate decarboxylase holo-[acyl-carrier-protein] // UNIQUE-ID - holo-Transcarboxylases TYPES - Protein-Complexes COMMON-NAME - [methylmalonyl-CoA:pyruvate carboxytransferase] SYNONYMS - holo-[methylmalonyl-CoA:pyruvate carboxytransferase] SYNONYMS - biotin-[methylmalonyl-CoA:pyruvate carboxytransferase] SYNONYMS - holo-[methylmalonyl-CoA-carboxyltransferase] SYNONYMS - biotin-[methylmalonyl-CoA-carboxyltransferase] // UNIQUE-ID - Inactive-citramalate-lyases TYPES - Protein-Complexes COMMON-NAME - citramalate lyase, inactive // UNIQUE-ID - Nitrate-Reductases TYPES - Protein-Complexes COMMON-NAME - a nitrate reductase // UNIQUE-ID - Nitrogenases TYPES - Protein-Complexes COMMON-NAME - a nitrogenase complex // UNIQUE-ID - Phosphorylase-a TYPES - Protein-Complexes COMMON-NAME - a phosphorylase a // UNIQUE-ID - Phosphorylase-b TYPES - Protein-Complexes COMMON-NAME - a phosphorylase b // UNIQUE-ID - Plasmins TYPES - Protein-Complexes COMMON-NAME - a plasmin // UNIQUE-ID - Pyruvate-dehydrogenases TYPES - Protein-Complexes COMMON-NAME - a pyruvate dehydrogenase SYNONYMS - [pyruvate dehydrogenase (acetyl-transferring)] // UNIQUE-ID - Reduced-e-transfer-flavoproteins TYPES - Protein-Complexes TYPES - Modified-Proteins COMMON-NAME - a reduced electron-transferring flavoprotein // UNIQUE-ID - Ribonucleoside-triphosphate-reductases TYPES - Protein-Complexes COMMON-NAME - a ribonucleoside triphosphate reductase // UNIQUE-ID - RNA-Polymerases TYPES - Protein-Complexes COMMON-NAME - an RNA polymerase // UNIQUE-ID - RUBISCO TYPES - Protein-Complexes COMMON-NAME - a Ribulose Bisphosphate Carboxylase/Oxygenase // UNIQUE-ID - Xanthine-dehydrogenases TYPES - Protein-Complexes COMMON-NAME - a xanthine dehydrogenase // UNIQUE-ID - Xanthine-oxidases TYPES - Protein-Complexes COMMON-NAME - a xanthine oxidase // UNIQUE-ID - ETF-OXIDIZED TYPES - Etf TYPES - Modified-Proteins COMMON-NAME - an oxidized electron transferring flavoprotein COMMENT - Electron-transferring flavoproteins (ETF) are classified into two groups. / /One group includes ETFs from mammals, the methylotrophic bacterium |FRAME: TAX-2327|, and the /soil bacterium |FRAME: TAX-266|. These ETFs are heterodimeric, contain one non-covalently bound /FAD and one AMP per molecule, and function as electron carriers between other flavoproteins such as /acyl-CoA dehydrogenases, |FRAME: CPLX-6421|, ETF-CoQ oxidoreductase, and |FRAME: CPLX-7462|, /depending on the source species. / /The other group includes the ETF from an anaerobic bacterium, |FRAME: TAX-907|. /This ETF is also a heterodimer but contains two FAD molecules. The presence of AMP has not been reported. /The function of |FRAME: TAX-907| ETF is to transfer electrons between flavoproteins, |FRAME: CPLX-5242| /(DLDH) and |FRAME: CPLX-7036| (BCD), and additionally to oxidize NADH |CITS: [14688238]|. SYNONYMS - electron transfer flavoprotein, oxidized SYNONYMS - ETF // UNIQUE-ID - ADP-D-ribosyl-nitrogen-reductases TYPES - Nitrogen-reductases TYPES - Modified-Proteins COMMON-NAME - ADP-D-ribosyl-(dinitrogen reductase) // UNIQUE-ID - Oxidized-nitrogen-reductases TYPES - Modified-Proteins TYPES - Nitrogen-reductases COMMON-NAME - an oxidized nitrogenase SYNONYMS - a dinitrogenase, oxidized SYNONYMS - a dinitrogen reductase, oxidized SYNONYMS - a nitrogenase, oxidized // UNIQUE-ID - Oxidized-nitrogenase-reductases TYPES - Modified-Proteins TYPES - Nitrogenase-Reductases COMMON-NAME - an oxidized nitrogenase-reductase // UNIQUE-ID - Acyl-protein-thioesters TYPES - Protein-Small-Molecule-Complexes COMMON-NAME - an acyl-protein thioester // UNIQUE-ID - ACYL-ACP TYPES - Acyl-protein-thioesters TYPES - Modified-Proteins COMMON-NAME - an acyl-[acp] SYNONYMS - acyl-[acyl carrier protein] SYNONYMS - CH3(CH2)xCO-S-ACP // UNIQUE-ID - Polyketide-ACPs TYPES - Acyl-protein-thioesters TYPES - Modified-Proteins COMMON-NAME - a polyketide-[acp] // UNIQUE-ID - Genetic-Elements TYPES - DNA COMMON-NAME - Replicons COMMENT - This class includes all replicated DNA molecules, including chromosomes and plasmids. SYNONYMS - Replicons // UNIQUE-ID - 3-Prime-Phosphate-Terminated-RNAs TYPES - RNA COMMENT - This compound class collects RNA species that are terminated by a 3'-phosphate. SYNONYMS - a 3'-phosphate-terminated RNA SYNONYMS - 3'-phosphate-terminated RNA SYNONYMS - RNA 3'-terminal-phosphate // UNIQUE-ID - All-tRNAs TYPES - RNA COMMON-NAME - tRNA COMMENT - This class encompasses both charged and uncharged tRNA molecules. // UNIQUE-ID - Cyclic-Phosphate-Terminated-RNAs TYPES - RNA COMMENT - This compound class collects RNA species that are terminated by a 2',3'-cyclic-phosphate. SYNONYMS - a 2',3'-cyclic-phosphate-terminated RNA SYNONYMS - 2',3'-cyclic-phosphate-terminated RNA SYNONYMS - RNA terminal-2',3'-cyclic-phosphate // UNIQUE-ID - Misc-RNAs TYPES - RNA COMMENT - This class includes non-messenger-RNAs that do not belong in other siblings of /this class, such as the RNase P RNA, and the telomerase RNA component. // UNIQUE-ID - mRNAs TYPES - RNA COMMON-NAME - a mRNA COMMENT - The class of all messenger RNA molecules. // UNIQUE-ID - Regulatory-RNAs TYPES - RNA COMMENT - The class of all regulatory RNA molecules, such as small trans-acting RNAs that /inhibit translation or enhance degradation of mRNAs. // UNIQUE-ID - RNA-Containing-5-Fluorouridines TYPES - RNA COMMON-NAME - a RNA containing 5-fluorouridine // UNIQUE-ID - RNA-N TYPES - RNA COMMON-NAME - RNA(n) COMMENT - This compound class stands for generic RNA polymers, that can be produced or consumed by enzymes. SYNONYMS - ribonucleic acid SYNONYMS - ribonucleate // UNIQUE-ID - rRNAs TYPES - RNA COMMON-NAME - rRNA COMMENT - The class of all ribosomal RNA molecules. // UNIQUE-ID - snRNAs TYPES - RNA COMMON-NAME - snRNA COMMENT - The class of all small nuclear RNAs, small RNA molecules that are found in the nucleus of eukaryotic cells. // UNIQUE-ID - ssRNA TYPES - RNA COMMON-NAME - a single-stranded RNA SYNONYMS - a ssRNA // UNIQUE-ID - tmRNA TYPES - RNA COMMON-NAME - tmRNA COMMENT - The bacterial tmRNA is so-named for its dual tRNA-like and mRNA-like nature. /tmRNA participates in a process mediating recovery from translation problems /that result in proteins that are stalled on the ribosome. tmRNA adds a /C-terminal peptide tag to unfinished protein, which targets the it for proteolysis // UNIQUE-ID - Oxidized-hemoproteins TYPES - Hemoproteins COMMON-NAME - an oxidized hemoprotein // UNIQUE-ID - Reduced-hemoproteins TYPES - Hemoproteins COMMON-NAME - a reduced hemoprotein // UNIQUE-ID - Phospho-Microsomal-membrane-proteins TYPES - Microsomal-membrane-proteins COMMON-NAME - a phosphorylated microsomal-membrane-protein SYNONYMS - phospho-[microsomal-membrane-protein] // UNIQUE-ID - 34-DHB-AsbD-Proteins TYPES - Modified-Proteins COMMON-NAME - a 3,4-DHB-AsbD protein COMMENT - AsbD is an aryl-carrier protein that activates |FRAME: 3-4-DIHYDROXYBENZOATE| prior to its incorporation into |FRAME: CPD-9985|. /The AsbD protein itself needs to be activated by the transfer of a |FRAME: PANTETHEINE-P| group from |FRAME: CO-A| to serine 40 of the apo form, resulting in the active holo form, in a manner similar to other acyl- and aryl-carrier proteins. / /The AsbC protein catalyzes the adenylation of |FRAME: 3-4-DIHYDROXYBENZOATE|, followed by the transfer of the adenylated intermediate to the holo-asbD protein, resulting in |FRAME: 34-DHB-AsbD-Proteins| |CITS: [17346033]|. / /Once activated, the |FRAME: 3-4-DIHYDROXYBENZOATE| moiety can be transferred by AsbE from |FRAME: 34-DHB-AsbD-Proteins| to different receipient molecules, including |FRAME: CPD-11479|, |FRAME: CPD-11480| and |FRAME: CPD-11481| |CITS: [18758617]|. // UNIQUE-ID - 5-GLUTAMYL-D-GLUTAMYL-PEPTIDE TYPES - Modified-Proteins TYPES - Peptides COMMON-NAME - a 5-glutamyl-D-glutamyl-peptide // UNIQUE-ID - 5-L-GLUTAMYL-PEPTIDE TYPES - Peptides TYPES - Modified-Proteins COMMON-NAME - a (5-L-glutamyl)-L-peptide // UNIQUE-ID - 5-OXOPROLYL-PEPTIDE TYPES - Polypeptides TYPES - Modified-Proteins COMMON-NAME - a 5-oxoprolyl-peptide SYNONYMS - pyroglutamyl-peptide // UNIQUE-ID - 6-a-D-mannosyl-b-D-mannosyl-R TYPES - Modified-Proteins COMMON-NAME - 6-(α-D-mannosyl)-β-D-mannosyl-R COMMENT - R represents the remainder of the N-linked oligosaccharide in the glycoprotein acceptor. SYNONYMS - 6-(a-D-mannosyl)-b-D-mannosyl-R // UNIQUE-ID - ACP TYPES - Fatty-Acid-Synthase-ACPs TYPES - Modified-Proteins COMMON-NAME - a holo-[acp] COMMENT - This class includes the active form of acyl carrier proteins (ACPs), universal and highly conserved /carriers of acyl intermediates during fatty acid synthesis. /In yeast and mammals, ACP exists as a separate domain within a large multifunctional fatty acid /synthase polyprotein (type I FAS), whereas in bacteria and plastids it is a small monomeric protein /(type II FAS). Bacterial ACPs can also serve as acyl donors for synthesis of a variety of products, /including endotoxin and acylated homoserine lactones involved in quorum sensing. / /ACP proteins are synthesized in their "apo" inactive form, and are activated by attachment of a /|FRAME: PANTETHEINE-P| moiety, removed from |FRAME: CO-A|, to a serine residue, in a reaction /catalyzed by 4'-phosphopantetheinyl transferase |CITS: [18059524]|. SYNONYMS - B1094 SYNONYMS - AcpP SYNONYMS - holo-[acyl-carrier protein] SYNONYMS - ACP-SH SYNONYMS - ACP // UNIQUE-ID - Activated-Protein-C TYPES - Modified-Proteins COMMON-NAME - an activated protein C SYNONYMS - APC // UNIQUE-ID - b-D-mannosyl-R TYPES - Modified-Proteins COMMON-NAME - β-D-mannosyl-R COMMENT - R represents the remainder of the N-linked oligosaccharide in the glycoprotein acceptor. SYNONYMS - b-D-mannosyl-R // UNIQUE-ID - BCCP-biotin-monomers TYPES - BCCP-monomers TYPES - Modified-Proteins COMMON-NAME - a biotinylated BCCP (monomer) // UNIQUE-ID - Biotinylated-MadF-Proteins TYPES - Modified-Proteins COMMON-NAME - a biotinylated MadF protein SYNONYMS - a biotinyl-[protein] // UNIQUE-ID - Bis-NAC-GLC-Man-Man-R TYPES - Modified-Proteins COMMON-NAME - 3-(2,4-bis[N-acetyl-β-D-glucosaminyl]-α-D-mannosyl)-β-D-mannosyl-R COMMENT - R represents the remainder of the N-linked oligosaccharide in the glycoprotein acceptor. SYNONYMS - 3-(2,4-bis[N-acetyl-b-D-glucosaminyl]-a-D-mannosyl)-b-D-mannosyl-R // UNIQUE-ID - Carboxylated-Biotinylated-MadF-Proteins TYPES - Modified-Proteins COMMON-NAME - a carboxylated biotinylated MadF protein SYNONYMS - a carboxybiotinyl-[protein] // UNIQUE-ID - Cell-division-inhibitor-SulAs TYPES - Modified-Proteins COMMON-NAME - a cell division inhibitor SulA // UNIQUE-ID - Citrate-Lyase-Citryl-Forms TYPES - Modified-Proteins COMMON-NAME - a [citrate (pro-3S)-lyase](citryl form) // UNIQUE-ID - D-GLUTAMYL-PEPTIDE TYPES - Modified-Proteins TYPES - Peptides COMMON-NAME - a D-glutamyl-peptide // UNIQUE-ID - Degradation-Product-of-SulAs TYPES - Modified-Proteins COMMON-NAME - a degradation product of SulA // UNIQUE-ID - Factor-IXa TYPES - Modified-Proteins COMMON-NAME - a factor IXa SYNONYMS - activated factor IX // UNIQUE-ID - Factor-Va TYPES - Modified-Proteins COMMON-NAME - a factor Va SYNONYMS - activated factor V SYNONYMS - proaccelerin // UNIQUE-ID - Factor-VIIa TYPES - Modified-Proteins COMMON-NAME - a factor VIIa // UNIQUE-ID - Factor-VIIIa TYPES - Modified-Proteins COMMON-NAME - a factor VIIIa // UNIQUE-ID - Factor-Xa TYPES - Modified-Proteins COMMON-NAME - a factor Xa SYNONYMS - activated factor X // UNIQUE-ID - Gal-Gal-Xyl-Proteins TYPES - Modified-Proteins COMMON-NAME - 3-β-D-galactosyl-4-β-D-galactosyl-O-β-D-xylosyl-protein // UNIQUE-ID - GlcA-Gal-Gal-Xyl-Proteins TYPES - Modified-Proteins COMMON-NAME - 3-β-D-glucuronosyl-3-β-D-galactosyl-4-β-D-galactosyl-O-β-D-xylosyl-protein // UNIQUE-ID - GLUCOSYL-GLYCOGENIN TYPES - Modified-Proteins COMMON-NAME - a glucosyl-glycogenin COMMENT - Initiation of glycogen biosynthesis in mammals is mediated by the enzyme glycogenin (EC 2.4.1.186). /This unusual enzyme catalyzes two reactions: first, it transfers one glucose unit from UDP–glucose /to form an oligosaccharide covalently attached to itself at a tyrosine residue (Tyr194). /This chemical structre depicts the glucosyl group attached to the tyrosine ring. / /Next the enzyme catalyzes the addition of a second glucose unit, attached by an /α-1,4-glucosidic linkage to the first glucose unit, forming a glycogen primer /|CITS:[15238248][12051921]|. // UNIQUE-ID - Glycoproteins TYPES - Modified-Proteins COMMON-NAME - a glycoprotein // UNIQUE-ID - Gultaminyl-Peptides TYPES - Modified-Proteins COMMON-NAME - L-glutaminyl-peptide // UNIQUE-ID - H-M-glutaryl-CoA-reductase-phosphates TYPES - Modified-Proteins COMMON-NAME - a hydroxymethylglutaryl-CoA reductase (NADPH) phosphate // UNIQUE-ID - Holo-AsbD-Proteins TYPES - Aryl-Carrier-Proteins TYPES - Modified-Proteins COMMON-NAME - a holo-AsbD protein COMMENT - AsbD is an aryl-carrier protein that activates |FRAME: 3-4-DIHYDROXYBENZOATE| prior to its incorporation into |FRAME: CPD-9985|. /The AsbD protein itself needs to be activated by the transfer of a |FRAME: PANTETHEINE-P| group from |FRAME: CO-A| to serine 40 of the apo form, resulting in the active holo form, in a manner similar to other acyl- and aryl-carrier proteins. / /The AsbC protein catalyzes the adenylation of |FRAME: 3-4-DIHYDROXYBENZOATE|, followed by the transfer of the adenylated intermediate to the holo-asbD protein, resulting in |FRAME: 34-DHB-AsbD-Proteins| |CITS: [17346033]|. / /Once activated, the |FRAME: 3-4-DIHYDROXYBENZOATE| moiety can be transferred by AsbE from |FRAME: 34-DHB-AsbD-Proteins| to different receipient molecules, including |FRAME: CPD-11479|, |FRAME: CPD-11480| and |FRAME: CPD-11481| |CITS: [18758617]|. // UNIQUE-ID - Lipoyl-Protein TYPES - Modified-Proteins COMMON-NAME - protein N6-(lipoyl)lysine COMMENT - All protein classes related to lipoyl-containing proteins can be collected here. // UNIQUE-ID - Lipoylated-domains TYPES - Modified-Proteins TYPES - Polypeptides COMMON-NAME - a lipoylated domain SYNONYMS - lipoyl-domain // UNIQUE-ID - LYSOSOMAL-ENZYME-D-MANNOSE TYPES - Modified-Proteins COMMON-NAME - a lysosomal-enzyme-D-mannose // UNIQUE-ID - LYSOSOMAL-ENZYME-N-ETCETERA-MANNOSE TYPES - Modified-Proteins COMMON-NAME - a lysosomal-enzyme N-acetyl-D-glucosaminyl-phospho-D-mannose COMMENT - The N-acetylglucosamine phosphate group can attach to one or more of the mannose residues. // UNIQUE-ID - Malonate-Decarboxylases-Acetyl-Form TYPES - Modified-Proteins COMMON-NAME - a malonate decarboxylase (acetyl form) SYNONYMS - an acetyl-[acyl-carrier protein] // UNIQUE-ID - Malonate-Decarboxylases-Malonyl-Form TYPES - Modified-Proteins COMMON-NAME - a malonate decarboxylase (malonyl form) SYNONYMS - a malonyl-[acyl-carrier protein] // UNIQUE-ID - Mature-P17-Matrix TYPES - Modified-Proteins COMMON-NAME - a mature P17 matrix // UNIQUE-ID - Methionine-synthase-cob-I-alamins TYPES - Modified-Proteins COMMON-NAME - a [methionine synthase]-cob(I)alamin // UNIQUE-ID - Methionine-synthase-cob-II-alamins TYPES - Modified-Proteins COMMON-NAME - a [methionine synthase]-cob(II)alamin // UNIQUE-ID - Methylated-Ribosomal-Protein-L11s TYPES - Ribosomal-Protein-L11s TYPES - Modified-Proteins COMMON-NAME - a methylated ribosomal protein L11 // UNIQUE-ID - Modified-pks13-Proteins TYPES - Modified-Proteins COMMON-NAME - a modified pks13 polyketide synthase // UNIQUE-ID - MONOMER-12378 TYPES - Modified-Proteins COMMON-NAME - a protein-perthiol // UNIQUE-ID - MONOMER-12980 TYPES - Modified-Proteins TYPES - Polypeptides COMMON-NAME - a C5a anaphylatoxin COMMENT - Derived from proteolytic degradation of |FRAME: Complement-C5-precursor|, C5 anaphylatoxin is a mediator /of local inflammatory process. /It induces the contraction of smooth muscle, increases vascular permeability and causes histamine /release from mast cells and basophilic leukocytes. C5a also stimulates the locomotion of /polymorphonuclear leukocytes (chemokinesis) and direct their migration toward sites of inflammation /(chemotaxis). // UNIQUE-ID - Myelin-proteolipids TYPES - Modified-Proteins COMMON-NAME - [myelin proteolipid] // UNIQUE-ID - Myosin-heavy-chain-phosphates TYPES - Modified-Proteins COMMON-NAME - a myosin-heavy chain-phosphate // UNIQUE-ID - N-Acetyl-Peptides TYPES - Modified-Proteins COMMON-NAME - an N-acylated peptide // UNIQUE-ID - N-ACETYLPEPTIDE TYPES - Polypeptides TYPES - Modified-Proteins COMMON-NAME - an Nα-acetyl-peptide // UNIQUE-ID - N-palmitoylglycoproteins TYPES - Modified-Proteins COMMON-NAME - a palmitoylglycoprotein // UNIQUE-ID - NAc-Glc-Man-Man-R TYPES - Modified-Proteins COMMON-NAME - 6-(2-[N-acetyl-β-D-glucosaminyl]-α-D-mannosyl)-β-D-mannosyl-R COMMENT - R represents the remainder of the N-linked oligosaccharide in the glycoprotein acceptor. SYNONYMS - 6-(2-[N-acetyl-b-D-glucosaminyl]-a-D-mannosyl)-b-D-mannosyl-R // UNIQUE-ID - NAc-glucosaminyl-b-D-mannosyl-R TYPES - Modified-Proteins COMMON-NAME - 4-(N-acetyl-β-D-glucosaminyl)-β-D-mannosyl-R COMMENT - R represents the remainder of the N-linked oligosaccharide in the glycoprotein acceptor. SYNONYMS - 4-(N-acetyl-b-D-glucosaminyl)-b-D-mannosyl-R // UNIQUE-ID - Octanoylated-domains TYPES - Modified-Proteins TYPES - Polypeptides COMMON-NAME - an octanoylated domain // UNIQUE-ID - Ox-Glutaredoxins TYPES - Glutaredoxins TYPES - Modified-Proteins COMMON-NAME - an oxidized glutaredoxin // UNIQUE-ID - Ox-Thioredoxin TYPES - Thioredoxin TYPES - Modified-Proteins COMMON-NAME - an oxidized thioredoxin SYNONYMS - Oxidized Thioredoxin // UNIQUE-ID - Oxidized-flavodoxins TYPES - Flavodoxin TYPES - Modified-Proteins COMMON-NAME - an oxidized flavodoxin COMMENT - Flavodoxin (Fld) is a soluble electron shuttle flavoprotein (it binds a flavin mononucleotide) that is /isofunctional with ferredoxin (Fd). In photosynthetic organisms flavodoxin is reduced by the terminal /electron acceptors of |FRAME: CPLX490-3509|. / /Fd and Fld are involved in multiple redox reactions. They can both sustain cyclic as well as linear electron /flow. The cyclic electron flow creates a proton gradient across the photosynthetic membrane and allows /ATP synthesis independent of photosystem II activity. /Linear electron flow, on the other hand, utilizes electrons from the reduced Fd and Fld for NADP+ /reduction in a reaction catalyzed by |FRAME: SYNPCC7942_0978-MONOMER| (FNR). /The source of electrons during linear electron flow is the dissociation of water by /|FRAME: CPLX490-3506|. / /Fd serves also as an electron donor to a number of soluble enzymes involved in nitrogen metabolism, /sulfur metabolism and the regulation of carbon metabolism. Fld can substitute Fd under conditions of /iron deprivation in most cyanobacteria and some algae and may be efficient in reducing most or all of /these soluble enzymes |CITS: [11687213]|. SYNONYMS - flavodoxin (oxidized) // UNIQUE-ID - Oxidized-Plastocyanins TYPES - Plastocyanins TYPES - Modified-Proteins COMMON-NAME - an oxidized plastocyanin // UNIQUE-ID - Oxidized-Putidaredoxins TYPES - Polypeptides TYPES - Modified-Proteins COMMON-NAME - an oxidized putidaredoxin COMMENT - Putidaredoxin (Pdx) is a 106-residue (11.6 kDa) ferredoxin that is produced in |FRAME: TAX-303| strains. It contains a |FRAME: CPD-6| and carries electrons from the flavoprotein putidaredoxin reductase (PdR) to the acceptor cytochrome CYP101, also known as P450cam because it catalyzes camphor hydroxylation. This NADH-supplied electron-transfer chain is one of the best studied of the P450 systems. The structure of Pdx was determined by NMR methods |CITS: [8204575]|. The electronic properties and redox interactions of Pdx have been extensively studied |CITS: [1445875][8845752][8663375][9268300][10433692]|. /Pdx carries one electron at a time, such that the two irons switch between [Fe3+, Fe3+] (oxidized) and [Fe2+, Fe3+] (reduced) states |CITS: [15103126]|. // UNIQUE-ID - P24-Capsid-Proteins TYPES - Modified-Proteins COMMON-NAME - a p24 capsid protein // UNIQUE-ID - Palmitoyl-proteins TYPES - Modified-Proteins COMMON-NAME - a palmitoyl protein SYNONYMS - palmitoyl[protein] // UNIQUE-ID - PHOSPHORHODOPSIN TYPES - Polypeptides TYPES - Modified-Proteins COMMON-NAME - a phosphorhodopsin COMMENT - This is the phosphorylated version of the rhodopsin protein. // UNIQUE-ID - Phosphoribosyl-dephospho-CoA-ACP TYPES - All-ACPs TYPES - Modified-Proteins COMMON-NAME - a 2'-(5''-phosphoribosyl)-3'-dephospho-CoA-[acp] // UNIQUE-ID - Phosphorylated-Caldesmon-Proteins TYPES - Modified-Proteins COMMON-NAME - a caldesmon phosphate // UNIQUE-ID - PqqA-Cleaved-C-terminus TYPES - Modified-Proteins COMMON-NAME - a cleaved PqqA peptide C-terminus // UNIQUE-ID - PqqA-Cleaved-N-terminus TYPES - Modified-Proteins COMMON-NAME - a cleaved PqqA peptide N-terminus // UNIQUE-ID - PqqA-Proteins TYPES - Polypeptides TYPES - Modified-Proteins COMMON-NAME - a PqqA peptide COMMENT - PqqA is a small peptide that is used as the precursor for the biosynthesis of the cofactor |FRAME: PQQ|. /The protein contains the sequence motif -E-X-X-X-Y-, that is, an |FRAME: GLT| and an |FRAME: TYR| separated by three amino acid residues. The L-glutamate and L-tyrosine residues form a C-C bond at C9-C9a (catalyzed by the enzyme encoded by |FRAME: G-11753|), and are then cleaved from the PqqA peptide. // UNIQUE-ID - PqqA-Proteins-with-linked-Glu-Tyr TYPES - Modified-Proteins COMMON-NAME - a PqqA peptide with linked Glu-Tyr residues // UNIQUE-ID - Precursor-of-hydrogenase-3 TYPES - Modified-Proteins COMMON-NAME - a precursor of hydrogenase 3 // UNIQUE-ID - Protein-a-D-glucosyl-1-2-b-D-galactosyls TYPES - Modified-Proteins COMMON-NAME - a protein-α-D-glucosyl-1,2-β-D-galactosyl-L-hydroxylysine // UNIQUE-ID - Protein-b-D-galactosyl-L-hydroxylysines TYPES - Modified-Proteins COMMON-NAME - a protein-β-D-galactosyl-L-hydroxylysine // UNIQUE-ID - Protein-with-LPXTG-motif TYPES - Modified-Proteins COMMON-NAME - a protein with LPXTG motif // UNIQUE-ID - Protein-with-NXTN-motif TYPES - Modified-Proteins COMMON-NAME - a protein with NXTN motif // UNIQUE-ID - Protein-with-sequence-GKFKK TYPES - Modified-Proteins COMMON-NAME - a protein with sequence GKFKK // UNIQUE-ID - Protein-with-sequence-SGFRK-NH2 TYPES - Modified-Proteins COMMON-NAME - a protein with sequence SGFRK-NH2 // UNIQUE-ID - Protein-with-sequence-SGVFTQ TYPES - Modified-Proteins COMMON-NAME - a protein with sequence SGVFTQ // UNIQUE-ID - Protein-with-sequence-SGVTFQGKFKK TYPES - Modified-Proteins COMMON-NAME - a protein with sequence SGVTFQGKFKK // UNIQUE-ID - Protein-with-sequence-TSAVLQ TYPES - Modified-Proteins COMMON-NAME - a protein with-sequence TSAVLQ // UNIQUE-ID - Protein-with-sequence-TSAVLQSGFRK-NH2 TYPES - Modified-Proteins COMMON-NAME - a protein with sequence TSAVLQSGFRK-NH2 // UNIQUE-ID - Proteins-with-correct-disulfides TYPES - Modified-Proteins COMMON-NAME - a protein with correct disulfide bonds // UNIQUE-ID - Proteins-with-incorrect-disulfides TYPES - Modified-Proteins COMMON-NAME - a protein with incorrect disulfide bonds // UNIQUE-ID - pyruvatekinasephosphate TYPES - Modified-Proteins COMMON-NAME - a phosphorylated pyruvate kinase // UNIQUE-ID - Renin-2-heavy-chains TYPES - Polypeptides TYPES - Modified-Proteins COMMON-NAME - a renin-2 heavy chain // UNIQUE-ID - Renin-2-light-chains TYPES - Polypeptides TYPES - Modified-Proteins COMMON-NAME - a renin-2 light chain // UNIQUE-ID - RETINYL-ESTER-RETINOL-BINDING-PROTEIN TYPES - Modified-Proteins COMMON-NAME - a retinyl-ester-(cellular-retinol-binding-protein) // UNIQUE-ID - RPB-Retinol TYPES - Modified-Proteins COMMON-NAME - a retinol-(cellular-retinol-binding-protein) // UNIQUE-ID - RubisCO-N6-methyl-L-lysine TYPES - Modified-Proteins COMMON-NAME - a [ribulose-1,5-bisphosphate-carboxylase]-N6-methyl-L-lysine // UNIQUE-ID - S-FARNESYL-PROTEIN TYPES - Modified-Proteins COMMON-NAME - a farnesylated protein // UNIQUE-ID - SpoIVB-peptidases TYPES - Modified-Proteins TYPES - Polypeptides COMMON-NAME - a SpoIVB peptidase SYNONYMS - a stage IV sporulation protein B SYNONYMS - a sporulation factor IV B protease // UNIQUE-ID - Sulfurated-MPT-Synthases TYPES - Modified-Proteins COMMON-NAME - a sulfurated molybdopterin synthase // UNIQUE-ID - Sulfurylated-ThiF TYPES - Modified-Proteins COMMON-NAME - a sulfurylated sulfur-carrier protein ThiF // UNIQUE-ID - Sulfurylated-ThiI TYPES - Modified-Proteins TYPES - Polypeptides COMMON-NAME - a ThiI persulfide SYNONYMS - a sulfurylated sulfur-carrier protein ThiI // UNIQUE-ID - SUMO-peptides TYPES - Modified-Proteins TYPES - Polypeptides COMMON-NAME - a mature small ubiquitin-like modifier (SUMO) peptide // UNIQUE-ID - ThiS-ThiI-disulfides TYPES - Modified-Proteins COMMON-NAME - a ThiS-ThiI acyl-disulfide // UNIQUE-ID - URIDYLYL-PROTEIN-PII TYPES - Modified-Proteins COMMON-NAME - uridylyl-glutamine synthase PII // UNIQUE-ID - PchE TYPES - Polypeptides TYPES - Non-ribosomal-peptide-synthetases COMMON-NAME - a PchE NRPS protein // UNIQUE-ID - PchF TYPES - Polypeptides TYPES - Non-ribosomal-peptide-synthetases COMMON-NAME - a PchF NRPS protein // UNIQUE-ID - MSCS-FAMILY-TRANSPORTERS TYPES - PC-1 COMMON-NAME - Small Mechanosensitive Ion Channel SYNONYMS - MscS // UNIQUE-ID - PC-19 TYPES - PC-1 COMMON-NAME - P-type-ATPase-Transporters // UNIQUE-ID - PC-2 TYPES - PC-1 COMMON-NAME - ABC-Transporters // UNIQUE-ID - PC-20 TYPES - PC-1 COMMON-NAME - Ars-family-Transporters // UNIQUE-ID - PC-21 TYPES - PC-1 COMMON-NAME - FeoB-family-Transporters // UNIQUE-ID - PC-22 TYPES - PC-1 COMMON-NAME - STP-family-Transporters // UNIQUE-ID - PC-23 TYPES - PC-1 COMMON-NAME - ArAAP-family-Transporters // UNIQUE-ID - PC-24 TYPES - PC-1 COMMON-NAME - GntP-family-Transporters // UNIQUE-ID - PC-25 TYPES - PC-1 COMMON-NAME - RND-family-Transporters // UNIQUE-ID - PC-26 TYPES - PC-1 COMMON-NAME - SMR-family-Transporters // UNIQUE-ID - PC-27 TYPES - PC-1 COMMON-NAME - GPH-Transporters // UNIQUE-ID - PC-28 TYPES - PC-1 COMMON-NAME - BCCT-family-Transporters // UNIQUE-ID - PC-29 TYPES - PC-1 COMMON-NAME - POT-family-Transporters // UNIQUE-ID - PC-30 TYPES - PC-1 COMMON-NAME - LctP-family-Transporters // UNIQUE-ID - PC-31 TYPES - PC-1 COMMON-NAME - CDF-family-Transporters // UNIQUE-ID - PC-32 TYPES - PC-1 COMMON-NAME - Dcu-family-Transporters // UNIQUE-ID - PC-33 TYPES - PC-1 COMMON-NAME - NUP-family-Transporters // UNIQUE-ID - PC-34 TYPES - PC-1 COMMON-NAME - TDT-family-Transporters // UNIQUE-ID - PC-35 TYPES - PC-1 COMMON-NAME - RhaT-family-Transporters // UNIQUE-ID - PC-36 TYPES - PC-1 COMMON-NAME - PiT-family-Transporters // UNIQUE-ID - PC-37 TYPES - PC-1 COMMON-NAME - KdgT-family-Transporters // UNIQUE-ID - PC-38 TYPES - PC-1 COMMON-NAME - NCS1-family-Transporters // UNIQUE-ID - PC-39 TYPES - PC-1 COMMON-NAME - LysE-family-Transporters // UNIQUE-ID - PC-40 TYPES - PC-1 COMMON-NAME - SSS-family-Transporters // UNIQUE-ID - PC-41 TYPES - PC-1 COMMON-NAME - DAACS-family-Transporters // UNIQUE-ID - PC-42 TYPES - PC-1 COMMON-NAME - AGCS-family-Transporters // UNIQUE-ID - PC-43 TYPES - PC-1 COMMON-NAME - GltS-family-Transporters // UNIQUE-ID - PC-44 TYPES - PC-1 COMMON-NAME - LIVCS-family-Transporters // UNIQUE-ID - PC-45 TYPES - PC-1 COMMON-NAME - DASS-family-Transporters // UNIQUE-ID - PC-46 TYPES - PC-1 COMMON-NAME - CaCA-family-transporters // UNIQUE-ID - PC-47 TYPES - PC-1 COMMON-NAME - CPA1-family-Transporters // UNIQUE-ID - PC-48 TYPES - PC-1 COMMON-NAME - NhaA-family-Transporters // UNIQUE-ID - PC-49 TYPES - PC-1 COMMON-NAME - MIT-family-Transporters // UNIQUE-ID - PC-50 TYPES - PC-1 COMMON-NAME - CPA2-family-Transporters // UNIQUE-ID - PC-52 TYPES - PC-1 COMMON-NAME - Trk-family-Transporters // UNIQUE-ID - PC-53 TYPES - PC-1 COMMON-NAME - MIP-family-Transporters // UNIQUE-ID - PC-54 TYPES - PC-1 COMMON-NAME - NCS2-family-Transporters // UNIQUE-ID - PC-55 TYPES - PC-1 COMMON-NAME - FNT-family-Transporters // UNIQUE-ID - PC-56 TYPES - PC-1 COMMON-NAME - VIC-family-Transporters // UNIQUE-ID - PC-57 TYPES - PC-1 COMMON-NAME - ClC-family-Transporters // UNIQUE-ID - PC-59 TYPES - PC-1 COMMON-NAME - PST-family-Transporters // UNIQUE-ID - PC-6 TYPES - PC-1 COMMON-NAME - MFS-Transporters // UNIQUE-ID - PC-60 TYPES - PC-1 COMMON-NAME - PnuC-family-Transporters // UNIQUE-ID - PC-62 TYPES - PC-1 COMMON-NAME - KUP-family-Transporters // UNIQUE-ID - PC-63 TYPES - PC-1 COMMON-NAME - Amt-family-Transporters // UNIQUE-ID - PC-66 TYPES - PC-1 COMMON-NAME - SulP-family-Transporters // UNIQUE-ID - PC-67 TYPES - PC-1 COMMON-NAME - NhaB-family-Transporters // UNIQUE-ID - PC-68 TYPES - PC-1 COMMON-NAME - MATE-family-Transporters // UNIQUE-ID - PC-7 TYPES - PC-1 COMMON-NAME - APC-family-Transporters // UNIQUE-ID - PC-70 TYPES - PC-1 COMMON-NAME - Nramp-family-Transporters // UNIQUE-ID - PC-71 TYPES - PC-1 COMMON-NAME - DcuC-family-Transporters // UNIQUE-ID - PC-72 TYPES - PC-1 COMMON-NAME - Rht-family-Transporters // UNIQUE-ID - PC-73 TYPES - PC-1 COMMON-NAME - OFeT-family-Transporters // UNIQUE-ID - PC-74 TYPES - PC-1 COMMON-NAME - ABGT-family-Transporters // UNIQUE-ID - PC-75 TYPES - PC-1 COMMON-NAME - AEC-family-Transpoters // UNIQUE-ID - PC-76 TYPES - PC-1 COMMON-NAME - MscL-family-Transporters // UNIQUE-ID - PC-8 TYPES - PC-1 COMMON-NAME - PTS-Transporters // UNIQUE-ID - PUP-FAMILY-TRANSPORTERS TYPES - PC-1 // UNIQUE-ID - Uhp-C TYPES - PC-6 TYPES - Polypeptides // UNIQUE-ID - PC-9 TYPES - PC-8 TYPES - Polypeptides COMMON-NAME - Sugar-Specific-Proteins // UNIQUE-ID - 1-Cys-Peroxiredoxins TYPES - Peroxiredoxins COMMON-NAME - a 1-Cys peroxiredoxin COMMENT - Peroxiredoxins are a ubiquitous family of antioxidant enzymes which have been identified in eubacteria, /archaea, yeast, algae, higher plants, and animals |CITS: [12714747]|. /All peroxiredoxins share the same basic catalytic mechanism, in which an activated cysteine /(the peroxidative cysteine) is oxidized to a sulfenic acid by the peroxide substrate. /They have a rather low activity, but possess a broad substrate specificity. /Substrates for peroxiredoxins include hydrogen peroxides, alkyl hydroperoxides, and peroxynitrites. / /Reductive regeneration of the oxidized catalytic thiol depends on glutathione, thioredoxin, glutaredoxin, /cyclophilin, and/or tryparedoxin |CITS: [16284092]|. / /In plants, peroxiredoxins are categorized into four subclasses based on subunit composition, number /and location of the conserved cysteine residues, and the sequence environment of the catalytic center. /The four types are |FRAME: 2-Cys-Peroxiredoxins|, |FRAME: 1-Cys-Peroxiredoxins|, /|FRAME: Type-II-Peroxiredoxins| and |FRAME: Q-Type-Peroxiredoxins|. / /|FRAME: 1-Cys-Peroxiredoxins| contains a single conserved catalytic cysteine and is /preferentially expressed in plants in the embryo and aleurone |CITS: [8914536]|. // UNIQUE-ID - 2-Cys-Peroxiredoxins TYPES - Peroxiredoxins COMMON-NAME - a 2-Cys peroxiredoxin COMMENT - Peroxiredoxins are a ubiquitous family of antioxidant enzymes which have been identified in eubacteria, /archaea, yeast, algae, higher plants, and animals |CITS: [12714747]|. /All peroxiredoxins share the same basic catalytic mechanism, in which an activated cysteine /(the peroxidative cysteine) is oxidized to a sulfenic acid by the peroxide substrate. /They have a rather low activity, but possess a broad substrate specificity. /Substrates for peroxiredoxins include hydrogen peroxides, alkyl hydroperoxides, and peroxynitrites. / /Reductive regeneration of the oxidized catalytic thiol depends on glutathione, thioredoxin, glutaredoxin, /cyclophilin, and/or tryparedoxin |CITS: [16284092]|. / /In plants, peroxiredoxins are categorized into four subclasses based on subunit composition, number /and location of the conserved cysteine residues, and the sequence environment of the catalytic center. /The four types are |FRAME: 2-Cys-Peroxiredoxins|, |FRAME: 1-Cys-Peroxiredoxins|, /|FRAME: Type-II-Peroxiredoxins| and |FRAME: Q-Type-Peroxiredoxins|. / /|FRAME: 2-Cys-Peroxiredoxins| contains two conserved cysteines. These are /homodimeric enzymes where the two subunits interact in the catalytic cycle and are linked via a /disulfide bond in the oxidized form. Eukaryotic 2-Cys proxiredoxins, which are exclusively localized /in the chloroplast, are also shown to regulate H2O2-mediated signal transduction |CITS: [9263459]|. // UNIQUE-ID - Q-Type-Peroxiredoxins TYPES - Peroxiredoxins COMMON-NAME - a Q-type peroxiredoxin COMMENT - Peroxiredoxins are a ubiquitous family of antioxidant enzymes which have been identified in eubacteria, /archaea, yeast, algae, higher plants, and animals |CITS: [12714747]|. /All peroxiredoxins share the same basic catalytic mechanism, in which an activated cysteine /(the peroxidative cysteine) is oxidized to a sulfenic acid by the peroxide substrate. /They have a rather low activity, but possess a broad substrate specificity. /Substrates for peroxiredoxins include hydrogen peroxides, alkyl hydroperoxides, and peroxynitrites. / /Reductive regeneration of the oxidized catalytic thiol depends on glutathione, thioredoxin, glutaredoxin, /cyclophilin, and/or tryparedoxin |CITS: [16284092]|. / /In plants, peroxiredoxins are categorized into four subclasses based on subunit composition, number /and location of the conserved cysteine residues, and the sequence environment of the catalytic center. /The four types are |FRAME: 2-Cys-Peroxiredoxins|, |FRAME: 1-Cys-Peroxiredoxins|, /|FRAME: Type-II-Peroxiredoxins| and |FRAME: Q-Type-Peroxiredoxins|. / /|FRAME: Q-Type-Peroxiredoxins| ((also known as atypical 2-Cys peroxiredoxins): these are /homologues of the E. coli bacterioferritin co-migrating protein and function as monomers /|CITS: [10998352]|. // UNIQUE-ID - Type-II-Peroxiredoxins TYPES - Peroxiredoxins COMMON-NAME - a type II peroxiredoxin COMMENT - Peroxiredoxins are a ubiquitous family of antioxidant enzymes which have been identified in eubacteria, /archaea, yeast, algae, higher plants, and animals |CITS: [12714747]|. /All peroxiredoxins share the same basic catalytic mechanism, in which an activated cysteine /(the peroxidative cysteine) is oxidized to a sulfenic acid by the peroxide substrate. /They have a rather low activity, but possess a broad substrate specificity. /Substrates for peroxiredoxins include hydrogen peroxides, alkyl hydroperoxides, and peroxynitrites. / /Reductive regeneration of the oxidized catalytic thiol depends on glutathione, thioredoxin, glutaredoxin, /cyclophilin, and/or tryparedoxin |CITS: [16284092]|. / /In plants, peroxiredoxins are categorized into four subclasses based on subunit composition, number /and location of the conserved cysteine residues, and the sequence environment of the catalytic center. /The four types are |FRAME: 2-Cys-Peroxiredoxins|, |FRAME: 1-Cys-Peroxiredoxins|, /|FRAME: Type-II-Peroxiredoxins| and |FRAME: Q-Type-Peroxiredoxins|. / /|FRAME: Type-II-Peroxiredoxins| (also known as atypical 2-Cys peroxiredoxins) can use /thioredoxin and glutaredoxin as the reductant and can exist in multiple isoforms localized in plants in /many subcellular compartments, including one form in plastids |CITS: [12913160]|. // UNIQUE-ID - 20S-proteasome-subcomplex-subunit--alpha TYPES - Polypeptides COMMON-NAME - 20S proteasome subcomplex, subunit α7 // UNIQUE-ID - 20S-proteasome-subcomplex-subunit-beta5 TYPES - Polypeptides COMMON-NAME - 20S proteasome subcomplex, subunit β5 // UNIQUE-ID - 20S-proteasome-subcomplex-subunit-beta6 TYPES - Polypeptides COMMON-NAME - 20S proteasome subcomplex, subunit β6 // UNIQUE-ID - 20S-proteasome-subcomplex-subunit-beta7 TYPES - Polypeptides COMMON-NAME - 20S proteasome subcomplex, subunit β7 // UNIQUE-ID - 3-H-3-M-GLUTARYL-COA-REDUCTASES TYPES - Polypeptides COMMON-NAME - a 3-hydroxy-3-methylglutaryl-CoA reductase // UNIQUE-ID - All-ACPs TYPES - Polypeptides COMMON-NAME - all acyl carrier proteins COMMENT - This class includes all the acyl-carrier proteins, which consist of the acyl-carrier proteins (ACPs) /of fatty acid synthases, ACPs of polyketide synthases (PKSs), and peptidyl carrier proteins (PCPs) /and aryl carrier proteins of non-ribosomal peptide synthetases (NRPSs). / /Acyl carrier proteins exist as either a distinct domain within a large multifunctional protein, or as discrete /soluble single-domain proteins. // UNIQUE-ID - Alpha-tubulins TYPES - Polypeptides COMMON-NAME - α-tubulin // UNIQUE-ID - Angiotensinogens TYPES - Polypeptides COMMON-NAME - an angiotensinogen // UNIQUE-ID - Angiotensins TYPES - Polypeptides COMMON-NAME - an angiotensin // UNIQUE-ID - Apo-Propionyl-CoA-CO2-ligases TYPES - Polypeptides COMMON-NAME - apo-[propionyl-CoA:carbon-dioxide ligase (ADP-forming)] // UNIQUE-ID - Asp-3 TYPES - Polypeptides // UNIQUE-ID - ATPase-Na+K+-transporting-subunit-alpha TYPES - Polypeptides COMMON-NAME - ATPase, Na+/K+ transporting, subunit α // UNIQUE-ID - ATPase-Na+K+-transporting-subunit-beta TYPES - Polypeptides COMMON-NAME - ATPase, Na+/K+ transporting, subunit β // UNIQUE-ID - BCCP TYPES - Polypeptides COMMON-NAME - BCCP family SYNONYMS - biotin-carboxyl-carrier protein // UNIQUE-ID - BCCP-monomers TYPES - Polypeptides COMMON-NAME - a BCCP (monomer) SYNONYMS - biotin-carboxyl-carrier protein SYNONYMS - BCCP SYNONYMS - biotin-carboxyl-carrier protein monomer // UNIQUE-ID - Beta-adrenergic-receptors TYPES - Polypeptides COMMON-NAME - a β-adrenergic receptor // UNIQUE-ID - C2-Proteins TYPES - Polypeptides COMMON-NAME - complement component protein C2 // UNIQUE-ID - C4-Proteins TYPES - Polypeptides COMMON-NAME - complement component protein C4 // UNIQUE-ID - Calmodulins TYPES - Polypeptides COMMON-NAME - a calmodulin COMMENT - Calmodulin is a calcium-binding protein expressed in all eukaryotic cells. It can bind to and regulate a number of different protein targets, thereby affecting many different cellular functions. // UNIQUE-ID - Cellular-Retinol-Binding-Proteins TYPES - Polypeptides COMMON-NAME - a cellular-retinol-binding protein // UNIQUE-ID - cytochrome-c-oxidase-subunit-IV TYPES - Polypeptides COMMON-NAME - cytochrome c oxidase, subunit IV // UNIQUE-ID - cytochrome-c-oxidase-subunit-VIa TYPES - Polypeptides COMMON-NAME - cytochrome c oxidase, subunit VIa // UNIQUE-ID - cytochrome-c-oxidase-subunit-VIb TYPES - Polypeptides COMMON-NAME - cytochrome c oxidase, subunit VIb // UNIQUE-ID - cytochrome-c-oxidase-subunit-VIIa TYPES - Polypeptides COMMON-NAME - cytochrome c oxidase, subunit VIIa // UNIQUE-ID - cytochrome-c-oxidase-subunit-VIIb TYPES - Polypeptides COMMON-NAME - cytochrome c oxidase, subunit VIIb // UNIQUE-ID - cytochrome-c-oxidase-subunit-VIII TYPES - Polypeptides COMMON-NAME - cytochrome c oxidase, subunit VIII // UNIQUE-ID - Cytochromes TYPES - Polypeptides COMMON-NAME - a cytochrome // UNIQUE-ID - DNA-directed-RNA-polymerases TYPES - Polypeptides COMMON-NAME - [a DNA-directed RNA-polymerase] // UNIQUE-ID - EIF5A TYPES - Polypeptides COMMON-NAME - an eIF5A protein COMMENT - eIF5A is the short name for the a eukaryotic translation initiation factor 5A. // UNIQUE-ID - Elongation-factor-2 TYPES - Polypeptides COMMON-NAME - elongation-factor 2 // UNIQUE-ID - Factor-IX TYPES - Polypeptides COMMON-NAME - a factor IX COMMENT - |FRAME: Factor-IX "Factor IX"| (also known as the Christmas factor) is one of the serine proteases (|FRAME: 3.4.21.22-RXN "EC 3.4.21.22"|) of the coagulation system. / /|FRAME: Factor-IX "Factor IX"| is activated by |FRAME: Factor-XIa "factor XIa"| or |FRAME: Factor-VIIa "factor VIIa"| to the active form, |FRAME: Factor-IXa "factor IXa"|. When activated, and in the presence of |FRAME: CA+2|, membrane phospholipids, and |FRAME: Factor-VIII| cofactor, it hydrolyses one arginine-isoleucine bond in |FRAME: Factor-X "factor X"| to form |FRAME: Factor-Xa "factor Xa"|. / /Deficiency of this protein causes hemophilia B. SYNONYMS - Christmas factor // UNIQUE-ID - Factor-V TYPES - Polypeptides COMMON-NAME - a factor V COMMENT - |FRAME: Factor-V "Factor V"| is a protein of the coagulation system. In contrast to most other coagulation factors, it is not enzymatically active but functions as a cofactor. / /Upon its activation by |FRAME: Thrombins "thrombin"| factor V is spliced in two chains that noncovalently bind to each other in a reaction mediated by calcium. In its active form, known as |FRAME: Factor-Va "factor Va"|, it functions as a cofactor of the thrombinase complex. / /The |FRAME: Factor-Xa "activated factor X"| enzyme requires |FRAME: CA+2| and activated factor V to convert |FRAME: Prothrombins "prothrombin"| to |FRAME: Thrombins "thrombin"| on the cell surface membrane. / /|FRAME: Factor-Va "Factor Va"| is degraded by activated protein C, one of the principal physiological inhibitors of coagulation (see |FRAME: 3.4.21.69-RXN "EC 3.4.21.69"|). // UNIQUE-ID - Factor-VII TYPES - Polypeptides COMMON-NAME - a factor VII COMMENT - |FRAME: Factor-VII "Factor VII"| (formerly known as proconvertin) is one of the central proteins in the coagulation cascade. It is an enzyme (|FRAME: 3.4.21.21-RXN "EC 3.4.21.21"|) of the serine protease class. /The main role of factor VII is to initiate the process of coagulation in conjunction with tissue factor (TF). / /Once bound to TF, |FRAME: Factor-VII "factor VII"| is activated to |FRAME: Factor-VIIa "factor VIIa"| by several proteases, among which are |FRAME: Thrombins "thrombin"| (factor IIa), |FRAME: Factor-Xa "factor Xa"|, |FRAME: Factor-IXa "factor IXa"|, |FRAME: Factor-XIIa "factor XIIa"|, and the factor VIIa-TF complex itself. / /The most important substrates for the Factor VIIa-TF complex are |FRAME: Factor-X "factor X"| and |FRAME: Factor-IX "factor IX"|. SYNONYMS - proconvertin // UNIQUE-ID - Factor-VIII TYPES - Polypeptides COMMON-NAME - a factor VIII COMMENT - |FRAME: Factor-VIII "Factor VIII"| is an essential blood clotting factor also known as anti-hemophilic factor (AHF). It is a cofactor for |FRAME: Factor-IXa "factor IXa"| which, in the presence of |FRAME: CA+2| and phospholipids, forms a complex that converts |FRAME: Factor-X "factor X"| to the activated form |FRAME: Factor-Xa "factor Xa"|. / /The factor VIII gene produces two alternatively spliced transcripts. Transcript variant 1 encodes a large glycoprotein, isoform a, which circulates in plasma and associates with von Willebrand factor in a noncovalent complex. This protein undergoes multiple cleavage events. Transcript variant 2 encodes a putative small protein, isoform b, which consists primarily of the phospholipid binding domain of factor VIIIc. This binding domain is essential for coagulant activity. SYNONYMS - FVIII SYNONYMS - anti-hemophilic factor // UNIQUE-ID - Factor-X TYPES - Polypeptides COMMON-NAME - a factor X COMMENT - |FRAME: Factor-X "Factor X"|, also known by the eponym Stuart-Prower factor or as thrombokinase, is an enzyme (|FRAME: 3.4.21.6-RXN "EC 3.4.21.6"|) of the coagulation cascade. It is a serine endopeptidase (protease group S1). / /Factor X is synthesized in the liver and requires vitamin K for its synthesis. It is activated into the active form |FRAME: Factor-Xa "factor Xa"| by one of two complexes: a complex known as "intrinsic Xase", which includes /|FRAME: Factor-IX "factor IX"| and its its cofactor, |FRAME: Factor-VIII "factor VIII"|, or a complex known as "extrinsic Xase", which includes /|FRAME: Factor-VII "factor VII"| with its cofactor, tissue factor (TF). / /|FRAME: Factor-X "Factor X"| acts by cleaving prothrombin in two places (an arg-thr and then an arg-ile bond), generating the active thrombin. This process is optimized when factor Xa is complexed with activated co-factor V in the prothrombinase complex. SYNONYMS - Stuart-Prower factor SYNONYMS - thrombokinase // UNIQUE-ID - Factor-XII TYPES - Polypeptides COMMON-NAME - a factor XII COMMENT - |FRAME: Factor-XII "Factor XII"| is a plasma protein, the zymogen form of |FRAME: Factor-XIIa "factor XIIa"|, an enzyme (|FRAME: 3.4.21.38-RXN "EC 3.4.21.38"|) of the serine protease (or serine endopeptidase) class. / /Factor XII is the first enzyme in the blood coagulation cascade, and is activated by negatively charged surfaces to become the active form, factor XIIa . When active, it activates |FRAME: Factor-XI "factor XI"| and prekallikrein. SYNONYMS - Hageman factor // UNIQUE-ID - Fas-activated-ser-thre-protein TYPES - Polypeptides COMMON-NAME - Fas-activated serine/threonine protein // UNIQUE-ID - Ferredoxins TYPES - Polypeptides COMMON-NAME - a ferredoxin COMMENT - Ferredoxins are present in all organisms, from bacteria and archaea to higher eukaryotes. /They are small and acidic proteins with prosthetic groups composed of iron and sulfur atoms, which are referred to /as |FRAME: FeS-Centers|. The ferredoxins function as intracellular electron carriers with a low reduction potential. / /Ferredoxins are classified into three groups according to the types and numbers of their Fe-S clusters. /The first group consists of monomeric proteins containing one [2Fe-2S] cluster, which includes ferredoxins /that transfer electrons in redox chains linked to hydroxylases and oxygenases in a wide range of organisms /(from bacteria to mammals), and which includes plant and algal ferredoxins that function as electron carriers /in photosynthesis. / /The other two groups consist of ubiquitous proteins containing [3Fe-4S]/ [4Fe-4S] and are typically found in bacteria. /They may differ in cluster type (3Fe or 4Fe), number (one or two), and length of polypeptide chain /(up to over 100 residues), and include the relatively small 2[4Fe-4S] ferredoxins that were first isolated from /anaerobic bacteria |CITS: [16466637]|. // UNIQUE-ID - Ferroproteins TYPES - Polypeptides COMMON-NAME - a ferroprotein // UNIQUE-ID - FeS-Proteins TYPES - Polypeptides COMMON-NAME - a FeS-protein COMMENT - This compound class stands for generic and unspecified FeS-proteins. In this class, they are in their standard, non-reduced form. SYNONYMS - oxidized Fe-S protein // UNIQUE-ID - FeS-Proteins-Reduced TYPES - Polypeptides COMMON-NAME - a reduced FeS-protein COMMENT - This compound class stands for generic and unspecified, reduced FeS-proteins. SYNONYMS - FeS-Proteins-2e SYNONYMS - reduced Fe-S protein // UNIQUE-ID - Fibrin TYPES - Polypeptides COMMON-NAME - a fibrin COMMENT - |FRAME: Fibrin| is a fibrous, non globular protein involved in the clotting of blood. It is polymerised to form a "mesh" that forms a hemostatic plug or clot (in conjunction with platelets) over a wound site. // UNIQUE-ID - Fibrinogen TYPES - Polypeptides COMMON-NAME - a fibrinogen COMMENT - Fibrinogen is a soluble plasma glycoprotein that is synthesised by the liver. Fibrinogen is converted by the serine protease |FRAME: Thrombins "thrombin"| into its active form, |FRAME: Fibrin "fibrin"| (see |FRAME: 3.4.21.5-RXN "EC 3.4.21.5"|. Fibrin is cross linked by |FRAME: 2.3.2.13-RXN "factor XIII"| to form a clot (see |FRAME: 2.3.2.13-RXN "EC 2.3.2.13"|). SYNONYMS - factor I // UNIQUE-ID - Fibrinopeptide-A TYPES - Polypeptides COMMON-NAME - a fibrinopeptide A // UNIQUE-ID - Fibrinopeptide-B TYPES - Polypeptides COMMON-NAME - a fibrinopeptide B // UNIQUE-ID - Flavoproteins TYPES - Polypeptides COMMON-NAME - a flavoprotein // UNIQUE-ID - G-protein-coupled-receptors TYPES - Polypeptides COMMON-NAME - a G-protein-coupled-receptor // UNIQUE-ID - Gln-A TYPES - Polypeptides COMMON-NAME - gln protein A // UNIQUE-ID - Glu-plasminogens TYPES - Polypeptides COMMON-NAME - a Glu-plasminogen // UNIQUE-ID - Glutaredoxins TYPES - Polypeptides COMMON-NAME - a glutaredoxin COMMENT - Glutaredoxins are small redox proteins of the TRX superfamily using glutathione (GSH) as electron donor. /Like thioredoxins they reduce intracellular disulfides, but they are much more efficient than thioredoxins in /catalyzing protein deglutathionylation by reduction of protein-GSH mixed disulfides |CITS:[12682041]|. /The glutaredoxins seem to play a major role in oxidative stress responses and iron-sulfur cluster /assembly . / /Glutaredoxins have been divided into three classes - the "classical" dithiol proteins, monothiol proteins, /and GST-related dithiol proteins. /The classical dithiol glutaredoxins contain two cysteine residues, usually in a CPYC active-site motif; /while the monothiol glutaredoxins contain a single cysteine found in a CGFS motif in the active site. /The third group includes atypical glutaredoxins, which are very similar to glutathione-S-transferase (GST) /proteins, but incorporate the CPYC motif |CITS: [11898418]|. More recently a fourth group of glutaredoxins /has been described in higher plants. Proteins in this group include a CCXC or CCXS active-site motif /|CITS: [17089213]|. / / /Glutaredoxins can use a dithiol mechanism similar to that employed by thioredoxins. However, /unlike thioredoxins glutaredoxins can utilize the thiols from GSH in solution together with the glutaredoxin /N-terminal cysteine in a mechanism that is called the monothiol mechanism. // UNIQUE-ID - Glycogen-synthases-D TYPES - Polypeptides COMMON-NAME - [glycogen synthase D] // UNIQUE-ID - Glycogen-synthases-I TYPES - Polypeptides COMMON-NAME - [glycogen synthase I] // UNIQUE-ID - Goodpasture-antigen-binding-protein TYPES - Polypeptides COMMON-NAME - Goodpasture antigen-binding protein // UNIQUE-ID - H-M-glutaryl-CoA-reductases TYPES - Polypeptides COMMON-NAME - a hydroxymethylglutaryl-CoA reductase (NADPH) // UNIQUE-ID - Hemoglobin-alpha TYPES - Polypeptides COMMON-NAME - a hemoglobin α subunit // UNIQUE-ID - Hemoglobin-beta TYPES - Polypeptides COMMON-NAME - a hemoglobin β subunit // UNIQUE-ID - Histones TYPES - Polypeptides COMMON-NAME - a histone // UNIQUE-ID - HMG-CoA-reductase-NADPH-kinases TYPES - Polypeptides COMMON-NAME - [hydroxymethylglutaryl-CoA reductase (NADPH)] kinase // UNIQUE-ID - Hybrid-Cluster-Proteins TYPES - Polypeptides COMMON-NAME - a hybrid-cluster protein COMMENT - The physiological roles of the hybrid-cluster protein (HCP), the gene product of the hcp gene in E.coli, is not known as of June 2003. HCP and its corresponding NADH oxidoreductase (the product of the hcr gene) are detected only during anaerobic growth in the presence of nitrate and nitrite. // UNIQUE-ID - IkB-proteins TYPES - Polypeptides COMMON-NAME - an IκB protein // UNIQUE-ID - isocitrate-dehydrogenase-3-NAD+-subunit- TYPES - Polypeptides COMMON-NAME - isocitrate dehydrogenase 3 (NAD+), subunit γ // UNIQUE-ID - L-leucyl-protein TYPES - Polypeptides // UNIQUE-ID - Leader-Peptides TYPES - Polypeptides COMMENT - A leader peptide is typically coded for by the first gene in an operon controlled by /attenuation. Translation of the leader peptide can influence which alternative mRNA /secondary structure forms, thereby enhancing or decreasing transcription termination /by the attenuator. / // UNIQUE-ID - Leader-Sequences TYPES - Polypeptides COMMON-NAME - a leader sequence // UNIQUE-ID - METHIONINE-SYNTHASE-METHYLCOBALAMIN TYPES - Polypeptides COMMON-NAME - a [methionine synthase]-methylcob(I)alamin // UNIQUE-ID - mitochondrial-F0-complex-subunit-c TYPES - Polypeptides COMMON-NAME - mitochondrial F0 complex, subunit c // UNIQUE-ID - mitochondrial-F0-complex-subunit-f TYPES - Polypeptides COMMON-NAME - mitochondrial F0 complex, subunit f // UNIQUE-ID - mitochondrial-F0-complex-subunit-s TYPES - Polypeptides COMMON-NAME - mitochondrial F0 complex, subunit s // UNIQUE-ID - mitogen-activated-protein-kinase-kinase TYPES - Polypeptides COMMON-NAME - mitogen-activated protein kinase kinase // UNIQUE-ID - MONOMER3DJ-10 TYPES - Polypeptides COMMON-NAME - vacuolar ATPase V0 subcomplex, subunit e // UNIQUE-ID - MONOMER3DJ-12 TYPES - Polypeptides COMMON-NAME - vacuolar ATPase V0 subcomplex, subunit s1 SYNONYMS - lysosomal accessory protein 1 // UNIQUE-ID - MONOMER3DJ-7 TYPES - Polypeptides COMMON-NAME - vacuolar ATPase V0 subcomplex, subunit d // UNIQUE-ID - MTAC TYPES - Polypeptides COMMON-NAME - MtaC protein COMMENT - Methanogenesis from methanol begins with the formation of methyl-coenzyme M (CoM) from methanol /and coenzyme M. /An enzyme system composed of three polypeptides catalyzes this methyl transfer reaction; /MtaB (formerly known as methyltransferase 1), MtaC, which binds a corrinoid prosthetic group |CITS: [9654068]|, /and MtaA (formerly known as methyltransferase 2). /MtaB and MtaC are known to form a tight heterodimeric complex. MtaB catalyzes the transfer of the /methyl group from methanol to the corrinoid group bound to MtaC |CITS: [9057830]|. MtaA then transfers the methyl /group to coenzyme M |CITS:[6438059]|. /It has been shown that MtaC can be subtituted by free cob(I)alamin |CITS: [10215883]|. // UNIQUE-ID - MtbC-Proteins TYPES - Polypeptides COMMON-NAME - an MtbC protein // UNIQUE-ID - MtmC-Proteins TYPES - Polypeptides COMMON-NAME - an MtmC protein // UNIQUE-ID - MtqC-Proteins TYPES - Polypeptides COMMON-NAME - an MtqC protein // UNIQUE-ID - MtsB-Proteins TYPES - Polypeptides COMMON-NAME - an MtsB protein // UNIQUE-ID - MttC-Proteins TYPES - Polypeptides COMMON-NAME - an MttC protein // UNIQUE-ID - Mycoredoxins TYPES - Polypeptides COMMON-NAME - a mycoredoxin // UNIQUE-ID - Myosin-heavy-chains TYPES - Polypeptides COMMON-NAME - a myosin heavy chain // UNIQUE-ID - Non-lipoylated-domains TYPES - Polypeptides COMMON-NAME - a non-lipoylated apo domain COMMENT - |FRAME: LIPOIC-ACID "Lipoate"| is an organosulfur compound that is used as an essential cofactor by many enzyme complexes. The functional group of lipoate is a ditholane ring, which is a cyclic disulfide. / /The enzyme complexes that require lipoate have a dedicated |FRAME: Non-lipoylated-domains "lipoyl domain"|, and lipoate is actually produced on this domain. The precursor |FRAME: CPD-195| molecule is first attached to a specific |FRAME: LYS| residue within the lipoyl domain (producing |FRAME: Octanoylated-domains|), and is then converted to lipoate by the enzyme |FRAME: CPLX0-782|, resulting in |FRAME: Lipoylated-domains|. / /|FRAME: CPLX0-782 "Lipoate synthase"| not only catalyzes the reaction, but is also the source of the two sulfur atoms. SYNONYMS - apo-domain // UNIQUE-ID - O-D-MANNOSYL-PROTEIN TYPES - Polypeptides COMMON-NAME - an O-D-mannosyl-protein // UNIQUE-ID - O-phospho-tau-proteins TYPES - Polypeptides COMMON-NAME - an O-phospho-tau protein // UNIQUE-ID - Peptides TYPES - Polypeptides COMMON-NAME - a peptide COMMENT - This compound class stands for generic and unspecified peptides, that can be modified by enzymes. /Chemically, there is not any real difference compared to proteins, except that peptides tend to be small. SYNONYMS - peptide // UNIQUE-ID - Peptides-with-Leader-Sequence TYPES - Polypeptides COMMON-NAME - a peptide with a leader sequence // UNIQUE-ID - Peptides-with-pro-in-3rd-position TYPES - Polypeptides COMMON-NAME - a peptide with proline in the third position SYNONYMS - Xaa-Xaa-Pro-Yaa- // UNIQUE-ID - Phospho-DNA-directed-RNA-polymerases TYPES - Polypeptides COMMON-NAME - phospho-[DNA-directed RNA-polymerase] // UNIQUE-ID - Phosphorylases TYPES - Polypeptides COMMON-NAME - a phosphorylase // UNIQUE-ID - Phosphotropomyocins TYPES - Polypeptides COMMON-NAME - an O-phosphotropomyocin // UNIQUE-ID - Plastocyanins TYPES - Polypeptides COMMON-NAME - a plastocyanin // UNIQUE-ID - Poly-Gamma-Glutamylcysteine-Glycines TYPES - Polypeptides COMMON-NAME - a poly γ-glutamylcysteine-glycine SYNONYMS - a poly γ-glutamylcysteine-glycine // UNIQUE-ID - Polyketide-synthase-PKS13 TYPES - Polypeptides COMMON-NAME - a polyketide synthase PKS13 COMMENT - PKS13 is a member of the type I polyketide synthase gene family found in Mycobacteria. /Sequence analysis revealed that it contains two non-equivalent phosphopantetheine-binding, /ketoacyl synthase, acyl transferase, and thioesterase domains |CITS: [14695899][15653820]|. SYNONYMS - PKS13 // UNIQUE-ID - Protein TYPES - Polypeptides COMMON-NAME - Protein COMMENT - This frame should NOT be used in any reactions. /The frame is created only to provide the Marvin structure editor with the ability of displaying a /"Protein" super atom as part of a structure. / /The consistency checker may complain that this frame in not connected to other objects in the database. /This is OK. / /DO NOT DELETE THIS FRAME! // UNIQUE-ID - Protein-C TYPES - Polypeptides COMMON-NAME - a protein C COMMENT - Protein C is a major physiological anticoagulant. It is a vitamin K-dependent serine protease enzyme (|FRAME: 3.4.21.69-RXN "EC 3.4.21.69"|) that is activated by |FRAME: Thrombins "thrombin"| into activated protein C. / /The activated form (with protein S and phospholipid as a cofactor) degrades |FRAME: Factor-Va "factor Va"| and |FRAME: Factor-VIIIa "factor VIIIa"|. // UNIQUE-ID - protein-L-glutamate-O4-methyl-ester TYPES - Polypeptides COMMON-NAME - a protein-L-glutamate--O5-methyl-ester SYNONYMS - MCP-L-glutamate-O4-methyl-ester SYNONYMS - protein-L-glutamate methyl-ester // UNIQUE-ID - Protein-N5-alkylglutamines TYPES - Polypeptides COMMON-NAME - a protein-N5-alkylglutamine // UNIQUE-ID - Prothrombins TYPES - Polypeptides COMMON-NAME - a prothrombin // UNIQUE-ID - Quino-Proteins TYPES - Polypeptides COMMON-NAME - a quino-protein // UNIQUE-ID - Reduced-Putidaredoxins TYPES - Polypeptides COMMON-NAME - a reduced putidaredoxin COMMENT - Putidaredoxin (Pdx) is a 106-residue (11.6 kDa) ferredoxin that is produced in |FRAME: TAX-303| strains. It contains a |FRAME: CPD-6| and carries electrons from the flavoprotein putidaredoxin reductase (PdR) to the acceptor cytochrome CYP101, also known as P450cam because it catalyzes camphor hydroxylation. This NADH-supplied electron-transfer chain is one of the best studied of the P450 systems. The structure of Pdx was determined by NMR methods |CITS: [8204575]|. The electronic properties and redox interactions of Pdx have been extensively studied |CITS: [1445875][8845752][8663375][9268300][10433692]|. /Pdx carries one electron at a time, such that the two irons switch between [Fe3+, Fe3+] (oxidized) and [Fe2+, Fe3+] (reduced) states |CITS: [15103126]|. // UNIQUE-ID - Renin-2-Precursors TYPES - Polypeptides COMMON-NAME - a renin-2 precursor // UNIQUE-ID - Ribosomal-Protein-L-Alanines TYPES - Polypeptides COMMON-NAME - a ribosomal protein-L-alanine COMMENT - This compound class stands for generic and unspecified ribosomal-protein L-alanines. SYNONYMS - a ribosomal-protein L-alanine SYNONYMS - ribosomal-protein L-alanine // UNIQUE-ID - Ribosomal-Protein-L11s TYPES - Polypeptides COMMON-NAME - a ribosomal protein L11 // UNIQUE-ID - Ribosomal-Protein-N-Acetyl-L-Alanines TYPES - Polypeptides COMMON-NAME - a ribosomal protein-N-acetyl-L-alanine COMMENT - This compound class stands for generic and unspecified ribosomal-protein N-acetyl-L-alanines. SYNONYMS - a ribosomal-protein N-acetyl-L-alanine SYNONYMS - ribosomal-protein N-acetyl-L-alanine // UNIQUE-ID - Rubredoxins TYPES - Polypeptides COMMON-NAME - a rubredoxin COMMENT - Rubredoxins are a class of low-molecular-weight iron-containing proteins found in some bacteria and /archaea that participate in electron transfer. /Unlike traditional iron-sulfur proteins, rubredoxins do not contain inorganic sulfide. // UNIQUE-ID - SpoIVB-peptidase-precursors TYPES - Polypeptides COMMON-NAME - a SpoIVB peptidase Precursor // UNIQUE-ID - Sulfur-Carrier-Proteins-ThiI TYPES - Polypeptides COMMON-NAME - a ThiI sulfur-carrier protein // UNIQUE-ID - SUMO-propeptides TYPES - Polypeptides COMMON-NAME - a small ubiquitin-like modifier (SUMO) propeptide // UNIQUE-ID - Tau-proteins TYPES - Polypeptides COMMON-NAME - a tau protein // UNIQUE-ID - ThiF-Proteins TYPES - Polypeptides COMMON-NAME - a ThiF protein // UNIQUE-ID - Thioredoxin TYPES - Polypeptides COMMON-NAME - a thioredoxin COMMENT - Thioredoxin is a small electron-transfer protein which contains a cysteine /disulfide/dithiol active site. The protein functions in a wide variety of cellular /processes. Thioredoxin is reduced by NADPH in a reaction catalyzed by /thioredoxin reductase. The conversion between the oxidized and reduced /forms results in a change of conformation. The functional properties differ /between the two forms of thioredoxin. The reduced thioredoxin is a powerful /protein disulfide reductase, thioredoxin catalyzes dithiol-disulfide exchange /reactions. The oxidized form of thioredoxin has been crystallized, /the reduced form has been solved by NMR. |CITS: [3896121] [3152490] /[2187529] [2193685] [8098620] [2181145]| SYNONYMS - TRX A // UNIQUE-ID - TNF-alpha TYPES - Polypeptides COMMON-NAME - TNF-α SYNONYMS - tumor necrosis factor α // UNIQUE-ID - Tropomyocins TYPES - Polypeptides COMMON-NAME - a tropomyocin // UNIQUE-ID - Type-1-transmemberane-domains TYPES - Polypeptides COMMON-NAME - type-1 transmemberane domains // UNIQUE-ID - Tyrosine-3-monooxygenases TYPES - Polypeptides COMMON-NAME - [tyrosine-3-monooxygenase] // UNIQUE-ID - ubiquitin-activating-enzyme-E1 TYPES - Polypeptides COMMON-NAME - ubiquitin-activating enzyme E1 // UNIQUE-ID - ubiquitin-conjugating-enzyme-E2 TYPES - Polypeptides COMMON-NAME - ubiquitin-conjugating enzyme E2 // UNIQUE-ID - UBIQUITINN-CALMODULIN TYPES - Polypeptides COMMON-NAME - a ubiquitinated calmodulin SYNONYMS - a (ubiquitin)n-calmodulin // UNIQUE-ID - Ubiquitins TYPES - Polypeptides COMMON-NAME - a ubiquitin COMMENT - Ubiquitin is a small, highly-conserved regulatory protein that is ubiquitously expressed in eukaryotes. /Many proteins are modified post-translationally by the covalent attachment of one or more ubiquitin monomers, aprocess known as ubiquitination. / /Ubiquination has many functions, including the labeling of proteins for proteasomal degradation. // UNIQUE-ID - vacuolar-ATP-synthase-V0-subcomplex-subu TYPES - Polypeptides COMMON-NAME - vacuolar ATPase V0 subcomplex, subunit a // UNIQUE-ID - vacuolar-ATPase-V1-subcomplex-subunit-B TYPES - Polypeptides COMMON-NAME - vacuolar ATPase V1 subcomplex, subunit B // UNIQUE-ID - vacuolar-ATPase-V1-subcomplex-subunit-C TYPES - Polypeptides COMMON-NAME - vacuolar ATPase V1 subcomplex, subunit C // UNIQUE-ID - vacuolar-ATPase-V1-subcomplex-subunit-E TYPES - Polypeptides COMMON-NAME - vacuolar ATPase V1 subcomplex, subunit E // UNIQUE-ID - vacuolar-ATPase-V1-subcomplex-subunit-G TYPES - Polypeptides COMMON-NAME - vacuolar ATPase V1 subcomplex, subunit G // UNIQUE-ID - VibB TYPES - Polypeptides COMMON-NAME - a VibB aryl-carrier protein COMMENT - VibB is a |FRAME: TAX-666| enzyme that contains an aryl-carrier protein (ArCP) domain. In addition to catalyzing an isochorismatase reaction, it also bind a |FRAME: 2-3-DIHYDROXYBENZOATE| molecule on the ArCP domain, where it is condensed with norspermidine in a peptide-bond formation reaction catalyzed by VibH |CITS: [11112538]|. // UNIQUE-ID - VibF TYPES - Polypeptides COMMON-NAME - a NRPS VibF COMMENT - This class stands for the nonribosomal peptide synthetase VibF, a part of the vibriobactin synthetase complex, a |FRAME: TAX-666| enzyme involved in the synthesis of the siderophore |FRAME: CPD-2002|. // UNIQUE-ID - Von-Willebrand-Factor TYPES - Polypeptides COMMON-NAME - a von willebrand factor // UNIQUE-ID - Phosphorylated-receptor-proteins TYPES - Receptor-proteins COMMON-NAME - a phosphorylated receptor protein SYNONYMS - [receptor-protein] phosphate // UNIQUE-ID - EV-EXP-IDA-PART-PURIFIED-PROTEIN-HH TYPES - EV-EXP-IDA-PART-PURIFIED-PROTEIN COMMON-NAME - Assay of protein partially-purified from a heterlogous host COMMENT - Direct assay of protein partially purified from a heterologous /host. Recombinant protein partially purified /from a heterologous host expressing cloned gene(s), and activity /measured using an in vitro assay. // UNIQUE-ID - EV-EXP-IDA-PART-PURIFIED-PROTEIN-NH TYPES - EV-EXP-IDA-PART-PURIFIED-PROTEIN COMMON-NAME - Assay of protein partially-purified from its native host COMMENT - Direct assay of protein partially purified from its native /host. Protein partially purified from its /native host, and activity measured using an in vitro assay. // UNIQUE-ID - EV-EXP-IDA-PURIFIED-PROTEIN-HH TYPES - EV-EXP-IDA-PURIFIED-PROTEIN COMMON-NAME - Assay of protein purified to homogeneity from a heterlogous host COMMENT - Direct assay of protein purified from a heterologous host. Recombinant /protein purified to homogeneity from a heterologous host expressing /cloned gene(s), and activity measured using an in vitro assay. // UNIQUE-ID - EV-EXP-IDA-PURIFIED-PROTEIN-NH TYPES - EV-EXP-IDA-PURIFIED-PROTEIN COMMON-NAME - Assay of protein purified to homogeneity from its native host COMMENT - Direct assay of protein purified from its native host. Protein /purified to homogeneity from its native host, and activity measured /using an in vitro assay. // UNIQUE-ID - EV-EXP-IDA-UNPURIFIED-PROTEIN-HH TYPES - EV-EXP-IDA-UNPURIFIED-PROTEIN COMMON-NAME - Assay of unpurified protein expressed in a heterlogous host COMMENT - Direct assay of unpurified protein from a heterologous host. Presence /of a newly acquired protein activity is indicated by an assay /performed on a heterologous host expressing recombinant /protein(s). The recombinant proteins have not been purified. // UNIQUE-ID - EV-EXP-IDA-UNPURIFIED-PROTEIN-NH TYPES - EV-EXP-IDA-UNPURIFIED-PROTEIN COMMON-NAME - Assay of unpurified protein expressed in its native host COMMENT - Direct assay of unpurified protein from its native host. Presence of a /protein activity is indicated by an assay performed with an organism, /but the precise identity of the protein responsible for that activity /is not established, since the protein has not been purified. // UNIQUE-ID - GO:0001609 TYPES - GO:0045028 COMMON-NAME - adenosine receptor activity, G-protein coupled SYNONYMS - adenosine nucleotide receptor SYNONYMS - adenosine receptor activity, G protein coupled SYNONYMS - G protein coupled adenosine receptor activity SYNONYMS - G-protein-coupled adenosine receptor activity // UNIQUE-ID - GO:0015065 TYPES - GO:0045028 COMMON-NAME - uridine nucleotide receptor activity SYNONYMS - purinoceptor type U // UNIQUE-ID - GO:0004955 TYPES - GO:0004954 COMMON-NAME - prostaglandin receptor activity // UNIQUE-ID - GO:0004960 TYPES - GO:0004954 COMMON-NAME - thromboxane receptor activity SYNONYMS - TXA receptor activity // UNIQUE-ID - GO:0004936 TYPES - GO:0004935 COMMON-NAME - alpha-adrenergic receptor activity SYNONYMS - alpha adrenoceptor // UNIQUE-ID - GO:0004939 TYPES - GO:0004935 COMMON-NAME - beta-adrenergic receptor activity SYNONYMS - beta adrenoceptor // UNIQUE-ID - GO:0001588 TYPES - GO:0004952 COMMON-NAME - dopamine D1 receptor-like receptor activity // UNIQUE-ID - GO:0001591 TYPES - GO:0004952 COMMON-NAME - dopamine D2 receptor-like receptor activity // UNIQUE-ID - GO:0001596 TYPES - GO:0001595 COMMON-NAME - angiotensin type I receptor activity // UNIQUE-ID - GO:0004945 TYPES - GO:0001595 COMMON-NAME - angiotensin type II receptor activity // UNIQUE-ID - GO:0004990 TYPES - GO:0001603 COMMON-NAME - oxytocin receptor activity // UNIQUE-ID - GO:0005000 TYPES - GO:0001603 COMMON-NAME - vasopressin receptor activity // UNIQUE-ID - GO:0004950 TYPES - GO:0001637 TYPES - GO:0019956 COMMON-NAME - chemokine receptor activity // UNIQUE-ID - GO:0004943 TYPES - GO:0004942 COMMON-NAME - C3a anaphylatoxin receptor activity // UNIQUE-ID - GO:0004944 TYPES - GO:0004942 COMMON-NAME - C5a anaphylatoxin receptor activity // UNIQUE-ID - GO:0001600 TYPES - GO:0004962 COMMON-NAME - endothelin-B receptor activity // UNIQUE-ID - GO:0004978 TYPES - GO:0004977 TYPES - GO:0008188 TYPES - GO:0042562 COMMON-NAME - adrenocorticotropin receptor activity SYNONYMS - ACTH receptor activity SYNONYMS - adrenocorticotropic hormone receptor activity // UNIQUE-ID - GO:0004980 TYPES - GO:0004977 TYPES - GO:0042562 COMMON-NAME - melanocyte stimulating hormone receptor activity SYNONYMS - melanophore stimulating hormone receptor activity SYNONYMS - MSH receptor activity SYNONYMS - MSHR activity // UNIQUE-ID - GO:0004986 TYPES - GO:0004985 COMMON-NAME - delta-opioid receptor activity // UNIQUE-ID - GO:0004987 TYPES - GO:0004985 COMMON-NAME - kappa-opioid receptor activity // UNIQUE-ID - GO:0004988 TYPES - GO:0004985 COMMON-NAME - mu-opioid receptor activity // UNIQUE-ID - GO:0015051 TYPES - GO:0004985 COMMON-NAME - X-opioid receptor activity // UNIQUE-ID - GO:0001607 TYPES - GO:0008188 TYPES - GO:0042924 COMMON-NAME - neuromedin U receptor activity SYNONYMS - NMUR activity // UNIQUE-ID - GO:0004946 TYPES - GO:0008188 COMMON-NAME - bombesin receptor activity // UNIQUE-ID - GO:0004951 TYPES - GO:0008188 COMMON-NAME - cholecystokinin receptor activity // UNIQUE-ID - GO:0004966 TYPES - GO:0008188 COMMON-NAME - galanin receptor activity // UNIQUE-ID - GO:0004983 TYPES - GO:0008188 COMMON-NAME - neuropeptide Y receptor activity // UNIQUE-ID - GO:0004994 TYPES - GO:0008188 COMMON-NAME - somatostatin receptor activity // UNIQUE-ID - GO:0004995 TYPES - GO:0008188 COMMON-NAME - tachykinin receptor activity // UNIQUE-ID - GO:0016492 TYPES - GO:0008188 COMMON-NAME - neurotensin receptor activity, G-protein coupled SYNONYMS - G protein coupled neurotensin receptor activity SYNONYMS - G-protein coupled neurotensin receptor activity SYNONYMS - G-protein-coupled neurotensin receptor activity SYNONYMS - neurotensin receptor activity, G protein coupled // UNIQUE-ID - GO:0008569 TYPES - GO:0003777 COMMON-NAME - minus-end-directed microtubule motor activity SYNONYMS - kinesin ATP phosphohydrolase (minus-end-directed) SYNONYMS - minus-end-directed kinesin ATPase activity // UNIQUE-ID - GO:0004842 TYPES - GO:0008639 TYPES - GO:0019787 COMMON-NAME - ubiquitin-protein ligase activity SYNONYMS - E2 SYNONYMS - E3 SYNONYMS - ubiquitin activity SYNONYMS - ubiquitin conjugating enzyme activity SYNONYMS - ubiquitin ligase activity SYNONYMS - ubiquitin protein ligase activity SYNONYMS - ubiquitin protein-ligase activity SYNONYMS - ubiquitin-activating enzyme SYNONYMS - ubiquitin-conjugating enzyme activity SYNONYMS - ubiquitin-ligase activity SYNONYMS - ubiquitin:protein-lysine N-ligase (AMP-forming) activity // UNIQUE-ID - GO:0019949 TYPES - GO:0008639 COMMON-NAME - SUMO conjugating enzyme activity SYNONYMS - SMT3 conjugating enzyme // UNIQUE-ID - GO:0042296 TYPES - GO:0008639 COMMON-NAME - ISG15 conjugating enzyme activity // UNIQUE-ID - GO:0004839 TYPES - GO:0008641 COMMON-NAME - ubiquitin activating enzyme activity SYNONYMS - E1 // UNIQUE-ID - GO:0019781 TYPES - GO:0008641 COMMON-NAME - NEDD8 activating enzyme activity SYNONYMS - RUB1 activating enzyme activity // UNIQUE-ID - GO:0004016 TYPES - GO:0009975 TYPES - GO:0016849 COMMON-NAME - adenylate cyclase activity SYNONYMS - 3',5'-cyclic AMP synthetase activity SYNONYMS - adenyl cyclase activity SYNONYMS - adenylyl cyclase activity SYNONYMS - adenylylcyclase activity SYNONYMS - ATP diphosphate-lyase (cyclizing) activity SYNONYMS - ATP diphosphate-lyase (cyclizing; 3',5'-cyclic-AMP-forming) activity SYNONYMS - ATP pyrophosphate-lyase activity SYNONYMS - cAMP generating peptide activity // UNIQUE-ID - GO:0004497 TYPES - GO:0016491 COMMON-NAME - monooxygenase activity // UNIQUE-ID - GO:0015002 TYPES - GO:0016491 COMMON-NAME - heme-copper terminal oxidase activity SYNONYMS - haem-copper terminal oxidase activity // UNIQUE-ID - GO:0016229 TYPES - GO:0016491 COMMON-NAME - steroid dehydrogenase activity // UNIQUE-ID - GO:0016614 TYPES - GO:0016491 COMMON-NAME - oxidoreductase activity, acting on CH-OH group of donors COMMENT - Note that enzymes of class EC:1.1.99.- should also be annotated to this term. SYNONYMS - oxidoreductase activity, acting on the CH-OH group of donors, other acceptors // UNIQUE-ID - GO:0016627 TYPES - GO:0016491 COMMON-NAME - oxidoreductase activity, acting on the CH-CH group of donors COMMENT - Note that enzymes of class EC:1.3.99.- should also be annotated to this term. SYNONYMS - oxidoreductase activity, acting on the CH-CH group of donors, other acceptors // UNIQUE-ID - GO:0016638 TYPES - GO:0016491 COMMON-NAME - oxidoreductase activity, acting on the CH-NH2 group of donors COMMENT - Note that enzymes of class EC:1.4.99.- should also be annotated to this term. SYNONYMS - oxidoreductase activity, acting on the CH-NH2 group of donors, other acceptors // UNIQUE-ID - GO:0016645 TYPES - GO:0016491 COMMON-NAME - oxidoreductase activity, acting on the CH-NH group of donors COMMENT - Note that enzymes of class EC:1.5.99.- should also be annotated to this term. SYNONYMS - oxidoreductase activity, acting on the CH-NH group of donors, other acceptors // UNIQUE-ID - GO:0016651 TYPES - GO:0016491 COMMON-NAME - oxidoreductase activity, acting on NADH or NADPH COMMENT - Note that enzymes of class EC:1.6.99.- should also be annotated to this term. SYNONYMS - NAD(P)H dehydrogenase SYNONYMS - oxidoreductase activity, acting on NADH or NADPH, other acceptor // UNIQUE-ID - GO:0016667 TYPES - GO:0016491 COMMON-NAME - oxidoreductase activity, acting on sulfur group of donors COMMENT - Note that enzymes of class EC:1.8.99.- should also be annotated to this term. SYNONYMS - oxidoreductase activity, acting on sulfur group of donors, other acceptors SYNONYMS - oxidoreductase activity, acting on sulphur group of donors // UNIQUE-ID - GO:0016675 TYPES - GO:0016491 COMMON-NAME - oxidoreductase activity, acting on heme group of donors COMMENT - Note that enzymes of class EC:1.9.99.- should also be annotated to this term. SYNONYMS - oxidoreductase activity, acting on haem group of donors SYNONYMS - oxidoreductase activity, acting on heme group of donors, other acceptors // UNIQUE-ID - GO:0016679 TYPES - GO:0016491 COMMON-NAME - oxidoreductase activity, acting on diphenols and related substances as donors COMMENT - Note that enzymes of class EC:1.10.99.- should also be annotated to this term. SYNONYMS - oxidoreductase activity, acting on diphenols and related substances as donors, other acceptors // UNIQUE-ID - GO:0016684 TYPES - GO:0016491 COMMON-NAME - oxidoreductase activity, acting on peroxide as acceptor // UNIQUE-ID - GO:0016701 TYPES - GO:0016491 COMMON-NAME - oxidoreductase activity, acting on single donors with incorporation of molecular oxygen COMMENT - Note that enzymes of class EC:1.13.99.- should also be annotated to this term. SYNONYMS - oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, miscellaneous SYNONYMS - oxygenase // UNIQUE-ID - GO:0016705 TYPES - GO:0016491 COMMON-NAME - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen COMMENT - Note that enzymes of class EC:1.14.99.- should also be annotated to this term. SYNONYMS - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, miscellaneous // UNIQUE-ID - GO:0016721 TYPES - GO:0016491 COMMON-NAME - oxidoreductase activity, acting on superoxide radicals as acceptor // UNIQUE-ID - GO:0016725 TYPES - GO:0016491 COMMON-NAME - oxidoreductase activity, acting on CH or CH2 groups COMMENT - Note that enzymes of class EC:1.17.99.- should also be annotated to this term. SYNONYMS - oxidoreductase activity, acting on CH2 groups, other acceptors // UNIQUE-ID - GO:0016903 TYPES - GO:0016491 COMMON-NAME - oxidoreductase activity, acting on the aldehyde or oxo group of donors COMMENT - Note that enzymes of class EC:1.2.99.- should also be annotated to this term. SYNONYMS - oxidoreductase activity, acting on the aldehyde or oxo group of donors, other acceptors // UNIQUE-ID - GO:0030343 TYPES - GO:0016491 COMMON-NAME - vitamin D3 25-hydroxylase activity SYNONYMS - cholecalciferol 25-hydroxylase activity // UNIQUE-ID - GO:0030611 TYPES - GO:0016491 COMMON-NAME - arsenate reductase activity // UNIQUE-ID - GO:0048244 TYPES - GO:0016491 COMMON-NAME - phytanoyl-CoA dioxygenase activity SYNONYMS - phytanoyl-CoA 2 oxoglutarate dioxygenase activity SYNONYMS - phytanoyl-CoA 2-hydroxylase activity SYNONYMS - phytanoyl-CoA alpha-hydroxylase activity SYNONYMS - phytanoyl-CoA hydroxylase activity SYNONYMS - phytanoyl-CoA, 2-oxoglutarate:oxygen oxidoreductase (2-hydroxylating) // UNIQUE-ID - GO:0051213 TYPES - GO:0016491 COMMON-NAME - dioxygenase activity // UNIQUE-ID - GO:0008398 TYPES - GO:0032451 TYPES - GO:0016709 COMMON-NAME - sterol 14-demethylase activity SYNONYMS - lanosterol 14-alpha-demethylase SYNONYMS - cytochrome P450 CYP51 // UNIQUE-ID - GO:0004096 TYPES - GO:0004601 COMMON-NAME - catalase activity SYNONYMS - catalase reaction SYNONYMS - bacterial catalase-peroxidase activity SYNONYMS - haem catalase activity SYNONYMS - heme catalase activity SYNONYMS - manganese catalase activity // UNIQUE-ID - GO:0004602 TYPES - GO:0004601 COMMON-NAME - glutathione peroxidase activity SYNONYMS - glutathione:hydrogen-peroxide oxidoreductase activity SYNONYMS - GSH peroxidase activity SYNONYMS - non-selenium glutathione peroxidase activity SYNONYMS - reduced glutathione peroxidase activity SYNONYMS - selenium-glutathione peroxidase activity // UNIQUE-ID - GO:0047066 TYPES - GO:0004601 COMMON-NAME - phospholipid-hydroperoxide glutathione peroxidase activity SYNONYMS - glutathione:lipid-hydroperoxide oxidoreductase activity SYNONYMS - hydroperoxide glutathione peroxidase activity SYNONYMS - peroxidation-inhibiting protein activity SYNONYMS - peroxidation-inhibiting protein: peroxidase, glutathione (phospholipid hydroperoxide-reducing) SYNONYMS - PHGPX SYNONYMS - phospholipid hydroperoxide glutathione peroxidase activity // UNIQUE-ID - GO:0051920 TYPES - GO:0004601 COMMON-NAME - peroxiredoxin activity SYNONYMS - AhpC activity SYNONYMS - alkyl hydroperoxide reductase C22 activity SYNONYMS - PRDX activity SYNONYMS - Prx activity SYNONYMS - thiol-containing-reductant:hydroperoxide oxidoreductase activity // UNIQUE-ID - GO:0016741 TYPES - GO:0016740 COMMON-NAME - transferase activity, transferring one-carbon groups // UNIQUE-ID - GO:0016744 TYPES - GO:0016740 COMMON-NAME - transferase activity, transferring aldehyde or ketonic groups SYNONYMS - transketolase or transaldolase activity // UNIQUE-ID - GO:0016746 TYPES - GO:0016740 COMMON-NAME - transferase activity, transferring acyl groups // UNIQUE-ID - GO:0016757 TYPES - GO:0016740 COMMON-NAME - transferase activity, transferring glycosyl groups COMMENT - Note that enzymes of class EC:2.4.99.- should also be annotated to this term. SYNONYMS - glycosyltransferase activity SYNONYMS - transferase activity, transferring other glycosyl groups SYNONYMS - transglycosylase activity // UNIQUE-ID - GO:0016765 TYPES - GO:0016740 COMMON-NAME - transferase activity, transferring alkyl or aryl (other than methyl) groups SYNONYMS - transferase activity, transferring alkyl or aryl groups, other than methyl groups // UNIQUE-ID - GO:0016769 TYPES - GO:0016740 COMMON-NAME - transferase activity, transferring nitrogenous groups COMMENT - Note that enzymes of class EC:2.6.99.- should also be annotated to this term. SYNONYMS - transferase activity, transferring other nitrogenous groups // UNIQUE-ID - GO:0016772 TYPES - GO:0016740 COMMON-NAME - transferase activity, transferring phosphorus-containing groups COMMENT - Note that this term encompasses all kinase activities, as well as activities that transfer other phosphorus-containing groups such as diphosphate or nucleotides. // UNIQUE-ID - GO:0016782 TYPES - GO:0016740 COMMON-NAME - transferase activity, transferring sulfur-containing groups SYNONYMS - transferase activity, transferring sulphur-containing groups // UNIQUE-ID - GO:0016992 TYPES - GO:0016783 TYPES - GO:0016979 TYPES - GO:0070283 COMMON-NAME - lipoate synthase activity SYNONYMS - LipA SYNONYMS - lipoyl synthase activity SYNONYMS - LS SYNONYMS - protein 6-N-(octanoyl)lysine:sulfur sulfurtransferase activity SYNONYMS - protein N6-(octanoyl)lysine:sulfur sulfurtransferase activity // UNIQUE-ID - GO:0008233 TYPES - GO:0016787 COMMON-NAME - peptidase activity SYNONYMS - hydrolase, acting on peptide bonds SYNONYMS - peptide hydrolase SYNONYMS - protease // UNIQUE-ID - GO:0016788 TYPES - GO:0016787 COMMON-NAME - hydrolase activity, acting on ester bonds SYNONYMS - esterase // UNIQUE-ID - GO:0016798 TYPES - GO:0016787 COMMON-NAME - hydrolase activity, acting on glycosyl bonds SYNONYMS - glycosylase SYNONYMS - N-glycosylase // UNIQUE-ID - GO:0016801 TYPES - GO:0016787 COMMON-NAME - hydrolase activity, acting on ether bonds // UNIQUE-ID - GO:0016810 TYPES - GO:0016787 COMMON-NAME - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds COMMENT - Note that enzymes of class EC:3.5.99.- should also be annotated to this term. SYNONYMS - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in other compounds // UNIQUE-ID - GO:0016817 TYPES - GO:0016787 COMMON-NAME - hydrolase activity, acting on acid anhydrides SYNONYMS - hydrolase activity, acting on acid anhydrides, involved in cellular and subcellular movement // UNIQUE-ID - GO:0016822 TYPES - GO:0016787 COMMON-NAME - hydrolase activity, acting on acid carbon-carbon bonds // UNIQUE-ID - GO:0016826 TYPES - GO:0016787 COMMON-NAME - hydrolase activity, acting on acid sulfur-nitrogen bonds SYNONYMS - hydrolase activity, acting on acid sulphur-nitrogen bonds // UNIQUE-ID - GO:0017171 TYPES - GO:0016787 COMMON-NAME - serine hydrolase activity // UNIQUE-ID - GO:0019213 TYPES - GO:0016787 COMMON-NAME - deacetylase activity // UNIQUE-ID - GO:0051747 TYPES - GO:0016787 TYPES - GO:0032451 COMMON-NAME - DNA demethylase activity // UNIQUE-ID - GO:0004000 TYPES - GO:0016814 TYPES - GO:0019239 COMMON-NAME - adenosine deaminase activity SYNONYMS - adenosine aminohydrolase activity SYNONYMS - adenosine deaminase reaction // UNIQUE-ID - GO:0004132 TYPES - GO:0016814 TYPES - GO:0019239 COMMON-NAME - dCMP deaminase activity SYNONYMS - dCMP aminohydrolase activity SYNONYMS - deoxy-CMP-deaminase activity SYNONYMS - deoxycytidine monophosphate deaminase activity SYNONYMS - deoxycytidine-5'-monophosphate aminohydrolase activity SYNONYMS - deoxycytidine-5'-phosphate deaminase activity SYNONYMS - deoxycytidylate aminohydrolase activity SYNONYMS - deoxycytidylate deaminase activity // UNIQUE-ID - GO:0008892 TYPES - GO:0016814 TYPES - GO:0019239 COMMON-NAME - guanine deaminase activity SYNONYMS - GAH activity SYNONYMS - guanase activity SYNONYMS - guanine aminase activity SYNONYMS - guanine aminohydrolase activity // UNIQUE-ID - GO:0016820 TYPES - GO:0016817 TYPES - GO:0022857 COMMON-NAME - hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances // UNIQUE-ID - GO:0008559 TYPES - GO:0015239 TYPES - GO:0042626 TYPES - GO:0042910 COMMON-NAME - xenobiotic-transporting ATPase activity COMMENT - Consider also annotating to the molecular function term 'ATP binding ; GO:0005524'. SYNONYMS - ATP phosphohydrolase (steroid-exporting) SYNONYMS - ATP phosphohydrolase (xenobiotic-exporting) SYNONYMS - MDR protein SYNONYMS - multidrug resistance exporter SYNONYMS - multidrug-resistance protein SYNONYMS - P-glycoprotein SYNONYMS - PDR protein SYNONYMS - pleiotropic-drug-resistance protein SYNONYMS - steroid ABC transporter SYNONYMS - steroid-transporting ATPase activity SYNONYMS - xenobiotic ABC transporter // UNIQUE-ID - GO:0016830 TYPES - GO:0016829 COMMON-NAME - carbon-carbon lyase activity COMMENT - Note that enzymes of class EC:4.1.99.- should also be annotated to this term. SYNONYMS - other carbon-carbon lyase activity // UNIQUE-ID - GO:0016835 TYPES - GO:0016829 COMMON-NAME - carbon-oxygen lyase activity COMMENT - Note that enzymes of class EC:4.2.99.- should also be annotated to this term. SYNONYMS - other carbon-oxygen lyase activity // UNIQUE-ID - GO:0016840 TYPES - GO:0016829 COMMON-NAME - carbon-nitrogen lyase activity COMMENT - Note that enzymes of class EC:4.3.99.- should also be annotated to this term. SYNONYMS - other carbon-nitrogen lyase activity // UNIQUE-ID - GO:0016846 TYPES - GO:0016829 COMMON-NAME - carbon-sulfur lyase activity SYNONYMS - carbon-sulphur lyase activity // UNIQUE-ID - GO:0016849 TYPES - GO:0016829 COMMON-NAME - phosphorus-oxygen lyase activity // UNIQUE-ID - GO:0030412 TYPES - GO:0016841 TYPES - GO:0019239 COMMON-NAME - formimidoyltetrahydrofolate cyclodeaminase activity SYNONYMS - 5-formimidoyltetrahydrofolate ammonia-lyase (cyclizing) SYNONYMS - 5-formimidoyltetrahydrofolate ammonia-lyase (cyclizing; 5,10-methenyltetrahydrofolate-forming) SYNONYMS - formiminotetrahydrofolate cyclodeaminase activity // UNIQUE-ID - GO:0003916 TYPES - GO:0003677 TYPES - GO:0016853 COMMON-NAME - DNA topoisomerase activity SYNONYMS - DNA supercoiling activity // UNIQUE-ID - GO:0016854 TYPES - GO:0016853 COMMON-NAME - racemase and epimerase activity COMMENT - Note that enzymes of class EC:5.1.99.- should also be annotated to this term. Note that 'epimerase' refers to the conversion of an epimer into its diastereoisomer, and 'racemase' refers to the interconversion of the two enantiomers of a chiral compound. SYNONYMS - racemase and epimerase activity, acting on other compounds // UNIQUE-ID - GO:0016859 TYPES - GO:0016853 COMMON-NAME - cis-trans isomerase activity // UNIQUE-ID - GO:0016860 TYPES - GO:0016853 COMMON-NAME - intramolecular oxidoreductase activity COMMENT - Note that enzymes of class EC:5.3.99.- should also be annotated to this term. SYNONYMS - intramolecular isomerase activity SYNONYMS - intramolecular oxidoreductase activity, other intramolecular oxidoreductases // UNIQUE-ID - GO:0016866 TYPES - GO:0016853 COMMON-NAME - intramolecular transferase activity COMMENT - Note that enzymes of class EC:5.4.99.- should also be annotated to this term. SYNONYMS - mutase SYNONYMS - intramolecular transferase activity, transferring other groups // UNIQUE-ID - GO:0016875 TYPES - GO:0016874 COMMON-NAME - ligase activity, forming carbon-oxygen bonds // UNIQUE-ID - GO:0016877 TYPES - GO:0016874 COMMON-NAME - ligase activity, forming carbon-sulfur bonds SYNONYMS - ligase activity, forming carbon-sulphur bonds // UNIQUE-ID - GO:0016879 TYPES - GO:0016874 COMMON-NAME - ligase activity, forming carbon-nitrogen bonds COMMENT - Note that enzymes of class EC:6.3.4.- should also be annotated to this term. SYNONYMS - other carbon-nitrogen ligase activity // UNIQUE-ID - GO:0016885 TYPES - GO:0016874 COMMON-NAME - ligase activity, forming carbon-carbon bonds // UNIQUE-ID - GO:0016886 TYPES - GO:0016874 COMMON-NAME - ligase activity, forming phosphoric ester bonds // UNIQUE-ID - GO:0030020 TYPES - GO:0005201 COMMON-NAME - extracellular matrix structural constituent conferring tensile strength // UNIQUE-ID - GO:0030021 TYPES - GO:0005201 COMMON-NAME - extracellular matrix structural constituent conferring compression resistance // UNIQUE-ID - GO:0030023 TYPES - GO:0005201 COMMON-NAME - extracellular matrix constituent conferring elasticity SYNONYMS - elastin // UNIQUE-ID - GO:0005328 TYPES - GO:0005326 TYPES - GO:0015370 COMMON-NAME - neurotransmitter:sodium symporter activity SYNONYMS - sodium/neurotransmitter symporter // UNIQUE-ID - GO:0005329 TYPES - GO:0005275 TYPES - GO:0015238 COMMON-NAME - dopamine transmembrane transporter activity // UNIQUE-ID - GO:0015239 TYPES - GO:0015238 COMMON-NAME - multidrug transporter activity // UNIQUE-ID - GO:0015307 TYPES - GO:0015238 TYPES - GO:0015299 COMMON-NAME - drug:hydrogen antiporter activity SYNONYMS - carbonyl cyanide m-chlorophenylhydrazone/nalidixic acid/organomercurials:hydrogen antiporter activity SYNONYMS - drug:proton antiporter // UNIQUE-ID - GO:0042895 TYPES - GO:0015238 COMMON-NAME - antibiotic transporter activity // UNIQUE-ID - GO:0017077 TYPES - GO:0022857 COMMON-NAME - oxidative phosphorylation uncoupler activity SYNONYMS - mitochondrial uncoupling protein activity SYNONYMS - uncoupling protein activity // UNIQUE-ID - GO:0022803 TYPES - GO:0022857 COMMON-NAME - passive transmembrane transporter activity // UNIQUE-ID - GO:0022804 TYPES - GO:0022857 COMMON-NAME - active transmembrane transporter activity SYNONYMS - active carrier activity SYNONYMS - carrier activity SYNONYMS - permease activity SYNONYMS - pump activity // UNIQUE-ID - GO:0022891 TYPES - GO:0022857 TYPES - GO:0022892 COMMON-NAME - substrate-specific transmembrane transporter activity // UNIQUE-ID - GO:0008320 TYPES - GO:0005515 TYPES - GO:0008565 TYPES - GO:0022891 COMMON-NAME - protein transmembrane transporter activity // UNIQUE-ID - GO:0015234 TYPES - GO:0022891 TYPES - GO:0051183 COMMON-NAME - thiamin transmembrane transporter activity SYNONYMS - thiamin permease activity SYNONYMS - thiamine permease activity SYNONYMS - thiamine transmembrane transporter activity SYNONYMS - vitamin B1 transporter activity // UNIQUE-ID - GO:0005319 TYPES - GO:0022892 COMMON-NAME - lipid transporter activity SYNONYMS - apolipoprotein SYNONYMS - high-density lipoprotein SYNONYMS - lipophorin SYNONYMS - low-density lipoprotein SYNONYMS - very-low-density lipoprotein // UNIQUE-ID - GO:0005372 TYPES - GO:0022892 COMMON-NAME - water transporter activity // UNIQUE-ID - GO:0008565 TYPES - GO:0022892 COMMON-NAME - protein transporter activity SYNONYMS - enzyme transporter activity SYNONYMS - holin SYNONYMS - protein carrier activity SYNONYMS - secretin (sensu Bacteria) // UNIQUE-ID - GO:0015197 TYPES - GO:0022892 COMMON-NAME - peptide transporter activity SYNONYMS - peptide uptake permease activity // UNIQUE-ID - GO:0042887 TYPES - GO:0022892 COMMON-NAME - amide transporter activity SYNONYMS - amine/amide/polyamine channel activity // UNIQUE-ID - GO:0008517 TYPES - GO:0051183 TYPES - GO:0051184 COMMON-NAME - folic acid transporter activity SYNONYMS - folate transporter activity SYNONYMS - vitamin B9 transporter activity SYNONYMS - vitamin M transporter activity // UNIQUE-ID - GO:0015226 TYPES - GO:0051183 TYPES - GO:0051184 COMMON-NAME - carnitine transporter activity SYNONYMS - vitamin Bt transporter activity // UNIQUE-ID - GO:0005308 TYPES - GO:0051184 COMMON-NAME - creatine transporter activity // UNIQUE-ID - GO:0008327 TYPES - GO:0000166 TYPES - GO:0043565 COMMON-NAME - methyl-CpG binding // UNIQUE-ID - GO:0010181 TYPES - GO:0000166 TYPES - GO:0050662 COMMON-NAME - FMN binding SYNONYMS - flavin mononucleotide binding // UNIQUE-ID - GO:0017076 TYPES - GO:0000166 COMMON-NAME - purine nucleotide binding // UNIQUE-ID - GO:0019103 TYPES - GO:0000166 COMMON-NAME - pyrimidine nucleotide binding // UNIQUE-ID - GO:0030551 TYPES - GO:0000166 COMMON-NAME - cyclic nucleotide binding // UNIQUE-ID - GO:0032553 TYPES - GO:0000166 COMMON-NAME - ribonucleotide binding // UNIQUE-ID - GO:0050661 TYPES - GO:0050662 TYPES - GO:0000166 COMMON-NAME - NADP or NADPH binding SYNONYMS - NADP (oxidized) binding SYNONYMS - NADP (reduced) binding SYNONYMS - NADPH binding SYNONYMS - nicotinamide adenine dinucleotide phosphate binding SYNONYMS - oxidized NADP binding SYNONYMS - oxidized nicotinamide adenine dinucleotide phosphate binding SYNONYMS - reduced NADP binding SYNONYMS - reduced nicotinamide adenine dinucleotide phosphate binding // UNIQUE-ID - GO:0051287 TYPES - GO:0050662 TYPES - GO:0000166 COMMON-NAME - NAD or NADH binding SYNONYMS - NAD (oxidized) binding SYNONYMS - NAD (reduced) binding SYNONYMS - NADH binding SYNONYMS - nicotinamide adenine dinucleotide binding SYNONYMS - oxidized NAD binding SYNONYMS - oxidized nicotinamide adenine dinucleotide binding SYNONYMS - reduced NAD binding SYNONYMS - reduced nicotinamide adenine dinucleotide binding // UNIQUE-ID - GO:0030247 TYPES - GO:0001871 TYPES - GO:0030246 COMMON-NAME - polysaccharide binding // UNIQUE-ID - GO:0042834 TYPES - GO:0001871 COMMON-NAME - peptidoglycan binding // UNIQUE-ID - GO:0001883 TYPES - GO:0001882 COMMON-NAME - purine nucleoside binding // UNIQUE-ID - GO:0003677 TYPES - GO:0003676 COMMON-NAME - DNA binding SYNONYMS - microtubule/chromatin interaction SYNONYMS - plasmid binding // UNIQUE-ID - GO:0003723 TYPES - GO:0003676 COMMON-NAME - RNA binding // UNIQUE-ID - GO:0003705 TYPES - GO:0003700 TYPES - GO:0003702 COMMON-NAME - RNA polymerase II transcription factor activity, enhancer binding // UNIQUE-ID - GO:0031490 TYPES - GO:0003682 TYPES - GO:0043566 COMMON-NAME - chromatin DNA binding // UNIQUE-ID - GO:0003743 TYPES - GO:0008135 COMMON-NAME - translation initiation factor activity // UNIQUE-ID - GO:0003746 TYPES - GO:0008135 COMMON-NAME - translation elongation factor activity // UNIQUE-ID - GO:0008079 TYPES - GO:0008135 COMMON-NAME - translation termination factor activity // UNIQUE-ID - GO:0008494 TYPES - GO:0008135 COMMON-NAME - translation activator activity // UNIQUE-ID - GO:0031491 TYPES - GO:0003682 COMMON-NAME - nucleosome binding // UNIQUE-ID - GO:0030882 TYPES - GO:0003823 TYPES - GO:0008289 COMMON-NAME - lipid antigen binding // UNIQUE-ID - GO:0042605 TYPES - GO:0003823 TYPES - GO:0042277 COMMON-NAME - peptide antigen binding COMMENT - Note that this term can be used to describe binding to the peptide expressed by an MHC molecule. // UNIQUE-ID - GO:0000149 TYPES - GO:0005515 COMMON-NAME - SNARE binding SYNONYMS - SNAP receptor binding // UNIQUE-ID - GO:0001848 TYPES - GO:0005515 COMMON-NAME - complement binding COMMENT - Note that the complement cascade includes all of the components involved in the classical complement pathway, the alternative complement pathway, and the lectin complement pathway, as well as the common components of all three pathways. // UNIQUE-ID - GO:0005049 TYPES - GO:0005515 COMMON-NAME - nuclear export signal receptor activity SYNONYMS - NES receptor // UNIQUE-ID - GO:0005102 TYPES - GO:0005515 COMMON-NAME - receptor binding SYNONYMS - adrenocorticotropin SYNONYMS - allatostatin SYNONYMS - insulin SYNONYMS - receptor ligand SYNONYMS - receptor-associated protein activity // UNIQUE-ID - GO:0005516 TYPES - GO:0005515 COMMON-NAME - calmodulin binding // UNIQUE-ID - GO:0005518 TYPES - GO:0005515 COMMON-NAME - collagen binding // UNIQUE-ID - GO:0005521 TYPES - GO:0005515 COMMON-NAME - lamin binding SYNONYMS - lamin/chromatin binding // UNIQUE-ID - GO:0005522 TYPES - GO:0005515 COMMON-NAME - profilin binding // UNIQUE-ID - GO:0008013 TYPES - GO:0005515 COMMON-NAME - beta-catenin binding // UNIQUE-ID - GO:0008022 TYPES - GO:0005515 COMMON-NAME - protein C-terminus binding SYNONYMS - C-terminal binding // UNIQUE-ID - GO:0008034 TYPES - GO:0005515 COMMON-NAME - lipoprotein binding // UNIQUE-ID - GO:0008092 TYPES - GO:0005515 COMMON-NAME - cytoskeletal protein binding // UNIQUE-ID - GO:0008134 TYPES - GO:0005515 COMMON-NAME - transcription factor binding SYNONYMS - TF binding // UNIQUE-ID - GO:0017025 TYPES - GO:0005515 COMMON-NAME - TATA-binding protein binding SYNONYMS - TBP binding // UNIQUE-ID - GO:0017147 TYPES - GO:0005515 COMMON-NAME - Wnt-protein binding // UNIQUE-ID - GO:0019838 TYPES - GO:0005515 COMMON-NAME - growth factor binding SYNONYMS - neurotrophin TRK receptor activity // UNIQUE-ID - GO:0019899 TYPES - GO:0005515 COMMON-NAME - enzyme binding // UNIQUE-ID - GO:0019904 TYPES - GO:0005515 COMMON-NAME - protein domain specific binding SYNONYMS - protein domain-specific binding // UNIQUE-ID - GO:0019955 TYPES - GO:0005515 COMMON-NAME - cytokine binding // UNIQUE-ID - GO:0030276 TYPES - GO:0005515 COMMON-NAME - clathrin binding // UNIQUE-ID - GO:0030332 TYPES - GO:0005515 COMMON-NAME - cyclin binding // UNIQUE-ID - GO:0030492 TYPES - GO:0005515 COMMON-NAME - hemoglobin binding SYNONYMS - globin binding SYNONYMS - haemoglobin binding // UNIQUE-ID - GO:0030674 TYPES - GO:0005515 COMMON-NAME - protein binding, bridging SYNONYMS - protein-protein adaptor // UNIQUE-ID - GO:0031072 TYPES - GO:0005515 COMMON-NAME - heat shock protein binding // UNIQUE-ID - GO:0031369 TYPES - GO:0005515 COMMON-NAME - translation initiation factor binding // UNIQUE-ID - GO:0032182 TYPES - GO:0005515 COMMON-NAME - small conjugating protein binding // UNIQUE-ID - GO:0032403 TYPES - GO:0005515 COMMON-NAME - protein complex binding // UNIQUE-ID - GO:0032947 TYPES - GO:0005515 COMMON-NAME - protein complex scaffold // UNIQUE-ID - GO:0034185 TYPES - GO:0005515 COMMON-NAME - apolipoprotein binding // UNIQUE-ID - GO:0042043 TYPES - GO:0005515 COMMON-NAME - neurexin binding SYNONYMS - neuroligin // UNIQUE-ID - GO:0042393 TYPES - GO:0005515 COMMON-NAME - histone binding SYNONYMS - histone-specific chaperone activity // UNIQUE-ID - GO:0042802 TYPES - GO:0005515 COMMON-NAME - identical protein binding SYNONYMS - protein homopolymerization // UNIQUE-ID - GO:0043236 TYPES - GO:0005515 TYPES - GO:0050840 COMMON-NAME - laminin binding // UNIQUE-ID - GO:0043495 TYPES - GO:0005515 COMMON-NAME - protein anchor SYNONYMS - anchoring // UNIQUE-ID - GO:0043560 TYPES - GO:0005515 COMMON-NAME - insulin receptor substrate binding SYNONYMS - insulin receptor substrate [protein] binding SYNONYMS - IRS [protein] binding SYNONYMS - IRS binding // UNIQUE-ID - GO:0043621 TYPES - GO:0005515 COMMON-NAME - protein self-association SYNONYMS - intramolecular protein binding SYNONYMS - protein self association SYNONYMS - protein self binding // UNIQUE-ID - GO:0045294 TYPES - GO:0005515 COMMON-NAME - alpha-catenin binding // UNIQUE-ID - GO:0045502 TYPES - GO:0005515 COMMON-NAME - dynein binding // UNIQUE-ID - GO:0045545 TYPES - GO:0005515 COMMON-NAME - syndecan binding // UNIQUE-ID - GO:0045569 TYPES - GO:0005515 COMMON-NAME - TRAIL binding SYNONYMS - Apo-2L binding // UNIQUE-ID - GO:0046332 TYPES - GO:0005515 COMMON-NAME - SMAD binding // UNIQUE-ID - GO:0046983 TYPES - GO:0005515 COMMON-NAME - protein dimerization activity // UNIQUE-ID - GO:0048185 TYPES - GO:0005515 COMMON-NAME - activin binding // UNIQUE-ID - GO:0050839 TYPES - GO:0005515 COMMON-NAME - cell adhesion molecule binding SYNONYMS - adhesive extracellular matrix constituent SYNONYMS - CAM binding SYNONYMS - cell adhesion molecule activity SYNONYMS - cell adhesion receptor activity // UNIQUE-ID - GO:0051082 TYPES - GO:0005515 COMMON-NAME - unfolded protein binding SYNONYMS - binding unfolded ER proteins SYNONYMS - chaperone activity SYNONYMS - fimbrium-specific chaperone activity SYNONYMS - glycoprotein-specific chaperone activity SYNONYMS - histone-specific chaperone activity SYNONYMS - ribosomal chaperone activity SYNONYMS - tubulin-specific chaperone activity // UNIQUE-ID - GO:0051087 TYPES - GO:0005515 COMMON-NAME - chaperone binding SYNONYMS - chaperone protein binding SYNONYMS - co-chaperone activity SYNONYMS - co-chaperonin activity // UNIQUE-ID - GO:0051219 TYPES - GO:0005515 COMMON-NAME - phosphoprotein binding SYNONYMS - phosphorylated protein binding // UNIQUE-ID - GO:0008093 TYPES - GO:0008092 TYPES - GO:0060090 COMMON-NAME - cytoskeletal adaptor activity // UNIQUE-ID - GO:0003713 TYPES - GO:0003712 TYPES - GO:0016563 COMMON-NAME - transcription coactivator activity SYNONYMS - transcription co-activator activity // UNIQUE-ID - GO:0003714 TYPES - GO:0003712 TYPES - GO:0016564 COMMON-NAME - transcription corepressor activity SYNONYMS - transcription co-repressor activity // UNIQUE-ID - GO:0005070 TYPES - GO:0004871 TYPES - GO:0030674 TYPES - GO:0060090 COMMON-NAME - SH3/SH2 adaptor activity SYNONYMS - SH3/SH2 adaptor protein activity // UNIQUE-ID - GO:0005550 TYPES - GO:0005549 COMMON-NAME - pheromone binding // UNIQUE-ID - GO:0005527 TYPES - GO:0008144 COMMON-NAME - macrolide binding // UNIQUE-ID - GO:0016596 TYPES - GO:0008144 COMMON-NAME - thienylcyclohexylpiperidine binding SYNONYMS - TCP binding // UNIQUE-ID - GO:0005496 TYPES - GO:0008289 COMMON-NAME - steroid binding // UNIQUE-ID - GO:0005504 TYPES - GO:0008289 TYPES - GO:0033293 COMMON-NAME - fatty acid binding // UNIQUE-ID - GO:0005543 TYPES - GO:0008289 COMMON-NAME - phospholipid binding // UNIQUE-ID - GO:0017129 TYPES - GO:0008289 COMMON-NAME - triglyceride binding // UNIQUE-ID - GO:0019992 TYPES - GO:0008289 COMMON-NAME - diacylglycerol binding // UNIQUE-ID - GO:0046625 TYPES - GO:0008289 COMMON-NAME - sphingolipid binding // UNIQUE-ID - GO:0005499 TYPES - GO:0005496 TYPES - GO:0019842 COMMON-NAME - vitamin D binding SYNONYMS - calciferol binding SYNONYMS - cholecalciferol binding SYNONYMS - ergocalciferol binding // UNIQUE-ID - GO:0005501 TYPES - GO:0019840 COMMON-NAME - retinoid binding // UNIQUE-ID - GO:0016918 TYPES - GO:0005501 TYPES - GO:0019842 COMMON-NAME - retinal binding SYNONYMS - blue-sensitive opsin SYNONYMS - green-sensitive opsin SYNONYMS - long-wave-sensitive opsin SYNONYMS - opsin SYNONYMS - red-sensitive opsin SYNONYMS - retinaldehyde binding SYNONYMS - short-wave-sensitive opsin SYNONYMS - UV-sensitive opsin SYNONYMS - violet-sensitive opsin SYNONYMS - vitamin A binding // UNIQUE-ID - GO:0019841 TYPES - GO:0005501 TYPES - GO:0019842 COMMON-NAME - retinol binding SYNONYMS - vitamin A1 alcohol binding SYNONYMS - vitamin A1 binding // UNIQUE-ID - GO:0005542 TYPES - GO:0019842 COMMON-NAME - folic acid binding SYNONYMS - folate binding SYNONYMS - vitamin B9 binding SYNONYMS - vitamin M binding // UNIQUE-ID - GO:0008431 TYPES - GO:0019842 COMMON-NAME - vitamin E binding SYNONYMS - alpha-tocopherol binding SYNONYMS - tocopherol binding // UNIQUE-ID - GO:0009374 TYPES - GO:0019842 TYPES - GO:0033293 COMMON-NAME - biotin binding SYNONYMS - vitamin B7 binding SYNONYMS - vitamin H binding // UNIQUE-ID - GO:0030976 TYPES - GO:0019842 TYPES - GO:0050662 COMMON-NAME - thiamin pyrophosphate binding SYNONYMS - aneurine pyrophosphate binding SYNONYMS - cocarboxylase binding SYNONYMS - diphosphothiamin binding SYNONYMS - thiamine pyrophosphate binding SYNONYMS - TPP binding // UNIQUE-ID - GO:0031177 TYPES - GO:0016597 TYPES - GO:0019842 COMMON-NAME - phosphopantetheine binding // UNIQUE-ID - GO:0031418 TYPES - GO:0031406 TYPES - GO:0019842 COMMON-NAME - L-ascorbic acid binding SYNONYMS - L-ascorbate binding SYNONYMS - vitamin C binding // UNIQUE-ID - GO:0031419 TYPES - GO:0046906 TYPES - GO:0019842 COMMON-NAME - cobalamin binding SYNONYMS - vitamin B12 binding // UNIQUE-ID - GO:0070279 TYPES - GO:0019842 COMMON-NAME - vitamin B6 binding // UNIQUE-ID - GO:0030170 TYPES - GO:0070279 TYPES - GO:0048037 COMMON-NAME - pyridoxal phosphate binding SYNONYMS - vitamin B6 binding // UNIQUE-ID - GO:0005529 TYPES - GO:0030246 COMMON-NAME - sugar binding // UNIQUE-ID - GO:0016597 TYPES - GO:0043176 TYPES - GO:0031406 COMMON-NAME - amino acid binding // UNIQUE-ID - GO:0031405 TYPES - GO:0031406 TYPES - GO:0050662 COMMON-NAME - lipoic acid binding // UNIQUE-ID - GO:0033293 TYPES - GO:0031406 COMMON-NAME - monocarboxylic acid binding // UNIQUE-ID - GO:0030594 TYPES - GO:0004872 TYPES - GO:0042165 COMMON-NAME - neurotransmitter receptor activity // UNIQUE-ID - GO:0035240 TYPES - GO:0042165 COMMON-NAME - dopamine binding // UNIQUE-ID - GO:0042166 TYPES - GO:0042165 TYPES - GO:0043176 COMMON-NAME - acetylcholine binding // UNIQUE-ID - GO:0042923 TYPES - GO:0042165 TYPES - GO:0042277 COMMON-NAME - neuropeptide binding // UNIQUE-ID - GO:0001653 TYPES - GO:0004872 TYPES - GO:0042277 COMMON-NAME - peptide receptor activity SYNONYMS - endogenous peptide receptor activity SYNONYMS - exogenous peptide receptor activity // UNIQUE-ID - GO:0005048 TYPES - GO:0042277 COMMON-NAME - signal sequence binding SYNONYMS - leader sequence binding SYNONYMS - protein signal sequence binding SYNONYMS - signal sequence receptor // UNIQUE-ID - GO:0005047 TYPES - GO:0043021 COMMON-NAME - signal recognition particle binding COMMENT - See also the cellular component term 'signal recognition particle, endoplasmic reticulum targeting ; GO:0005786'. SYNONYMS - docking protein SYNONYMS - signal recognition particle receptor // UNIQUE-ID - GO:0030519 TYPES - GO:0043021 COMMON-NAME - snoRNP binding // UNIQUE-ID - GO:0043022 TYPES - GO:0043021 COMMON-NAME - ribosome binding SYNONYMS - ribosome receptor activity // UNIQUE-ID - GO:0043023 TYPES - GO:0043021 COMMON-NAME - ribosomal large subunit binding // UNIQUE-ID - GO:0043168 TYPES - GO:0043167 COMMON-NAME - anion binding // UNIQUE-ID - GO:0043169 TYPES - GO:0043167 COMMON-NAME - cation binding // UNIQUE-ID - GO:0020037 TYPES - GO:0005506 TYPES - GO:0046906 COMMON-NAME - heme binding SYNONYMS - haem binding // UNIQUE-ID - GO:0050662 TYPES - GO:0048037 COMMON-NAME - coenzyme binding // UNIQUE-ID - GO:0051536 TYPES - GO:0051540 COMMON-NAME - iron-sulfur cluster binding SYNONYMS - Fe/S binding SYNONYMS - iron sulfur cluster binding SYNONYMS - iron sulphur cluster binding SYNONYMS - iron-sulphur cluster binding // UNIQUE-ID - GO:0005246 TYPES - GO:0016247 COMMON-NAME - calcium channel regulator activity // UNIQUE-ID - GO:0015459 TYPES - GO:0016247 COMMON-NAME - potassium channel regulator activity // UNIQUE-ID - GO:0016248 TYPES - GO:0016247 COMMON-NAME - channel inhibitor activity // UNIQUE-ID - GO:0017080 TYPES - GO:0016247 COMMON-NAME - sodium channel regulator activity // UNIQUE-ID - GO:0008073 TYPES - GO:0004857 TYPES - GO:0042979 COMMON-NAME - ornithine decarboxylase inhibitor activity // UNIQUE-ID - GO:0019210 TYPES - GO:0004857 TYPES - GO:0019207 COMMON-NAME - kinase inhibitor activity // UNIQUE-ID - GO:0019212 TYPES - GO:0004857 TYPES - GO:0019888 COMMON-NAME - phosphatase inhibitor activity // UNIQUE-ID - GO:0030414 TYPES - GO:0004857 COMMON-NAME - protease inhibitor activity SYNONYMS - peptidase inhibitor // UNIQUE-ID - GO:0042030 TYPES - GO:0004857 COMMON-NAME - ATPase inhibitor activity SYNONYMS - adenosinetriphosphatase inhibitor // UNIQUE-ID - GO:0055102 TYPES - GO:0004857 COMMON-NAME - lipase inhibitor activity // UNIQUE-ID - GO:0005096 TYPES - GO:0008047 TYPES - GO:0030695 COMMON-NAME - GTPase activator activity SYNONYMS - GAP // UNIQUE-ID - GO:0008538 TYPES - GO:0008047 COMMON-NAME - proteasome activator activity SYNONYMS - PA28 // UNIQUE-ID - GO:0016004 TYPES - GO:0008047 COMMON-NAME - phospholipase activator activity // UNIQUE-ID - GO:0016176 TYPES - GO:0008047 COMMON-NAME - superoxide-generating NADPH oxidase activator activity SYNONYMS - neutrophil cytosol factor 2 // UNIQUE-ID - GO:0016504 TYPES - GO:0008047 COMMON-NAME - protease activator activity // UNIQUE-ID - GO:0019209 TYPES - GO:0008047 TYPES - GO:0019207 COMMON-NAME - kinase activator activity // UNIQUE-ID - GO:0030250 TYPES - GO:0008047 TYPES - GO:0030249 COMMON-NAME - guanylate cyclase activator activity SYNONYMS - guanylin // UNIQUE-ID - GO:0008656 TYPES - GO:0016505 TYPES - GO:0043028 COMMON-NAME - caspase activator activity // UNIQUE-ID - GO:0019887 TYPES - GO:0019207 COMMON-NAME - protein kinase regulator activity // UNIQUE-ID - GO:0035014 TYPES - GO:0019207 COMMON-NAME - phosphoinositide 3-kinase regulator activity COMMENT - See also the molecular function term 'phosphoinositide 3-kinase activity ; GO:0035004'. SYNONYMS - PI3K regulator activity // UNIQUE-ID - GO:0019888 TYPES - GO:0019208 COMMON-NAME - protein phosphatase regulator activity // UNIQUE-ID - GO:0005083 TYPES - GO:0030695 COMMON-NAME - small GTPase regulator activity SYNONYMS - small GTPase regulatory/interacting protein activity // UNIQUE-ID - GO:0005085 TYPES - GO:0030695 COMMON-NAME - guanyl-nucleotide exchange factor activity SYNONYMS - GEF SYNONYMS - GNRP SYNONYMS - guanyl-nucleotide release factor activity SYNONYMS - guanyl-nucleotide releasing factor // UNIQUE-ID - GO:0003704 TYPES - GO:0003702 COMMON-NAME - specific RNA polymerase II transcription factor activity // UNIQUE-ID - GO:0016251 TYPES - GO:0003702 COMMON-NAME - general RNA polymerase II transcription factor activity // UNIQUE-ID - GO:0008159 TYPES - GO:0003711 COMMON-NAME - positive transcription elongation factor activity // UNIQUE-ID - GO:0003716 TYPES - GO:0003715 COMMON-NAME - RNA polymerase I transcription termination factor activity SYNONYMS - Pol I transcription termination factor activity // UNIQUE-ID - GO:0042156 TYPES - GO:0016563 COMMON-NAME - zinc-mediated transcriptional activator activity // UNIQUE-ID - GO:0016565 TYPES - GO:0016564 COMMON-NAME - general transcriptional repressor activity // UNIQUE-ID - GO:0016566 TYPES - GO:0016564 COMMON-NAME - specific transcriptional repressor activity // UNIQUE-ID - GO:0016987 TYPES - GO:0016986 COMMON-NAME - sigma factor activity // UNIQUE-ID - GO:0004872 TYPES - GO:0004871 COMMON-NAME - receptor activity SYNONYMS - immunophilin SYNONYMS - GPI-anchored membrane-bound receptor SYNONYMS - endoplasmic reticulum receptor activity SYNONYMS - peroxisome integral membrane receptor SYNONYMS - peroxisome receptor SYNONYMS - receptor guanylate cyclase activity // UNIQUE-ID - GO:0005057 TYPES - GO:0004871 COMMON-NAME - receptor signaling protein activity SYNONYMS - receptor signalling protein activity // UNIQUE-ID - GO:0005840 TYPES - GO:0044444 TYPES - GO:0030529 TYPES - GO:0043232 COMMON-NAME - ribosome // UNIQUE-ID - GO:0043231 TYPES - GO:0043227 TYPES - GO:0043229 COMMON-NAME - intracellular membrane-bounded organelle // UNIQUE-ID - GO:0043232 TYPES - GO:0043228 TYPES - GO:0043229 COMMON-NAME - intracellular non-membrane-bounded organelle // UNIQUE-ID - GO:0019866 TYPES - GO:0031090 TYPES - GO:0044424 COMMON-NAME - organelle inner membrane COMMENT - See also the cellular component term 'outer membrane ; GO:0019867'. // UNIQUE-ID - GO:0005626 TYPES - GO:0000267 COMMON-NAME - insoluble fraction COMMENT - Note that this term refers to disrupted cells, and does not necessarily correspond to any specific structure(s) in an intact cell. SYNONYMS - particle-bound // UNIQUE-ID - GO:0005886 TYPES - GO:0016020 COMMON-NAME - plasma membrane SYNONYMS - plasma membrane cation-transporting ATPase SYNONYMS - plasma membrane copper transporter SYNONYMS - plasma membrane long-chain fatty acid transporter SYNONYMS - cell membrane SYNONYMS - cytoplasmic membrane SYNONYMS - plasmalemma SYNONYMS - bacterial inner membrane SYNONYMS - juxtamembrane // UNIQUE-ID - GO:0019867 TYPES - GO:0016020 COMMON-NAME - outer membrane // UNIQUE-ID - GO:0009279 TYPES - GO:0019867 TYPES - GO:0044462 COMMON-NAME - cell outer membrane // UNIQUE-ID - GO:0005618 TYPES - GO:0030312 COMMON-NAME - cell wall // UNIQUE-ID - GO:0030112 TYPES - GO:0030312 COMMON-NAME - glycocalyx // UNIQUE-ID - GO:0042603 TYPES - GO:0030312 COMMON-NAME - capsule // UNIQUE-ID - GO:0030313 TYPES - GO:0031975 COMMON-NAME - cell envelope // UNIQUE-ID - GO:0005737 TYPES - GO:0044424 COMMON-NAME - cytoplasm // UNIQUE-ID - GO:0044444 TYPES - GO:0044424 COMMON-NAME - cytoplasmic part SYNONYMS - cytoplasm component // UNIQUE-ID - GO:0031224 TYPES - GO:0044425 COMMON-NAME - intrinsic to membrane COMMENT - Note that proteins intrinsic to membranes cannot be removed without disrupting the membrane, e.g. by detergent. // UNIQUE-ID - GO:0044459 TYPES - GO:0044425 COMMON-NAME - plasma membrane part // UNIQUE-ID - GO:0006955 TYPES - GO:0006952 TYPES - GO:0050874 COMMON-NAME - immune response // UNIQUE-ID - GO:0005996 TYPES - GO:0006066 TYPES - GO:0044262 COMMON-NAME - monosaccharide metabolic process // UNIQUE-ID - GO:0016125 TYPES - GO:0008202 TYPES - GO:0006066 COMMON-NAME - sterol metabolic process // UNIQUE-ID - GO:0018958 TYPES - GO:0006725 TYPES - GO:0006066 COMMON-NAME - phenol metabolic process COMMENT - Note that phenol metabolism is not included as a child of 'xenobiotic metabolism' because although it is synthesized industrially, phenol is also found naturally in animal wastes and other organic materials. It is often formed by the activity of microorganisms, which can chemically modify a variety of xenobiotic and naturally occurring phenolic compounds. SYNONYMS - carbolic acid metabolism SYNONYMS - hydroxybenzene metabolism // UNIQUE-ID - GO:0019751 TYPES - GO:0006066 COMMON-NAME - polyol metabolic process // UNIQUE-ID - GO:0034308 TYPES - GO:0006066 COMMON-NAME - monohydric alcohol metabolic process SYNONYMS - monohydric alcohol metabolism // UNIQUE-ID - GO:0034311 TYPES - GO:0006066 COMMON-NAME - diol metabolic process SYNONYMS - dihydric alcohol metabolic process SYNONYMS - diol metabolism // UNIQUE-ID - GO:0046164 TYPES - GO:0006066 TYPES - GO:0009056 COMMON-NAME - alcohol catabolic process // UNIQUE-ID - GO:0046165 TYPES - GO:0006066 TYPES - GO:0009058 COMMON-NAME - alcohol biosynthetic process SYNONYMS - alcohol anabolism SYNONYMS - alcohol formation SYNONYMS - alcohol synthesis // UNIQUE-ID - GO:0006139 TYPES - GO:0006807 TYPES - GO:0044237 TYPES - GO:0044238 COMMON-NAME - nucleobase, nucleoside, nucleotide and nucleic acid metabolic process // UNIQUE-ID - GO:0009308 TYPES - GO:0006807 COMMON-NAME - amine metabolic process // UNIQUE-ID - GO:0009820 TYPES - GO:0006807 TYPES - GO:0019748 COMMON-NAME - alkaloid metabolic process SYNONYMS - alkaloid metabolism // UNIQUE-ID - GO:0033013 TYPES - GO:0006807 TYPES - GO:0046483 COMMON-NAME - tetrapyrrole metabolic process SYNONYMS - tetrapyrrole metabolism // UNIQUE-ID - GO:0034641 TYPES - GO:0006807 TYPES - GO:0044237 COMMON-NAME - cellular nitrogen compound metabolic process SYNONYMS - cellular nitrogen compound metabolism // UNIQUE-ID - GO:0042430 TYPES - GO:0006807 TYPES - GO:0046483 TYPES - GO:0006725 COMMON-NAME - indole and derivative metabolic process SYNONYMS - ketole metabolism // UNIQUE-ID - GO:0042558 TYPES - GO:0006807 TYPES - GO:0046483 TYPES - GO:0006725 COMMON-NAME - pteridine and derivative metabolic process SYNONYMS - pterin metabolism // UNIQUE-ID - GO:0042723 TYPES - GO:0006725 TYPES - GO:0006767 TYPES - GO:0006790 TYPES - GO:0006807 TYPES - GO:0046483 COMMON-NAME - thiamin and derivative metabolic process SYNONYMS - thiamine and derivative metabolism SYNONYMS - vitamin B1 and derivative metabolism // UNIQUE-ID - GO:0009057 TYPES - GO:0009056 TYPES - GO:0043170 COMMON-NAME - macromolecule catabolic process // UNIQUE-ID - GO:0016042 TYPES - GO:0006629 TYPES - GO:0009056 COMMON-NAME - lipid catabolic process SYNONYMS - lipid breakdown SYNONYMS - lipid catabolism SYNONYMS - lipid degradation SYNONYMS - lipolysis // UNIQUE-ID - GO:0016052 TYPES - GO:0005975 TYPES - GO:0009056 COMMON-NAME - carbohydrate catabolic process SYNONYMS - catabolic carbohydrate metabolism // UNIQUE-ID - GO:0044248 TYPES - GO:0044237 TYPES - GO:0009056 COMMON-NAME - cellular catabolic process // UNIQUE-ID - GO:0008610 TYPES - GO:0006629 TYPES - GO:0009058 COMMON-NAME - lipid biosynthetic process // UNIQUE-ID - GO:0009059 TYPES - GO:0043170 TYPES - GO:0009058 COMMON-NAME - macromolecule biosynthetic process // UNIQUE-ID - GO:0016051 TYPES - GO:0005975 TYPES - GO:0009058 COMMON-NAME - carbohydrate biosynthetic process SYNONYMS - anabolic carbohydrate metabolism // UNIQUE-ID - GO:0044249 TYPES - GO:0009058 TYPES - GO:0044237 COMMON-NAME - cellular biosynthetic process // UNIQUE-ID - GO:0006644 TYPES - GO:0019637 TYPES - GO:0044255 COMMON-NAME - phospholipid metabolic process // UNIQUE-ID - GO:0009698 TYPES - GO:0006575 TYPES - GO:0006725 TYPES - GO:0019748 COMMON-NAME - phenylpropanoid metabolism // UNIQUE-ID - GO:0005976 TYPES - GO:0005975 TYPES - GO:0043170 COMMON-NAME - polysaccharide metabolic process SYNONYMS - glycan metabolism // UNIQUE-ID - GO:0019538 TYPES - GO:0044238 TYPES - GO:0043170 COMMON-NAME - protein metabolic process SYNONYMS - protein metabolism and modification // UNIQUE-ID - GO:0043283 TYPES - GO:0043170 COMMON-NAME - biopolymer metabolic process // UNIQUE-ID - GO:0043412 TYPES - GO:0043170 COMMON-NAME - macromolecule modification // UNIQUE-ID - GO:0044036 TYPES - GO:0043170 COMMON-NAME - cell wall macromolecule metabolic process // UNIQUE-ID - GO:0044260 TYPES - GO:0044237 TYPES - GO:0043170 COMMON-NAME - cellular macromolecule metabolic process // UNIQUE-ID - GO:0010382 TYPES - GO:0044036 TYPES - GO:0044260 TYPES - GO:0070882 COMMON-NAME - cellular cell wall macromolecule metabolic process SYNONYMS - cell wall metabolism // UNIQUE-ID - GO:0006081 TYPES - GO:0044237 COMMON-NAME - cellular aldehyde metabolic process // UNIQUE-ID - GO:0006082 TYPES - GO:0044237 COMMON-NAME - organic acid metabolic process // UNIQUE-ID - GO:0006091 TYPES - GO:0044237 COMMON-NAME - generation of precursor metabolites and energy SYNONYMS - energy pathways // UNIQUE-ID - GO:0006518 TYPES - GO:0044237 COMMON-NAME - peptide metabolic process // UNIQUE-ID - GO:0006519 TYPES - GO:0044237 TYPES - GO:0044238 COMMON-NAME - cellular amino acid and derivative metabolic process // UNIQUE-ID - GO:0006725 TYPES - GO:0044237 COMMON-NAME - cellular aromatic compound metabolic process SYNONYMS - aromatic hydrocarbon metabolism // UNIQUE-ID - GO:0006730 TYPES - GO:0044237 COMMON-NAME - one-carbon metabolic process SYNONYMS - one carbon compound metabolism // UNIQUE-ID - GO:0006766 TYPES - GO:0044237 COMMON-NAME - vitamin metabolic process // UNIQUE-ID - GO:0006790 TYPES - GO:0044237 COMMON-NAME - sulfur metabolic process SYNONYMS - sulphur metabolism // UNIQUE-ID - GO:0006800 TYPES - GO:0044237 COMMON-NAME - oxygen and reactive oxygen species metabolic process SYNONYMS - oxygen and ROS metabolism // UNIQUE-ID - GO:0006805 TYPES - GO:0044237 COMMON-NAME - xenobiotic metabolic process // UNIQUE-ID - GO:0042133 TYPES - GO:0044237 COMMON-NAME - neurotransmitter metabolism // UNIQUE-ID - GO:0042180 TYPES - GO:0044237 COMMON-NAME - cellular ketone metabolic process SYNONYMS - ketone metabolism // UNIQUE-ID - GO:0044255 TYPES - GO:0006629 TYPES - GO:0044237 COMMON-NAME - cellular lipid metabolic process // UNIQUE-ID - GO:0044262 TYPES - GO:0005975 TYPES - GO:0044237 COMMON-NAME - cellular carbohydrate metabolic process // UNIQUE-ID - GO:0046483 TYPES - GO:0044237 COMMON-NAME - heterocycle metabolic process // UNIQUE-ID - GO:0051186 TYPES - GO:0044237 COMMON-NAME - cofactor metabolic process // UNIQUE-ID - GO:0005975 TYPES - GO:0044238 COMMON-NAME - carbohydrate metabolic process // UNIQUE-ID - GO:0006629 TYPES - GO:0044238 COMMON-NAME - lipid metabolic process // UNIQUE-ID - GO:0007165 TYPES - GO:0007154 TYPES - GO:0050794 COMMON-NAME - signal transduction SYNONYMS - neurotrophin TRK receptor activity SYNONYMS - neurotrophin TRKA receptor activity SYNONYMS - neurotrophin TRKB receptor activity SYNONYMS - neurotrophin TRKC receptor activity SYNONYMS - nuclear translocation of MAPK during sporulation (sensu Fungi) SYNONYMS - nuclear translocation of MAPK during sporulation (sensu Saccharomyces) SYNONYMS - MAPKKK cascade during sporulation (sensu Fungi) SYNONYMS - MAPKKK cascade during sporulation (sensu Saccharomyces) SYNONYMS - activation of MAPK during sporulation (sensu Fungi) SYNONYMS - activation of MAPK during sporulation (sensu Saccharomyces) SYNONYMS - activation of MAPKK during sporulation (sensu Fungi) SYNONYMS - activation of MAPKK during sporulation (sensu Saccharomyces) SYNONYMS - activation of MAPKKK during sporulation (sensu Fungi) SYNONYMS - activation of MAPKKK during sporulation (sensu Saccharomyces) SYNONYMS - inactivation of MAPK during sporulation (sensu Fungi) SYNONYMS - inactivation of MAPK during sporulation (sensu Saccharomyces) // UNIQUE-ID - GO:0007267 TYPES - GO:0007154 COMMON-NAME - cell-cell signaling SYNONYMS - cell-cell signalling // UNIQUE-ID - GO:0031668 TYPES - GO:0007154 TYPES - GO:0009991 TYPES - GO:0051716 TYPES - GO:0071496 COMMON-NAME - cellular response to extracellular stimulus // UNIQUE-ID - GO:0034622 TYPES - GO:0034621 TYPES - GO:0065003 COMMON-NAME - cellular macromolecular complex assembly SYNONYMS - cellular macromolecule complex assembly // UNIQUE-ID - GO:0000910 TYPES - GO:0051301 COMMON-NAME - cytokinesis SYNONYMS - cell division // UNIQUE-ID - GO:0033554 TYPES - GO:0006950 TYPES - GO:0051716 COMMON-NAME - cellular response to stress // UNIQUE-ID - GO:0007047 TYPES - GO:0045229 TYPES - GO:0070882 TYPES - GO:0071555 COMMON-NAME - cellular cell wall organization // UNIQUE-ID - GO:0009273 TYPES - GO:0042546 COMMON-NAME - peptidoglycan-based cell wall biogenesis SYNONYMS - cell wall assembly (sensu Bacteria) SYNONYMS - cell envelope biosynthesis // UNIQUE-ID - GO:0065003 TYPES - GO:0022607 TYPES - GO:0043933 COMMON-NAME - macromolecular complex assembly SYNONYMS - macromolecule complex assembly // UNIQUE-ID - GO:0050877 TYPES - GO:0003008 COMMON-NAME - neurological system process SYNONYMS - pan-neural process // UNIQUE-ID - GO:0048513 TYPES - GO:0048856 COMMON-NAME - organ development SYNONYMS - development of an organ SYNONYMS - organogenesis // UNIQUE-ID - GO:0006970 TYPES - GO:0009628 TYPES - GO:0006950 COMMON-NAME - response to osmotic stress SYNONYMS - osmotic response SYNONYMS - osmotic stress response // UNIQUE-ID - GO:0006974 TYPES - GO:0006950 COMMON-NAME - response to DNA damage stimulus // UNIQUE-ID - GO:0006979 TYPES - GO:0006950 TYPES - GO:0042221 COMMON-NAME - response to oxidative stress // UNIQUE-ID - GO:0009414 TYPES - GO:0006950 TYPES - GO:0009415 COMMON-NAME - response to water deprivation SYNONYMS - response to drought SYNONYMS - response to thirst SYNONYMS - response to dehydration // UNIQUE-ID - GO:0009611 TYPES - GO:0009605 TYPES - GO:0006950 COMMON-NAME - response to wounding // UNIQUE-ID - GO:0009613 TYPES - GO:0006950 TYPES - GO:0043207 COMMON-NAME - response to pest, pathogen or parasite SYNONYMS - disease resistance SYNONYMS - response to pest/pathogen/parasite // UNIQUE-ID - GO:0042594 TYPES - GO:0031667 TYPES - GO:0006950 COMMON-NAME - response to starvation // UNIQUE-ID - GO:0009991 TYPES - GO:0009605 COMMON-NAME - response to extracellular stimulus // UNIQUE-ID - GO:0043207 TYPES - GO:0009605 TYPES - GO:0009607 COMMON-NAME - response to external biotic stimulus // UNIQUE-ID - GO:0071496 TYPES - GO:0009605 COMMON-NAME - cellular response to external stimulus SYNONYMS - cellular response to environmental stimulus // UNIQUE-ID - GO:0006952 TYPES - GO:0009607 COMMON-NAME - defense response SYNONYMS - antimicrobial peptide activity SYNONYMS - defense/immunity protein activity SYNONYMS - defence response // UNIQUE-ID - GO:0009415 TYPES - GO:0009628 TYPES - GO:0042221 COMMON-NAME - response to water // UNIQUE-ID - GO:0009410 TYPES - GO:0042221 COMMON-NAME - response to xenobiotic stimulus // UNIQUE-ID - GO:0042493 TYPES - GO:0042221 COMMON-NAME - response to drug // UNIQUE-ID - GO:0006811 TYPES - GO:0006810 COMMON-NAME - ion transport // UNIQUE-ID - GO:0008643 TYPES - GO:0006810 COMMON-NAME - carbohydrate transport SYNONYMS - sugar transport // UNIQUE-ID - GO:0019222 TYPES - GO:0050789 COMMON-NAME - regulation of metabolic process // UNIQUE-ID - GO:0050791 TYPES - GO:0050789 COMMON-NAME - regulation of physiological process // UNIQUE-ID - GO:0050794 TYPES - GO:0050789 COMMON-NAME - regulation of cellular process // UNIQUE-ID - IND-AMINO-ACID-SYN TYPES - Amino-Acid-Biosynthesis COMMON-NAME - Individual Amino Acids Biosynthesis COMMENT - This class contains pathways of biosynthesis of each of the 21 amino acids found in proteins; some amino acids are present in other macromolecules and some enter into other biosynthesis pathways. // UNIQUE-ID - 3-Dehydroquinate-Biosynthesis TYPES - AROMATIC-COMPOUNDS-BIOSYN COMMON-NAME - 3-Dehydroquinate Biosynthesis COMMENT - This class holds pathways for the biosynthesis of 3-dehydroquinate. // UNIQUE-ID - 4-Hydroxybenzoate-Biosynthesis TYPES - AROMATIC-COMPOUNDS-BIOSYN COMMON-NAME - 4-Hydroxybenzoate Biosynthesis COMMENT - This class holds pathways for the biosynthesis of 4-hydroxybenzoate // UNIQUE-ID - Chorismate-Biosynthesis TYPES - AROMATIC-COMPOUNDS-BIOSYN COMMON-NAME - Chorismate Biosynthesis COMMENT - This class holds pathways for the biosynthesis of chorismate // UNIQUE-ID - CARBO-BIOSYNTHESIS TYPES - Carbohydrates-Biosynthesis COMMON-NAME - Sugars Biosynthesis // UNIQUE-ID - Oligosaccharides-Biosynthesis TYPES - Carbohydrates-Biosynthesis COMMON-NAME - Oligosaccharides Biosynthesis // UNIQUE-ID - Polysaccharides-Biosynthesis TYPES - Carbohydrates-Biosynthesis COMMON-NAME - Polysaccharides Biosynthesis // UNIQUE-ID - Acetylmuramoyl-Pentapeptide-Biosynthesis TYPES - Cell-Structure-Biosynthesis COMMON-NAME - UDP-N-acetylmuramoyl-pentapeptide biosynthesis COMMENT - This class holds pathways for the biosynthesis of acetylmuramoyl-pentapeptide, a building block of peptidoglycan. // UNIQUE-ID - Cell-Wall-Biosynthesis TYPES - Cell-Structure-Biosynthesis COMMON-NAME - Cell Wall Biosynthesis // UNIQUE-ID - O-Antigen-Biosynthesis TYPES - Cell-Structure-Biosynthesis COMMON-NAME - O-antigen Biosynthesis COMMENT - O-antigens are part of |FRAME: Lipopolysaccharides|, a major component /of the outer membrane of Gram-negative bacteria. /This class holds pathways for biosynthesis of different O-antigens. // UNIQUE-ID - PLANT-CELL-STRUCTURE TYPES - Cell-Structure-Biosynthesis COMMON-NAME - Plant cell structures COMMENT - This class contains pathways of biosynthesis of components of plant cell walls and their outer surfaces. // UNIQUE-ID - CoA-Biosynthesis TYPES - Cofactor-Biosynthesis COMMON-NAME - Coenzyme A Biosynthesis COMMENT - This class contains pathways of biosynthesis of coenzyme A, its precursor, pantothenate, and its derivatives. CoA acts in metabolism as carrier of acyl groups. // UNIQUE-ID - Lipoate-Biosynthesis TYPES - Cofactor-Biosynthesis COMMON-NAME - Lipoate Biosynthesis COMMENT - This class holds pathways for the biosynthesis and salvage of lipoate. // UNIQUE-ID - NAD-Metabolism TYPES - Cofactor-Biosynthesis COMMON-NAME - NAD Metabolism COMMENT - This class holds pathways for the metabolism of NAD, including biosynthesis, salvage, phosphorylation, and cycling // UNIQUE-ID - Polyprenyl-Biosynthesis TYPES - Cofactor-Biosynthesis COMMON-NAME - Polyprenyl Biosynthesis COMMENT - This class holds pathways for the biosynthesis of polyprenyl compounds // UNIQUE-ID - Porphyrin-Compounds-Biosynthesis TYPES - Cofactor-Biosynthesis COMMON-NAME - Porphyrin Compounds Biosynthesis COMMENT - This class holds pathways for the biosynthesis of compounds that contain a porphyrin ring, such as hemes and sirohemes // UNIQUE-ID - Quinone-Biosynthesis TYPES - Cofactor-Biosynthesis COMMON-NAME - Quinone Biosynthesis COMMENT - This class contains pathways of synthesis of various quinones that participate in respiratory electron transport, through which a trans-membrane ion gradient is generated that serves as a source of energy. Biosynthesis of vitamin E, a quinone, is included here as well as in the class, "Vitamins". // UNIQUE-ID - Reductants TYPES - Cofactor-Biosynthesis COMMON-NAME - Reductants Biosynthesis COMMENT - This class contains pathways by which reductants are synthesized and act. Reductants keep the cell's cytoplasm in a reduced state and enter into certain reductive reactions. // UNIQUE-ID - Tetrahydrobiopterin-Biosynthesis TYPES - Cofactor-Biosynthesis COMMON-NAME - Tetrahydrobiopterin Biosynthesis COMMENT - The class holds pathways for the de novo biosynthesis of tetrahydrobiopterin // UNIQUE-ID - Tetrapyrrole-Biosynthesis TYPES - Cofactor-Biosynthesis COMMON-NAME - Tetrapyrrole Biosynthesis COMMENT - This class holds pathways for the biosynthesis of tetrapyrroles // UNIQUE-ID - Vitamin-Biosynthesis TYPES - Cofactor-Biosynthesis COMMON-NAME - Vitamins COMMENT - This class contains pathways of biosynthesis of various vitamins, essential metabolites that are required in small amounts. / // UNIQUE-ID - Plant-Hormone-Biosynthesis TYPES - HORMONE-SYN COMMON-NAME - Plant Hormones Biosynthesis COMMENT - This class contains pathways through which a variety of plant hormones are synthesized. // UNIQUE-ID - Choline-Biosynthesis TYPES - Lipid-Biosynthesis COMMON-NAME - Choline Biosynthesis // UNIQUE-ID - Fatty-acid-biosynthesis TYPES - Lipid-Biosynthesis COMMON-NAME - Fatty Acid Biosynthesis // UNIQUE-ID - Phospholipid-Biosynthesis TYPES - Lipid-Biosynthesis COMMON-NAME - Phospholipid Biosynthesis COMMENT - This class holds pathways of phospholipids biosynthesis // UNIQUE-ID - Sterol-Biosynthesis TYPES - Lipid-Biosynthesis COMMON-NAME - Sterol Biosynthesis COMMENT - This class contains pathways for the biosynthesis of sterols from isoprenoid precursors. // UNIQUE-ID - AIR-Biosynthesis TYPES - Nucleotide-Biosynthesis COMMON-NAME - 5-Aminoimidazole Ribonucleotide Biosynthesis COMMENT - This class holds pathways for the biosynthesis of 5-aminoimidazole ribonucleotide. // UNIQUE-ID - Deoxyribonucleotide-Biosynthesis TYPES - Nucleotide-Biosynthesis COMMON-NAME - 2'-deoxyribonucleotides // UNIQUE-ID - PUR-NUC-SYN TYPES - Nucleotide-Biosynthesis COMMON-NAME - Purine Nucleotide Biosynthesis // UNIQUE-ID - PYR-NUC-SYN TYPES - Nucleotide-Biosynthesis COMMON-NAME - Pyrimidine Nucleotide Biosynthesis // UNIQUE-ID - Autoinducer-Biosynthesis TYPES - Other-biosynthesis COMMON-NAME - Autoinducer Biosynthesis COMMENT - This class holds pathways for the biosynthesis of autoinducer molecules // UNIQUE-ID - Dimethylsulfoniopropionate-Biosynthesis TYPES - Other-biosynthesis COMMON-NAME - Dimethylsulfoniopropionate Biosynthesis COMMENT - This class holds pathways for the biosynthesis of the osmolyte dimethylsulfoniopropionate (DMSP). // UNIQUE-ID - Mannosylglycerate-Biosynthesis TYPES - Other-biosynthesis COMMON-NAME - Mannosylglycerate Biosynthesis COMMENT - This class hold pathways for the biosynthesis of the compatible solute mannosylglycerate // UNIQUE-ID - PRPP-Biosynthesis TYPES - Other-biosynthesis COMMON-NAME - PRPP Biosynthesis COMMENT - This class holds pathways for the biosynthesis of 5-phosphoribosyl 1-pyrophosphate (PRPP). // UNIQUE-ID - Betaine-Biosynthesis TYPES - Polyamine-Biosynthesis COMMON-NAME - Betaine Biosynthesis COMMENT - This class contains pathways of synthesis of betaine, an osmoprotectant that allows organisms to grow in high-osmolarity environments. Some organism can synthesize betaine de novo from intermediates of central metabolism; other can synthesize it only from exogenously supplied choline. // UNIQUE-ID - Putrescine-Biosynthesis TYPES - Polyamine-Biosynthesis COMMON-NAME - Putrescine Biosynthesis COMMENT - This class holds pathways for the biosynthesis of putrescine // UNIQUE-ID - UDP-Nac-Galactosamine-Biosynthesis TYPES - Polyamine-Biosynthesis COMMON-NAME - UDP-N-acetyl-D-galactosamine Biosynthesis COMMENT - This class holds pathways for the biosynthesis of UDP-N-acetyl-D-galactosamine // UNIQUE-ID - UDP-NAc-Glucosamine-Biosynthesis TYPES - Polyamine-Biosynthesis COMMON-NAME - UDP-N-acetyl-D-glucosamine Biosynthesis COMMENT - This class holds pathways for the biosynthesis of UDP-N-acetyl-D-glucosamine // UNIQUE-ID - Antibiotic-Biosynthesis TYPES - SECONDARY-METABOLITE-BIOSYNTHESIS COMMON-NAME - Antibiotic Biosynthesis COMMENT - This class holds pathways for the biosynthesis of antibiotic compounds // UNIQUE-ID - FATTY-ACID-DERIVATIVE-SYN TYPES - SECONDARY-METABOLITE-BIOSYNTHESIS COMMON-NAME - Fatty Acid Derivatives Biosynthesis COMMENT - This class contains pathways of the biosynthesis of compounds derived from or composed of fatty acids such as triglycerides and cholesteryl esters. These compounds are involved in a wide range of functions including transport and storage of fatty acids, as well as hormonal regulation. // UNIQUE-ID - FLAVONOID-SYN TYPES - SECONDARY-METABOLITE-BIOSYNTHESIS COMMON-NAME - Flavonoids Biosynthesis COMMENT - This class contains pathways of synthesis of various flavonoids. Flavonoids are pigmented secondary metabolites of plants. They play a variety of roles, including acting as attractants, antioxidants, and antifungal agents. // UNIQUE-ID - N-CONTAINING-SECONDARY-CMPD-SYN TYPES - SECONDARY-METABOLITE-BIOSYNTHESIS COMMON-NAME - Nitrogen-Containing Secondary Compounds Biosynthesis COMMENT - This class contains biosynthetic pathways of secondary metabolites that contain nitrogen. Most of the nitrogen containing secondary metabolites are derived from amino acids. Many of them evolved and function as defense compounds. Alkaloids, amines, cyanogenic glucosides and glucosinolates, and non-protein amino acids are the main compounds in this category. // UNIQUE-ID - PHENYLPROPANOID-SYN TYPES - SECONDARY-METABOLITE-BIOSYNTHESIS COMMON-NAME - Phenylpropanoid Derivatives Biosynthesis COMMENT - This class contains pathways by which plants synthesize phenylpropanoids, a group of secondary metabolites that includes phenylpropanoid esters, flavonoids, and anthocyanins. Phenylpropanoids are also precursors of lignin. // UNIQUE-ID - PHYTOALEXIN-SYN TYPES - SECONDARY-METABOLITE-BIOSYNTHESIS COMMON-NAME - Phytoalexins Biosynthesis COMMENT - This class contains pathways of phytoalexins, representing compounds of various metabolic derivations that are induced in response to pathogen attack and are restricted to the infected and surrounding tissues. Phytoalexins are defined by their biological function and not by their structure. Phytoalexins descend from different pathways and are included here as well as under the class of biosynthetic origin. // UNIQUE-ID - POLYKETIDE-SYN TYPES - SECONDARY-METABOLITE-BIOSYNTHESIS COMMON-NAME - Polyketides Biosynthesis COMMENT - This class contains pathways of biosynthesis of polyketides, which are derived from the polymerization of acetyl and propionyl subunits. Polyketides possess a large structural diversity which is reflected by their different bioactivities. Polyketides also serve as building blocks for a variety of other secondary metabolites. // UNIQUE-ID - SUGAR-DERIVS TYPES - SECONDARY-METABOLITE-BIOSYNTHESIS COMMON-NAME - Sugar Derivatives Biosynthesis COMMENT - This class includes all sugar derivatives except for nucleosides. // UNIQUE-ID - Terpenoid-Biosynthesis TYPES - SECONDARY-METABOLITE-BIOSYNTHESIS COMMON-NAME - Terpenoids Biosynthesis COMMENT - This class contains pathways of biosynthesis of terpenoids (also called terpenes) which are secondary metabolites that fulfill many varied functions including various forms of regulation. SYNONYMS - Terpenes // UNIQUE-ID - TERPENOPHENOLICS-SYN TYPES - SECONDARY-METABOLITE-BIOSYNTHESIS COMMON-NAME - Terpenophenolics Biosynthesis COMMENT - This class contains pathways of biosynthesis of terpenophenolics which are unusual natural products of mixed biosynthetic origin. // UNIQUE-ID - XANTHONE-SYN TYPES - SECONDARY-METABOLITE-BIOSYNTHESIS COMMON-NAME - Xanthones Biosynthesis COMMENT - This class contains pathways of biosynthesis of xanthones, which are phenolic compounds and the products of a triketide precursor and a benzenoid unit (C6-C1-C6). Xanthones have interesting pharmaceutical properties and exhibit antitumor as well as antibacterial and antifungic activities. // UNIQUE-ID - 2-3-Butanediol-Degradation TYPES - Alcohol-Degradation COMMON-NAME - 2,3-Butanediol Degradation COMMENT - This class holds pathways for the degradation of the various enantiomers of 2,3-butanediol. // UNIQUE-ID - Ethanol-Degradation TYPES - Alcohol-Degradation COMMON-NAME - Ethanol Degradation COMMENT - This class holds pathway for the degradation of ethanol // UNIQUE-ID - GLYCEROL-DEG TYPES - Alcohol-Degradation COMMON-NAME - Glycerol Degradation COMMENT - This class contains pathways by which the trihydric alcohol, glycerol, can be degraded to serve as a source of carbon and energy. // UNIQUE-ID - Lactaldehyde-Degradation TYPES - Aldehyde-Degradation COMMON-NAME - Lactaldehyde Degradation COMMENT - This class holds pathways for degradation of lactaldehyde. // UNIQUE-ID - 4-Aminobutyraye-Degradation TYPES - AMINE-DEG COMMON-NAME - 4-Aminobutyrate Degradation COMMENT - This class holds pathways for the degradation of 4-aminobutyrate // UNIQUE-ID - Allantoin-degradation TYPES - AMINE-DEG COMMON-NAME - Allantoin Degradation // UNIQUE-ID - CARN-DEG TYPES - AMINE-DEG COMMON-NAME - Carnitine Degradation COMMENT - Variant pathways for degradation of carnitine. // UNIQUE-ID - Choline-Degradation TYPES - AMINE-DEG COMMON-NAME - Choline Degradation COMMENT - This class holds pathways for the degradation of choline and its direct derivatives // UNIQUE-ID - Creatinine-Degradation TYPES - AMINE-DEG COMMON-NAME - Creatinine Degradation COMMENT - This class contains pathways for the degradation of creatinine // UNIQUE-ID - Putrescine-Degradation TYPES - AMINE-DEG COMMON-NAME - Putrescine Degradation // UNIQUE-ID - Urea-Degradation TYPES - AMINE-DEG COMMON-NAME - Urea Degradation COMMENT - This class holds pathways for the degradation of urea, an organic carbamide // UNIQUE-ID - 4-Hydroxyproline-Degradation TYPES - Amino-Acid-Degradation COMMON-NAME - 4-Hydroxyproline Degradation COMMENT - This class holds pathways for the degradation of 4-hydroxyproline. // UNIQUE-ID - ALANINE-DEG TYPES - Amino-Acid-Degradation COMMON-NAME - Alanine Degradation COMMENT - This class contains pathways of the degradation of D- and L- forms of the amino acid, alanine, that permit the cell to use this amino acid, when exogenously supplied, as a source of carbon and nitrogen. // UNIQUE-ID - ARGININE-DEG TYPES - Amino-Acid-Degradation COMMON-NAME - Arginine Degradation COMMENT - This class contains pathways by which the amino acid, arginine, and the structurally and metabolically related polyamines are degraded to serve as sources of nitrogen, carbon, and energy. Other amino acids, histidine and alanine, can be made from arginine by some of these pathways. // UNIQUE-ID - ASPARAGINE-DEG TYPES - Amino-Acid-Degradation COMMON-NAME - Asparagine Degradation COMMENT - This class contains pathways of degradation of the amino acid, asparagine. The pathways provide a source of nutrients and energy. // UNIQUE-ID - ASPARTATE-DEG TYPES - Amino-Acid-Degradation COMMON-NAME - Aspartate Degradation COMMENT - This class contains pathways of degradation of the amino acid, aspartate. The pathways provide a source of nutrients and energy. // UNIQUE-ID - CYSTEINE-DEG TYPES - Amino-Acid-Degradation COMMON-NAME - Cysteine Degradation COMMENT - This class contains pathways of degradation by various organisms of cysteine to serve as a source of nutrients and energy. // UNIQUE-ID - GLUTAMATE-DEG TYPES - Amino-Acid-Degradation COMMON-NAME - Glutamate Degradation COMMENT - This class contains pathways through which various organism degrade the amino acid, glutamate, to serve as a source of nutrients and energy. // UNIQUE-ID - GLUTAMINE-DEG TYPES - Amino-Acid-Degradation COMMON-NAME - Glutamine Degradation COMMENT - This class contains pathways by which various organism degrade the amino acid, glutamine, to serve as a source of nutrients and energy. // UNIQUE-ID - GLYCINE-DEG TYPES - Amino-Acid-Degradation COMMON-NAME - Glycine Degradation // UNIQUE-ID - HISTIDINE-DEG TYPES - Amino-Acid-Degradation COMMON-NAME - Histidine Degradation COMMENT - This class contains pathways by which various organisms degrade the amino acid, histidine, to serve as a source of nutrients and energy. // UNIQUE-ID - HOMOCYSTEINE-DEG TYPES - Amino-Acid-Degradation COMMON-NAME - Homocysteine Degradation // UNIQUE-ID - HOMOSERINE-DEG TYPES - Amino-Acid-Degradation COMMON-NAME - Homoserine Degradation // UNIQUE-ID - ISOLEUCINE-DEG TYPES - Amino-Acid-Degradation COMMON-NAME - Isoleucine Degradation COMMENT - This class contains pathways by which various organisms degrade the amino acid, isoleucine, to serve as a source of nutrients. // UNIQUE-ID - LEUCINE-DEG TYPES - Amino-Acid-Degradation COMMON-NAME - Leucine Degradation COMMENT - This class contains pathways by which various organisms degrade the amino acid, leucine, to utilize it as a source of nutrients and energy. // UNIQUE-ID - LYSINE-DEG TYPES - Amino-Acid-Degradation COMMON-NAME - Lysine Degradation COMMENT - This class contains pathways by which various organisms degrade the amino acid, lysine, to utilize it as a source of nutrients and energy, or, in environments of low pH, to covert lysine to an amine thereby moderating the external acidity. // UNIQUE-ID - METHIONINE-DEG TYPES - Amino-Acid-Degradation COMMON-NAME - Methionine Degradation COMMENT - This class contains pathways by which various organisms utilize the amino acid, methionine, as a source nutrients and energy. // UNIQUE-ID - MISCELLANEOUS-DEG TYPES - Amino-Acid-Degradation COMMON-NAME - Miscellaneous Amino Acids Degradation COMMENT - This class contains pathways by which various organisms degrade certain amino acids that do not occur in proteins in order to use them as sources of nutrients and metabolic energy. // UNIQUE-ID - PHENYLALANINE-DEG TYPES - Amino-Acid-Degradation COMMON-NAME - Phenylalanine Degradation COMMENT - This class contains pathways by which various organisms degrade the amino acid, phenylalanine, to utilize it as a source of nutrients and metabolic energy. // UNIQUE-ID - PROLINE-DEG TYPES - Amino-Acid-Degradation COMMON-NAME - Proline Degradation COMMENT - This class contains pathways by which various organisms degrade the amino acid, proline, as a source of nutrients and energy or convert it to the amino acid, glutamate. // UNIQUE-ID - SERINE-DEG TYPES - Amino-Acid-Degradation COMMON-NAME - Serine Degradation // UNIQUE-ID - THREONINE-DEG TYPES - Amino-Acid-Degradation COMMON-NAME - Threonine Degradation COMMENT - This class contains various pathways of degradation of the amino acid, threonine, in some but not all cases to be used as a source of carbon and energy. // UNIQUE-ID - TRYPTOPHAN-DEG TYPES - Amino-Acid-Degradation COMMON-NAME - Tryptophan Degradation COMMENT - This class contains pathways by which various organisms utilize the amino acid, tryptophan as a source of nutrients and energy as well as to convert it to the plant hormone, auxin. // UNIQUE-ID - TYROSINE-DEG TYPES - Amino-Acid-Degradation COMMON-NAME - Tyrosine Degradation // UNIQUE-ID - VALINE-DEG TYPES - Amino-Acid-Degradation COMMON-NAME - Valine Degradation COMMENT - This class contains pathways of utilization of the amino acid, valine, as a source of nutrients and energy. // UNIQUE-ID - 2-Aminobenzoate-Degradation TYPES - AROMATIC-COMPOUNDS-DEGRADATION COMMON-NAME - 2-Aminobenzoate Degradation COMMENT - This class holds pathways for the degradation of 2-aminobenzoate. // UNIQUE-ID - Benzoate-Degradation TYPES - AROMATIC-COMPOUNDS-DEGRADATION COMMON-NAME - Benzoate Degradation COMMENT - This class holds pathways for the degradation of benzoate. // UNIQUE-ID - Benzoyl-CoA-Degradation TYPES - AROMATIC-COMPOUNDS-DEGRADATION COMMON-NAME - Benzoyl-CoA Degradation COMMENT - This class holds pathways for the degradation of benzoyl-coA. // UNIQUE-ID - Catechol-Degradation TYPES - AROMATIC-COMPOUNDS-DEGRADATION COMMON-NAME - Catechol Degradation COMMENT - This class hoplds pathways for the degradation of catechol // UNIQUE-ID - Chloroaromatic-Compounds-Degradation TYPES - AROMATIC-COMPOUNDS-DEGRADATION TYPES - CHLORINATED-COMPOUNDS-DEG COMMON-NAME - Chloroaromatic Compounds Degradation COMMENT - This class holds pathways for the degradation of chlorinated aromatic compounds. // UNIQUE-ID - Fluorene-Degradation TYPES - AROMATIC-COMPOUNDS-DEGRADATION COMMON-NAME - Fluorene Degradation COMMENT - This class holds pathways for the degradation of fluorene // UNIQUE-ID - GALLATE-DEG TYPES - AROMATIC-COMPOUNDS-DEGRADATION COMMON-NAME - Gallate Degradation COMMENT - This class contains pathways of degradation by various organisms of the polyphenolic acid, gallate, to serve as a source of carbon and energy. // UNIQUE-ID - MANDELATE-DEG TYPES - AROMATIC-COMPOUNDS-DEGRADATION COMMON-NAME - Mandelates Degradation // UNIQUE-ID - Nicotinate-Degradation TYPES - AROMATIC-COMPOUNDS-DEGRADATION COMMON-NAME - Nicotinate Degradation // UNIQUE-ID - Nitroaromatic-Degradation TYPES - AROMATIC-COMPOUNDS-DEGRADATION COMMON-NAME - Nitroaromatic Compounds Degradation // UNIQUE-ID - Phenolic-Compounds-Degradation TYPES - AROMATIC-COMPOUNDS-DEGRADATION COMMON-NAME - Phenolic Compounds Degradation COMMENT - This class holds pathways for the degradation of phenolic compounds // UNIQUE-ID - Protocatechuate-Degradation TYPES - AROMATIC-COMPOUNDS-DEGRADATION COMMON-NAME - Protocatechuate Degradation COMMENT - This class holds pathways for the degradation of protocatechuate // UNIQUE-ID - Quinate-Degradation TYPES - AROMATIC-COMPOUNDS-DEGRADATION COMMON-NAME - Quinate Degradation COMMENT - This class holds pathways for the degradation of quinate. // UNIQUE-ID - s-Triazine-Degradation TYPES - AROMATIC-COMPOUNDS-DEGRADATION COMMON-NAME - s-Triazine Degredation // UNIQUE-ID - Salicylate-Degradation TYPES - AROMATIC-COMPOUNDS-DEGRADATION COMMON-NAME - Salicylate Degradation COMMENT - This class holds pathways for the degradation of salicylate // UNIQUE-ID - Shikimate-Degradation TYPES - AROMATIC-COMPOUNDS-DEGRADATION COMMON-NAME - Shikimate Degradation COMMENT - This class holds pathways for the degradation of shikimate. // UNIQUE-ID - Sulfoaromatics-Degradation TYPES - AROMATIC-COMPOUNDS-DEGRADATION COMMON-NAME - Sulfoaromatic Compounds Degradation COMMENT - This class holds pathways for the degradation of sulfoaromatic compounds. // UNIQUE-ID - TOLUENE-DEG TYPES - AROMATIC-COMPOUNDS-DEGRADATION COMMON-NAME - Toluenes Degradation COMMENT - This class contains pathways by which various organisms utilize, aerobically and anaerobically, the aromatic compound, toluene, as a source of carbon and energy. // UNIQUE-ID - Urate-Degradation TYPES - AROMATIC-COMPOUNDS-DEGRADATION COMMON-NAME - Urate Degradation COMMENT - This class holds pathways for the degradation of urate // UNIQUE-ID - Xylene-Degradation TYPES - AROMATIC-COMPOUNDS-DEGRADATION COMMON-NAME - Xylene Degradation COMMENT - This class holds pathways for the degradation of xylene // UNIQUE-ID - CO2-Fixation TYPES - C1-COMPOUNDS COMMON-NAME - CO2 Fixation COMMENT - This class holds pathways for carbon dioxide fixation // UNIQUE-ID - Formaldehyde-Assimilation TYPES - C1-COMPOUNDS COMMON-NAME - Formaldehyde Assimilation COMMENT - This class holds pathways for the assimilation of formaldehyde // UNIQUE-ID - Formaldehyde-Oxidation TYPES - C1-COMPOUNDS COMMON-NAME - Formaldehyde Oxidation COMMENT - This class holds pathways for the oxidation of formaldehyde // UNIQUE-ID - POLYSACCHARIDES-DEG TYPES - Polymer-Degadation TYPES - Carbohydrates-Degradation COMMON-NAME - Polysaccharides Degradation // UNIQUE-ID - Sugars-And-Polysaccharides TYPES - Carbohydrates-Degradation COMMON-NAME - Sugars Degradation COMMENT - This class contains pathways of biosynthesis of sugars, which fulfill a number of functions, principally serving as reserves of carbon and energy. The disaccharide, trehalose acts as an osmoprotectant. // UNIQUE-ID - 2-Oxobutanoate-Degradation TYPES - CARBOXYLATES-DEG COMMON-NAME - 2-Oxobutanoate Degradation COMMENT - This class holds pathways for the degradation of 2-oxobutanoate. // UNIQUE-ID - Acetate-Formation TYPES - CARBOXYLATES-DEG COMMON-NAME - Acetate Formation // UNIQUE-ID - Malonate-Degradation TYPES - CARBOXYLATES-DEG COMMON-NAME - Malonate Degradation COMMENT - This class holds pathways for the degradation of malonate. // UNIQUE-ID - Propionate-Degradation TYPES - CARBOXYLATES-DEG COMMON-NAME - Propionate Degradation COMMENT - This class contains pathways of degradation of the carboxylate, propionate, to serve as a source of carbon and energy. // UNIQUE-ID - SUCC-DEG TYPES - CARBOXYLATES-DEG COMMON-NAME - Succinate Degradation // UNIQUE-ID - Carbon-tetrachloride-degradation TYPES - CHLORINATED-COMPOUNDS-DEG COMMON-NAME - Carbon Tetrachloride Degradation COMMENT - This class holds pathways for the degradation of carbon tetrachloride // UNIQUE-ID - HEME TYPES - COFACTOR-DEGRADATION COMMON-NAME - Heme Compounds Degradation // UNIQUE-ID - Acetone-Degradation TYPES - Fatty-Acid-and-Lipid-Degradation COMMON-NAME - Acetone Degradation COMMENT - This class holds pathways for the degradation of acetone // UNIQUE-ID - Fatty-Acid-Degradation TYPES - Fatty-Acid-and-Lipid-Degradation COMMON-NAME - Fatty Acids Degradation COMMENT - This class contains pathways for the oxidation of fatty acids // UNIQUE-ID - Melatonin-Degradation TYPES - HORMONE-DEG COMMON-NAME - melatonin degradation COMMENT - This class holds different pathways for the degradation of melatonin. // UNIQUE-ID - PLANT-HORMONE-DEG TYPES - HORMONE-DEG COMMON-NAME - Plant Hormones Degradation COMMENT - This class contains pathways of the degradation of various plant hormones, small signaling molecules regulate and coordinate plant metabolism, growth and morphogenesis. // UNIQUE-ID - Thyroid-Hormone-Metabolism TYPES - HORMONE-DEG COMMON-NAME - thyroid hormone metabolism COMMENT - This class contains pathways for thyroid hormone metabolism via deiodination, conjugation and degradation. // UNIQUE-ID - NITROGEN-DEG TYPES - Noncarbon-Nutrients COMMON-NAME - Nitrogen Compounds Metabolism COMMENT - This class contains pathways of metabolism of various forms of inorganic nitrogen through which they converted to ammonia, which is assimilated. // UNIQUE-ID - Phosphorus-Compounds TYPES - Noncarbon-Nutrients COMMON-NAME - Phosphorus Compounds Metabolism COMMENT - This class contains pathways of degradation of phosphonates to be used as a source of phosphate as well as carbon and energy. // UNIQUE-ID - Sulfur-Assimilation TYPES - Noncarbon-Nutrients COMMON-NAME - Sulfur Compounds Metabolism COMMENT - This class contains pathways of assimilation of sulfur from organic and inorganic sources as well as pathways of oxidation of reduced sulfur to yield energy. // UNIQUE-ID - Purine-Degradation TYPES - NUCLEO-DEG COMMON-NAME - Purine Degradation COMMENT - This class holds pathways for the degradation of purines // UNIQUE-ID - Carbon-disulfide-degradation TYPES - Other-Degradation COMMON-NAME - Carbon-Disulfide Degradation COMMENT - This class holds pathways for the degradation of carbon disulfide // UNIQUE-ID - Nicotine-Degradation TYPES - Other-Degradation COMMON-NAME - Nicotine Degradation COMMENT - This class holds pathways for degradation of nicotine // UNIQUE-ID - Thiocyanate-Degradation TYPES - Other-Degradation COMMON-NAME - Thiocyanate Degradation // UNIQUE-ID - FATTY-ACID-DERIVATIVE-DEG TYPES - SECONDARY-METABOLITE-DEGRADATION COMMON-NAME - Fatty Acid Derivatives Degradation COMMENT - This class contains pathways of the degradation of compounds derived from or composed of fatty acids. // UNIQUE-ID - FLAVONOID-DEG TYPES - SECONDARY-METABOLITE-DEGRADATION COMMON-NAME - Flavonoids Degradation COMMENT - This class contains pathways of degradation of various flavonoids. Flavonoids are pigmented secondary metabolites of plants involved in important signaling, defense and antioxidant pathways. // UNIQUE-ID - N-CONTAINING-SECONDARY-CMPD-DEG TYPES - SECONDARY-METABOLITE-DEGRADATION COMMON-NAME - Nitrogen Containing Secondary Compounds Degradation COMMENT - This class contains catabolic pathways of secondary metabolites that contain nitrogen. Most of the nitrogen containing secondary metabolites are derived from amino acids. Many of them evolved and function as defense compounds. Alkaloids, amines, cyanogenic glucosides and glucosinolates, and non-protein amino acids are the main compounds in this category. // UNIQUE-ID - PHENYLPROPANOID-DERIVATIVE-DEG TYPES - SECONDARY-METABOLITE-DEGRADATION COMMON-NAME - Phenylpropanoid Derivatives Degradation COMMENT - This class contains catabolic pathways by which plants utilize phenylpropanoids, a group of secondary metabolites that includes e.g. phenylpropanoid esters, flavonoids, and anthocyanins. // UNIQUE-ID - PHYTOALEXIN-DEG TYPES - SECONDARY-METABOLITE-DEGRADATION COMMON-NAME - Phytoalexins Degradation COMMENT - This class contains catabolic pathways of phytoalexins, representing compounds of various metabolic derivations that are induced in response to pathogen attack and are restricted to the infected and surrounding tissues. Phytoalexins are defined by their biological function and not by their structure. // UNIQUE-ID - POLYKETIDE-DEG TYPES - SECONDARY-METABOLITE-DEGRADATION COMMON-NAME - Polyketides Degradation COMMENT - This class contains catabolic pathways of polyketides, which are derived from the polymerization of acetyl and propionyl subunits. Polyketides and their degradation products possess a large structural diversity which is reflected by their different bioactivities. // UNIQUE-ID - Sugar-Derivatives TYPES - SECONDARY-METABOLITE-DEGRADATION COMMON-NAME - Sugar Derivatives Degradation COMMENT - This class contains pathways of utilization of various sugar derivatives, including sugar acids and sugar alcohols, as sources of carbon and energy. // UNIQUE-ID - TERPENOID-DEG TYPES - SECONDARY-METABOLITE-DEGRADATION COMMON-NAME - Terpenoids Degradation COMMENT - This class contains pathways of degradation of terpenoids (also called terpenes) which are secondary metabolites of plants that fulfill many varied functions including various forms of regulation. // UNIQUE-ID - XANTHONE-DEG TYPES - SECONDARY-METABOLITE-DEGRADATION COMMON-NAME - Xanthones Degradation COMMENT - This class contains pathways of degradation of xanthones, which are phenolic compounds and the products of a triketide precursor and a benzenoid unit (C6-C1-C6). // UNIQUE-ID - Hydrogen-Oxidation TYPES - CHEMOAUTOTROPHIC-ENERGY-METABOLISM COMMON-NAME - Hydrogen Oxidation COMMENT - This class holds pathways for the oxidation of molecular hydrogen. // UNIQUE-ID - Acetoin-Biosynthesis TYPES - Fermentation COMMON-NAME - Acetoin Biosynthesis COMMENT - This class holds pathways for the biosynthesis of acetoin // UNIQUE-ID - Acetyl-CoA-Butyrate TYPES - Fermentation COMMON-NAME - Acetyl-CoA Fermentation to Butyrate COMMENT - This class holds pathways for the fermentation of acetyl-CoA to butyrate // UNIQUE-ID - Butanediol-Biosynthesis TYPES - Fermentation COMMON-NAME - Butanediol Biosynthesis COMMENT - This class holds pathways for the biosynthesis of butanediol. // UNIQUE-ID - Pyruvate-Degradation TYPES - Fermentation COMMON-NAME - Pyruvate Fermentation COMMENT - This class holds pathways for the fermentation of pyruvate. // UNIQUE-ID - AEROBIC-RESPIRATION TYPES - Respiration COMMON-NAME - Aerobic Respiration COMMENT - This class contains pathways through which electrons flow from various organic and inorganic electron donors to oxygen as the terminal electron acceptor. The passage of electrons through intermediates of the pathway, which are membrane-bound, generates a trans-membrane ion gradient, which serves as a source of metabolic energy. // UNIQUE-ID - ANAEROBIC-RESPIRATION TYPES - Respiration COMMON-NAME - Anaerobic Respiration COMMENT - This class contains pathways of the various electron flows of anaerobic respiration including, from various compounds donating electron to the electron transport chain, through the chain itself, and to compounds serving as terminal acceptors of electrons from the chain. The passage of electrons through components of the electron-transport chain, which are membrane-bound, generates a trans-membrane ion gradient, which serves as a source of energy. // UNIQUE-ID - Degradation-Processes TYPES - Complex-Processes COMMENT - Processes in which a macromolecule is degraded. Generally no compounds are specified for the right hand side of the equation -- it is assumed that the eventual end products will be the basic building blocks from which the macromolecule is constructed (i.e. amino acids for a protein, nucleotides for DNA or RNA). // UNIQUE-ID - Binding-Reactions TYPES - Simple-Reactions COMMENT - This class consists of reactions in which no covalent modification of the substrates takes place, but in which the net effect is that one substrate /noncovalently binds to or unbinds from another molecule via weak bonds (e.g. hydrogen bonds). This class includes protein complex assembly /and dissociation reactions. In reactions of this class, each of the substrates maintains its original molecular identity, meaning reactions of this class /affect intermolecular bonds, not intramolecular bonds. // UNIQUE-ID - Chemical-Reactions TYPES - Simple-Reactions COMMENT - Chemical-Reactions are those for which at least one substrate molecule is chemically modified, /meaning that either a chemical bond (covalent, ionic or coodination) is formed and/or broken, /or that a redox modification has occurred. / // UNIQUE-ID - Redox-Half-Reactions TYPES - Simple-Reactions COMMENT - Redox half reactions are elementary reactions, in which explicitly /stated electrons are reducing an oxidized molecular species. These /reactions do not stand alone, because electrons do not occur freely. /Instead, a half reaction must be paired with another half reaction to /form a complete, overall transformation. / /The convention adopted here is to write the half reactions always in /the same direction, namely in the form: / /Ox. + e- --> Red. / /In other words, the oxidized species and the electrons are always in /the LEFT slot, and the reduced species are always in the RIGHT slot. / /This reaction direction allows the standard reduction potential to be /directly recorded in the STD-REDUCTION-POTENTIAL slot, such that /reactions of this type are comparable with each other. // UNIQUE-ID - Transport-Reactions TYPES - Simple-Reactions COMMENT - Transport reactions are reactions in which at least one species is transported /(passively or actively) across a membrane. The species may or may not be chemically /modified in the course of the reaction. A transport reaction is assumed to occur /physiologically in the direction written; if it proceeds in the reverse direction, this /fact should be indicated in the enzymatic-reaction for a given transporter. / // UNIQUE-ID - Polynucleotide-Reactions TYPES - Macromolecule-Reactions COMMENT - Reactions in which at least one substrate is a DNA or RNA molecule. // UNIQUE-ID - Polysaccharide-Reactions TYPES - Macromolecule-Reactions COMMENT - Reactions in which at least one substrate is a polysaccharide macromolecule (e.g. glycogen). This does not include small polysaccharides /with a completely specified chemical structure (e.g. disaccharides) -- reactions of those molecules are better classed as /Small-Molecule-Reactions. // UNIQUE-ID - Protein-Reactions TYPES - Macromolecule-Reactions COMMENT - Reactions in which at least one substrate is a protein monomer, a complex containing a protein, or a modified protein. // UNIQUE-ID - TAX-1117 TYPES - TAX-2 COMMON-NAME - Cyanobacteria SYNONYMS - cyanophytes SYNONYMS - cyanobacteria SYNONYMS - blue-green bacteria SYNONYMS - blue-green algae SYNONYMS - Oxyphotobacteria SYNONYMS - Oxygenic photosynthetic bacteria SYNONYMS - Cyanophyta SYNONYMS - Cyanophycota SYNONYMS - Cyanophyceae // UNIQUE-ID - TAX-1224 TYPES - TAX-2 COMMON-NAME - Proteobacteria SYNONYMS - purple photosynthetic bacteria and relatives SYNONYMS - purple photosynthetic bacteria SYNONYMS - purple non-sulfur bacteria SYNONYMS - purple bacteria and relatives SYNONYMS - purple bacteria SYNONYMS - proteobacteria SYNONYMS - not Proteobacteria Cavalier-Smith 2002 SYNONYMS - Proteobacteria Garrity et al. 2005 SYNONYMS - Proteobacteria (as class) Stackebrandt et al. 1988 // UNIQUE-ID - TAX-1239 TYPES - TAX-2 COMMON-NAME - Firmicutes SYNONYMS - low GC Gram+ SYNONYMS - low GC gram-positives SYNONYMS - low G+C Gram-positive bacteria SYNONYMS - firmicutes SYNONYMS - clostridial firmicutes SYNONYMS - Low G+C firmicutes SYNONYMS - Gram-positive bacteria SYNONYMS - Firmicutes corrig. Gibbons and Murray 1978 SYNONYMS - Firmacutes SYNONYMS - Clostridium group firmicutes SYNONYMS - Bacillus/Clostridium group // UNIQUE-ID - TAX-33090 TYPES - TAX-2759 COMMON-NAME - Viridiplantae SYNONYMS - green plants SYNONYMS - chlorophyte/embryophyte group SYNONYMS - Viridiplantae Cavalier-Smith 1981 SYNONYMS - Chlorophyta/Embryophyta group SYNONYMS - Chlorobionta Bremer 1985 SYNONYMS - Chlorobionta // UNIQUE-ID - TAX-33154 TYPES - TAX-2759 COMMON-NAME - Fungi/Metazoa group SYNONYMS - opisthokonts SYNONYMS - Opisthokonta // UNIQUE-ID - MultiFun TYPES - Genes COMMENT - The MultiFun ontology assigns genes to ontology classes based on the function /of the gene product. / // UNIQUE-ID - ORFs TYPES - Genes COMMENT - This class describes open reading frames, more specifically, genes of unknown function, or /genes for which only extremely limited information about their function has /been obtained, such as from sequence analysis. In many cases ORFs have /been predicted from complete genomes using gene-finding programs. In /some cases those predictions are incorrect. // UNIQUE-ID - Unclassified-Genes TYPES - Genes COMMON-NAME - UNCLASSIFIED COMMENT - Genes that have not been assigned to a class within the MultiFun ontology. / // UNIQUE-ID - Cryptic-Genes TYPES - Pseudo-Genes COMMENT - A cryptic gene is a pseudogene that is not functional because it is not expressed. /Therefore, cryptic genes should not have products defined within the PGDB. / // UNIQUE-ID - Interrupted-Genes TYPES - Pseudo-Genes COMMENT - Interrupted genes are pseudogenes that are not functional because they contain /an interruption such as a premature stop codon, or a prophage insert. Imagine /a pseudogene that is interrupted by two internal stop codons. This situation /would be represented by creating three instances of Interrupted-Genes, /one for each fragment of the pseudo gene. / // UNIQUE-ID - Mutagenesis-Variants TYPES - Experimental-Sequence-Variants COMMENT - Protein sequence modifications resulting from experimental mutagenesis. // UNIQUE-ID - Sequence-Conflicts TYPES - Experimental-Sequence-Variants COMMENT - Sequence variations which are due to disagreement between published protein sequences from different researchers. // UNIQUE-ID - Sequence-Uncertainties TYPES - Experimental-Sequence-Variants COMMENT - Regions of a sequence for which there is uncertainty about the sequence. // UNIQUE-ID - Intrachain-Disulfide-Bonds TYPES - Disulfide-Bond-Sites TYPES - Intrachain-Crosslinks COMMENT - The two specified cysteine residues are linked to each other by a disulfide bond. // UNIQUE-ID - CCO-CLATH-VES TYPES - CCO-COATED-VES COMMON-NAME - clathrin-coated vesicle // UNIQUE-ID - CCO-COPI-VES TYPES - CCO-COATED-VES COMMON-NAME - COPI-coated vesicle // UNIQUE-ID - CCO-COPII-VES TYPES - CCO-COATED-VES COMMON-NAME - COPII-coated vesicle // UNIQUE-ID - 2-Oxo-Acids TYPES - All-Carboxy-Acids COMMON-NAME - a 2-oxo acid COMMENT - This compound class stands for generic and unspecified 2-oxo acids. SYNONYMS - 2-oxo acid // UNIQUE-ID - Aromatic-Oxoacids TYPES - All-Carboxy-Acids COMMON-NAME - an aromatic oxo-acid COMMENT - The R group in this structure contains an aromatic ring. // UNIQUE-ID - Carboxylates TYPES - All-Carboxy-Acids COMMON-NAME - a carboxylate SYNONYMS - carboxylic acid SYNONYMS - carboxylate // UNIQUE-ID - dicarboxylate TYPES - All-Carboxy-Acids COMMON-NAME - a dicarboxylate // UNIQUE-ID - Monocarboxylates TYPES - All-Carboxy-Acids COMMON-NAME - a monocarboxylate // UNIQUE-ID - Teichoic-acid-components TYPES - Teichoic-Acid COMMON-NAME - a teichoic acid component // UNIQUE-ID - Inositols TYPES - Cyclitols COMMON-NAME - an inositol COMMENT - Inositols are a subgroup of Cyclitols. // UNIQUE-ID - Carveols TYPES - Monoterpenols COMMON-NAME - a carveol // UNIQUE-ID - Dihydrocarveols TYPES - Monoterpenols COMMON-NAME - a dihydrocarveol // UNIQUE-ID - Farnesols TYPES - Monoterpenols COMMON-NAME - farnesol COMMENT - |FRAME: FARNESYL-PP| (FPP) has been recognized as a key intermediate in the biosynthesis of more /complex sesquiterpenoids, higher terpenoids, and steroids for many years, and more recently many /other roles have been discovered for both the pyrophosphate form and the corresponding alcohol /farnesol. / /For example, farnesol acts as a quorum-sensing molecule to suppress filamentation in the fungus /|FRAME: TAX-5476| |CITS: [12954333]|, and farnesyl derivatives are involved in the a-factor mating /peptide of the dodecapeptide pheromone found in |FRAME: TAX-559292| |CITS: [11112575]|. /Terpene alcohols such as farnesol have antibacterial effects against |FRAME: TAX-1280|, /including promotion of potassium ion leakage |CITS: [15321680]|. /Furthermore, FPP plays a pivotal role in the posttranslational processing of Ras proteins. / /Farnesol has 4 isomer, the most abundant of which is |FRAME:2-TRANS6-TRANS-FARNESOL| /|CITS: [Yu05]|. // UNIQUE-ID - Linalools TYPES - Monoterpenols COMMON-NAME - a linalool // UNIQUE-ID - Alditols TYPES - Sugar-alcohols COMMON-NAME - an alditol SYNONYMS - a glycitol SYNONYMS - a sugar alcohol // UNIQUE-ID - L-Arabinosides TYPES - Sugar-alcohols COMMON-NAME - an L-arabinoside // UNIQUE-ID - Fatty-Aldehydes TYPES - Aldehydes COMMON-NAME - a fatty aldehyde // UNIQUE-ID - Ketals TYPES - Aldehydes TYPES - LONG-CHAIN-KETONE COMMON-NAME - a ketoaldehyde // UNIQUE-ID - Lactaldehydes TYPES - Aldehydes COMMON-NAME - DL-lactaldehyde // UNIQUE-ID - Long-Chain-Aldehydes TYPES - Aldehydes COMMON-NAME - a long-chain aldehyde // UNIQUE-ID - Monoterpenals TYPES - Aldehydes TYPES - Monoterpene-Derivatives COMMON-NAME - a monoterpenal // UNIQUE-ID - ACETOIN TYPES - LONG-CHAIN-KETONE COMMON-NAME - acetoin COMMENT - Acetoin, along with diacetyl, is one of the compounds that gives butter its characteristic taste. /It is natuarally found in apples, butter, yogurt, asparagus, black currants, blackberry, wheat, broccoli, /brussels sprouts, and cantaloupe. /Many bacteria can grow on acetoin, some of which degrade it to acetaldehyde and acetyl-CoA /|CITS: [8110297]|. SYNONYMS - acetylmethylcarbinol SYNONYMS - 3-hydroxy-2-butanone SYNONYMS - dimethylketol SYNONYMS - 3-hydroxybutan-2-one // UNIQUE-ID - Hydroxyketones TYPES - LONG-CHAIN-KETONE COMMON-NAME - a hydroxyketone // UNIQUE-ID - Aliphatic-Diamines TYPES - Aliphatic-Amines COMMON-NAME - an aliphatic diamine COMMENT - This compound class collects various aliphatic diamines. SYNONYMS - aliphatic diamine // UNIQUE-ID - Aliphatic-Omega-Amino-Aldehydes TYPES - Aliphatic-Amines COMMENT - This compound class collects various aliphatic ω-aminoaldehydes. SYNONYMS - an aliphatic ω-aminoaldehyde SYNONYMS - aliphatic ω-aminoaldehyde SYNONYMS - an ω-aminoaldehyde SYNONYMS - ω-aminoaldehyde // UNIQUE-ID - Quaternary-Amines TYPES - Alkylamines COMMON-NAME - a quaternary amine // UNIQUE-ID - Aminated-Amine-Donors TYPES - Amine-Donors COMMON-NAME - an aminated amine donor SYNONYMS - an aminated amine acceptor // UNIQUE-ID - Deaminated-Amine-Donors TYPES - Amine-Donors COMMON-NAME - a deaminated amine donor SYNONYMS - a deaminated amine acceptor // UNIQUE-ID - Arylalkylamines TYPES - Aryl-Amines COMMON-NAME - an arylalkylamine // UNIQUE-ID - N-Hydroxy-Arylamines TYPES - Aryl-Amines COMMON-NAME - an N-hydroxy-arylamine COMMENT - This compound class stands for generic and unspecified N-hydroxy-arylamines. SYNONYMS - an N-hydroxyarylamine SYNONYMS - N-hydroxyarylamine // UNIQUE-ID - Diamines TYPES - Polyamines COMMON-NAME - a diamine // UNIQUE-ID - Acyl-homoserine-lactones TYPES - Amino-Acid-Derivatives TYPES - Gamma-lactones COMMON-NAME - an acyl-homoserine lactone // UNIQUE-ID - Acyl-homoserines TYPES - Amino-Acid-Derivatives COMMON-NAME - an acyl-L-homoserine // UNIQUE-ID - Aldoxime TYPES - Amino-Acid-Derivatives COMMON-NAME - an aldoxime // UNIQUE-ID - N-Acylated-Amino-Acids TYPES - Amino-Acid-Derivatives COMMON-NAME - an N-acyl-L-amino acid SYNONYMS - an N-acylated amino acid // UNIQUE-ID - N-Substituted-Amino-Acids TYPES - Amino-Acid-Derivatives COMMON-NAME - an N-substituted amino acid COMMENT - This compound class stands for N-substituted amino acids, where a group other than hydrogen /has replaced one of the hydrogens of the amine group. // UNIQUE-ID - S-Substituted-N-Acetyl-L-Cysteines TYPES - Amino-Acid-Derivatives COMMON-NAME - an N-acetyl-L-cysteine-S-conjugate SYNONYMS - an S-substituted-N-acetyl-L-cysteine // UNIQUE-ID - Alpha-Amino-Acids TYPES - Amino-Acids COMMON-NAME - an α amino acid COMMENT - This compound class contains αamino acids, that is, any molecule /that contains an amine and a carboxyl functional groups attached to the same carbon atom. / // UNIQUE-ID - Aromatic-Amino-Acids TYPES - Amino-Acids COMMON-NAME - an aromatic amino acid COMMENT - This class stands for amino acids whose side chain contains an aromatic ring. /It contains both α and non-α amino acids. // UNIQUE-ID - Basic-Amino-Acids TYPES - Amino-Acids COMMON-NAME - a basic amino acid // UNIQUE-ID - CPD-9973 TYPES - Amino-Acids COMMON-NAME - an eIF5A deoxyhypusine SYNONYMS - a protein deoxyhypusine SYNONYMS - a protein N6-(4-aminobutyl)-L-lysine // UNIQUE-ID - D-Amino-Acids TYPES - Amino-Acids COMMON-NAME - a D-amino acid COMMENT - This compound class stands for all D-amino acids. // UNIQUE-ID - L-Amino-Acids TYPES - Amino-Acids COMMON-NAME - an L-amino acid // UNIQUE-ID - Lanthionine-Isomers TYPES - Amino-Acids COMMON-NAME - a lanthionine isomer // UNIQUE-ID - Neutral-Amino-Acids TYPES - Amino-Acids COMMON-NAME - a neutral amino acid // UNIQUE-ID - Non-alpha-amino-acids TYPES - Amino-Acids COMMON-NAME - a non-α amino acid COMMENT - This compound class contains non-αamino acids, that is, any molecule /that contains an amine and a carboxyl functional groups, attached to different carbon atoms. // UNIQUE-ID - Non-polar-amino-acids TYPES - Amino-Acids COMMON-NAME - a non-polar amino acid COMMENT - This class stands for all of the non-polar amino acids. /It contains both α and non-α amino acids. // UNIQUE-ID - Polar-amino-acids TYPES - Amino-Acids COMMON-NAME - a polar amino acid COMMENT - This class stands for all of the polar amino acids. /The class contains both α and non-α amino acids. / /Amino acids with polar side groups form hydrogen bonds with water molecules, and are classified as /hydrophilic. Polar amino acids that have substituents carrying either negative or positive charges in /aqueous solution at neutral pH are strongly hydrophilic. / // UNIQUE-ID - Serines TYPES - Amino-Acids COMMON-NAME - (L) or (D)-serine // UNIQUE-ID - C-terminal-32-aminoacid-Peptides TYPES - Protein-Amino-Acids COMMON-NAME - a C terminal 32 aminoacid peptide // UNIQUE-ID - CPD-11500 TYPES - Protein-Amino-Acids COMMON-NAME - a protein L-carboxyglutamate SYNONYMS - peptidyl 4-carboxyglutamate // UNIQUE-ID - CPD-557 TYPES - Protein-Amino-Acids COMMON-NAME - a protein-Nw-(ADP-D-ribosyl)-L-arginine SYNONYMS - N2-(ADP-D-ribosyl)-L-arginine // UNIQUE-ID - CPD-6242 TYPES - Protein-Amino-Acids COMMON-NAME - a protein-O-(N-acetyl-D-glucosaminyl)hydroxyproline // UNIQUE-ID - EIF5A-HYPUSINE TYPES - Protein-Amino-Acids COMMON-NAME - an eIF5A-hypusine // UNIQUE-ID - ENZYME-S-SULFANYLCYSTEINE TYPES - Protein-Amino-Acids COMMON-NAME - a protein-S-sulfanylcysteine // UNIQUE-ID - PEPTIDE-FORMYLKYNURENINE TYPES - Protein-Amino-Acids COMMON-NAME - a protein formylkynurenine SYNONYMS - a peptide formylkynurenine // UNIQUE-ID - PEPTIDE-TRYPTOPHAN TYPES - Protein-Amino-Acids COMMON-NAME - a protein L-tryptophan SYNONYMS - a peptide tryptophan // UNIQUE-ID - Precursor-of-hydrogenase-3-with-C-term TYPES - Protein-Amino-Acids COMMON-NAME - a precursor of large subunit of hydrogenase 3 with C terminal 32 amino acids // UNIQUE-ID - Prot-Alanines TYPES - Protein-Amino-Acids COMMON-NAME - a protein L-alanine SYNONYMS - a peptidyl-L-alanine // UNIQUE-ID - PROT-CYS TYPES - Protein-Amino-Acids COMMON-NAME - a protein L-cysteine SYNONYMS - peptide cysteine SYNONYMS - peptidyl cysteine SYNONYMS - [enzyme]-cysteine SYNONYMS - protein-cysteine // UNIQUE-ID - Prot-Glycinamides TYPES - Protein-Amino-Acids COMMON-NAME - a protein glycinamide SYNONYMS - a peptidyl glycinamide // UNIQUE-ID - Protein-6-N-lipoyl-lysine TYPES - Protein-Amino-Acids COMMON-NAME - a protein 6-N-(lipoyl)lysine // UNIQUE-ID - Protein-6-N-octanoyl-lysine TYPES - Protein-Amino-Acids COMMON-NAME - a protein 6-N-(octanoyl)lysine // UNIQUE-ID - Protein-Amino-Acid-Methyl-Esters TYPES - Protein-Amino-Acids COMMON-NAME - a C-terminal protein amino acid methyl ester // UNIQUE-ID - Protein-D-serines TYPES - Protein-Amino-Acids COMMON-NAME - a protein D-serine // UNIQUE-ID - Protein-Glutamates TYPES - Protein-Amino-Acids COMMON-NAME - a protein L-glutamate // UNIQUE-ID - Protein-Glycines TYPES - Protein-Amino-Acids COMMON-NAME - a protein glycine // UNIQUE-ID - Protein-Histidines TYPES - Protein-Amino-Acids COMMON-NAME - a protein L-histidine SYNONYMS - a peptidyl L-histidine // UNIQUE-ID - Protein-hydroxyprolines TYPES - Protein-Amino-Acids COMMON-NAME - a protein hydroxyproline // UNIQUE-ID - Protein-L-Arginines TYPES - Protein-Amino-Acids COMMON-NAME - a protein L-arginine SYNONYMS - protein-L-arginine // UNIQUE-ID - Protein-L-Asparagine TYPES - Protein-Amino-Acids COMMON-NAME - a protein L-asparagine // UNIQUE-ID - Protein-L-Aspartates TYPES - Protein-Amino-Acids COMMON-NAME - a protein L-aspartate // UNIQUE-ID - PROTEIN-L-BETA-ISOASPARTATES TYPES - Protein-Amino-Acids COMMON-NAME - a protein L-β-isoaspartate COMMENT - This compound class stands for generic and unspecified protein L-β-aspartates. // UNIQUE-ID - PROTEIN-L-CITRULLINE TYPES - Protein-Amino-Acids COMMON-NAME - a protein-L-citrulline // UNIQUE-ID - Protein-L-glutamine TYPES - Protein-Amino-Acids COMMON-NAME - a protein-L-glutamine // UNIQUE-ID - Protein-L-lysine TYPES - Protein-Amino-Acids COMMON-NAME - a protein L-lysine // UNIQUE-ID - Protein-L-methionine TYPES - Protein-Amino-Acids COMMON-NAME - a protein L-methionine // UNIQUE-ID - Protein-L-serines TYPES - Protein-Amino-Acids COMMON-NAME - a protein L-serine // UNIQUE-ID - Protein-Phosphoserines TYPES - Protein-Amino-Acids COMMON-NAME - a protein L-serine phosphate SYNONYMS - a protein L-phosphoserine // UNIQUE-ID - Protein-Phosphothreonines TYPES - Protein-Amino-Acids COMMON-NAME - a protein L-threonine phosphate // UNIQUE-ID - Protein-S-methyl-L-cysteine TYPES - Protein-Amino-Acids COMMON-NAME - a protein-S-methyl-L-cysteine // UNIQUE-ID - Protein-tyrosine-O-sulfates TYPES - Protein-Amino-Acids COMMON-NAME - a protein L-tyrosine-O-sulfate // UNIQUE-ID - Protein-Tyrosines TYPES - Protein-Amino-Acids COMMON-NAME - a protein L-tyrosine COMMENT - This compound class stands for generic and unspecified protein tyrosines. SYNONYMS - a protein tyrosine SYNONYMS - protein tyrosine // UNIQUE-ID - Proteins-L-Threonines TYPES - Protein-Amino-Acids COMMON-NAME - a protein L-threonine // UNIQUE-ID - S-GERANYLGERANYL-PROTEIN TYPES - Protein-Amino-Acids COMMON-NAME - a S-geranylgeranyl protein // UNIQUE-ID - Thyroglobulin-aminoacrylates TYPES - Protein-Amino-Acids COMMON-NAME - [thyroglobulin]-aminoacrylate SYNONYMS - [thyroglobulin]-dehydroalanine // UNIQUE-ID - 6-Acetyl-Beta-D-Galactosides TYPES - Carbohydrate-Derivatives COMMON-NAME - a 6-acetyl-β-D-galactoside COMMENT - This compound class stands for generic and unspecified 6-acetyl-β-D-galactosides. SYNONYMS - a 6-acetyl-β-D-galactoside SYNONYMS - 6-acetyl-β-D-galactoside // UNIQUE-ID - Acetylated-Chitosans TYPES - Carbohydrate-Derivatives COMMON-NAME - a partly acetylated chitosan // UNIQUE-ID - Glycosides TYPES - Carbohydrate-Derivatives COMMON-NAME - a glycoside // UNIQUE-ID - NAcMur-Peptide-Undecaprenols TYPES - Carbohydrate-Derivatives COMMON-NAME - a N-acetylmuramoyl-pentapeptide-diphosphoundecaprenol SYNONYMS - lipid I // UNIQUE-ID - NUCLEOTIDE-SUGARS TYPES - Base-Derivatives TYPES - Carbohydrate-Derivatives COMMON-NAME - a nucleotide sugar // UNIQUE-ID - Oligosaccharide-Phosphate TYPES - Carbohydrate-Derivatives COMMON-NAME - an oligosaccharide phosphate COMMENT - This structure is one example of many oligosaccharide-phosphates. // UNIQUE-ID - Peptidoglycans TYPES - Carbohydrate-Derivatives COMMON-NAME - a peptidoglycan COMMENT - The bacterial bag-shaped envelope (sacculus) can resist turgor pressures of 2-5 atmpspheres in /Gram-negative bacteria, and up to 20 atm in Gram-positive bacteria. /This remarkable tensile strength, combined with elasticity, is acheived by the structure of the cell /wall's main component, peptidoglycan (also known as "basal structure", "mucopeptide", "glycopeptide", /"glycosaminopeptide" and "murein"). / /Peptidoglycan is best described as a fisherman net. The mesh of the net is made of two segments of /parallel, rather inextensible glycan threads, held together by two small elastic peptide crosslinks /allowing the net to expand or shrink |CITS: [10532377]|. // UNIQUE-ID - Sugar-Phosphate TYPES - Carbohydrate-Derivatives COMMON-NAME - a sugar phosphate COMMENT - This compound class stands for generic and unspecified sugar phosphates. // UNIQUE-ID - ADP-SUGARS TYPES - Purine-Related TYPES - NUCLEOTIDE-SUGARS COMMON-NAME - an ADP-sugar SYNONYMS - an ADP-sugar // UNIQUE-ID - CDP-SUGARS TYPES - Pyrimidine-Related TYPES - NUCLEOTIDE-SUGARS COMMON-NAME - a CDP-sugar // UNIQUE-ID - DTDP-SUGARS TYPES - Pyrimidine-Related TYPES - NUCLEOTIDE-SUGARS COMMON-NAME - a dTDP-sugar // UNIQUE-ID - GDP-SUGARS TYPES - Purine-Related TYPES - NUCLEOTIDE-SUGARS COMMON-NAME - a GDP-sugar // UNIQUE-ID - UDP-sugar TYPES - NUCLEOTIDE-SUGARS TYPES - Pyrimidine-Related COMMON-NAME - a UDP-sugar COMMENT - This compound class stands for generic and unspecified UDP-sugars. // UNIQUE-ID - 3-Acyl-pyruvates TYPES - Carbohydrates COMMON-NAME - a 3-acylpyruvate // UNIQUE-ID - Carbonyls TYPES - Carbohydrates COMMON-NAME - a carbonyl // UNIQUE-ID - Dialkyl-phosphates TYPES - Carbohydrates COMMON-NAME - a dialkyl phosphate // UNIQUE-ID - RH TYPES - Carbohydrates COMMON-NAME - an organic molecule // UNIQUE-ID - Sugar TYPES - Carbohydrates COMMON-NAME - a sugar COMMENT - This compound class stands for generic and unspecified sugars. // UNIQUE-ID - Lipopolysaccharides TYPES - Bacterial-Endotoxins TYPES - Polysaccharides COMMON-NAME - a lipopolysaccharide COMMENT - This compound class stands for generic and unspecified lipopolysaccharides. /Lipopolysaccharides are a major component of the outer membrane of Gram-negative bacteria. /While they are protecting the membrane from certain kinds of chemical attacks, they also /induce a strong response from animal immune systems. / /Lipopolysaccharides contain three parts: a lipid (lipid A), a core polysaccharide, and polysaccharide /(O) side chains. / /Lipid A, which is common to most Gram negatives, is the most toxic part. The core polysaccharide /is genus specific, and contains unusual 7-carbon and 8-carbon sugars, and the O side chains /are variable in structure and toxicity. / /The core polysaccharide usually consists of about 20-40 repeated subunits. SYNONYMS - a lipopolysaccharide SYNONYMS - lipopolysaccharide // UNIQUE-ID - Purine-Bases TYPES - Bases COMMON-NAME - a purine base SYNONYMS - purine base // UNIQUE-ID - Pyrimidine-Bases TYPES - Bases COMMON-NAME - a pyrimidine base SYNONYMS - pyrimidine base // UNIQUE-ID - 2-Deoxy-D-Ribosyl-Base TYPES - Nucleosides COMMON-NAME - a 2-deoxy-D-ribosyl-base // UNIQUE-ID - 5-Dephospho-DNA TYPES - Nucleosides COMMON-NAME - a 5'-Dephospho-DNA // UNIQUE-ID - 5-Phospho-DNA TYPES - Nucleosides COMMON-NAME - a 5'-phospho-DNA // UNIQUE-ID - D-Ribosyl-Base TYPES - Nucleosides COMMON-NAME - a D-ribosyl-base // UNIQUE-ID - dCpdG-DNAs TYPES - Nucleosides COMMON-NAME - a dCpdG DNA // UNIQUE-ID - Deoxy-Ribonucleosides TYPES - Nucleosides COMMON-NAME - a deoxynucleoside SYNONYMS - a 2'-deoxynucleoside SYNONYMS - a deoxyribonucleoside // UNIQUE-ID - Dinucleoside-polyphosphates TYPES - Nucleosides COMMON-NAME - a dinucleoside polyphosphate SYNONYMS - a dinucleoside oligophosphate // UNIQUE-ID - DNA-Cytosine TYPES - Nucleosides COMMON-NAME - a DNA cytosine // UNIQUE-ID - DNA-N4-Methylcytosine TYPES - Nucleosides COMMON-NAME - a DNA-N4-methylcytosine // UNIQUE-ID - METHYL-dCpdG-DNAs TYPES - Nucleosides COMMON-NAME - a methyl-dCpdG DNA // UNIQUE-ID - N-D-ribosylpyrimidines TYPES - Nucleosides COMMON-NAME - an N-D-ribosylpyrimidine SYNONYMS - Pyrimidine nucleoside // UNIQUE-ID - Ribonucleosides TYPES - Nucleosides COMMON-NAME - a ribonucleoside SYNONYMS - nucleoside // UNIQUE-ID - 2-Prime-Ribonucleoside-Monophosphates TYPES - Nucleotides COMMON-NAME - a nucleoside 2'-phosphate SYNONYMS - nucleoside-2'-phosphate SYNONYMS - nucleoside 2'-phosphate SYNONYMS - a 2'-ribonucleotide // UNIQUE-ID - 3-Prime-Ribonucleoside-Monophosphates TYPES - Nucleotides COMMON-NAME - a nucleoside 3'-phosphate SYNONYMS - nucleoside 3'-phosphate SYNONYMS - a 3'-ribonucleotide // UNIQUE-ID - Cyclic-Ribonucleoside-Monophosphates TYPES - Nucleotides COMMON-NAME - a nucleoside cyclic phosphate SYNONYMS - nucleoside cyclic phosphate // UNIQUE-ID - Deoxynucleotides TYPES - Nucleotides COMMON-NAME - a deoxynucleotide SYNONYMS - Deoxynucleotides // UNIQUE-ID - DNA-Combined-With-Exogenous-DNA TYPES - Nucleotides COMMON-NAME - DNA combined with exogenous DNA to form a recombinational junction // UNIQUE-ID - DNA-With-G-A-Mismatch TYPES - Nucleotides COMMON-NAME - DNA with G-A mismatch // UNIQUE-ID - DNA-With-Mismatched-Adenine TYPES - Nucleotides COMMON-NAME - DNA with removed adenine mismatch leaving an AP site // UNIQUE-ID - Nucleoside-Diphosphates TYPES - Nucleotides COMMON-NAME - a nucleoside diphosphate SYNONYMS - NDP // UNIQUE-ID - Nucleoside-Monophosphates TYPES - Nucleotides COMMON-NAME - a nucleoside monophosphate SYNONYMS - NMP // UNIQUE-ID - Nucleoside-Triphosphates TYPES - Nucleotides COMMON-NAME - a nucleoside triphosphate SYNONYMS - NTP // UNIQUE-ID - Resolution-of-Recombinational-Junction TYPES - Nucleotides COMMON-NAME - resolution of recombinational junction formation of two intact strands // UNIQUE-ID - Ribonucleotides TYPES - Nucleotides COMMON-NAME - a ribonucleotide // UNIQUE-ID - Stabilized-RecA-Filament-DNA-Complex TYPES - Nucleotides COMMON-NAME - a stabilized RecA filament-DNA complex // UNIQUE-ID - Unstable-RecA-Filament-DNA-Complex TYPES - Nucleotides COMMON-NAME - an unstable RecA filament-DNA complex // UNIQUE-ID - Uridine-Nucleotides TYPES - Nucleotides COMMON-NAME - a uridine nucleotide COMMENT - Uridine nucleotides are cofactors in the use of sugars for various biosynthetic processes in mammals and plants // UNIQUE-ID - N6-Alkylaminopurine TYPES - Purine-Related COMMON-NAME - an N6-alkylaminopurine // UNIQUE-ID - Purine-Nucleotides TYPES - Purine-Related // UNIQUE-ID - Purine-Ribonucleosides TYPES - Purine-Related COMMON-NAME - a purine ribonucleoside SYNONYMS - nebularine SYNONYMS - purine riboside SYNONYMS - an N-D-ribosyl-purine // UNIQUE-ID - Thiopurines TYPES - Purine-Related COMMON-NAME - a thiopurine // UNIQUE-ID - 5-Nitroisocytosine-Derivatives TYPES - Pyrimidine-Related COMMON-NAME - a 5-nitroisocytosine derivative // UNIQUE-ID - Benzylacylouridines TYPES - Pyrimidine-Related COMMON-NAME - a benzylacyclouridine // UNIQUE-ID - Pyrimidine-nucleotides TYPES - Pyrimidine-Related COMMON-NAME - a pyrimidine nucleotide SYNONYMS - a pyrimidine 5'-nucleotide // UNIQUE-ID - Pyrimidine-Ribonucleosides TYPES - Pyrimidine-Related COMMON-NAME - a pyrimidine nucleoside SYNONYMS - pyrimidine nucleoside // UNIQUE-ID - Uracil-Analogues TYPES - Pyrimidine-Related COMMON-NAME - a uracil analogue // UNIQUE-ID - CPD-11620 TYPES - Carboxamides COMMON-NAME - (R,S)-piperidine-2-carboxamide // UNIQUE-ID - CPD-11626 TYPES - Carboxamides COMMON-NAME - (R,S)-piperidine-3-carboxamide // UNIQUE-ID - CPD-11631 TYPES - Carboxamides COMMON-NAME - (R,S)-piperazine-2-tert-butylcarboxamide // UNIQUE-ID - CPD-11633 TYPES - Carboxamides COMMON-NAME - (R,S)-piperazine-2-carboxamide // UNIQUE-ID - Lignins TYPES - Aromatic-Polymers COMMON-NAME - a lignin // UNIQUE-ID - 2-Alkyl-Dinitrophenol-Derivatives TYPES - Aryl-Alcohol COMMON-NAME - a 2-alkyl-dinitrophenol derivative // UNIQUE-ID - Aromatic-Primary-Alcohols TYPES - Aryl-Alcohol COMMON-NAME - an aromatic primary alcohol COMMENT - The R group in this compounds structure contains an aromatic ring. // UNIQUE-ID - Aryl-beta-D-Glucosides TYPES - Aryl-Glucosides COMMON-NAME - an aryl β-D-glucoside // UNIQUE-ID - Erythro-GGE TYPES - Guaiacylglycerol-guaiacyl-ether COMMON-NAME - erythro-guaiacylglycerol-β-guaiacyl ether SYNONYMS - erythro-GGE // UNIQUE-ID - Threo-GGE TYPES - Guaiacylglycerol-guaiacyl-ether COMMON-NAME - threo-guaiacylglycerol-β-guaiacyl ether SYNONYMS - threo-GGE // UNIQUE-ID - Indole-Containing-Compounds TYPES - Indoles COMMON-NAME - an indole-containing compound // UNIQUE-ID - Indole-Derivatives TYPES - Indoles COMMON-NAME - an indole derivative // UNIQUE-ID - All-Biopterines TYPES - Coenzymes COMMON-NAME - a biopterin // UNIQUE-ID - Factor-420 TYPES - Coenzymes COMMON-NAME - cofactor F420 COMMENT - One of the distinguishing features of methanogenic bacteria is their blue-green fluorescence when irradiated with UV light. This fluorescence is due to F420, a cofactor that was identified on the basis of this feature. /This compound, named for its intense absorbance at 420 nm, was originally isolated by Cheeseman et al |CITS: [5079072]|, and later identified by Eirich et al as the N-(N-L-lactyl-γ-L-glutamyl)-L-glutamic acid phosphodiester of 7,8-didemethyl-8-hydroxy-5-deazariboflavin 5'-phosphate |CITS: [728375]|. / /The F420 biosynthetic pathway produces the intermediate F420-0, which contains no glutamate side chains. /Glutamates are then added by several enzymes. F420 molecules isolated from different organisms differ in the number of the glutamate molecules in the side chains, as well as the nature of the bond (which could be either α or γ) |CITS: [12909715][12867481][11717263]|. // UNIQUE-ID - FeS-Centers TYPES - Coenzymes COMMON-NAME - an iron-sulfur cluster COMMENT - Iron-sulfur centers consist of nonheme iron complexed to sulfur in several ways. /Iron-sulfur clusters are prosthetic groups of many proteins, which function as intracellular electron carriers /with a low reduction potential. /In addition to their roles in electron transfer reactions, iron-sulfur clusters are also known to participate in /the activation of substrates, the stabilization of radicals and structures, the protection of proteins from enzymes /and the storage of iron and sulfur. /In addition, they act as sensors of iron, dioxygen, the superoxide ion, and possibly nitric oxide, and participate /in gene expression |CITS: [16466637]|. SYNONYMS - an iron-sulfur center // UNIQUE-ID - Methanofurans TYPES - Coenzymes COMMON-NAME - methanofuran COMMENT - Methanofurans are a group of related carbon-carrier cofactors involved in the first step of the /methanogenic reduction of |FRAME: CARBON-DIOXIDE|. /Methanofurans react with |FRAME: CARBON-DIOXIDE| to form the carbamate /N-carboxymethanofuran. /The formylmethanofuran dehydrogenase enzyme then reduces this carbamate to /|FRAME: Formyl-methanofurans|. / /Methanofurans are the only cofactors known to contain a furan moiety, although furans have been /identified in polyketides and fatty acid derived natural products, and are often formed during the heating /or oxidation of carbohydrates |CITS: [12013276]|. / /There are at least five chemically different methanofurans, including |FRAME:METHANOFURAN|, /|FRAME:CPD-7628| and |FRAME:CPD-7629| |CITS: [2115763]|. / SYNONYMS - 4-[N-(4,5,7-tricarboxyheptanoyl-γ-L-glutamyl-γ-L-glutamyl-)-p-(β-aminoethyl)phenoxy-methyl]-2-(aminomethyl)furan // UNIQUE-ID - 5-FORMYL-THF-GLU-N TYPES - All-Folates COMMON-NAME - an N5-formyl-tetrahydrofolate // UNIQUE-ID - 5-METHYL-THF-GLU-N TYPES - All-Folates COMMON-NAME - an N5-methyl-tetrahydrofolate // UNIQUE-ID - Folatepolyglutamate-n TYPES - All-Folates COMMON-NAME - a folylpolyglutamate(n) // UNIQUE-ID - FORMYL-THF-GLU-N TYPES - All-Folates COMMON-NAME - an N10-formyl-tetrahydrofolate // UNIQUE-ID - METHYLENE-THF-GLU-N TYPES - All-Folates COMMON-NAME - a 5,10-methylene-tetrahydrofolate SYNONYMS - methylene-H4PteGlu(n) SYNONYMS - methylene-THF(glu)n SYNONYMS - methylene-H4PteGlun SYNONYMS - methylene-tetrahydropteroylpolyglutamates // UNIQUE-ID - THF-GLU-N TYPES - All-Folates COMMON-NAME - a tetrahydrofolate polyglutamate SYNONYMS - THF(glu)n SYNONYMS - H4PteGlun SYNONYMS - tetrahydropteroylpolyglutamate SYNONYMS - THF SYNONYMS - THF polyglutamate // UNIQUE-ID - Fructo-Fructofuranosyl-Acceptors TYPES - Fructofuranosyl-Acceptors COMMON-NAME - a fructofuranosylated fructofuranosyl acceptor // UNIQUE-ID - Non-Fructo-Fructofuranosyl-Acceptors TYPES - Fructofuranosyl-Acceptors COMMON-NAME - a non fructofuranosylated fructofuranosyl acceptor // UNIQUE-ID - Galactosylated-Galactose-Acceptors TYPES - Galactosyl-Acceptors COMMON-NAME - a galactosylated galactose acceptor // UNIQUE-ID - Non-Galactosylated-Galactose-Acceptors TYPES - Galactosyl-Acceptors COMMON-NAME - a non galactosylated galactose acceptor // UNIQUE-ID - Glucosylated-Glucose-Acceptors TYPES - Glucosyl-Acceptors COMMON-NAME - a glucosylated glucose acceptor SYNONYMS - a glucosylated glucose donor // UNIQUE-ID - Non-Glucosylated-Glucose-Acceptors TYPES - Glucosyl-Acceptors COMMON-NAME - a non glucosylated glucose acceptor SYNONYMS - a non glucosylated glucose donor // UNIQUE-ID - Glucuronosylated-Glucuronoside-Acceptors TYPES - Glucuronoside-Acceptors COMMON-NAME - a glucuronosylated glucuronoside acceptor // UNIQUE-ID - Non-Glucur-Glucuronoside-Acceptors TYPES - Glucuronoside-Acceptors COMMON-NAME - a non-glucuronosylated glucuronoside acceptor // UNIQUE-ID - Non-Glutamylated-Glutamyl-Acceptors TYPES - Glutamyl-Acceptors COMMON-NAME - a non-glutamylated glutamyl acceptor // UNIQUE-ID - Demethylated-methyl-acceptors TYPES - Methyl-Acceptors COMMON-NAME - a demethylated methyl acceptor SYNONYMS - a demethylated methyl donor // UNIQUE-ID - Methylated-methyl-acceptors TYPES - Methyl-Acceptors COMMON-NAME - a methylated methyl acceptor SYNONYMS - a methylated methyl donor // UNIQUE-ID - Non-Rhamonsylated-Rhamnosyl-Acceptors TYPES - Rhamonsyl-Acceptors COMMON-NAME - a non rhamnosylated rhamnosyl acceptor SYNONYMS - a non rhamnosylated rhamnosyl donor // UNIQUE-ID - Rhamonsylated-Rhamonsyl-Acceptors TYPES - Rhamonsyl-Acceptors COMMON-NAME - a rhamonsylated rhamnosyl acceptor SYNONYMS - a rhamnosylated rhamnosyl donor // UNIQUE-ID - Sulfurated-Sulfur-Acceptors TYPES - Sulfur-Acceptors COMMON-NAME - a sulfurated sulfur donor COMMENT - The class stands for general sulfur donor molecules. SYNONYMS - a sulfurated sulfur acceptor // UNIQUE-ID - Unsulfurated-Sulfur-Acceptors TYPES - Sulfur-Acceptors COMMON-NAME - an unsulfurated sulfur acceptor SYNONYMS - an unsulfurated sulfur donor // UNIQUE-ID - Fatty-Acid-Methyl-Esters TYPES - Carboxylic-esters COMMON-NAME - a fatty acid methyl ester // UNIQUE-ID - Glycosyl-Esters TYPES - Carboxylic-esters COMMON-NAME - a glycosyl ester // UNIQUE-ID - Long-Chain-Acyl-Ethyl-Esters TYPES - Carboxylic-esters COMMON-NAME - a long-chain-fatty-acyl ethyl ester // UNIQUE-ID - Diacylglycerides TYPES - Glycerides COMMON-NAME - a diacylglycerol SYNONYMS - a diglyceride // UNIQUE-ID - Monoacylglycerols TYPES - Glycerides COMMON-NAME - a monoacylglycerol SYNONYMS - a monoglyceride // UNIQUE-ID - Triacylglycerols TYPES - Glycerides COMMON-NAME - a triacylglycerol SYNONYMS - a triglyceride // UNIQUE-ID - Beta-lactones TYPES - Lactones COMMON-NAME - a β-lactone // UNIQUE-ID - CPD-8574 TYPES - Lactones COMMON-NAME - a 1,4-lactone // UNIQUE-ID - Delta-lactones TYPES - Lactones COMMON-NAME - a δ-lactone // UNIQUE-ID - Epsilon-lactones TYPES - Lactones COMMON-NAME - an ε-lactone // UNIQUE-ID - Gamma-lactones TYPES - Lactones COMMON-NAME - a γ-lactone // UNIQUE-ID - 3-Beta-Hydroxysterol-Esters TYPES - Steryl-Esters COMMON-NAME - a 3-β-hydroxysterol ester // UNIQUE-ID - All-Coas TYPES - Thioesters COMMON-NAME - a CoA derivative // UNIQUE-ID - Medium-Chain-Esters TYPES - Wax-Esters COMMON-NAME - a medium-chain ester // UNIQUE-ID - 1-5-Galactofuran TYPES - Galactofuran COMMON-NAME - a galactofuran ending with a galactofuranosyl (1->5) linkage SYNONYMS - a β-D-Galf-(1->5)-β-(D-Galf)n-Rha-GlcNAc-P-P-C50 // UNIQUE-ID - 1-6-Galactofuran TYPES - Galactofuran COMMON-NAME - a galactofuran ending with a galactofuranosyl (1->6) linkage SYNONYMS - a β-D-Galf-(1->6)-β-(D-Galf)n-Rha-GlcNAc-P-P-C50 // UNIQUE-ID - Acyl-Group TYPES - Simple-Groups COMMON-NAME - an acyl group // UNIQUE-ID - ACYLCHLORIDE TYPES - Chlorides COMMON-NAME - an acylchloride // UNIQUE-ID - Abscisic-Acid TYPES - Plant-Hormones TYPES - Sesquiterpenes COMMON-NAME - abscisic acid // UNIQUE-ID - Gibberellins TYPES - Diterpenes TYPES - Plant-Hormones COMMON-NAME - a gibberellin // UNIQUE-ID - Jasmonates TYPES - Plant-Hormones COMMON-NAME - a jasmonate COMMENT - This class includes a large set of compounds that are cyclopentanone derivatives. The term "jasmonic acid" /(and hence, "jasmonate") can also be used to apply more narrowly to one specific compound /(see |FRAME: Jasmonic-Acids|) that can exist as 4 different stereoisomers. // UNIQUE-ID - 24-Epibrassinolide-Sulfates TYPES - Brassinosteroids COMMON-NAME - a 24-epibrassinolide sulfate COMMENT - Sulfated brassinosteroids, including 24-epibrassinolide-sulfate can be produced in vitro, but the single sulfate group present on these compounds may be added at one of several different positions |CITS: [17039368]|, represented by "R" groups on this compound. Brassinosteroid sulfates have not been detected in vivo in plants to date, but, there is some indirect evidence for their existence |CITS: [Yokota92]|. // UNIQUE-ID - 24-Epicathasterone-Sulfates TYPES - Brassinosteroids COMMON-NAME - a 24-epicathasterone sulfate COMMENT - Sulfated brassinosteroids can be produced in vitro, but the single sulfate group present on these compounds may be added at one of two different positions |CITS: [17039368]|, represented by "R" groups on this compound. Brassinosteroid sulfates have not been detected in vivo in plants to date, but, there is some indirect evidence for their existence |CITS: [Yokota92]|. // UNIQUE-ID - 28-Homobrassinosteroid-Sulfates TYPES - Brassinosteroids COMMON-NAME - a (22R,23R)-28-homobrassinolide sulfate COMMENT - Sulfated brassinosteroids can be produced in vitro, but the single sulfate group present on these compounds may be added at one of several different positions |CITS: [17039368]|, represented by "R" groups on this compound. Brassinosteroid sulfates have not been detected in vivo in plants, but, there is some indirect evidence for their existence |CITS: [Yokota92]|. / SYNONYMS - a B-homo-7-oxastigmastan-6-one, 2,3,22,23-tetrahydroxy-, (2α,3α,5α,22R,23R)-sulfate // UNIQUE-ID - 28-Homocastasterone-Sulfates TYPES - Brassinosteroids COMMON-NAME - a (22R,23R)-28-homocastasterone sulfate COMMENT - Sulfated brassinosteroids can be produced in vitro, but the single sulfate group present on these compounds may be added at one of several different positions |CITS: [17039368]|, represented by "R" groups on this compound. Brassinosteroid sulfates have not been detected in vivo in plants, but, there is some indirect evidence for their existence |CITS: [Yokota92]|. // UNIQUE-ID - Brassinolide-Sulfates TYPES - Brassinosteroids COMMON-NAME - a brassinolide sulfate COMMENT - Sulfated brassinosteroids, including brassinolide-sulfate, can be produced in vitro, but the single sulfate group present on these compounds may be added at one of several different positions |CITS: [17039368]|, represented by "R" groups on this compound. Brassinosteroid sulfates have not been detected in vivo in plants to date, but, there is some indirect evidence for their existence |CITS: [Yokota92]|. SYNONYMS - BL sulfate // UNIQUE-ID - Castasterone-Sulfates TYPES - Brassinosteroids COMMON-NAME - a castasterone-sulfate COMMENT - Sulfated brassinosteroids, including castasterone-sulfate can be produced in vitro, but the single sulfate group present on these compounds may be added at one of several different positions |CITS: [17039368]|, represented by "R" groups on this compound. Brassinosteroid sulfates have not been detected in vivo in plants to date, but, there is some indirect evidence for their existence |CITS: [Yokota92]|. // UNIQUE-ID - Alkenes TYPES - Olefins COMMON-NAME - an alkene COMMENT - Alkenes are acyclic hydrocarbons with one carbon-carbon double bond. // UNIQUE-ID - Pyoverdines TYPES - Catecholate-siderophores TYPES - Hydroxamate-siderophores COMMON-NAME - a pyoverdine COMMENT - Pyoverdines are a group of structurally related siderophores produced by fluorescent Pseudomonas species, in which they provide the primary iron uptake system. / /Even though the structures of more than 50 different pyoverdines from different strains and species of Pseudomonas have been determined, they all possess similar structure composed of three parts: a conserved fluorescent dihydroxyquinoline chromophore, an acyl side chain (either dicarboxylic acid or amide) bound to the amino group of the chromophore, and a variable peptide chain linked by an amide group bound to the C1 (rarely C3) carboxyl group of the chromophore |CITS: [17118662]|. // UNIQUE-ID - Aminoalkylphosphinates TYPES - Anions COMMON-NAME - an aminoalkylphosphinate // UNIQUE-ID - Phosphates TYPES - Anions COMMON-NAME - an inorganic phosphate // UNIQUE-ID - Divalent-Cations TYPES - Cations COMMON-NAME - a divalent cation // UNIQUE-ID - Polycations TYPES - Cations COMMON-NAME - a polycation // UNIQUE-ID - Heavy-Metal-Ions TYPES - Metal-Ions COMMON-NAME - a heavy metal ion // UNIQUE-ID - FATTY-ACIDS-AND-CONJUGATES TYPES - FATTY-ACYLS COMMON-NAME - a fatty acid and conjugate // UNIQUE-ID - Ether-linked-phospholipids TYPES - Phospholipids COMMON-NAME - a phospholipid containing an ether-linked hydrocarbon // UNIQUE-ID - Lysophospholipids TYPES - Phospholipids COMMON-NAME - a lysophospholipid COMMENT - |FRAME:Lysophospholipids| is a phospholipid in which one of the fatty acids is replaced with a hydroxyl /group. /The hydroxyl group may be on carbon 1, in which case the name of the compound starts with 1-lyso-, /or on carbon 2, in which case the compound name will contain 2-lyso. /In the diagram we represent the structure of a 2-lyso-phospholipid. // UNIQUE-ID - Phosphoglycerides TYPES - Phospholipids COMMON-NAME - a phosphoglyceride COMMENT - Phosphoglycerides are a class of phospholipids based on a glycerol backbone, where the carboxyl /group of each of the two fatty acids is esterified to the hydroxyl groups on carbon-1 and carbon-2 of the /glycerol backbone, and the phosphate group is attached to carbon-3 by an ester link. If the phosphate /group is not modified, the compound is referred to as |FRAME:L-PHOSPHATIDATE|. / SYNONYMS - a glycerophospholipid // UNIQUE-ID - CIS-TRANS-POLYISOPRENYL-P TYPES - Polyisoprenoids COMMON-NAME - a cis,trans-polyisoprenyl phosphate COMMENT - For polyisoprenols and polyisoprenyl phosphates nomenclature, see |FRAME: Polyisoprenoids|. SYNONYMS - a cis,trans-polyisoprenyln-P // UNIQUE-ID - Polyisoprenyl-Diphosphates TYPES - Polyisoprenoids COMMON-NAME - a polyisoprenyl diphosphate COMMENT - For polyisoprenols and polyisoprenyl phosphates nomenclature, see |FRAME: Polyisoprenoids|. // UNIQUE-ID - TRANS-POLYISOPRENYL-P TYPES - Polyisoprenoids COMMON-NAME - an all-trans-polyisoprenyl phosphate COMMENT - For polyisoprenols and polyisoprenyl phosphates nomenclature, see |FRAME: Polyisoprenoids|. SYNONYMS - a trans-polyisoprenyln-P // UNIQUE-ID - Ceramides TYPES - Sphingosines COMMON-NAME - a ceramide SYNONYMS - an N-acylsphingosine SYNONYMS - N-acylsphingosine SYNONYMS - a ceramide SYNONYMS - ceramide // UNIQUE-ID - Sphingomyelins TYPES - Sphingosines COMMON-NAME - a sphingomyelin // UNIQUE-ID - Bacteriochlorins TYPES - Chlorins COMMON-NAME - a bacteriochlorin COMMENT - A bacteriochlorin is a large heterocyclic aromatic ring consisting, at the core, of 2 pyrroles and 2 /reduced pyrrole coupled through 4 methine linkages. /Bacteriochlorins are still aromatic, but they are less aromatic than porphyrins and chlorins. // UNIQUE-ID - Chlorophylls TYPES - Chlorins COMMON-NAME - a chlorophyll COMMENT - Chlorophyll is a green pigment found in most plants, algae, and cyanobacteria. /The name is derived from Greek (chloros "green" and phyllon "leaf". /Chlorophyll absorbs light strongly in the blue and red spectra and has a strong green color. /Chlorophylls play a crucial role in photosynthesis, both in the antennae and in the reaction centers. /By far most of the chlorophylls are found in the antennae, where they absorb light and transfer that light /energy by resonance energy transfer to the reaction center. /Some of the cholorophylls (known as P700 and P680) are part of the photosystems reaction centers, /where they perform the charge separation reaction, sending electrons to a transfer chain that ultimately /results in the reduction of |FRAME: NADP| to |FRAME: NADPH|. // UNIQUE-ID - Hemes TYPES - Porphyrins COMMON-NAME - heme // UNIQUE-ID - Chelate-Complexes TYPES - Chelators COMMON-NAME - a chelate-complex // UNIQUE-ID - CPD-10301 TYPES - DIPEPTIDES COMMON-NAME - [L-Asp(4-L-Arg)] dipeptide COMMENT - This is the basic unit of the polymer |FRAME: Cyanophycin|. SYNONYMS - N-β-aspartylarginine SYNONYMS - [L-4-(L-arginin-2-N-yl)aspartate // UNIQUE-ID - D-5-Monosubstituted-Hydantoins TYPES - Imidazolidines COMMON-NAME - a D-5-monosubstituted hydantoin // UNIQUE-ID - L-5-Monosubstituted-Hydantoins TYPES - Imidazolidines COMMON-NAME - an L-5-monosubstituted hydantoin // UNIQUE-ID - Tetrahydropyridines TYPES - Pyridines COMMON-NAME - a tetrahydropyridine // UNIQUE-ID - CPD-9998 TYPES - Phosphinates COMMON-NAME - phosphinothricin COMMENT - |FRAME: L-PHOSPHINOTHRICIN| is a nonproteinogenic amino acid that is a structural glutamate analogue. As such, it is a potent inhibitor of glutamine synthetase, an enzyme central to nitrogen regulation in some plant cell types, making it an effective and widely used herbicide, found in several nonselective systemic herbicides, such as Basta, Rely, Finale, Challenge and Liberty |CITS: [5010035][Lea84]|. /|FRAME: L-PHOSPHINOTHRICIN| is the only known naturally occurring compound in which the C-P-C bond motif is found. Phosphinothricin is produced by at least three species of actinomycetes as a component of non-ribosomally synthesized peptides. These include |FRAME: CPD-11749|, produced by |FRAME: TAX-2065| |CITS: [6480502]| and |FRAME: CPD-10013| (PTT), also known as bialaphos, which is produced by |FRAME: ORG-6106| |CITS: [7166539]| and |FRAME: TAX-591159| |CITS: [5010035]|. SYNONYMS - DL-phosphinothricin SYNONYMS - glufosinate // UNIQUE-ID - Hydroxyacyl-glutathiones TYPES - All-Glutathiones COMMON-NAME - a hydroxyacyl glutathione // UNIQUE-ID - Aliphatic-Sulfonates TYPES - SULFONATES COMMON-NAME - an aliphatic sulfonate COMMENT - This compound class stands for generic and unspecified aliphatic sulfonate compounds. // UNIQUE-ID - CPD-11797 TYPES - SULFONATES COMMON-NAME - 2-O-sulfolactate SYNONYMS - 2-O-sulfolactic acid // UNIQUE-ID - RS-3-Sulfolactate TYPES - SULFONATES COMMON-NAME - (RS)-3-sulfolactate // UNIQUE-ID - Alkyl-Thiols TYPES - Thiols COMMON-NAME - an alkyl-thiol // UNIQUE-ID - Disulfides TYPES - Thiols COMMON-NAME - a disulfide // UNIQUE-ID - Perthiols TYPES - Thiols COMMON-NAME - a perthiol // UNIQUE-ID - Polysulfides TYPES - Thiols COMMON-NAME - a polysulfide // UNIQUE-ID - Protein-Disulfides TYPES - Thiols COMMON-NAME - a protein disulfide // UNIQUE-ID - Protein-Dithiols TYPES - Thiols COMMON-NAME - a protein dithiol // UNIQUE-ID - Thio-Ethers TYPES - Thiols COMMON-NAME - a thioether // UNIQUE-ID - Damaged-DNA-Pyrimidine TYPES - Damaged-DNA COMMON-NAME - a damaged DNA pyrimidine // UNIQUE-ID - DNA-with-Alkylated-Adenines TYPES - DNA-Adenines COMMON-NAME - a DNA with alkylated adenine // UNIQUE-ID - DNA-containing-a-Apyrimidinic-Sites TYPES - DNA-containing-abasic-Sites COMMON-NAME - a DNA containing a apyrimidinic site COMMENT - A site on DNA where a pyrimidine (either cytosine or thymine) is missing, but the phosphodiester backbone of the DNA is still intact // UNIQUE-ID - DNA-containing-a-Purinic-Sites TYPES - DNA-containing-abasic-Sites COMMON-NAME - a DNA containing a purinic site COMMENT - A site on DNA where a purine (either adenine or guanine) is missing, but the phosphodiester backbone of the DNA is still intact // UNIQUE-ID - Quinones TYPES - Membrane-Electron-Carriers COMMON-NAME - a quinone SYNONYMS - quinone // UNIQUE-ID - Reduced-Quinones TYPES - Membrane-Electron-Carriers COMMON-NAME - a quinol COMMENT - A hydroquinone is the fully reduced form of |FRAME: Quinones|. SYNONYMS - a hydroquinone SYNONYMS - a reduced quinone // UNIQUE-ID - Menaquinones TYPES - CPD-11501 TYPES - Quinones COMMON-NAME - a menaquinone COMMENT - Menaquinones and demethylmenaquinones are isoprenoid quinones of the naphthalene series, and are constituents of /bacterial plasma membranes, where they play important roles in electron transfer and oxidative phosphorylation. /Menaquinones and demethylmenaquinones are named MK-n or DMK-n, respectively, where the n /refers to the number of prenyl units present in the side chain. /The most common length of the side chain in bacteria is 8, although minor amounts of MK-1 through /MK-14 have been found |CITS: [7022156]|. / /Menaquinones are also known as vitamin K2. Vitamin K is a name given to a group of derivatives of 2-methyl-1,4-naphthoquinone that are required by mammals for the posttranslational modification of certain proteins, mostly involved in blood coagulation. These compounds, while essential for mammals, are not synthesized by them, and are thus considered vitamins. / /The natural forms of the vitamin are vitamin K1 (|FRAME: 2-METHYL-3-PHYTYL-14-NAPHTHOQUINONE|) and vitamin K2 (|FRAME: Menaquinones "menaquinone"|). Since menaquinones produced by different organisms have different tail lenghts there are many variations of vitamin K2, usually specified based on the number of carbons in their tails, such as in Vitamin K2(45). / /The reduced form of menaquinone is called |FRAME: Menaquinols|. SYNONYMS - a vitamin K2 // UNIQUE-ID - Glycoalkaloids TYPES - ALKALOID COMMON-NAME - a glycoalkaloid // UNIQUE-ID - 7-hydroxyisoflavonoids TYPES - Flavonoids COMMON-NAME - a 7-hydroxyisoflavonoid // UNIQUE-ID - Anthocyanidins TYPES - Flavonoids COMMON-NAME - an anthocyanidin // UNIQUE-ID - Anthocyanins TYPES - Flavonoids COMMON-NAME - an anthocyanin // UNIQUE-ID - AURONE TYPES - Flavonoids COMMON-NAME - an aurone // UNIQUE-ID - Chalcones TYPES - Flavonoids COMMON-NAME - a chalcone // UNIQUE-ID - CPD-11512 TYPES - Flavonoids COMMON-NAME - a leucoanthocyanidin SYNONYMS - flavan-3, 4 -diol // UNIQUE-ID - Dihydroflavonols TYPES - Flavonoids COMMON-NAME - a dihydroflavonol // UNIQUE-ID - Flavan-3-ols TYPES - Flavonoids COMMON-NAME - a flavan-3-ol // UNIQUE-ID - FLAVANONES TYPES - Flavonoids COMMON-NAME - a flavanone // UNIQUE-ID - Flavones TYPES - Flavonoids COMMON-NAME - a flavone // UNIQUE-ID - Flavonols TYPES - Flavonoids COMMON-NAME - a flavonol // UNIQUE-ID - Isoflavones TYPES - Flavonoids COMMON-NAME - an isoflavone SYNONYMS - Isoflavones // UNIQUE-ID - PTEROCARPANS TYPES - Flavonoids COMMON-NAME - a pterocarpan // UNIQUE-ID - CAFFEATE TYPES - Phenylpropanoids COMMON-NAME - caffeate SYNONYMS - caffeic acid // UNIQUE-ID - Coumarins TYPES - Phenylpropanoids COMMON-NAME - a coumarin // UNIQUE-ID - HYDROLYZED-TANNIN TYPES - Phenylpropanoids COMMON-NAME - a hydrolyzable tannin // UNIQUE-ID - LIGNAN TYPES - Phenylpropanoids COMMON-NAME - a lignan // UNIQUE-ID - Catecholate-siderophores TYPES - Siderophore COMMON-NAME - a catecholate siderophore // UNIQUE-ID - Thiazoline-siderophores TYPES - Siderophore COMMON-NAME - a thiazoline siderophore // UNIQUE-ID - Diterpenes TYPES - Terpenoids COMMON-NAME - a diterpenoid SYNONYMS - Diterpenes // UNIQUE-ID - Homoterpenoids TYPES - Terpenoids COMMON-NAME - a homoterpenoid SYNONYMS - a homoterpene // UNIQUE-ID - Monoterpenes TYPES - Terpenoids COMMON-NAME - a monoterpenoid SYNONYMS - Monoterpenes // UNIQUE-ID - Sesquiterpenes TYPES - Terpenoids COMMON-NAME - a sesquiterpenoid SYNONYMS - Sesquiterpenes // UNIQUE-ID - Terpenoid-Derivatives TYPES - Terpenoids COMMON-NAME - a terpenoid derivative // UNIQUE-ID - Tetraterpenes TYPES - Terpenoids COMMON-NAME - a tetraterpenoid SYNONYMS - Tetraterpenes // UNIQUE-ID - Triterpenes TYPES - Terpenoids COMMON-NAME - a triterpenoid SYNONYMS - Triterpenes // UNIQUE-ID - BITTER-ACIDS TYPES - Terpenophenolics COMMON-NAME - a bitter acid SYNONYMS - a prenylated acylphloroglucinol // UNIQUE-ID - CANNABINOIDS TYPES - Terpenophenolics COMMON-NAME - a cannabinoid // UNIQUE-ID - Antibiotics TYPES - Xenobiotic COMMON-NAME - an antibiotic // UNIQUE-ID - 11-Beta-Hydroxysteroids1 TYPES - Hydroxysteroids COMMON-NAME - an 11-β-hydroxysteroid // UNIQUE-ID - 17-Alpha-Hydroxysteroids TYPES - Hydroxysteroids COMMON-NAME - a 17-α-hydroxysteroid // UNIQUE-ID - 21-Hydroxysteroids TYPES - Hydroxysteroids COMMON-NAME - a 21-hydroxysteroid // UNIQUE-ID - 3b-hydroxy-D5-steroids TYPES - Hydroxysteroids COMMON-NAME - a 3β-hydroxy-δ5-steroid // UNIQUE-ID - 7-Beta-Hydroxysteroids TYPES - Hydroxysteroids COMMON-NAME - a 7-β-hydroxysteroid // UNIQUE-ID - 11-Oxosteroids TYPES - Oxosteroids COMMON-NAME - an 11-oxosteroid // UNIQUE-ID - 3-Oxosteroids TYPES - Oxosteroids COMMON-NAME - a 3-oxosteroid // UNIQUE-ID - 7-Oxosteroids TYPES - Oxosteroids COMMON-NAME - a 7-oxosteroid // UNIQUE-ID - 3-Beta-Hydroxysterols TYPES - Sterols COMMON-NAME - a 3-β-hydroxysterol // UNIQUE-ID - O-Glucosylsterols TYPES - Sterols COMMON-NAME - an O-glucosylsterol SYNONYMS - a sterol 3-b-D-glucoside SYNONYMS - a sterol 3-β-D-glucoside // UNIQUE-ID - Phospho-3-Methyl-2-Oxobut-Dehydrogenases TYPES - 3-Methyl-2-Oxobut-Dehydrogenases COMMON-NAME - a phosphorylated-3-methyl-2-oxobutanoate dehydrogenase // UNIQUE-ID - a-proteasome-endopeptidase-complex TYPES - a-proteasome COMMON-NAME - a proteasome endopeptidase complex // UNIQUE-ID - Branched-chain-2-keto-acid-deH-P TYPES - Branched-chain-2-keto-acid-deHase COMMON-NAME - a phosphorylated branched-chain 2-keto acid dehydrogenase SYNONYMS - [3-methyl-2-oxobutanoate dehydrogenase (acetyl-transferring)] phosphate // UNIQUE-ID - Methylated-corrinoid-Fe-S-Proteins TYPES - Co-E-Clth COMMON-NAME - a methylated corrinoid Fe-S protein // UNIQUE-ID - ETF-REDUCED TYPES - Etf COMMON-NAME - a reduced electron transferring flavoprotein COMMENT - Electron-transferring flavoproteins (ETF) are classified into two groups. / /One group includes ETFs from mammals, the methylotrophic bacterium |FRAME: TAX-2327|, and the soil /bacterium |FRAME: TAX-266|. /These ETFs are heterodimeric, contain one non-covalently bound FAD and one AMP per molecule, /and function as electron carriers between other flavoproteins such as acyl-CoA dehydrogenases, /|FRAME: CPLX-6421|, ETF-CoQ oxidoreductase, and |FRAME: CPLX-7462|, depending on /the source species. / /The other group includes the ETF from an anaerobic bacterium, |FRAME: TAX-907|. /This ETF is also a heterodimer but contains two FAD molecules. The presence of AMP has not been reported. /The function of |FRAME: TAX-907| ETF is to transfer electrons between flavoproteins, |FRAME: CPLX-5242| /(DLDH) and |FRAME: CPLX-7036| (BCD), and additionally to oxidize NADH |CITS: [14688238]|. SYNONYMS - reduced ETF SYNONYMS - electron transfer flavoprotein, reduced SYNONYMS - ETFH2 // UNIQUE-ID - Ferrihemoglobins TYPES - Hemoglobins COMMON-NAME - a ferrihemoglobin COMMENT - |FRAME: Ferrihemoglobins "Ferrihemoglobin"| is form of |FRAME: Hemoglobins "hemoglobin"| in which the iron in the heme group is in the |FRAME:FE+3| state. This form can not bind oxygen. SYNONYMS - a methemoglobin // UNIQUE-ID - Ferrohemoglobins TYPES - Hemoglobins COMMON-NAME - a ferrohemoglobin COMMENT - |FRAME: Ferrohemoglobins "Ferrohemoglobin"| is form of |FRAME: Hemoglobins "hemoglobin"| in which the iron in the heme group is in the |FRAME:FE+2| state. This is the active form of the protein that an bind oxygen. Upon binding, the iron is oxidized to |FRAME:FE+3|. // UNIQUE-ID - DEACETYL-CITRATE-LYASE TYPES - HOLO-CITRATE-LYASE COMMON-NAME - a [citrate (pro-3S)-lyase](thiol form) COMMENT - Citrate lyase, an anaerobic enzyme, catalyzes the cleavage of citrate to acetate and oxaloacetate /|CITS: [6354265]|. The citrate molecule is very stable, and needs to be activated prior to cleavage by /forming a thioester bond with the enzyme. / /The enzyme is a complex of three subunits (in a 6:6:6 configuration), one of them a dedicated acyl carrier protein (acp). /It is synthesized in an apo form, and is converted to its holo form by the covalent binding of the unusual /prosthetic group |FRAME: 2-5-PHOSPHORIBOSYL-3-DEPHOSPHO-COA| to the [acp] component, /resulting in |FRAME: DEACETYL-CITRATE-LYASE|. However, this holo form is still not fully active - in /order to be active, the prosthetic group needs to be acetylated, a reaction catalyzed by the /|FRAME: G6344|-encoded |FRAME: CITC-MONOMER|, which generates |FRAME: CITRATE-LYASE|. SYNONYMS - deacetyl-[citrate-oxaloacetate-lyase((pro-3S)-CH2COO-acetate)] SYNONYMS - deacetyl-(citrate-oxaloacetate-lyase) SYNONYMS - deacetyl-citrate-lyase // UNIQUE-ID - Malonate-Decarboxylases-Thiol-Form TYPES - Holo-malonate-decarboxylases COMMON-NAME - a malonate decarboxylase (thiol form) SYNONYMS - an [acyl-carrier protein] // UNIQUE-ID - Eukaryotic-Nitrate-Reductases TYPES - Nitrate-Reductases COMMON-NAME - A Eukaryotic Nitrate Reductase // UNIQUE-ID - MAR TYPES - Nitrate-Reductases COMMON-NAME - A Prokaryotic Respiratory Nitrate Reductase // UNIQUE-ID - NAP TYPES - Nitrate-Reductases COMMON-NAME - A Prokaryotic Periplasmic Nitrate Reductase // UNIQUE-ID - NAS TYPES - Nitrate-Reductases COMMON-NAME - A Prokaryotic Assimilatory Nitrate Reductase // UNIQUE-ID - Nitrogen-reductases TYPES - Nitrogenases COMMON-NAME - a dinitrogen reductase SYNONYMS - a dinitrogenase SYNONYMS - a nitrogen reductase // UNIQUE-ID - Nitrogenase-Reductases TYPES - Nitrogenases COMMON-NAME - a nitrogenase reductase // UNIQUE-ID - Phosphorylated-pyruvate-dehydrogenases TYPES - Pyruvate-dehydrogenases COMMON-NAME - a phosphorylated pyruvate dehydrogenase SYNONYMS - [pyruvate dehydrogenase (acetyl-transferring)] phosphate // UNIQUE-ID - Ribonuc-tri-P-reductases-active TYPES - Ribonucleoside-triphosphate-reductases COMMON-NAME - an active ribonucleoside triphosphate reductase // UNIQUE-ID - Ribonuc-tri-P-reductases-inactive TYPES - Ribonucleoside-triphosphate-reductases COMMON-NAME - an inactive ribonucleoside triphosphate reductase // UNIQUE-ID - MODIFIED-RUBISCO TYPES - RUBISCO COMMON-NAME - A modified Ribulose Bisphosphate Carboxylase/Oxygenase // UNIQUE-ID - B-KETOACYL-ACP TYPES - ACYL-ACP COMMON-NAME - a β-ketoacyl-[acp] SYNONYMS - 3-oxoacyl-[acyl-carrier protein] SYNONYMS - acetoacyl-ACP SYNONYMS - CH3(CH2)xCOCH2CO-S-ACP // UNIQUE-ID - CYCLOPROPYL-ACPs TYPES - ACYL-ACP COMMON-NAME - a cyclopropyl-ACP // UNIQUE-ID - Di-unsaturated-acyl-ACPs TYPES - ACYL-ACP COMMON-NAME - a di-unsaturated acyl-[acp] // UNIQUE-ID - Lipoyl-ACPs TYPES - ACYL-ACP COMMON-NAME - a lipoyl-[acp] COMMENT - Lipoate synthase catalyzes the step of lipoic acid biosynthesis at which sulfur is inserted into /|FRAME: Octanoyl-ACPs| to form the lipoate moiety |CITS: [8444795], [11106496]|. /Lipoate modification (by lipoyl-protein ligases LipB or LplA) of complex subunits is important for /function of pyruvate dehydrogenase |CITS: [814874], [6794598], [8444795]|, alpha-ketoglutarate /dehydrogenase |CITS: [814874], [6794598], [8444795]|, and the glycine cleavage system /|CITS: [1655709], [8444795]|. // UNIQUE-ID - Monounsaturated-acyl-ACPs TYPES - ACYL-ACP COMMON-NAME - a mono-unsaturated acyl-[acp] // UNIQUE-ID - Nonribosomal-Peptide-Acps TYPES - ACYL-ACP COMMON-NAME - a nonribosomal peptide-[acp] COMMENT - This class contains an acyl carrier protein holoenzyme domain of a nonribosomal peptide synthetase. This domain /is also referred to as a thiolation domain, or a peptidyl carrier protein domain |CITS: [16895337] [16195555]|. // UNIQUE-ID - OH-ACYL-ACP TYPES - ACYL-ACP COMMON-NAME - a (3R)-3-hydroxyacyl-[acp] SYNONYMS - (3R)-3-hydroxyacyl-[acyl-carrier protein] SYNONYMS - CH3(CH2)xCHOHCH2CO-S-ACP SYNONYMS - beta-OH-acyl-ACP SYNONYMS - beta-hydroxy-acyl-ACP // UNIQUE-ID - Saturated-acyl-ACPs TYPES - ACYL-ACP COMMON-NAME - a saturated acyl-[acp] // UNIQUE-ID - Tri-unsaturated-acyl-ACPs TYPES - ACYL-ACP // UNIQUE-ID - Actinorhodin-Intermediate-1 TYPES - Polyketide-ACPs COMMON-NAME - a (1'-hydroxy-3',5'-dioxo-2'-(3''-oxobutanoyl)cyclohexyl)-3,5-dioxohexanethioate-[PKS-acp] COMMENT - Dr. Martin Rejzek of the Department of Biological Chemistry at the John Innes Centre /used the ChemDraw Ultra software to determine the IUPAC name of /this compound |CITS: [McDaniel1994][10805574][15286722][2394677][Fu1994][10091691][ChemDraw06]|. SYNONYMS - intermediate1 SYNONYMS - a S-ACP 6-(1'-hydroxy-3',5'-dioxo-2'-(3''-oxobutanoyl)cyclohexyl)-3,5-dioxohexanethioate // UNIQUE-ID - Actinorhodin-Intermediate-2 TYPES - Polyketide-ACPs COMMON-NAME - a (1',5'-dihydroxy-3'-oxo-2'-(3''-oxobutanoyl)cyclohexyl)-3,5-dioxohexanethioate-[PKS-acp] COMMENT - This intermediate results from a |FRAME: SCO5086-MONOMER|-catalyzed ketoreduction of /|FRAME:Actinorhodin-Intermediate-1| at C-9. / /Dr. Martin Rejzek of the Department of Biological Chemistry at the John Innes Centre /used the ChemDraw Ultra software to determine the IUPAC name of /this compound |CITS: [2394677][Fu1994][10805574][7929165][Zhang1990][10091691][ChemDraw06] /[McDaniel1994]|. SYNONYMS - a S-ACP 6-(1',5'-dihydroxy-3'-oxo-2'-(3''-oxobutanoyl)cyclohexyl)-3,5-dioxohexanethioate SYNONYMS - intermediate 2 // UNIQUE-ID - Actinorhodin-Intermediate-3 TYPES - Polyketide-ACPs COMMON-NAME - a (3'-hydroxy-2'-(3''-oxobutanoyl)phenyl)-3,5-dioxohexanethioate-[PKS-acp] COMMENT - This intermediate results from a |FRAME: SCO5090-MONOMER|-catalyzed aromatization of /|FRAME:Actinorhodin-Intermediate-2|. / /Dr. Martin Rejzek of the Department of Biological Chemistry at the John Innes Centre /used the ChemDraw Ultra software to determine the IUPAC name of /this compound |CITS: [10091691][ChemDraw06][McDaniel1994][Fu1994][10805574][Taguchi2007] /[Keggsco01056]|. SYNONYMS - an S-ACP 6-(3'-hydroxy-2'-(3''-oxobutanoyl)phenyl)-3,5-dioxohexanethioate SYNONYMS - intermediate 3 // UNIQUE-ID - Amino-Hydroxybenzoyl-Acps TYPES - Polyketide-ACPs COMMON-NAME - a 1-(3-amino-5-hydroxyphenyl)ethan-1-one -[PKS-acp] COMMENT - This class contains an acyl carrier protein holoenzyme domain of a polyketide synthase bound to a /|FRAME: CPD-10231| starter unit. This domain is also referred to as a thiolation domain. / /This chemical structure is modified from |CITS: [15700959]|. The holo-acyl carrier protein (holo-[acp]) is represented /here as a superatom. The structure was named using the IUPAC name generator (Preferred IUPAC Name) in /MarvinSketch version 5.0 from ChemAxon. Note that this name does not take into account the thioester linkage /between the phosphopantetheinyl arm of the holo-acyl carrier protein and the polyketide chain. SYNONYMS - a 3-amino-5-hydroxybenzoyl-[acp] starter unit // UNIQUE-ID - Hepta-oxo-hexadecanoyl-ACPs TYPES - Polyketide-ACPs COMMON-NAME - a 3,5,7,9,11,13,15-hepta-oxo-hexadecanoyl-[PKS-acp] COMMENT - The octaketide is formed by the condensation of 7 malonyl groups to 1 starter acetyl group (derived from an eigth /malonyl group). The final polyketide chain is attached by a thioester bond to the 4'-phosphopantetheine arm of the /act |FRAME: SCO5089-MONOMER| |CITS: [2394677][8049233][McDaniel1994][10805574][Fu1994] /[9383392][7608065][14966533][16793516][10519556][10091691][Taguchi2007][Keggsco01056]|. SYNONYMS - octaketide // UNIQUE-ID - Rifamycin-Cyc-Pentaketide-Acps TYPES - Polyketide-ACPs COMMON-NAME - a 3-amino-8-[(2E)-2,4-dimethyl-5-oxohex-2-enoyl]-5,7-dihydroxy-6-methyl-1,4,5,6-tetrahydronaphthalene-1,4-dione -[PKS-acp] COMMENT - This class contains an acyl carrier protein holoenzyme domain of a polyketide synthase bound to the cyclized /polyketide shown here. This domain is also referred to as a thiolation domain. / /This chemical structure is modified from |CITS: [15700959]|. The holo-acyl carrier protein (holo-[acp]) is represented /here as a superatom. The structure was named using the IUPAC name generator (Preferred IUPAC Name) in /MarvinSketch version 5.0 from ChemAxon. Note that this name does not take into account the thioester linkage /between the phosphopantetheinyl arm of the holo-acyl carrier protein and the polyketide chain. SYNONYMS - a rifamycin cyclized pentaketide-[acp] intermediate // UNIQUE-ID - Rifamycin-Tetraketide-Acps TYPES - Polyketide-ACPs COMMON-NAME - a 8-(3-amino-5-hydroxyphenyl)-8-hydroxy-3,7-dimethyloctane-2,4,6-trione -[PKS-acp] COMMENT - This class contains an acyl carrier protein holoenzyme domain of a polyketide synthase bound to the polyketide /shown here. This domain is also referred to as a thiolation domain. / /This chemical structure is modified from |CITS: [15700959]|. The holo-acyl carrier protein (holo-[acp]) is represented /here as a superatom. The structure was named using the IUPAC name generator (Preferred IUPAC Name) in /MarvinSketch version 5.0 from ChemAxon. Note that this name does not take into account the thioester linkage /between the phosphopantetheinyl arm of the holo-acyl carrier protein and the polyketide chain. SYNONYMS - a rifamycin tetraketide-[acp] intermediate // UNIQUE-ID - Rifamycin-Undecaketide-Acps TYPES - Polyketide-ACPs COMMON-NAME - a 3-amino-5,7-dihydroxy-6-methyl-8-[(2E,13E,15E)-5,7,9,11-tetrahydroxy-2,4,6,8,10,12,16-heptamethyl-17-oxooctadeca-2,13,15-trienoyl]-1,4,5,6-tetrahydronaphthalene-1,4-dione-[PKS-acp] COMMENT - This class contains an acyl carrier protein holoenzyme domain of a polyketide synthase bound to the polyketide /shown here. This domain is also referred to as a thiolation domain. / /This chemical structure is modified from |CITS: [15700959]|. The holo-acyl carrier protein (holo-[acp]) is represented /here as a superatom. The structure was named using the IUPAC name generator (Preferred IUPAC Name) in /MarvinSketch version 5.0 from ChemAxon. Note that this name does not take into account the thioester linkage /between the phosphopantetheinyl arm of the holo-acyl carrier protein and the polyketide chain. SYNONYMS - a rifamycin undecaketide-[acp] intermediate // UNIQUE-ID - Chromosomes TYPES - Genetic-Elements COMMENT - The class of all chromosomes, whether eukaryotic or prokaryotic. // UNIQUE-ID - Contigs TYPES - Genetic-Elements COMMENT - The class of sequenced contigs -- assembled regions of sequenced DNA. /Use the Component-Of slot to record the genetic element of which a given /contig is a part. / // UNIQUE-ID - Organelle-Chromosomes TYPES - Genetic-Elements // UNIQUE-ID - Plasmids TYPES - Genetic-Elements COMMENT - Instances of this class describe plasmids. // UNIQUE-ID - Modified-tRNAs TYPES - All-tRNAs // UNIQUE-ID - tRNAs TYPES - All-tRNAs COMMON-NAME - an uncharged tRNA // UNIQUE-ID - G5-pppR-mRNAs TYPES - mRNAs COMMON-NAME - 5'-guanylated mRNA SYNONYMS - G(5')-ppp-R-mRNA // UNIQUE-ID - m7G5-pppR-mRNAs TYPES - mRNAs COMMON-NAME - guanine7-methylated mRNA SYNONYMS - m7G(5')pppR-mRNA // UNIQUE-ID - m7G5-pppRm-mRNAs TYPES - mRNAs COMMON-NAME - capped mRNA with cap I structure SYNONYMS - m7G(5')pppRm-mRNA // UNIQUE-ID - 16S-rRNAs TYPES - rRNAs // UNIQUE-ID - 2-o-methyladenosine-rRNAs TYPES - rRNAs COMMON-NAME - 2'-O-methyladenosine-containing rRNA // UNIQUE-ID - 23S-rRNAs TYPES - rRNAs SYNONYMS - 23S ribosomal RNA // UNIQUE-ID - 5S-rRNAs TYPES - rRNAs // UNIQUE-ID - N1-Methylguanine-containing-rRNAs TYPES - rRNAs COMMON-NAME - rRNA containing N1-methylguanine // UNIQUE-ID - N2-Methylguanine-containing-rRNAs TYPES - rRNAs COMMON-NAME - rRNA containing N2-methylguanine // UNIQUE-ID - N6-Methyladenine-containing-rRNAs TYPES - rRNAs COMMON-NAME - rRNA containing N6-methyladenine // UNIQUE-ID - Pseudouridine-containing-rRNAs TYPES - rRNAs COMMON-NAME - rRNA containing pseudouridine // UNIQUE-ID - Glycoprotein-Asn-oligosaccharides TYPES - Glycoproteins COMMON-NAME - a glycoprotein with the oligosaccharide chain attached by N-glycosyl linkage to protein L-asparagine SYNONYMS - A glycoprotein with the (glucosyl)3(mannosyl)9(N-acetylglucosaminyl)2 chain attached by glycosylamine linkage to protein-L-asparagine // UNIQUE-ID - Branched-ketoacid-E2 TYPES - Lipoyl-Protein COMMON-NAME - branched chain α-keto acid dehydrogenase lipoyl carrier // UNIQUE-ID - Dihydro-Lipoyl-Proteins TYPES - Lipoyl-Protein COMMON-NAME - protein N6-(dihydrolipoyl)lysine // UNIQUE-ID - Gcv-H TYPES - Lipoyl-Protein COMMON-NAME - glycine cleavage system lipoyl carrier // UNIQUE-ID - Oxo-glutarate-E2 TYPES - Lipoyl-Protein COMMON-NAME - oxo-glutarate dehydrogenase lipoyl carrier // UNIQUE-ID - Pyruvate-E2 TYPES - Lipoyl-Protein COMMON-NAME - pyruvate dehydrogenase lipoyl carrier // UNIQUE-ID - 2-carboxyl-cerotoyl-pks13 TYPES - Modified-pks13-Proteins COMMON-NAME - a 2-carboxyl-cerotoyl-[pks13-c-ppb] // UNIQUE-ID - 3-oxo-C78-alpha-mycolate-pks13 TYPES - Modified-pks13-Proteins COMMON-NAME - a 3-oxo-C78-α-mycolate-[pks13-c-ppb] // UNIQUE-ID - 3-oxo-C85-cis-methoxy-mycolate-pks13 TYPES - Modified-pks13-Proteins COMMON-NAME - a 3-oxo-C85-cis-methoxy-mycolate-[pks13-c-ppb] // UNIQUE-ID - 3-oxo-C86-cis-keto-mycolate-pks13 TYPES - Modified-pks13-Proteins COMMON-NAME - a 3-oxo-C86-cis-keto-mycolate-[pks13-c-ppb] // UNIQUE-ID - 3-oxo-C86-trans-methoxy-mycolate-pks13 TYPES - Modified-pks13-Proteins COMMON-NAME - a 3-oxo-C86-trans-methoxy-mycolate-[pks13-c-ppb] // UNIQUE-ID - 3-oxo-C87-trans-keto-mycolate-pks13 TYPES - Modified-pks13-Proteins COMMON-NAME - a 3-oxo-C87-trans-keto-mycolate-[pks13-c-ppb] // UNIQUE-ID - alpha-meroacyl-pks13-ks TYPES - Modified-pks13-Proteins COMMON-NAME - an α-meroacyl-[pks13-ks] // UNIQUE-ID - C78-alpha-mycolate-pks13 TYPES - Modified-pks13-Proteins COMMON-NAME - a C78-α-mycolate-[pks13-c-ppb] // UNIQUE-ID - C85-cis-methoxy-mycolate-pks13 TYPES - Modified-pks13-Proteins COMMON-NAME - a C85-cis-methoxy-mycolate-[pks13-c-ppb] // UNIQUE-ID - C86-cis-keto-mycolate-pks13 TYPES - Modified-pks13-Proteins COMMON-NAME - a C86-cis-keto-mycolate-[pks13-c-ppb] // UNIQUE-ID - C86-trans-methoxy-mycolate-pks13 TYPES - Modified-pks13-Proteins COMMON-NAME - a C86-trans-methoxy-mycolate-[pks13-c-ppb] // UNIQUE-ID - C87-trans-keto-mycolate-pks13 TYPES - Modified-pks13-Proteins COMMON-NAME - a C87-trans-keto-mycolate-[pks13-c-ppb] // UNIQUE-ID - cis-keto-meroacyl-pks13 TYPES - Modified-pks13-Proteins COMMON-NAME - a cis-keto-meroacyl-[pks13-n-ppb] // UNIQUE-ID - cis-keto-meroacyl-pks13-ks TYPES - Modified-pks13-Proteins COMMON-NAME - a cis-keto-meroacyl-[pks13-ks] // UNIQUE-ID - cis-methoxy-meroacyl-pks13 TYPES - Modified-pks13-Proteins COMMON-NAME - a cis-methoxy-meroacyl-[pks13-n-ppb] // UNIQUE-ID - cis-methoxy-meroacyl-pks13-ks TYPES - Modified-pks13-Proteins COMMON-NAME - a cis-methoxy-meroacyl-[pks13-ks] // UNIQUE-ID - trans-keto-meroacyl-pks13 TYPES - Modified-pks13-Proteins COMMON-NAME - a trans-keto-meroacyl-[pks13-n-ppb] // UNIQUE-ID - trans-keto-meroacyl-pks13-ks TYPES - Modified-pks13-Proteins COMMON-NAME - a trans-keto-meroacyl-[pks13-ks] // UNIQUE-ID - trans-methoxy-meroacyl-pks13 TYPES - Modified-pks13-Proteins COMMON-NAME - a trans-methoxy-meroacyl-[pks13-n-ppb] // UNIQUE-ID - trans-methoxy-meroacyl-pks13-ks TYPES - Modified-pks13-Proteins COMMON-NAME - a trans-methoxy-meroacyl-[pks13-ks] // UNIQUE-ID - Palmitoyl-Myelin-proteolipids TYPES - Myelin-proteolipids COMMON-NAME - O-palmitoyl-[myelin proteolipid] // UNIQUE-ID - Ox-thioredoxins-1 TYPES - Ox-Thioredoxin TYPES - Thioredoxin-A COMMON-NAME - an oxidized thioredoxin 1 // UNIQUE-ID - Ox-thioredoxins-2 TYPES - Ox-Thioredoxin TYPES - Thioredoxin-B COMMON-NAME - an oxidized thioredoxin 2 // UNIQUE-ID - Ox-thioredoxins-3 TYPES - Ox-Thioredoxin TYPES - Thioredoxin-C COMMON-NAME - an oxidized thioredoxin 3 // UNIQUE-ID - PC-3 TYPES - PC-2 COMMON-NAME - ABC Proteins // UNIQUE-ID - PC-4 TYPES - PC-2 COMMON-NAME - Membrane Proteins // UNIQUE-ID - PC-5 TYPES - PC-2 COMMON-NAME - Periplasmic Binding Proteins // UNIQUE-ID - PC-15 TYPES - PC-8 COMMON-NAME - General-Energy-Coupling-Proteins // UNIQUE-ID - 3-H-3-M-GLUTARYL-COA-REDUCTASES-P TYPES - 3-H-3-M-GLUTARYL-COA-REDUCTASES COMMON-NAME - a 3-hydroxy-3-methylglutaryl-CoA reductase-phosphate // UNIQUE-ID - Aryl-Carrier-Proteins TYPES - All-ACPs COMMON-NAME - an aryl-carrier protein // UNIQUE-ID - Fatty-Acid-Synthase-ACPs TYPES - All-ACPs COMMON-NAME - a fatty acid synthase containing an [acyl carrier protein] domain COMMENT - This class includes the universal and highly conserved carriers of acyl intermediates that are involved /in fatty acid synthesis, generally named ACP, or [acyl carrier protein]. /In yeast and mammals, ACP exists as a separate domain within a large multifunctional fatty acid /synthase polyprotein (type I FAS), whereas in bacteria and plastids it is a small monomeric protein /(type II FAS). Bacterial ACPs can also serve as acyl donors for synthesis of a variety of products, /including endotoxin and acylated homoserine lactones involved in quorum sensing. / /ACP proteins are synthesized in their "apo" inactive form, and are activated by attachment of a /|FRAME: PANTETHEINE-P| moiety, removed from |FRAME: CO-A|, to a serine residue, in a reaction /catalyzed by 4'-phosphopantetheinyl transferase |CITS: [18059524]|. The activation converts /|FRAME: apo-ACP| to |FRAME: ACP|. // UNIQUE-ID - Peptidyl-Carrier-Proteins TYPES - All-ACPs COMMON-NAME - a peptidyl-carrier protein // UNIQUE-ID - Polyketide-ACP-Proteins TYPES - All-ACPs COMMON-NAME - a polyketide synthase containing an [acp] domain COMMENT - Polyketide synthases (PKSs) are found in soil and marine filamentous bacteria, as well as in fungi and /higher plants, and are responsible for producing such therapeutically important natural products as /erythromycin and lovastatin. /Analogous to the fatty acid synthases, PKSs can be divided to two types: multifunctional polyproteins /(type I) and discrete protein (type II). / /Type I PKSs are organized into modular complexes, each catalyzing individual chain elongation steps /using an associated carrier protein. The minimal type I PKS module consists of 3 domains: a /ketosynthase, a acyltransferase, and an ACP. The acyltransferase domain catalyzes the priming of the /flanking ACP domain with the appropriate substrate. / /Type II PKS ACPs, on the other hand, possess catalytic self-acylation activity |CITS: [18059524]|. // UNIQUE-ID - Detyrosinated-alpha--tubulins TYPES - Alpha-tubulins COMMON-NAME - detyrosinated α-tubulin // UNIQUE-ID - Angiotensins-I TYPES - Angiotensins COMMON-NAME - an angiotensin I // UNIQUE-ID - Propionyl-CoA-CO2-ligases TYPES - Apo-Propionyl-CoA-CO2-ligases COMMON-NAME - [propionyl-CoA:carbon-dioxide ligase (ADP-forming)] // UNIQUE-ID - Carboxybiotin-BCCP TYPES - BCCP-monomers COMMON-NAME - a carboxylated-biotinylated-BCCP // UNIQUE-ID - Beta-adrenergic-receptors-P TYPES - Beta-adrenergic-receptors COMMON-NAME - a phosphorylated β-adrenergic receptor SYNONYMS - phospho-[?-adrenergic receptor] // UNIQUE-ID - C2a-Proteins TYPES - C2-Proteins COMMON-NAME - complement component protein C2a // UNIQUE-ID - C2b-Proteins TYPES - C2-Proteins COMMON-NAME - complement component protein C2b // UNIQUE-ID - C4a-Proteins TYPES - C4-Proteins COMMON-NAME - complement component protein C4a // UNIQUE-ID - C4b-Proteins TYPES - C4-Proteins COMMON-NAME - complement component protein C4b // UNIQUE-ID - Cytochromes-B TYPES - Cytochromes COMMON-NAME - a cytochrome b COMMENT - This compound class stands for generic and unspecified Cytochrome B proteins. In this class, the Cytochromes B are in their standard, non-reduced form. SYNONYMS - cytb proteins // UNIQUE-ID - Cytochromes-c TYPES - Cytochromes COMMON-NAME - a cytochrome c // UNIQUE-ID - Cytochromes-D TYPES - Cytochromes COMMON-NAME - a cytochrome d COMMENT - This compound class stands for generic and unspecified Cytochrome D proteins. In this class, the Cytochromes D are in their standard, non-reduced form. SYNONYMS - a Cytochrome D protein SYNONYMS - Cytochrome D protein SYNONYMS - cytd proteins // UNIQUE-ID - Cytochromes-d1 TYPES - Cytochromes COMMON-NAME - a cytochrome d1 // UNIQUE-ID - Cytochromes-o TYPES - Cytochromes COMMON-NAME - a cytochrome o // UNIQUE-ID - Oxidized-cytochromes TYPES - Cytochromes COMMON-NAME - an oxidized cytochrome SYNONYMS - a ferricytochrome // UNIQUE-ID - Reduced-cytochromes TYPES - Cytochromes COMMON-NAME - a reduced cytochrome SYNONYMS - a ferrocytochrome // UNIQUE-ID - Elongation-factor-2-P TYPES - Elongation-factor-2 COMMON-NAME - phosphorylated elongation-factor 2 SYNONYMS - elongation-factor 2 phosphate // UNIQUE-ID - Fas-activated-ser-thre-protein-P TYPES - Fas-activated-ser-thre-protein COMMON-NAME - Fas-activated serine/threonine phosphoprotein // UNIQUE-ID - Oxidized-ferredoxins TYPES - Ferredoxins COMMON-NAME - an oxidized ferredoxin COMMENT - Ferredoxins are present in all organisms, from bacteria and archaea to higher eukaryotes. /They are small and acidic proteins with prosthetic groups composed of iron and sulfur atoms, which are referred to /as |FRAME: FeS-Centers|. The ferredoxins function as intracellular electron carriers with a low reduction potential. / /Ferredoxins are classified into three groups according to the types and numbers of their Fe-S clusters. /The first group consists of monomeric proteins containing one [2Fe-2S] cluster, which includes ferredoxins /that transfer electrons in redox chains linked to hydroxylases and oxygenases in a wide range of organisms /(from bacteria to mammals), and which includes plant and algal ferredoxins that function as electron carriers /in photosynthesis. / /The other two groups consist of ubiquitous proteins containing [3Fe-4S]/ [4Fe-4S] and are typically found in bacteria. /They may differ in cluster type (3Fe or 4Fe), number (one or two), and length of polypeptide chain /(up to over 100 residues), and include the relatively small 2[4Fe-4S] ferredoxins that were first isolated from /anaerobic bacteria |CITS: [16466637]|. SYNONYMS - oxidized ferredoxin // UNIQUE-ID - Oxidized-ferrodoxins TYPES - Ferredoxins COMMON-NAME - an oxidized ferredoxin // UNIQUE-ID - Reduced-ferredoxins TYPES - Ferredoxins COMMON-NAME - a reduced ferredoxin COMMENT - Ferredoxins are present in all organisms, from bacteria and archaea to higher eukaryotes. /They are small and acidic proteins with prosthetic groups composed of iron and sulfur atoms, which are referred to /as |FRAME: FeS-Centers|. The ferredoxins function as intracellular electron carriers with a low reduction potential. / /Ferredoxins are classified into three groups according to the types and numbers of their Fe-S clusters. /The first group consists of monomeric proteins containing one [2Fe-2S] cluster, which includes ferredoxins /that transfer electrons in redox chains linked to hydroxylases and oxygenases in a wide range of organisms /(from bacteria to mammals), and which includes plant and algal ferredoxins that function as electron carriers /in photosynthesis. / /The other two groups consist of ubiquitous proteins containing [3Fe-4S]/ [4Fe-4S] and are typically found in bacteria. /They may differ in cluster type (3Fe or 4Fe), number (one or two), and length of polypeptide chain /(up to over 100 residues), and include the relatively small 2[4Fe-4S] ferredoxins that were first isolated from /anaerobic bacteria |CITS: [16466637]|. SYNONYMS - reduced ferredoxin // UNIQUE-ID - Reduced-ferrodoxins TYPES - Ferredoxins COMMON-NAME - a reduced ferredoxin // UNIQUE-ID - Oxidized-Ferroproteins TYPES - Ferroproteins COMMON-NAME - an oxidized ferroprotein (Fe III) // UNIQUE-ID - Reduced-Ferroproteins TYPES - Ferroproteins COMMON-NAME - a reduced ferroprotein (Fe II) // UNIQUE-ID - Flavodoxin TYPES - Flavoproteins COMMON-NAME - a flavodoxin COMMENT - Flavodoxin (Fld) is a soluble electron shuttle flavoprotein (it binds a flavin mononucleotide) that is /isofunctional with ferredoxin (Fd). In photosynthetic organisms flavodoxin is reduced by the terminal /electron acceptors of |FRAME: CPLX490-3509|. / /Fd and Fld are involved in multiple redox reactions. They can both sustain cyclic as well as linear electron /flow. The cyclic electron flow creates a proton gradient across the photosynthetic membrane and allows /ATP synthesis independent of photosystem II activity. /Linear electron flow, on the other hand, utilizes electrons from the reduced Fd and Fld for NADP+ /reduction in a reaction catalyzed by |FRAME: SYNPCC7942_0978-MONOMER| (FNR). /The source of electrons during linear electron flow is the dissociation of water by /|FRAME: CPLX490-3506|. / /Fd serves also as an electron donor to a number of soluble enzymes involved in nitrogen metabolism, /sulfur metabolism and the regulation of carbon metabolism. Fld can substitute Fd under conditions of /iron deprivation in most cyanobacteria and some algae and may be efficient in reducing most or all of /these soluble enzymes |CITS: [11687213]|. // UNIQUE-ID - Oxidized-Flavoproteins TYPES - Flavoproteins COMMON-NAME - an oxidized flavoprotein // UNIQUE-ID - Reduced-Flavoproteins TYPES - Flavoproteins COMMON-NAME - a reduced flavoprotein // UNIQUE-ID - Phos-G-protein-coupled-receptors TYPES - G-protein-coupled-receptors COMMON-NAME - a phosphorylated G-protein-coupled-receptor SYNONYMS - [G-protein-coupled receptor] phosphate // UNIQUE-ID - Azurins TYPES - Glutaredoxins COMMON-NAME - an azurin // UNIQUE-ID - NrdH-Glutaredoxin-like-Proteins TYPES - Glutaredoxins COMMON-NAME - an NrdH glutaredoxin-like protein COMMENT - NrdH proteins behave functionally like a classical thioredoxin, but have sequence similarity to /glutaredoxins |CITS: [9218434]|. // UNIQUE-ID - Red-Glutaredoxins TYPES - Glutaredoxins COMMON-NAME - a reduced glutaredoxin // UNIQUE-ID - Goodpasture-antigen-binding-protein-P TYPES - Goodpasture-antigen-binding-protein COMMON-NAME - Goodpasture antigen-binding phosphoprotein // UNIQUE-ID - Acetylated-histones TYPES - Histones COMMON-NAME - an acetylated histone // UNIQUE-ID - Deacetylated-histones TYPES - Histones COMMON-NAME - a deacetylated histone // UNIQUE-ID - Dep-HMG-CoA-reductase-NADPH-kinases TYPES - HMG-CoA-reductase-NADPH-kinases COMMON-NAME - dephospho-[hydroxymethylglutaryl-CoA reductase (NADPH)] kinase // UNIQUE-ID - Ox-Hybrid-Cluster-Proteins TYPES - Hybrid-Cluster-Proteins COMMENT - This compound class stands for generic and unspecified oxidized hybrid-cluster proteins. Its physiological role is not known as of June 2003. SYNONYMS - an oxidized hybrid-cluster protein SYNONYMS - oxidized hybrid-cluster protein SYNONYMS - hybrid-cluster proteinox // UNIQUE-ID - Red-Hybrid-Cluster-Proteins TYPES - Hybrid-Cluster-Proteins COMMENT - This compound class stands for generic and unspecified reduced hybrid-cluster proteins. Its physiological role is not known as of June 2003. SYNONYMS - a reduced hybrid-cluster protein SYNONYMS - reduced hybrid-cluster protein SYNONYMS - hybrid-cluster proteinred // UNIQUE-ID - Phosphorylated-IkB-proteins TYPES - IkB-proteins COMMON-NAME - a phosphorylated IκB protein SYNONYMS - an IκB phosphoprotein // UNIQUE-ID - mitogen-act-protein-kinase-kinase-P TYPES - mitogen-activated-protein-kinase-kinase COMMON-NAME - phosphorylated mitogen-activated protein kinase kinase // UNIQUE-ID - METHYL-MTAC TYPES - MTAC COMMON-NAME - methylated MtaC protein // UNIQUE-ID - Methylated-MtbC-Proteins TYPES - MtbC-Proteins COMMON-NAME - a methylated MtbC protein // UNIQUE-ID - Methylated-MtmC-Proteins TYPES - MtmC-Proteins COMMON-NAME - a methylated MtmC protein // UNIQUE-ID - Methylated-MtqC-Proteins TYPES - MtqC-Proteins COMMON-NAME - a methylated MtqC protein // UNIQUE-ID - Methylated-MtsB-Proteins TYPES - MtsB-Proteins COMMON-NAME - a methylated MtsB protein // UNIQUE-ID - Methylated-MttC-Proteins TYPES - MttC-Proteins COMMON-NAME - a methylated MttC protein // UNIQUE-ID - Peptide-containing-Lysine-or-Arginines TYPES - Peptides COMMON-NAME - a peptide containing lysine or arginine // UNIQUE-ID - Prolyltripeptides TYPES - Peptides-with-pro-in-3rd-position COMMON-NAME - a tripeptide with proline at the third position SYNONYMS - Xaa-Xaa-Pro // UNIQUE-ID - Phosphorylases-a TYPES - Phosphorylases COMMON-NAME - phosphoylase a // UNIQUE-ID - Phosphorylases-b TYPES - Phosphorylases COMMON-NAME - phosphoylase b // UNIQUE-ID - Thrombins TYPES - Prothrombins COMMON-NAME - a thrombin COMMENT - Thrombin is a coagulation protein in the blood stream that has many effects in the coagulation cascade. It is a serine protease (|FRAME: 3.4.21.5-RXN "EC 3.4.21.5"|) that converts soluble fibrinogen into insoluble strands of fibrin, as well as catalyzing many other coagulation-related reactions. SYNONYMS - activated factor II SYNONYMS - factor IIa // UNIQUE-ID - Ox-Demethylmenaquinone-Oxidoreductases TYPES - Quino-Proteins COMMENT - This compound class stands for generic and unspecified oxidized menaquinone oxidoreductases with demethylmenaquinone. SYNONYMS - a menaquinone oxidoreductase (demethylmenaquinone) SYNONYMS - menaquinone oxidoreductase (demethylmenaquinone) // UNIQUE-ID - Ox-Menaquinone-8-Oxidoreductases TYPES - Quino-Proteins COMMENT - This compound class stands for generic and unspecified oxidized menaquinone oxidoreductases with menaquinone-8. SYNONYMS - a menaquinone oxidoreductase (menaquinone-8) SYNONYMS - menaquinone oxidoreductase (menaquinone-8) // UNIQUE-ID - Ox-Ubiquinone-8-Oxidoreductases TYPES - Quino-Proteins COMMENT - This compound class stands for generic and unspecified oxidized oxidoreductases with ubiquinone-8. SYNONYMS - a ubiquinone-8 oxidoreductase SYNONYMS - ubiquinone-8 oxidoreductase // UNIQUE-ID - Red-Demethylmenaquinol-Oxidoreductases TYPES - Quino-Proteins COMMENT - This compound class stands for generic and unspecified reduced menaquinone oxidoreductases with demethylmenaquinol. SYNONYMS - a menaquinone oxidoreductase (demethylmenaquinol) SYNONYMS - menaquinone oxidoreductase (demethylmenaquinol) // UNIQUE-ID - Red-Menaquinol-8-Oxidoreductases TYPES - Quino-Proteins COMMENT - This compound class stands for generic and unspecified reduced menaquinone oxidoreductases with menaquinol-8. SYNONYMS - a menaquinone oxidoreductase (menaquinol-8) SYNONYMS - menaquinone oxidoreductase (menaquinol-8) // UNIQUE-ID - Red-Ubiquinol-8-Oxidoreductases TYPES - Quino-Proteins COMMENT - This compound class stands for generic and unspecified reduced oxidoreductases with ubiquinol-8. SYNONYMS - a ubiquinol-8 oxidoreductase SYNONYMS - ubiquinol-8 oxidoreductase // UNIQUE-ID - Nonmethylated-Ribosomal-Protein-L11s TYPES - Ribosomal-Protein-L11s COMMON-NAME - a non-methylated ribosomal protein L11 // UNIQUE-ID - Oxidized-Rubredoxins TYPES - Rubredoxins COMMON-NAME - an oxidized rubredoxin // UNIQUE-ID - Reduced-Rubredoxins TYPES - Rubredoxins COMMON-NAME - a reduced rubredoxin // UNIQUE-ID - Red-Thioredoxin TYPES - Thioredoxin COMMON-NAME - a reduced thioredoxin SYNONYMS - thioredoxin disulfide // UNIQUE-ID - Thioredoxin-A TYPES - Thioredoxin COMMON-NAME - a thioredoxin 1 // UNIQUE-ID - Thioredoxin-B TYPES - Thioredoxin COMMON-NAME - a thioredoxin 2 // UNIQUE-ID - Thioredoxin-C TYPES - Thioredoxin COMMON-NAME - a thioredoxin 3 // UNIQUE-ID - Cleaved-TNF-alpha TYPES - TNF-alpha COMMON-NAME - cleaved TNF-α SYNONYMS - cleaved tumor necrosis factor α // UNIQUE-ID - Cleaved-type-1-transmembrane-domains TYPES - Type-1-transmemberane-domains COMMON-NAME - cleaved type-1 transmemberane domains // UNIQUE-ID - Phosphorylated-tyrosine-3-monooxygenases TYPES - Tyrosine-3-monooxygenases COMMON-NAME - phosphorylated [tyrosine-3-monooxygenase] SYNONYMS - phospho- [tyrosine-3-monooxygenase] // UNIQUE-ID - Ubiquitin-C-terminal-thioesters TYPES - Ubiquitins COMMON-NAME - a ubiquitin C-terminal thioester // UNIQUE-ID - Degraded-Von-Willebrand-Factor TYPES - Von-Willebrand-Factor COMMON-NAME - a degraded product of von willebrand factor // UNIQUE-ID - GO:0001610 TYPES - GO:0001609 COMMON-NAME - A1 adenosine receptor activity, G-protein coupled SYNONYMS - A1 adenosine receptor activity, G protein coupled SYNONYMS - G protein coupled A1 adenosine receptor activity SYNONYMS - G-protein-coupled A1 adenosine receptor activity // UNIQUE-ID - GO:0001611 TYPES - GO:0001609 COMMON-NAME - A2A adenosine receptor activity, G-protein coupled SYNONYMS - A2A adenosine receptor activity, G protein coupled SYNONYMS - G protein coupled A2A adenosine receptor activity SYNONYMS - G-protein-coupled A2A adenosine receptor activity // UNIQUE-ID - GO:0001612 TYPES - GO:0001609 COMMON-NAME - A2B adenosine receptor activity, G-protein coupled SYNONYMS - A2B adenosine receptor activity, G protein coupled SYNONYMS - G protein coupled A2B adenosine receptor activity SYNONYMS - G-protein-coupled A2B adenosine receptor activity // UNIQUE-ID - GO:0001613 TYPES - GO:0001609 COMMON-NAME - A3 adenosine receptor activity, G-protein coupled SYNONYMS - A3 adenosine receptor activity, G protein coupled SYNONYMS - G protein coupled A3 adenosine receptor activity SYNONYMS - G-protein-coupled A3 adenosine receptor activity // UNIQUE-ID - GO:0045029 TYPES - GO:0015065 COMMON-NAME - UDP-activated nucleotide receptor activity // UNIQUE-ID - GO:0045030 TYPES - GO:0015065 COMMON-NAME - UTP-activated nucleotide receptor activity // UNIQUE-ID - GO:0001785 TYPES - GO:0004955 COMMON-NAME - prostaglandin J receptor activity SYNONYMS - PGJ receptor activity SYNONYMS - PGJ(2) receptor activity // UNIQUE-ID - GO:0004956 TYPES - GO:0004955 COMMON-NAME - prostaglandin D receptor activity SYNONYMS - PGD receptor activity SYNONYMS - PGD(2) receptor activity // UNIQUE-ID - GO:0004957 TYPES - GO:0004955 COMMON-NAME - prostaglandin E receptor activity SYNONYMS - PGE receptor activity SYNONYMS - PGE(2) receptor activity // UNIQUE-ID - GO:0004958 TYPES - GO:0004955 COMMON-NAME - prostaglandin F receptor activity SYNONYMS - PGF receptor activity SYNONYMS - PGF(2-alpha) receptor activity // UNIQUE-ID - GO:0016501 TYPES - GO:0004955 COMMON-NAME - prostacyclin receptor activity SYNONYMS - PGI receptor activity SYNONYMS - PGI(2) receptor activity SYNONYMS - prostaglandin I receptor activity // UNIQUE-ID - GO:0004937 TYPES - GO:0004936 COMMON-NAME - alpha1-adrenergic receptor activity SYNONYMS - alpha1 adrenoceptor // UNIQUE-ID - GO:0004938 TYPES - GO:0004936 COMMON-NAME - alpha2-adrenergic receptor activity SYNONYMS - alpha2 adrenoceptor // UNIQUE-ID - GO:0004940 TYPES - GO:0004939 COMMON-NAME - beta1-adrenergic receptor activity SYNONYMS - beta1 adrenoceptor // UNIQUE-ID - GO:0004941 TYPES - GO:0004939 COMMON-NAME - beta2-adrenergic receptor activity SYNONYMS - beta2 adrenoceptor // UNIQUE-ID - GO:0001590 TYPES - GO:0001588 COMMON-NAME - dopamine D1 receptor activity // UNIQUE-ID - GO:0016493 TYPES - GO:0004950 TYPES - GO:0019957 COMMON-NAME - C-C chemokine receptor activity // UNIQUE-ID - GO:0016494 TYPES - GO:0004950 TYPES - GO:0019958 COMMON-NAME - C-X-C chemokine receptor activity // UNIQUE-ID - GO:0015054 TYPES - GO:0004951 COMMON-NAME - gastrin receptor activity SYNONYMS - cholecystokinin-B receptor activity // UNIQUE-ID - GO:0001601 TYPES - GO:0004983 COMMON-NAME - peptide YY receptor activity // UNIQUE-ID - GO:0001602 TYPES - GO:0004983 COMMON-NAME - pancreatic polypeptide receptor activity // UNIQUE-ID - GO:0008294 TYPES - GO:0004016 COMMON-NAME - calcium- and calmodulin-responsive adenylate cyclase activity SYNONYMS - calcium- and calmodulin-responsive adenylyl cyclase activity SYNONYMS - calcium/calmodulin-responsive adenylate cyclase activity // UNIQUE-ID - GO:0004506 TYPES - GO:0016705 TYPES - GO:0004497 COMMON-NAME - squalene monooxygenase activity SYNONYMS - squalene hydroxylase activity // UNIQUE-ID - GO:0008389 TYPES - GO:0016705 TYPES - GO:0004497 COMMON-NAME - coumarin 7-hydroxylase activity SYNONYMS - cytochrome P450 CYP2A5 // UNIQUE-ID - GO:0008395 TYPES - GO:0004497 COMMON-NAME - steroid hydroxylase activity // UNIQUE-ID - GO:0008403 TYPES - GO:0004497 TYPES - GO:0016705 COMMON-NAME - 25-hydroxycholecalciferol-24-hydroxylase activity SYNONYMS - 25-hydroxyvitamin D3 24-hydroxylase activity SYNONYMS - cytochrome P450 CYP24 // UNIQUE-ID - GO:0016709 TYPES - GO:0016705 TYPES - GO:0004497 COMMON-NAME - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen // UNIQUE-ID - GO:0016712 TYPES - GO:0004497 TYPES - GO:0016705 COMMON-NAME - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen // UNIQUE-ID - GO:0016713 TYPES - GO:0004497 TYPES - GO:0016705 COMMON-NAME - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen SYNONYMS - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulphur protein as one donor, and incorporation of one atom of oxygen // UNIQUE-ID - GO:0016714 TYPES - GO:0016705 TYPES - GO:0004497 COMMON-NAME - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced pteridine as one donor, and incorporation of one atom of oxygen // UNIQUE-ID - GO:0016715 TYPES - GO:0004497 TYPES - GO:0016705 COMMON-NAME - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced ascorbate as one donor, and incorporation of one atom of oxygen // UNIQUE-ID - GO:0016716 TYPES - GO:0004497 TYPES - GO:0016705 COMMON-NAME - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, another compound as one donor, and incorporation of one atom of oxygen // UNIQUE-ID - GO:0019135 TYPES - GO:0004497 TYPES - GO:0016705 COMMON-NAME - deoxyhypusine monooxygenase activity SYNONYMS - deoxyhypusine dioxygenase activity SYNONYMS - deoxyhypusine hydroxylase activity SYNONYMS - deoxyhypusine,hydrogen-donor:oxygen oxidoreductase (2-hydroxylating) SYNONYMS - DOHH activity // UNIQUE-ID - GO:0004508 TYPES - GO:0008395 TYPES - GO:0016705 COMMON-NAME - steroid 17-alpha-monooxygenase activity SYNONYMS - 17alpha-hydroxylase-C17,20 lyase activity SYNONYMS - cytochrome P-450 (P-45017alpha,lyase) SYNONYMS - cytochrome P450 CYP17 SYNONYMS - cytochrome p450 XVIIA1 activity SYNONYMS - cytochrome P45017alpha SYNONYMS - steroid 17-alpha-hydroxylase activity SYNONYMS - steroid 17-alpha-hydroxylase-C17-20 lyase activity SYNONYMS - steroid 17-alpha-hydroxylase/17,20 lyase activity SYNONYMS - steroid 17alpha-hydroxylase activity SYNONYMS - steroid 17alpha-monooxygenase activity SYNONYMS - steroid 17alphahydroxylase/17,20 lyase activity SYNONYMS - steroid,hydrogen-donor:oxygen oxidoreductase (17alpha-hydroxylating) // UNIQUE-ID - GO:0004509 TYPES - GO:0008395 TYPES - GO:0016705 COMMON-NAME - steroid 21-monooxygenase activity SYNONYMS - 21-hydroxylase activity SYNONYMS - cytochrome P450 CYP21A1 SYNONYMS - cytochrome p450 XXIA1 activity SYNONYMS - steroid 21-hydroxylase activity SYNONYMS - steroid,hydrogen-donor:oxygen oxidoreductase (21-hydroxylating) // UNIQUE-ID - GO:0008387 TYPES - GO:0008395 TYPES - GO:0016705 COMMON-NAME - steroid 7-alpha-hydroxylase activity SYNONYMS - cytochrome P450 CYP2A12 // UNIQUE-ID - GO:0004129 TYPES - GO:0015002 TYPES - GO:0015078 TYPES - GO:0016676 COMMON-NAME - cytochrome-c oxidase activity SYNONYMS - aa3-type cytochrome c oxidase SYNONYMS - ba3-type cytochrome c oxidase SYNONYMS - caa3-type cytochrome c oxidase SYNONYMS - cbb3-type cytochrome c oxidase SYNONYMS - complex IV (mitochondrial electron transport) activity SYNONYMS - cytochrome a3 activity SYNONYMS - cytochrome aa3 activity SYNONYMS - cytochrome oxidase activity SYNONYMS - ferrocytochrome c oxidase SYNONYMS - ferrocytochrome-c:oxygen oxidoreductase SYNONYMS - indophenol oxidase SYNONYMS - indophenolase SYNONYMS - NADH cytochrome c oxidase SYNONYMS - warburg's respiratory enzyme activity // UNIQUE-ID - GO:0003854 TYPES - GO:0033764 TYPES - GO:0016229 COMMON-NAME - 3-beta-hydroxy-delta5-steroid dehydrogenase activity SYNONYMS - 3-beta-hydroxy-D5-steroid dehydrogenase activity // UNIQUE-ID - GO:0004303 TYPES - GO:0033764 TYPES - GO:0016229 COMMON-NAME - estradiol 17-beta-dehydrogenase activity SYNONYMS - 17-beta-hydroxysteroid dehydrogenase // UNIQUE-ID - GO:0033764 TYPES - GO:0016229 TYPES - GO:0016616 COMMON-NAME - steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor // UNIQUE-ID - GO:0033765 TYPES - GO:0016229 TYPES - GO:0016627 COMMON-NAME - steroid dehydrogenase activity, acting on the CH-CH group of donors // UNIQUE-ID - GO:0008812 TYPES - GO:0016614 COMMON-NAME - choline dehydrogenase activity SYNONYMS - choline oxidase activity SYNONYMS - choline-cytochrome c reductase activity SYNONYMS - choline:(acceptor) 1-oxidoreductase activity SYNONYMS - choline:(acceptor) oxidoreductase activity SYNONYMS - choline:acceptor 1-oxidoreductase activity // UNIQUE-ID - GO:0016615 TYPES - GO:0016614 COMMON-NAME - malate dehydrogenase activity // UNIQUE-ID - GO:0016616 TYPES - GO:0016614 COMMON-NAME - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor // UNIQUE-ID - GO:0016899 TYPES - GO:0016614 COMMON-NAME - oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor // UNIQUE-ID - GO:0016900 TYPES - GO:0016614 COMMON-NAME - oxidoreductase activity, acting on the CH-OH group of donors, disulfide as acceptor SYNONYMS - oxidoreductase activity, acting on the CH-OH group of donors, disulphide as acceptor // UNIQUE-ID - GO:0047545 TYPES - GO:0016614 COMMON-NAME - 2-hydroxyglutarate dehydrogenase activity SYNONYMS - (S)-2-hydroxyglutarate:(acceptor) 2-oxidoreductase SYNONYMS - (S)-2-hydroxyglutarate:acceptor 2-oxidoreductase SYNONYMS - alpha-hydroxyglutarate dehydrogenase (NAD+ specific) SYNONYMS - alpha-hydroxyglutarate dehydrogenase activity SYNONYMS - alpha-hydroxyglutarate oxidoreductase activity SYNONYMS - alpha-ketoglutarate reductase activity SYNONYMS - hydroxyglutaric dehydrogenase activity SYNONYMS - L-alpha-hydroxyglutarate dehydrogenase activity SYNONYMS - L-alpha-hydroxyglutarate:NAD+ 2-oxidoreductase // UNIQUE-ID - GO:0000104 TYPES - GO:0016627 COMMON-NAME - succinate dehydrogenase activity SYNONYMS - fumarate reductase // UNIQUE-ID - GO:0000248 TYPES - GO:0016717 TYPES - GO:0016627 COMMON-NAME - C-5 sterol desaturase activity SYNONYMS - sterol-C5-desaturase // UNIQUE-ID - GO:0003995 TYPES - GO:0016627 COMMON-NAME - acyl-CoA dehydrogenase activity SYNONYMS - acyl CoA dehydrogenase activity SYNONYMS - acyl coenzyme A dehydrogenase activity SYNONYMS - acyl dehydrogenase activity SYNONYMS - acyl-CoA:(acceptor) 2,3-oxidoreductase activity SYNONYMS - acyl-CoA:acceptor 2,3-oxidoreductase activity SYNONYMS - fatty acyl coenzyme A dehydrogenase activity SYNONYMS - fatty-acyl-CoA dehydrogenase activity SYNONYMS - general acyl CoA dehydrogenase activity SYNONYMS - long-chain acyl coenzyme A dehydrogenase activity SYNONYMS - long-chain acyl-CoA dehydrogenase activity SYNONYMS - medium-chain acyl-CoA dehydrogenase activity SYNONYMS - medium-chain acyl-coenzyme A dehydrogenase activity // UNIQUE-ID - GO:0004152 TYPES - GO:0016627 COMMON-NAME - dihydroorotate dehydrogenase activity SYNONYMS - (S)-dihydroorotate:(acceptor) oxidoreductase activity SYNONYMS - (S)-dihydroorotate:acceptor oxidoreductase activity SYNONYMS - dihydroorotate:ubiquinone oxidoreductase activity // UNIQUE-ID - GO:0016628 TYPES - GO:0016627 COMMON-NAME - oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor // UNIQUE-ID - GO:0016634 TYPES - GO:0016627 COMMON-NAME - oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor // UNIQUE-ID - GO:0016635 TYPES - GO:0016627 COMMON-NAME - oxidoreductase activity, acting on the CH-CH group of donors, quinone or related compound as acceptor // UNIQUE-ID - GO:0051786 TYPES - GO:0016627 COMMON-NAME - all-trans-retinol 13,14-reductase activity SYNONYMS - (13,14)-all-trans-retinol saturase activity SYNONYMS - all-trans-13,14-dihydroretinol:acceptor 13,14-oxidoreductase activity SYNONYMS - all-trans-retinol:all-trans-13,14-dihydroretinol saturase activity SYNONYMS - retinol saturase activity SYNONYMS - RetSat activity // UNIQUE-ID - GO:0016639 TYPES - GO:0016638 COMMON-NAME - oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor // UNIQUE-ID - GO:0016641 TYPES - GO:0016638 COMMON-NAME - oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor // UNIQUE-ID - GO:0008480 TYPES - GO:0016645 COMMON-NAME - sarcosine dehydrogenase activity SYNONYMS - monomethylglycine dehydrogenase activity SYNONYMS - sarcosine N-demethylase activity SYNONYMS - sarcosine:(acceptor) oxidoreductase (demethylating) SYNONYMS - sarcosine:acceptor oxidoreductase (demethylating) // UNIQUE-ID - GO:0016646 TYPES - GO:0016645 COMMON-NAME - oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor // UNIQUE-ID - GO:0016647 TYPES - GO:0016645 COMMON-NAME - oxidoreductase activity, acting on the CH-NH group of donors, oxygen as acceptor // UNIQUE-ID - GO:0047865 TYPES - GO:0016645 COMMON-NAME - dimethylglycine dehydrogenase activity SYNONYMS - N,N-dimethylglycine oxidase activity SYNONYMS - N,N-dimethylglycine:(acceptor) oxidoreductase (demethylating) SYNONYMS - N,N-dimethylglycine:acceptor oxidoreductase (demethylating) // UNIQUE-ID - GO:0003954 TYPES - GO:0016651 COMMON-NAME - NADH dehydrogenase activity SYNONYMS - beta-NADH dehydrogenase dinucleotide activity SYNONYMS - cytochrome c reductase activity SYNONYMS - diaphorase activity SYNONYMS - dihydrocodehydrogenase I dehydrogenase activity SYNONYMS - dihydronicotinamide adenine dinucleotide dehydrogenase activity SYNONYMS - diphosphopyridine diaphorase activity SYNONYMS - diphosphopyrinase activity SYNONYMS - DPNH diaphorase activity SYNONYMS - NADH diaphorase activity SYNONYMS - NADH hydrogenase activity SYNONYMS - NADH oxidoreductase activity SYNONYMS - NADH-menadione oxidoreductase activity SYNONYMS - NADH2 dehydrogenase activity SYNONYMS - NADH:(acceptor) oxidoreductase activity SYNONYMS - NADH:acceptor oxidoreductase activity SYNONYMS - NADH:cytochrome c oxidoreductase activity SYNONYMS - reduced diphosphopyridine nucleotide diaphorase activity SYNONYMS - type 1 dehydrogenase activity SYNONYMS - type I dehydrogenase activity // UNIQUE-ID - GO:0016652 TYPES - GO:0016651 COMMON-NAME - oxidoreductase activity, acting on NADH or NADPH, NAD or NADP as acceptor // UNIQUE-ID - GO:0016654 TYPES - GO:0016651 COMMON-NAME - oxidoreductase activity, acting on NADH or NADPH, disulfide as acceptor SYNONYMS - oxidoreductase activity, acting on NADH or NADPH, disulphide as acceptor // UNIQUE-ID - GO:0016655 TYPES - GO:0016651 COMMON-NAME - oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor // UNIQUE-ID - GO:0016657 TYPES - GO:0016651 COMMON-NAME - oxidoreductase activity, acting on NADH or NADPH, nitrogenous group as acceptor // UNIQUE-ID - GO:0050664 TYPES - GO:0016651 COMMON-NAME - oxidoreductase activity, acting on NADH or NADPH, with oxygen as acceptor // UNIQUE-ID - GO:0015036 TYPES - GO:0016667 COMMON-NAME - disulfide oxidoreductase activity SYNONYMS - disulphide oxidoreductase activity // UNIQUE-ID - GO:0016670 TYPES - GO:0016667 COMMON-NAME - oxidoreductase activity, acting on sulfur group of donors, oxygen as acceptor SYNONYMS - oxidoreductase activity, acting on sulphur group of donors, oxygen as acceptor // UNIQUE-ID - GO:0016671 TYPES - GO:0016667 COMMON-NAME - oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor SYNONYMS - oxidoreductase activity, acting on sulphur group of donors, disulphide as acceptor // UNIQUE-ID - GO:0016676 TYPES - GO:0016675 COMMON-NAME - oxidoreductase activity, acting on heme group of donors, oxygen as acceptor SYNONYMS - oxidoreductase activity, acting on haem group of donors, oxygen as acceptor // UNIQUE-ID - GO:0016681 TYPES - GO:0016679 COMMON-NAME - oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor // UNIQUE-ID - GO:0008379 TYPES - GO:0051920 COMMON-NAME - thioredoxin peroxidase activity SYNONYMS - thiol peroxidase activity SYNONYMS - TPx activity SYNONYMS - TrxPx activity // UNIQUE-ID - GO:0016702 TYPES - GO:0016701 TYPES - GO:0051213 COMMON-NAME - oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen // UNIQUE-ID - GO:0050113 TYPES - GO:0016701 COMMON-NAME - inositol oxygenase activity SYNONYMS - meso-inositol oxygenase activity SYNONYMS - MOO activity SYNONYMS - myo-inositol oxygenase activity SYNONYMS - myo-inositol:oxygen oxidoreductase activity // UNIQUE-ID - GO:0004666 TYPES - GO:0016705 COMMON-NAME - prostaglandin-endoperoxide synthase activity SYNONYMS - (5Z,8Z,11Z,14Z)-icosa-5,8,11,14-tetraenoate,hydrogen-donor:oxygen oxidoreductase activity SYNONYMS - (PG)H synthase activity SYNONYMS - fatty acid cyclooxygenase activity SYNONYMS - PG synthetase activity SYNONYMS - prostaglandin endoperoxide synthetase activity SYNONYMS - prostaglandin G/H synthase activity SYNONYMS - prostaglandin synthase activity SYNONYMS - prostaglandin synthetase activity // UNIQUE-ID - GO:0016706 TYPES - GO:0016705 COMMON-NAME - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors // UNIQUE-ID - GO:0016717 TYPES - GO:0016705 COMMON-NAME - oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water // UNIQUE-ID - GO:0004784 TYPES - GO:0016721 COMMON-NAME - superoxide dismutase activity SYNONYMS - Mn, Fe superoxide dismutase SYNONYMS - SOD SYNONYMS - SODS SYNONYMS - superoxide:superoxide oxidoreductase activity // UNIQUE-ID - GO:0016726 TYPES - GO:0016725 COMMON-NAME - oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor // UNIQUE-ID - GO:0016727 TYPES - GO:0016725 COMMON-NAME - oxidoreductase activity, acting on CH or CH2 groups, oxygen as acceptor // UNIQUE-ID - GO:0016728 TYPES - GO:0016725 COMMON-NAME - oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor SYNONYMS - oxidoreductase activity, acting on CH or CH2 groups, disulphide as acceptor // UNIQUE-ID - GO:0004738 TYPES - GO:0016903 COMMON-NAME - pyruvate dehydrogenase activity SYNONYMS - pyruvic acid dehydrogenase activity SYNONYMS - pyruvic dehydrogenase activity // UNIQUE-ID - GO:0016620 TYPES - GO:0016903 COMMON-NAME - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor // UNIQUE-ID - GO:0016623 TYPES - GO:0016903 COMMON-NAME - oxidoreductase activity, acting on the aldehyde or oxo group of donors, oxygen as acceptor // UNIQUE-ID - GO:0016624 TYPES - GO:0016903 COMMON-NAME - oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor SYNONYMS - oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulphide as acceptor // UNIQUE-ID - GO:0030612 TYPES - GO:0030611 COMMON-NAME - arsenate reductase (thioredoxin) activity // UNIQUE-ID - GO:0008168 TYPES - GO:0016741 COMMON-NAME - methyltransferase activity SYNONYMS - methylase // UNIQUE-ID - GO:0015067 TYPES - GO:0016741 TYPES - GO:0016769 COMMON-NAME - amidinotransferase activity SYNONYMS - transamidinase activity // UNIQUE-ID - GO:0016743 TYPES - GO:0016741 COMMON-NAME - carboxyl- or carbamoyltransferase activity SYNONYMS - carboxyl- and carbamoyltransferase activity // UNIQUE-ID - GO:0004801 TYPES - GO:0016744 COMMON-NAME - transaldolase activity SYNONYMS - dihydroxyacetone transferase activity SYNONYMS - dihydroxyacetonetransferase activity SYNONYMS - glycerone transferase activity SYNONYMS - sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity // UNIQUE-ID - GO:0004802 TYPES - GO:0016744 COMMON-NAME - transketolase activity SYNONYMS - glycoaldehyde transferase activity SYNONYMS - glycolaldehydetransferase activity SYNONYMS - sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glycolaldehydetransferase activity // UNIQUE-ID - GO:0016747 TYPES - GO:0016746 COMMON-NAME - transferase activity, transferring acyl groups other than amino-acyl groups // UNIQUE-ID - GO:0016755 TYPES - GO:0016746 COMMON-NAME - transferase activity, transferring amino-acyl groups SYNONYMS - aminoacyltransferase activity // UNIQUE-ID - GO:0046912 TYPES - GO:0016746 COMMON-NAME - transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer // UNIQUE-ID - GO:0008194 TYPES - GO:0016757 COMMON-NAME - UDP-glycosyltransferase activity // UNIQUE-ID - GO:0008373 TYPES - GO:0016757 COMMON-NAME - sialyltransferase activity // UNIQUE-ID - GO:0016758 TYPES - GO:0016757 COMMON-NAME - transferase activity, transferring hexosyl groups SYNONYMS - hexosyltransferase activity // UNIQUE-ID - GO:0016763 TYPES - GO:0016757 COMMON-NAME - transferase activity, transferring pentosyl groups SYNONYMS - pentosyltransferase activity // UNIQUE-ID - GO:0004364 TYPES - GO:0016765 COMMON-NAME - glutathione transferase activity SYNONYMS - glutathione conjugation reaction SYNONYMS - glutathione S-alkyl transferase activity SYNONYMS - glutathione S-alkyltransferase activity SYNONYMS - glutathione S-aralkyltransferase activity SYNONYMS - glutathione S-aryltransferase activity SYNONYMS - glutathione S-transferase activity SYNONYMS - RX:glutathione R-transferase activity SYNONYMS - S-(hydroxyalkyl)glutathione lyase activity // UNIQUE-ID - GO:0004478 TYPES - GO:0016765 COMMON-NAME - methionine adenosyltransferase activity SYNONYMS - adenosylmethionine synthetase activity SYNONYMS - AdoMet synthetase activity SYNONYMS - ATP-methionine adenosyltransferase activity SYNONYMS - ATP:L-methionine S-adenosyltransferase activity SYNONYMS - methionine S-adenosyltransferase activity SYNONYMS - methionine-activating enzyme SYNONYMS - S-adenosyl-L-methionine synthetase activity SYNONYMS - S-adenosylmethionine synthase activity SYNONYMS - S-adenosylmethionine synthetase activity // UNIQUE-ID - GO:0004659 TYPES - GO:0016765 COMMON-NAME - prenyltransferase activity // UNIQUE-ID - GO:0004766 TYPES - GO:0016765 COMMON-NAME - spermidine synthase activity SYNONYMS - aminopropyltransferase activity SYNONYMS - putrescine aminopropyltransferase activity SYNONYMS - S-adenosylmethioninamine:putrescine 3-aminopropyltransferase activity SYNONYMS - SpeE SYNONYMS - spermidine synthetase activity // UNIQUE-ID - GO:0004811 TYPES - GO:0016765 COMMON-NAME - tRNA isopentenyltransferase activity SYNONYMS - delta2-isopentenyl pyrophosphate:transfer ribonucleic acid delta2-isopentenyltransferase activity SYNONYMS - delta2-isopentenyl pyrophosphate:tRNA-delta2-isopentenyl transferase activity SYNONYMS - IPP transferase activity SYNONYMS - isopentenyl-diphosphate:tRNA isopentenyltransferase activity SYNONYMS - transfer ribonucleate isopentenyltransferase activity // UNIQUE-ID - GO:0008817 TYPES - GO:0016765 COMMON-NAME - cob(I)yrinic acid a,c-diamide adenosyltransferase activity SYNONYMS - aquacob(I)alamin adenosyltransferase activity SYNONYMS - aquocob(I)alamin vitamin B12s adenosyltransferase activity SYNONYMS - ATP:cob(I)alamin Co-beta-adenosyltransferase activity SYNONYMS - ATP:cob(I)alamin cobeta-adenosyltransferase activity SYNONYMS - ATP:cob(I)yrinic acid-a,c-diamide cobeta-adenosyltransferase activity SYNONYMS - ATP:corrinoid adenosyltransferase activity SYNONYMS - cob(I)alamin adenosyltransferase activity SYNONYMS - CobA SYNONYMS - vitamin B12s adenosyltransferase activity // UNIQUE-ID - GO:0016768 TYPES - GO:0016765 COMMON-NAME - spermine synthase activity SYNONYMS - S-adenosylmethioninamine:spermidine 3-aminopropyltransferase activity SYNONYMS - spermidine aminopropyltransferase activity SYNONYMS - spermine synthetase activity // UNIQUE-ID - GO:0050347 TYPES - GO:0016765 COMMON-NAME - trans-octaprenyltranstransferase activity SYNONYMS - (E)-octaprenyl-diphosphate:isopentenyl-diphosphate octaprenyltranstransferase activity SYNONYMS - all-trans-nonaprenyl-diphosphate synthase activity SYNONYMS - nonaprenyl pyrophosphate synthetase activity SYNONYMS - polyprenylpyrophosphate synthetase activity SYNONYMS - solanesyl pyrophosphate synthetase activity SYNONYMS - solanesyl-diphosphate synthase activity SYNONYMS - SPP synthase activity SYNONYMS - terpenoidallyltransferase activity SYNONYMS - terpenyl pyrophosphate synthetase activity SYNONYMS - trans-prenyltransferase activity // UNIQUE-ID - GO:0008483 TYPES - GO:0016769 COMMON-NAME - transaminase activity SYNONYMS - aminotransferase activity // UNIQUE-ID - GO:0016301 TYPES - GO:0016772 COMMON-NAME - kinase activity COMMENT - Note that this term encompasses all activities that transfer a single phosphate group; although ATP is by far the most common phosphate donor, reactions using other phosphate donors are included in this term. SYNONYMS - phosphokinase activity // UNIQUE-ID - GO:0016773 TYPES - GO:0016772 COMMON-NAME - phosphotransferase activity, alcohol group as acceptor // UNIQUE-ID - GO:0016774 TYPES - GO:0016772 COMMON-NAME - phosphotransferase activity, carboxyl group as acceptor // UNIQUE-ID - GO:0016776 TYPES - GO:0016772 COMMON-NAME - phosphotransferase activity, phosphate group as acceptor // UNIQUE-ID - GO:0016778 TYPES - GO:0016772 COMMON-NAME - diphosphotransferase activity // UNIQUE-ID - GO:0016779 TYPES - GO:0016772 COMMON-NAME - nucleotidyltransferase activity // UNIQUE-ID - GO:0016780 TYPES - GO:0016772 COMMON-NAME - phosphotransferase activity, for other substituted phosphate groups // UNIQUE-ID - GO:0016781 TYPES - GO:0016772 COMMON-NAME - phosphotransferase activity, paired acceptors // UNIQUE-ID - GO:0004702 TYPES - GO:0004674 TYPES - GO:0005057 COMMON-NAME - receptor signaling protein serine/threonine kinase activity SYNONYMS - receptor signalling protein serine/threonine kinase activity // UNIQUE-ID - GO:0004716 TYPES - GO:0004713 TYPES - GO:0005057 COMMON-NAME - receptor signaling protein tyrosine kinase activity SYNONYMS - receptor signalling protein tyrosine kinase activity // UNIQUE-ID - GO:0008146 TYPES - GO:0016782 COMMON-NAME - sulfotransferase activity SYNONYMS - sulphotransferase activity // UNIQUE-ID - GO:0008410 TYPES - GO:0016782 COMMON-NAME - CoA-transferase activity // UNIQUE-ID - GO:0016783 TYPES - GO:0016782 COMMON-NAME - sulfurtransferase activity SYNONYMS - sulphurtransferase activity // UNIQUE-ID - GO:0009003 TYPES - GO:0008233 COMMON-NAME - signal peptidase activity // UNIQUE-ID - GO:0070011 TYPES - GO:0008233 COMMON-NAME - peptidase activity, acting on L-amino acid peptides // UNIQUE-ID - GO:0008236 TYPES - GO:0070011 TYPES - GO:0017171 COMMON-NAME - serine-type peptidase activity SYNONYMS - serine protease // UNIQUE-ID - GO:0004091 TYPES - GO:0016788 COMMON-NAME - carboxylesterase activity SYNONYMS - Ali-esterase activity SYNONYMS - ali-esterase activity SYNONYMS - alpha-carboxylesterase activity SYNONYMS - B-esterase activity SYNONYMS - butyrate esterase activity SYNONYMS - butyryl esterase activity SYNONYMS - carboxyesterase activity SYNONYMS - carboxyl ester hydrolase activity SYNONYMS - carboxylate esterase activity SYNONYMS - carboxylic acid esterase activity SYNONYMS - carboxylic ester hydrolase activity SYNONYMS - carboxylic esterase activity SYNONYMS - carboxylic-ester hydrolase activity SYNONYMS - cocaine esterase activity SYNONYMS - esterase A SYNONYMS - esterase B SYNONYMS - methylbutyrase activity SYNONYMS - methylbutyrate esterase SYNONYMS - monobutyrase activity SYNONYMS - nonspecific carboxylesterase activity SYNONYMS - procaine esterase activity SYNONYMS - propionyl esterase SYNONYMS - serine esterase activity SYNONYMS - triacetin esterase SYNONYMS - vitamin A esterase // UNIQUE-ID - GO:0004518 TYPES - GO:0016788 COMMON-NAME - nuclease activity COMMENT - Consider also annotating to the molecular function term 'nucleic acid binding ; GO:0003676'. Note that 'tRNA nucleotidyltransferase activity ; GO:0009022', also known as 'ribonuclease PH', does not have parentage in the 'nuclease activity' branch of the ontology because both GO and the Enzyme Commission define nuclease activity as a type of hydrolysis. // UNIQUE-ID - GO:0008484 TYPES - GO:0016788 COMMON-NAME - sulfuric ester hydrolase activity SYNONYMS - sulfatase activity SYNONYMS - sulphuric ester hydrolase activity // UNIQUE-ID - GO:0016298 TYPES - GO:0016788 COMMON-NAME - lipase activity // UNIQUE-ID - GO:0016790 TYPES - GO:0016788 COMMON-NAME - thiolester hydrolase activity SYNONYMS - thiolesterase activity // UNIQUE-ID - GO:0042578 TYPES - GO:0016788 COMMON-NAME - phosphoric ester hydrolase activity // UNIQUE-ID - GO:0004553 TYPES - GO:0016798 COMMON-NAME - hydrolase activity, hydrolyzing O-glycosyl compounds SYNONYMS - O-glucosyl hydrolase activity // UNIQUE-ID - GO:0016799 TYPES - GO:0016798 COMMON-NAME - hydrolase activity, hydrolyzing N-glycosyl compounds // UNIQUE-ID - GO:0016803 TYPES - GO:0016801 COMMON-NAME - ether hydrolase activity // UNIQUE-ID - GO:0016811 TYPES - GO:0016810 COMMON-NAME - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides // UNIQUE-ID - GO:0016812 TYPES - GO:0016810 COMMON-NAME - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides // UNIQUE-ID - GO:0016813 TYPES - GO:0016810 COMMON-NAME - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines // UNIQUE-ID - GO:0016814 TYPES - GO:0016810 COMMON-NAME - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines // UNIQUE-ID - GO:0003726 TYPES - GO:0004000 COMMON-NAME - double-stranded RNA adenosine deaminase activity SYNONYMS - double-stranded RNA specific editase activity // UNIQUE-ID - GO:0008251 TYPES - GO:0004000 COMMON-NAME - tRNA-specific adenosine deaminase activity SYNONYMS - tRNA-adenosine deaminase activity // UNIQUE-ID - GO:0016818 TYPES - GO:0016817 COMMON-NAME - hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides // UNIQUE-ID - GO:0042626 TYPES - GO:0015405 TYPES - GO:0016820 TYPES - GO:0043492 COMMON-NAME - ATPase activity, coupled to transmembrane movement of substances COMMENT - Consider also annotating to the molecular function term 'ATP binding ; GO:0005524'. SYNONYMS - ABC transporter SYNONYMS - ABC-type efflux permease activity SYNONYMS - ABC-type efflux porter activity SYNONYMS - ABC-type uptake permease activity SYNONYMS - ATP binding cassette transporter SYNONYMS - ATP-binding cassette (ABC) transporter activity SYNONYMS - ATP-binding cassette transporter SYNONYMS - mating pheromone exporter // UNIQUE-ID - GO:0016823 TYPES - GO:0016822 COMMON-NAME - hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances // UNIQUE-ID - GO:0016250 TYPES - GO:0016826 COMMON-NAME - N-sulfoglucosamine sulfohydrolase activity SYNONYMS - 2-desoxy-D-glucoside-2-sulphamate sulphohydrolase (sulphamate sulphohydrolase) SYNONYMS - heparin sulfamidase activity SYNONYMS - N-sulfo-D-glucosamine sulfohydrolase activity SYNONYMS - N-sulphoglucosamine sulphohydrolase activity SYNONYMS - sulfoglucosamine sulfamidase activity SYNONYMS - sulphamidase activity // UNIQUE-ID - GO:0033558 TYPES - GO:0019213 COMMON-NAME - protein deacetylase activity // UNIQUE-ID - GO:0016831 TYPES - GO:0016830 COMMON-NAME - carboxy-lyase activity SYNONYMS - decarboxylase activity // UNIQUE-ID - GO:0016832 TYPES - GO:0016830 COMMON-NAME - aldehyde-lyase activity SYNONYMS - aldolase activity // UNIQUE-ID - GO:0016833 TYPES - GO:0016830 COMMON-NAME - oxo-acid-lyase activity // UNIQUE-ID - GO:0003906 TYPES - GO:0016835 COMMON-NAME - DNA-(apurinic or apyrimidinic site) lyase activity COMMENT - Consider also annotating to the molecular function term 'damaged DNA binding ; GO:0003684'. SYNONYMS - AP endonuclease class I activity SYNONYMS - AP lyase activity SYNONYMS - AP site-DNA 5'-phosphomonoester-lyase activity SYNONYMS - deoxyribonuclease (apurinic or apyrimidinic) activity SYNONYMS - DNA-(apurinic or apyrimidinic site) 5'-phosphomonoester-lyase activity SYNONYMS - E. coli endonuclease III SYNONYMS - E.coli endonuclease III activity SYNONYMS - endodeoxyribonuclease (apurinic or apyrimidinic) activity SYNONYMS - endonuclease VIII activity SYNONYMS - micrococcus luteus UV endonuclease SYNONYMS - Micrococcus luteus UV endonuclease activity SYNONYMS - Phage-T(4) UV endonuclease activity SYNONYMS - phage-T4 UV endonuclease SYNONYMS - Phage-T4 UV endonuclease activity SYNONYMS - X-ray endonuclease III // UNIQUE-ID - GO:0016836 TYPES - GO:0016835 COMMON-NAME - hydro-lyase activity // UNIQUE-ID - GO:0016838 TYPES - GO:0016835 COMMON-NAME - carbon-oxygen lyase activity, acting on phosphates // UNIQUE-ID - GO:0016841 TYPES - GO:0016840 COMMON-NAME - ammonia-lyase activity // UNIQUE-ID - GO:0016842 TYPES - GO:0016840 COMMON-NAME - amidine-lyase activity // UNIQUE-ID - GO:0016847 TYPES - GO:0016846 COMMON-NAME - 1-aminocyclopropane-1-carboxylate synthase activity SYNONYMS - 1-aminocyclopropane-1-carboxylate synthetase activity SYNONYMS - 1-aminocyclopropane-1-carboxylic acid synthase activity SYNONYMS - 1-aminocyclopropanecarboxylate synthase activity SYNONYMS - ACC synthase activity SYNONYMS - aminocyclopropanecarboxylate synthase activity SYNONYMS - aminocyclopropanecarboxylic acid synthase activity SYNONYMS - S-adenosyl-L-methionine methylthioadenosine-lyase (1-aminocyclopropane-1-carboxylate-forming) SYNONYMS - S-adenosyl-L-methionine methylthioadenosine-lyase activity // UNIQUE-ID - GO:0047804 TYPES - GO:0016846 COMMON-NAME - cysteine-S-conjugate beta-lyase activity SYNONYMS - cysteine conjugate beta-lyase activity SYNONYMS - cysteine-S-conjugate b-lyase activity SYNONYMS - glutamine transaminase K/cysteine conjugate beta-lyase activity SYNONYMS - L-cysteine-S-conjugate thiol-lyase (deaminating) activity SYNONYMS - L-cysteine-S-conjugate thiol-lyase (deaminating; pyruvate-forming) // UNIQUE-ID - GO:0003917 TYPES - GO:0003916 COMMON-NAME - DNA topoisomerase type I activity COMMENT - Note that a further distinction, between type IA and type IB topoisomerases, is based on sequence or structural similarity between gene products that possess type I catalytic activity. SYNONYMS - deoxyribonucleate topoisomerase SYNONYMS - DNA topoisomerase I activity SYNONYMS - nicking-closing enzyme activity SYNONYMS - omega-protein activity SYNONYMS - relaxing enzyme activity SYNONYMS - swivelase activity SYNONYMS - topoisomerase SYNONYMS - type I DNA topoisomerase activity SYNONYMS - type I topoisomerase activity SYNONYMS - untwisting enzyme activity // UNIQUE-ID - GO:0003918 TYPES - GO:0003916 COMMON-NAME - DNA topoisomerase (ATP-hydrolyzing) activity SYNONYMS - deoxyribonucleate topoisomerase SYNONYMS - deoxyribonucleic topoisomerase activity SYNONYMS - DNA gyrase activity SYNONYMS - DNA topoisomerase (ATP-hydrolysing) SYNONYMS - DNA topoisomerase II SYNONYMS - DNA topoisomerase IV activity SYNONYMS - DNA topoisomerase type II activity SYNONYMS - DNA-gyrase activity SYNONYMS - topoisomerase SYNONYMS - topoisomerase II SYNONYMS - type II DNA topoisomerase activity // UNIQUE-ID - GO:0016855 TYPES - GO:0016854 COMMON-NAME - racemase and epimerase activity, acting on amino acids and derivatives // UNIQUE-ID - GO:0016857 TYPES - GO:0016854 COMMON-NAME - racemase and epimerase activity, acting on carbohydrates and derivatives // UNIQUE-ID - GO:0003755 TYPES - GO:0016859 COMMON-NAME - peptidyl-prolyl cis-trans isomerase activity SYNONYMS - cis-trans proline isomerase activity SYNONYMS - cyclophilin activity SYNONYMS - cyclophilin-type peptidyl-prolyl cis-trans isomerase activity SYNONYMS - FK506-sensitive peptidyl-prolyl cis-trans isomerase SYNONYMS - immunophilin SYNONYMS - parvulin SYNONYMS - peptide bond isomerase activity SYNONYMS - peptidyl-prolyl isomerase B reaction SYNONYMS - peptidylproline cis-trans-isomerase activity SYNONYMS - peptidylprolyl cis-trans isomerase activity SYNONYMS - peptidylprolyl isomerase activity SYNONYMS - PPIase activity SYNONYMS - rotamase activity // UNIQUE-ID - GO:0016034 TYPES - GO:0016859 COMMON-NAME - maleylacetoacetate isomerase activity SYNONYMS - 4-maleylacetoacetate cis-trans-isomerase activity SYNONYMS - maleylacetoacetic isomerase activity SYNONYMS - maleylacetone cis-trans-isomerase activity SYNONYMS - maleylacetone isomerase activity // UNIQUE-ID - GO:0004667 TYPES - GO:0016860 COMMON-NAME - prostaglandin-D synthase activity SYNONYMS - (5,13)-(15S)-9alpha,11alpha-epidioxy-15-hydroxyprosta-5,13-dienoate D-isomerase activity SYNONYMS - PGD2 synthase activity SYNONYMS - PGH-PGD isomerase activity SYNONYMS - prostaglandin D2 synthase activity SYNONYMS - prostaglandin-H2 D-isomerase activity SYNONYMS - prostaglandin-R-prostaglandin D isomerase activity // UNIQUE-ID - GO:0004796 TYPES - GO:0016860 COMMON-NAME - thromboxane-A synthase activity SYNONYMS - (5Z,13E)-(15S)-9alpha,11alpha-epidioxy-15-hydroxyprosta-5,13-dienoate isomerase activity SYNONYMS - (5Z,13E)-(15S)-9alpha,11alpha-epidioxy-15-hydroxyprosta-5,13-dienoate thromboxane-A2-isomerase activity SYNONYMS - cytochrome P450 CYP5 SYNONYMS - thromboxane synthase activity SYNONYMS - thromboxane synthetase activity // UNIQUE-ID - GO:0008116 TYPES - GO:0016860 COMMON-NAME - prostaglandin-I synthase activity SYNONYMS - (5Z,13E)-(15S)-9alpha,11alpha-epidioxy-15-hydroxyprosta-5,13-dienoate 6-isomerase activity SYNONYMS - cytochrome P450 CYP8A1 SYNONYMS - PGI(2) synthase activity SYNONYMS - PGI(2) synthetase activity SYNONYMS - PGI2 synthase activity SYNONYMS - PGI2 synthetase activity SYNONYMS - prostacyclin synthase activity SYNONYMS - prostacycline synthetase activity SYNONYMS - prostagladin I2 synthetase activity // UNIQUE-ID - GO:0016862 TYPES - GO:0016860 COMMON-NAME - intramolecular oxidoreductase activity, interconverting keto- and enol-groups SYNONYMS - intramolecular isomerase activity, interconverting keto- and enol-groups // UNIQUE-ID - GO:0016863 TYPES - GO:0016860 COMMON-NAME - intramolecular oxidoreductase activity, transposing C=C bonds SYNONYMS - intramolecular isomerase activity, transposing C=C bonds // UNIQUE-ID - GO:0050220 TYPES - GO:0016860 COMMON-NAME - prostaglandin-E synthase activity SYNONYMS - (5Z,13E)-(15S)-9alpha,11alpha-epidioxy-15-hydroxyprosta-5,13-dienoate E-isomerase activity SYNONYMS - endoperoxide isomerase activity SYNONYMS - PGE isomerase activity SYNONYMS - PGE2 isomerase activity SYNONYMS - PGH-PGE isomerase activity SYNONYMS - prostaglandin endoperoxide E isomerase activity SYNONYMS - prostaglandin endoperoxide E2 isomerase activity SYNONYMS - prostaglandin H-E isomerase activity SYNONYMS - prostaglandin R-prostaglandin E isomerase activity SYNONYMS - Prostaglandin-H(2) E-isomerase activity SYNONYMS - prostaglandin-H2 E-isomerase activity // UNIQUE-ID - GO:0009982 TYPES - GO:0016866 COMMON-NAME - pseudouridine synthase activity COMMENT - Note that this term should not be confused with 'pseudouridylate synthase activity ; GO:0004730', which refers to the formation of free pseudouridine from uracil and ribose-5-phosphate. // UNIQUE-ID - GO:0016868 TYPES - GO:0016866 COMMON-NAME - intramolecular transferase activity, phosphotransferases SYNONYMS - phosphomutase activity // UNIQUE-ID - GO:0031559 TYPES - GO:0016866 COMMON-NAME - oxidosqualene cyclase activity COMMENT - Note that the phrase 'oxidosqualene cyclase' has been used to refer to enzymes that catalyze the reaction represented by 'lanosterol synthase activity ; GO:0000250'. // UNIQUE-ID - GO:0016876 TYPES - GO:0016875 COMMON-NAME - ligase activity, forming aminoacyl-tRNA and related compounds // UNIQUE-ID - GO:0015645 TYPES - GO:0016877 COMMON-NAME - fatty-acid ligase activity SYNONYMS - acid:CoA ligase (AMP-forming) activity SYNONYMS - acyl coenzyme A synthetase activity SYNONYMS - acyl-coenzyme A ligase activity SYNONYMS - fatty acid CoA ligase activity SYNONYMS - fatty acyl-coenzyme A synthetase activity // UNIQUE-ID - GO:0016405 TYPES - GO:0016877 COMMON-NAME - CoA-ligase activity // UNIQUE-ID - GO:0016878 TYPES - GO:0016877 COMMON-NAME - acid-thiol ligase activity // UNIQUE-ID - GO:0003883 TYPES - GO:0016879 COMMON-NAME - CTP synthase activity SYNONYMS - CTP synthetase activity SYNONYMS - cytidine 5'-triphosphate synthetase activity SYNONYMS - cytidine triphosphate synthetase activity SYNONYMS - uridine triphosphate aminase activity SYNONYMS - UTP--ammonia ligase activity SYNONYMS - UTP:ammonia ligase (ADP-forming) // UNIQUE-ID - GO:0004019 TYPES - GO:0016879 COMMON-NAME - adenylosuccinate synthase activity SYNONYMS - adenylosuccinate synthetase activity SYNONYMS - IMP--aspartate ligase activity SYNONYMS - IMP:L-aspartate ligase (GDP-forming) SYNONYMS - succino-AMP synthetase activity SYNONYMS - succinoadenylic kinosynthetase activity // UNIQUE-ID - GO:0004055 TYPES - GO:0016879 COMMON-NAME - argininosuccinate synthase activity SYNONYMS - arginine succinate synthetase activity SYNONYMS - argininosuccinate synthetase activity SYNONYMS - argininosuccinic acid synthetase activity SYNONYMS - arginosuccinate synthetase activity SYNONYMS - citrulline--aspartate ligase activity SYNONYMS - L-citrulline:L-aspartate ligase (AMP-forming) // UNIQUE-ID - GO:0004075 TYPES - GO:0016879 COMMON-NAME - biotin carboxylase activity SYNONYMS - biotin carboxylase (component of acetyl CoA carboxylase) activity SYNONYMS - biotin-carboxyl-carrier-protein:carbon-dioxide ligase (ADP-forming) activity // UNIQUE-ID - GO:0004086 TYPES - GO:0016879 COMMON-NAME - carbamoyl-phosphate synthase activity SYNONYMS - carbamoyl phosphate synthase activity // UNIQUE-ID - GO:0004329 TYPES - GO:0016879 COMMON-NAME - formate-tetrahydrofolate ligase activity SYNONYMS - 10-formyltetrahydrofolate synthetase activity SYNONYMS - formate:tetrahydrofolate ligase (ADP-forming) SYNONYMS - formyltetrahydrofolate synthetase activity SYNONYMS - tetrahydrofolate formylase activity SYNONYMS - tetrahydrofolic formylase activity // UNIQUE-ID - GO:0004637 TYPES - GO:0016879 COMMON-NAME - phosphoribosylamine-glycine ligase activity SYNONYMS - 2-amino-N-ribosylacetamide 5'-phosphate kinosynthase activity SYNONYMS - 5'-phosphoribosylglycinamide synthetase activity SYNONYMS - 5-phospho-D-ribosylamine:glycine ligase (ADP-forming) SYNONYMS - GAR SYNONYMS - GAR synthetase activity SYNONYMS - GARS activity SYNONYMS - glycinamide ribonucleotide synthetase activity SYNONYMS - glycineamide ribonucleotide synthetase activity SYNONYMS - phosphoribosylglycinamide synthetase activity SYNONYMS - phosphoribosylglycineamide synthetase activity // UNIQUE-ID - GO:0016880 TYPES - GO:0016879 COMMON-NAME - acid-ammonia (or amide) ligase activity SYNONYMS - amide synthase activity // UNIQUE-ID - GO:0016881 TYPES - GO:0016879 COMMON-NAME - acid-amino acid ligase activity SYNONYMS - peptide synthase activity // UNIQUE-ID - GO:0016882 TYPES - GO:0016879 COMMON-NAME - cyclo-ligase activity // UNIQUE-ID - GO:0016884 TYPES - GO:0016879 COMMON-NAME - carbon-nitrogen ligase activity, with glutamine as amido-N-donor // UNIQUE-ID - GO:0016979 TYPES - GO:0016879 COMMON-NAME - lipoate-protein ligase activity SYNONYMS - lipoate-protein ligase A activity SYNONYMS - lipoate-protein ligase B activity // UNIQUE-ID - GO:0018271 TYPES - GO:0016879 COMMON-NAME - biotin-protein ligase activity SYNONYMS - biotin-apoprotein ligase activity // UNIQUE-ID - GO:0004736 TYPES - GO:0016885 COMMON-NAME - pyruvate carboxylase activity SYNONYMS - pyruvate:carbon-dioxide ligase (ADP-forming) SYNONYMS - pyruvic carboxylase activity // UNIQUE-ID - GO:0016421 TYPES - GO:0016885 COMMON-NAME - CoA carboxylase activity // UNIQUE-ID - GO:0003909 TYPES - GO:0016886 COMMON-NAME - DNA ligase activity // UNIQUE-ID - GO:0030345 TYPES - GO:0030021 COMMON-NAME - structural constituent of tooth enamel // UNIQUE-ID - GO:0005309 TYPES - GO:0005308 TYPES - GO:0005328 COMMON-NAME - creatine:sodium symporter activity SYNONYMS - sodium/chloride-dependent creatine transporter // UNIQUE-ID - GO:0005330 TYPES - GO:0005328 TYPES - GO:0005329 COMMON-NAME - dopamine:sodium symporter activity SYNONYMS - sodium/dopamine symporter // UNIQUE-ID - GO:0005335 TYPES - GO:0005328 COMMON-NAME - serotonin:sodium symporter activity SYNONYMS - sodium/serotonin symporter // UNIQUE-ID - GO:0005369 TYPES - GO:0005328 TYPES - GO:0005343 TYPES - GO:0005368 COMMON-NAME - taurine:sodium symporter activity SYNONYMS - sodium/chloride-dependent taurine transporter // UNIQUE-ID - GO:0015559 TYPES - GO:0015239 COMMON-NAME - multidrug efflux pump activity // UNIQUE-ID - GO:0015520 TYPES - GO:0008493 TYPES - GO:0015307 COMMON-NAME - tetracycline:hydrogen antiporter activity SYNONYMS - tetracyclin:hydrogen antiporter activity SYNONYMS - tetracyclin:proton antiporter activity SYNONYMS - tetracycline:proton antiporter // UNIQUE-ID - GO:0008493 TYPES - GO:0042895 COMMON-NAME - tetracycline transporter activity SYNONYMS - tetracyclin transporter activity // UNIQUE-ID - GO:0015267 TYPES - GO:0022803 COMMON-NAME - channel activity SYNONYMS - alpha-type channel activity SYNONYMS - channel-forming toxin activity SYNONYMS - channel/pore class transporter activity SYNONYMS - nonselective channel activity SYNONYMS - pore activity SYNONYMS - pore class transporter activity // UNIQUE-ID - GO:0015250 TYPES - GO:0005372 TYPES - GO:0022838 COMMON-NAME - water channel activity SYNONYMS - aquaporin // UNIQUE-ID - GO:0005275 TYPES - GO:0022804 COMMON-NAME - amine transmembrane transporter activity SYNONYMS - amine/amide/polyamine channel activity SYNONYMS - amine/polyamine transmembrane transporter activity SYNONYMS - amino acid-polyamine transmembrane transporter activity // UNIQUE-ID - GO:0015291 TYPES - GO:0022804 COMMON-NAME - secondary active transmembrane transporter activity SYNONYMS - active transporter SYNONYMS - coupled carrier SYNONYMS - electrochemical potential-driven transporter activity SYNONYMS - galactose/glucose (methylgalactoside) porter activity SYNONYMS - heavy metal ion porter activity SYNONYMS - nitrite/nitrate porter activity SYNONYMS - porter activity SYNONYMS - porters SYNONYMS - secondary carrier-type facilitators // UNIQUE-ID - GO:0015399 TYPES - GO:0022804 COMMON-NAME - primary active transmembrane transporter activity // UNIQUE-ID - GO:0015450 TYPES - GO:0008320 TYPES - GO:0015405 TYPES - GO:0022884 COMMON-NAME - P-P-bond-hydrolysis-driven protein transmembrane transporter activity SYNONYMS - protein translocase activity // UNIQUE-ID - GO:0005342 TYPES - GO:0022891 COMMON-NAME - organic acid transmembrane transporter activity // UNIQUE-ID - GO:0015075 TYPES - GO:0022891 COMMON-NAME - ion transmembrane transporter activity SYNONYMS - ion transporter activity // UNIQUE-ID - GO:0015144 TYPES - GO:0022891 COMMON-NAME - carbohydrate transmembrane transporter activity SYNONYMS - sugar transporter // UNIQUE-ID - GO:0015204 TYPES - GO:0022891 TYPES - GO:0042887 COMMON-NAME - urea transmembrane transporter activity SYNONYMS - urea transporter activity // UNIQUE-ID - GO:0015932 TYPES - GO:0022891 COMMON-NAME - nucleobase, nucleoside, nucleotide and nucleic acid transmembrane transporter activity // UNIQUE-ID - GO:0022884 TYPES - GO:0022891 COMMON-NAME - macromolecule transmembrane transporter activity // UNIQUE-ID - GO:0005548 TYPES - GO:0005319 COMMON-NAME - phospholipid transporter activity // UNIQUE-ID - GO:0015248 TYPES - GO:0005319 COMMON-NAME - sterol transporter activity // UNIQUE-ID - GO:0015198 TYPES - GO:0015197 COMMON-NAME - oligopeptide transporter activity // UNIQUE-ID - GO:0015227 TYPES - GO:0015226 COMMON-NAME - acyl carnitine transporter activity SYNONYMS - acylcarnitine transporter activity // UNIQUE-ID - GO:0019001 TYPES - GO:0017076 COMMON-NAME - guanyl nucleotide binding // UNIQUE-ID - GO:0030554 TYPES - GO:0001883 TYPES - GO:0017076 COMMON-NAME - adenyl nucleotide binding // UNIQUE-ID - GO:0032555 TYPES - GO:0032553 TYPES - GO:0017076 COMMON-NAME - purine ribonucleotide binding // UNIQUE-ID - GO:0019003 TYPES - GO:0032561 TYPES - GO:0001883 COMMON-NAME - GDP binding // UNIQUE-ID - GO:0030553 TYPES - GO:0019002 TYPES - GO:0030551 COMMON-NAME - cGMP binding SYNONYMS - 3',5' cGMP binding SYNONYMS - 3',5'-cGMP binding SYNONYMS - cyclic GMP binding // UNIQUE-ID - GO:0050660 TYPES - GO:0030554 TYPES - GO:0050662 COMMON-NAME - FAD binding SYNONYMS - flavin adenine dinucleotide binding SYNONYMS - flavine-adenine dinucleotide binding // UNIQUE-ID - GO:0030552 TYPES - GO:0016208 TYPES - GO:0030551 COMMON-NAME - cAMP binding SYNONYMS - 3',5' cAMP binding SYNONYMS - 3',5'-cAMP binding SYNONYMS - adenosine 3',5'-cyclophosphate binding SYNONYMS - cyclic AMP binding // UNIQUE-ID - GO:0001872 TYPES - GO:0030247 COMMON-NAME - zymosan binding // UNIQUE-ID - GO:0001873 TYPES - GO:0008329 TYPES - GO:0030247 COMMON-NAME - polysaccharide receptor activity // UNIQUE-ID - GO:0005539 TYPES - GO:0030247 COMMON-NAME - glycosaminoglycan binding // UNIQUE-ID - GO:0008061 TYPES - GO:0030247 COMMON-NAME - chitin binding // UNIQUE-ID - GO:0016019 TYPES - GO:0008329 TYPES - GO:0042834 COMMON-NAME - peptidoglycan receptor activity COMMENT - Note that only peptidoglycan recognition proteins with receptor activity should be annotated to this term; otherwise use 'peptidoglycan binding ; GO:0042834' instead. SYNONYMS - peptidoglycan recognition activity // UNIQUE-ID - GO:0003684 TYPES - GO:0003677 COMMON-NAME - damaged DNA binding SYNONYMS - DNA repair enzyme SYNONYMS - DNA repair protein // UNIQUE-ID - GO:0043565 TYPES - GO:0003677 COMMON-NAME - sequence-specific DNA binding SYNONYMS - sequence specific DNA binding // UNIQUE-ID - GO:0043566 TYPES - GO:0003677 COMMON-NAME - structure-specific DNA binding SYNONYMS - structure specific DNA binding // UNIQUE-ID - GO:0003725 TYPES - GO:0003723 COMMON-NAME - double-stranded RNA binding // UNIQUE-ID - GO:0003727 TYPES - GO:0003723 COMMON-NAME - single-stranded RNA binding // UNIQUE-ID - GO:0003729 TYPES - GO:0003723 COMMON-NAME - mRNA binding // UNIQUE-ID - GO:0008187 TYPES - GO:0003723 COMMON-NAME - poly-pyrimidine tract binding // UNIQUE-ID - GO:0008312 TYPES - GO:0003723 COMMON-NAME - 7S RNA binding // UNIQUE-ID - GO:0017069 TYPES - GO:0003723 COMMON-NAME - snRNA binding SYNONYMS - small nuclear RNA binding // UNIQUE-ID - GO:0017091 TYPES - GO:0003723 COMMON-NAME - AU-rich element binding SYNONYMS - ARE binding SYNONYMS - AU-specific RNA binding // UNIQUE-ID - GO:0019843 TYPES - GO:0003723 COMMON-NAME - rRNA binding // UNIQUE-ID - GO:0030515 TYPES - GO:0003723 COMMON-NAME - snoRNA binding // UNIQUE-ID - GO:0031202 TYPES - GO:0003723 COMMON-NAME - RNA splicing factor activity, transesterification mechanism COMMENT - Note that nuclear mRNA, Group I, Group II, and Group III introns are all spliced by a series of two transesterification reactions that occur within the RNA itself, or between two RNAs in trans splicing. Some of these require one or more proteins to stabilize the catalytic conformation, while others are autocatalytic. Note that tRNA introns are spliced by a different catalytic mechanism. SYNONYMS - pre-mRNA splicing factor activity // UNIQUE-ID - GO:0035197 TYPES - GO:0003723 COMMON-NAME - siRNA binding SYNONYMS - small interfering RNA binding // UNIQUE-ID - GO:0035198 TYPES - GO:0003723 COMMON-NAME - miRNA binding SYNONYMS - microRNA binding // UNIQUE-ID - GO:0003747 TYPES - GO:0008079 COMMON-NAME - translation release factor activity // UNIQUE-ID - GO:0031493 TYPES - GO:0031491 TYPES - GO:0042393 COMMON-NAME - nucleosomal histone binding // UNIQUE-ID - GO:0030883 TYPES - GO:0030882 COMMON-NAME - endogenous lipid antigen binding // UNIQUE-ID - GO:0042606 TYPES - GO:0042605 COMMON-NAME - endogenous peptide antigen binding COMMENT - Note that this term can be used to describe binding to the peptide expressed by an MHC molecule. // UNIQUE-ID - GO:0042607 TYPES - GO:0042605 COMMON-NAME - exogenous peptide antigen binding COMMENT - Note that this term can be used to describe binding to the peptide expressed by an MHC molecule. SYNONYMS - alpha-beta T cell receptor activity SYNONYMS - gamma-delta T cell receptor activity SYNONYMS - T cell receptor activity // UNIQUE-ID - GO:0019905 TYPES - GO:0000149 COMMON-NAME - syntaxin binding // UNIQUE-ID - GO:0004875 TYPES - GO:0001848 TYPES - GO:0004888 COMMON-NAME - complement receptor activity COMMENT - Note that the complement cascade includes all of the components involved in the classical complement pathway, the alternative complement pathway, and the lectin complement pathway, as well as the common components of all three pathways. // UNIQUE-ID - GO:0008262 TYPES - GO:0005049 COMMON-NAME - importin-alpha export receptor activity SYNONYMS - importin-alpha binding // UNIQUE-ID - GO:0001664 TYPES - GO:0005102 COMMON-NAME - G-protein-coupled receptor binding SYNONYMS - G protein coupled receptor binding SYNONYMS - G protein coupled receptor ligand SYNONYMS - G-protein-coupled receptor ligand // UNIQUE-ID - GO:0005112 TYPES - GO:0005102 COMMON-NAME - Notch binding SYNONYMS - N binding SYNONYMS - N ligand SYNONYMS - Notch ligand SYNONYMS - Notch receptor binding // UNIQUE-ID - GO:0005118 TYPES - GO:0005102 COMMON-NAME - sevenless binding SYNONYMS - sev binding SYNONYMS - sev ligand SYNONYMS - sevenless ligand // UNIQUE-ID - GO:0005125 TYPES - GO:0005102 COMMON-NAME - cytokine activity // UNIQUE-ID - GO:0005154 TYPES - GO:0005102 COMMON-NAME - epidermal growth factor receptor binding SYNONYMS - EGF SYNONYMS - EGF receptor binding SYNONYMS - EGF receptor ligand SYNONYMS - EGFR binding SYNONYMS - epidermal growth factor SYNONYMS - epidermal growth factor receptor ligand SYNONYMS - TGF-alpha receptor binding SYNONYMS - TGFalpha receptor binding SYNONYMS - transforming growth factor alpha SYNONYMS - transforming growth factor alpha receptor binding SYNONYMS - transforming growth factor alpha receptor ligand // UNIQUE-ID - GO:0005158 TYPES - GO:0005102 TYPES - GO:0032403 COMMON-NAME - insulin receptor binding SYNONYMS - insulin receptor ligand // UNIQUE-ID - GO:0005160 TYPES - GO:0005102 COMMON-NAME - transforming growth factor beta receptor binding SYNONYMS - activin SYNONYMS - inhibin SYNONYMS - TGF-beta receptor binding SYNONYMS - TGFbeta receptor binding SYNONYMS - transforming growth factor beta SYNONYMS - transforming growth factor beta ligand binding to type I receptor SYNONYMS - transforming growth factor beta ligand binding to type II receptor SYNONYMS - transforming growth factor beta receptor anchoring activity SYNONYMS - transforming growth factor beta receptor ligand // UNIQUE-ID - GO:0005178 TYPES - GO:0005102 TYPES - GO:0032403 COMMON-NAME - integrin binding SYNONYMS - integrin ligand // UNIQUE-ID - GO:0005179 TYPES - GO:0005102 COMMON-NAME - hormone activity SYNONYMS - cAMP generating peptide activity SYNONYMS - glycopeptide hormone SYNONYMS - lipopeptide hormone SYNONYMS - peptide hormone // UNIQUE-ID - GO:0008083 TYPES - GO:0005102 COMMON-NAME - growth factor activity // UNIQUE-ID - GO:0016922 TYPES - GO:0005102 COMMON-NAME - ligand-dependent nuclear receptor binding SYNONYMS - ligand-dependent nuclear receptor interactor activity // UNIQUE-ID - GO:0042287 TYPES - GO:0005102 COMMON-NAME - MHC protein binding COMMENT - Note that this term does not include binding to the antigen peptide bound to the MHC protein, for this also annotate to 'peptide antigen binding ; GO:0042605' or one of its children. SYNONYMS - major histocompatibility complex binding SYNONYMS - major histocompatibility complex ligand // UNIQUE-ID - GO:0046703 TYPES - GO:0005102 COMMON-NAME - natural killer cell lectin-like receptor binding SYNONYMS - KLRC4 receptor binding SYNONYMS - NK cell lectin-like receptor binding SYNONYMS - NKG2D receptor binding // UNIQUE-ID - GO:0046875 TYPES - GO:0005102 COMMON-NAME - ephrin receptor binding SYNONYMS - Eph receptor binding SYNONYMS - ephrin SYNONYMS - GPI-linked ephrin SYNONYMS - transmembrane ephrin // UNIQUE-ID - GO:0048019 TYPES - GO:0005102 TYPES - GO:0030547 COMMON-NAME - receptor antagonist activity // UNIQUE-ID - GO:0050750 TYPES - GO:0005102 COMMON-NAME - low-density lipoprotein receptor binding SYNONYMS - LDL receptor binding // UNIQUE-ID - GO:0050811 TYPES - GO:0005102 COMMON-NAME - GABA receptor binding SYNONYMS - 4-aminobutanoate receptor binding SYNONYMS - 4-aminobutyrate receptor binding SYNONYMS - diazepam binding inhibitor activity SYNONYMS - gamma-aminobutyric acid receptor binding // UNIQUE-ID - GO:0050827 TYPES - GO:0005102 COMMON-NAME - toxin receptor binding SYNONYMS - channel-forming toxin activity SYNONYMS - cytotoxin activity SYNONYMS - endotoxin activity SYNONYMS - enterotoxin activity SYNONYMS - exotoxin activity SYNONYMS - lipoprotein toxin SYNONYMS - neurotoxin activity SYNONYMS - pore-forming toxin activity SYNONYMS - toxin activity // UNIQUE-ID - GO:0051427 TYPES - GO:0005102 COMMON-NAME - hormone receptor binding // UNIQUE-ID - GO:0042809 TYPES - GO:0008134 TYPES - GO:0035257 COMMON-NAME - vitamin D receptor binding SYNONYMS - calciferol receptor binding SYNONYMS - VDR binding // UNIQUE-ID - GO:0008035 TYPES - GO:0008034 COMMON-NAME - high-density lipoprotein binding // UNIQUE-ID - GO:0030169 TYPES - GO:0008034 COMMON-NAME - low-density lipoprotein binding SYNONYMS - LDL binding // UNIQUE-ID - GO:0030228 TYPES - GO:0004888 TYPES - GO:0008034 COMMON-NAME - lipoprotein receptor activity // UNIQUE-ID - GO:0003779 TYPES - GO:0008092 COMMON-NAME - actin binding SYNONYMS - membrane associated actin binding // UNIQUE-ID - GO:0005519 TYPES - GO:0008092 COMMON-NAME - cytoskeletal regulatory protein binding // UNIQUE-ID - GO:0005523 TYPES - GO:0008092 COMMON-NAME - tropomyosin binding // UNIQUE-ID - GO:0015631 TYPES - GO:0008092 COMMON-NAME - tubulin binding // UNIQUE-ID - GO:0017022 TYPES - GO:0008092 COMMON-NAME - myosin binding SYNONYMS - myosin phosphatase myosin binding // UNIQUE-ID - GO:0019894 TYPES - GO:0008092 COMMON-NAME - kinesin binding // UNIQUE-ID - GO:0030506 TYPES - GO:0008092 COMMON-NAME - ankyrin binding // UNIQUE-ID - GO:0030507 TYPES - GO:0008092 COMMON-NAME - spectrin binding // UNIQUE-ID - GO:0030374 TYPES - GO:0003713 COMMON-NAME - ligand-dependent nuclear receptor transcription coactivator activity SYNONYMS - ligand-dependent nuclear receptor transcription co-activator activity // UNIQUE-ID - GO:0005520 TYPES - GO:0019838 COMMON-NAME - insulin-like growth factor binding SYNONYMS - IGF binding // UNIQUE-ID - GO:0017134 TYPES - GO:0019838 COMMON-NAME - fibroblast growth factor binding SYNONYMS - FGF binding // UNIQUE-ID - GO:0019966 TYPES - GO:0019838 TYPES - GO:0019965 COMMON-NAME - interleukin-1 binding SYNONYMS - IL-1 binding // UNIQUE-ID - GO:0019969 TYPES - GO:0019838 TYPES - GO:0019965 COMMON-NAME - interleukin-10 binding SYNONYMS - IL-10 binding // UNIQUE-ID - GO:0019970 TYPES - GO:0019838 TYPES - GO:0019965 COMMON-NAME - interleukin-11 binding SYNONYMS - IL-11 binding // UNIQUE-ID - GO:0019976 TYPES - GO:0019838 TYPES - GO:0019965 COMMON-NAME - interleukin-2 binding SYNONYMS - IL-2 binding // UNIQUE-ID - GO:0043121 TYPES - GO:0019838 COMMON-NAME - neurotrophin binding SYNONYMS - neurotrophin TRK receptor activity // UNIQUE-ID - GO:0048407 TYPES - GO:0019838 COMMON-NAME - platelet-derived growth factor binding SYNONYMS - PDGF binding // UNIQUE-ID - GO:0050431 TYPES - GO:0019838 TYPES - GO:0019955 COMMON-NAME - transforming growth factor beta binding SYNONYMS - TGF-beta binding SYNONYMS - TGFbeta binding SYNONYMS - transforming growth factor beta ligand binding to type I receptor SYNONYMS - transforming growth factor beta ligand binding to type II receptor // UNIQUE-ID - GO:0019900 TYPES - GO:0019899 COMMON-NAME - kinase binding // UNIQUE-ID - GO:0019902 TYPES - GO:0019899 COMMON-NAME - phosphatase binding // UNIQUE-ID - GO:0031625 TYPES - GO:0019899 COMMON-NAME - ubiquitin protein ligase binding SYNONYMS - ubiquitin ligase binding // UNIQUE-ID - GO:0035226 TYPES - GO:0019899 COMMON-NAME - glutamate-cysteine ligase catalytic subunit binding // UNIQUE-ID - GO:0042826 TYPES - GO:0019899 COMMON-NAME - histone deacetylase binding // UNIQUE-ID - GO:0050998 TYPES - GO:0019899 COMMON-NAME - nitric-oxide synthase binding SYNONYMS - NOS binding // UNIQUE-ID - GO:0051020 TYPES - GO:0019899 COMMON-NAME - GTPase binding // UNIQUE-ID - GO:0005084 TYPES - GO:0005083 TYPES - GO:0017137 COMMON-NAME - Rab escort protein activity SYNONYMS - REP // UNIQUE-ID - GO:0017124 TYPES - GO:0019904 COMMON-NAME - SH3 domain binding // UNIQUE-ID - GO:0030165 TYPES - GO:0019904 COMMON-NAME - PDZ domain binding SYNONYMS - DHR-domain binding SYNONYMS - GLGF-domain binding // UNIQUE-ID - GO:0030274 TYPES - GO:0019904 COMMON-NAME - LIM domain binding // UNIQUE-ID - GO:0042169 TYPES - GO:0019904 COMMON-NAME - SH2 domain binding // UNIQUE-ID - GO:0050733 TYPES - GO:0019904 COMMON-NAME - RS domain binding // UNIQUE-ID - GO:0019956 TYPES - GO:0019955 COMMON-NAME - chemokine binding // UNIQUE-ID - GO:0019961 TYPES - GO:0019955 COMMON-NAME - interferon binding // UNIQUE-ID - GO:0019965 TYPES - GO:0019955 COMMON-NAME - interleukin binding SYNONYMS - IL binding // UNIQUE-ID - GO:0043120 TYPES - GO:0019955 COMMON-NAME - tumor necrosis factor binding // UNIQUE-ID - GO:0030544 TYPES - GO:0031072 COMMON-NAME - Hsp70 protein binding // UNIQUE-ID - GO:0008190 TYPES - GO:0031369 COMMON-NAME - eukaryotic initiation factor 4E binding SYNONYMS - eIF4E binding // UNIQUE-ID - GO:0043130 TYPES - GO:0032182 COMMON-NAME - ubiquitin binding // UNIQUE-ID - GO:0019865 TYPES - GO:0032403 COMMON-NAME - immunoglobulin binding // UNIQUE-ID - GO:0030159 TYPES - GO:0032947 COMMON-NAME - receptor signaling complex scaffold activity SYNONYMS - receptor signaling complex scaffold protein activity SYNONYMS - receptor signalling complex scaffold activity // UNIQUE-ID - GO:0030226 TYPES - GO:0004872 TYPES - GO:0034185 COMMON-NAME - apolipoprotein receptor activity // UNIQUE-ID - GO:0042803 TYPES - GO:0042802 TYPES - GO:0046983 COMMON-NAME - protein homodimerization activity SYNONYMS - dimerization activity // UNIQUE-ID - GO:0043237 TYPES - GO:0043236 COMMON-NAME - laminin-1 binding // UNIQUE-ID - GO:0046982 TYPES - GO:0046983 COMMON-NAME - protein heterodimerization activity // UNIQUE-ID - GO:0045296 TYPES - GO:0050839 COMMON-NAME - cadherin binding // UNIQUE-ID - GO:0045309 TYPES - GO:0051219 COMMON-NAME - protein phosphorylated amino acid binding SYNONYMS - phosphoprotein amino acid binding // UNIQUE-ID - GO:0005528 TYPES - GO:0005527 COMMON-NAME - FK506 binding SYNONYMS - FK506-sensitive peptidyl-prolyl cis-trans isomerase // UNIQUE-ID - GO:0015485 TYPES - GO:0032934 TYPES - GO:0005496 COMMON-NAME - cholesterol binding // UNIQUE-ID - GO:0032934 TYPES - GO:0005496 COMMON-NAME - sterol binding // UNIQUE-ID - GO:0005544 TYPES - GO:0005543 COMMON-NAME - calcium-dependent phospholipid binding // UNIQUE-ID - GO:0008429 TYPES - GO:0005543 COMMON-NAME - phosphatidylethanolamine binding // UNIQUE-ID - GO:0035091 TYPES - GO:0005543 COMMON-NAME - phosphoinositide binding // UNIQUE-ID - GO:0005502 TYPES - GO:0016918 COMMON-NAME - 11-cis retinal binding SYNONYMS - 11-cis retinaldehyde binding SYNONYMS - vitamin A binding // UNIQUE-ID - GO:0048029 TYPES - GO:0005529 COMMON-NAME - monosaccharide binding // UNIQUE-ID - GO:0048030 TYPES - GO:0005529 COMMON-NAME - disaccharide binding // UNIQUE-ID - GO:0016594 TYPES - GO:0016597 COMMON-NAME - glycine binding SYNONYMS - aminoacetic acid binding SYNONYMS - aminoethanoic acid binding SYNONYMS - Gly binding // UNIQUE-ID - GO:0016595 TYPES - GO:0016597 COMMON-NAME - glutamate binding SYNONYMS - glutamic acid binding // UNIQUE-ID - GO:0015464 TYPES - GO:0004888 TYPES - GO:0030594 TYPES - GO:0042166 COMMON-NAME - acetylcholine receptor activity // UNIQUE-ID - GO:0042924 TYPES - GO:0042923 COMMON-NAME - neuromedin U binding SYNONYMS - NMU binding // UNIQUE-ID - GO:0016941 TYPES - GO:0001653 COMMON-NAME - natriuretic peptide receptor activity // UNIQUE-ID - GO:0008139 TYPES - GO:0005048 COMMON-NAME - nuclear localization sequence binding SYNONYMS - NLS binding SYNONYMS - nuclear localization signal binding // UNIQUE-ID - GO:0046923 TYPES - GO:0005048 COMMON-NAME - ER retention sequence binding SYNONYMS - endoplasmic reticulum retention sequence binding // UNIQUE-ID - GO:0031404 TYPES - GO:0043168 COMMON-NAME - chloride ion binding SYNONYMS - chloride binding // UNIQUE-ID - GO:0046872 TYPES - GO:0043169 COMMON-NAME - metal ion binding SYNONYMS - metal binding SYNONYMS - heavy metal binding // UNIQUE-ID - GO:0051537 TYPES - GO:0051536 COMMON-NAME - 2 iron, 2 sulfur cluster binding SYNONYMS - 2 Fe 2 S cluster binding SYNONYMS - 2 iron, 2 sulphur cluster binding SYNONYMS - 2Fe-2S cluster binding SYNONYMS - diiron disulfide cluster binding SYNONYMS - diiron disulphide cluster binding SYNONYMS - iron-sulfur cluster 2Fe-2S binding SYNONYMS - iron-sulphur cluster 2Fe-2S binding // UNIQUE-ID - GO:0051538 TYPES - GO:0051536 COMMON-NAME - 3 iron, 4 sulfur cluster binding SYNONYMS - 3 Fe 4 S cluster binding SYNONYMS - 3 iron, 4 sulphur cluster binding SYNONYMS - 3Fe-4S cluster binding SYNONYMS - iron-sulfur cluster 3Fe-4S binding SYNONYMS - iron-sulphur cluster 3Fe-4S binding SYNONYMS - triiron tetrasulfide cluster binding SYNONYMS - triiron tetrasulphide cluster binding // UNIQUE-ID - GO:0051539 TYPES - GO:0051536 COMMON-NAME - 4 iron, 4 sulfur cluster binding SYNONYMS - 4 Fe 4 S cluster binding SYNONYMS - 4 iron, 4 sulphur cluster binding SYNONYMS - 4Fe-4S cluster binding SYNONYMS - iron-sulfur cluster 4Fe-4S binding SYNONYMS - iron-sulphur cluster 4Fe-4S binding SYNONYMS - tetrairon tetrasulfide cluster binding SYNONYMS - tetrairon tetrasulphide cluster binding // UNIQUE-ID - GO:0019870 TYPES - GO:0008200 TYPES - GO:0015459 COMMON-NAME - potassium channel inhibitor activity // UNIQUE-ID - GO:0008200 TYPES - GO:0016248 COMMON-NAME - ion channel inhibitor activity // UNIQUE-ID - GO:0019871 TYPES - GO:0008200 TYPES - GO:0017080 COMMON-NAME - sodium channel inhibitor activity // UNIQUE-ID - GO:0004860 TYPES - GO:0019210 TYPES - GO:0019887 COMMON-NAME - protein kinase inhibitor activity // UNIQUE-ID - GO:0004864 TYPES - GO:0019212 COMMON-NAME - protein phosphatase inhibitor activity // UNIQUE-ID - GO:0004866 TYPES - GO:0030414 COMMON-NAME - endopeptidase inhibitor activity SYNONYMS - alpha-2 macroglobulin SYNONYMS - endoproteinase inhibitor SYNONYMS - proteinase inhibitor // UNIQUE-ID - GO:0004859 TYPES - GO:0055102 COMMON-NAME - phospholipase inhibitor activity // UNIQUE-ID - GO:0005099 TYPES - GO:0005083 TYPES - GO:0005096 COMMON-NAME - Ras GTPase activator activity // UNIQUE-ID - GO:0008060 TYPES - GO:0005083 TYPES - GO:0005096 COMMON-NAME - ARF GTPase activator activity // UNIQUE-ID - GO:0016005 TYPES - GO:0016004 COMMON-NAME - phospholipase A2 activator activity // UNIQUE-ID - GO:0016505 TYPES - GO:0016504 COMMON-NAME - apoptotic protease activator activity // UNIQUE-ID - GO:0030295 TYPES - GO:0019209 TYPES - GO:0019887 COMMON-NAME - protein kinase activator activity // UNIQUE-ID - GO:0008048 TYPES - GO:0030250 COMMON-NAME - calcium sensitive guanylate cyclase activator activity // UNIQUE-ID - GO:0008603 TYPES - GO:0019887 COMMON-NAME - cAMP-dependent protein kinase regulator activity SYNONYMS - 3',5' cAMP-dependent protein kinase regulator activity SYNONYMS - 3',5'-cAMP-dependent protein kinase regulator activity SYNONYMS - adenosine 3',5'-cyclophosphate-dependent protein kinase regulator activity SYNONYMS - cAMP-dependent protein kinase, intrinsic regulator activity SYNONYMS - cyclic AMP-dependent protein kinase regulator activity // UNIQUE-ID - GO:0008605 TYPES - GO:0019887 COMMON-NAME - protein kinase CK2 regulator activity SYNONYMS - casein kinase II, regulator SYNONYMS - protein kinase CK2, intrinsic regulator activity // UNIQUE-ID - GO:0016538 TYPES - GO:0019887 COMMON-NAME - cyclin-dependent protein kinase regulator activity SYNONYMS - cyclin SYNONYMS - cyclin-dependent protein kinase, intrinsic regulator activity SYNONYMS - G1/S-specific cyclin SYNONYMS - G2/M-specific cyclin // UNIQUE-ID - GO:0046935 TYPES - GO:0035014 COMMON-NAME - 1-phosphatidylinositol-3-kinase regulator activity COMMENT - See also the molecular function term '1-phosphatidylinositol-3-kinase activity ; GO:0016303'. SYNONYMS - phosphatidylinositol 3-kinase regulator activity SYNONYMS - phosphatidylinositol 3-kinase, class I, regulator activity // UNIQUE-ID - GO:0008599 TYPES - GO:0019888 COMMON-NAME - protein phosphatase type 1 regulator activity SYNONYMS - protein phosphatase type 1, intrinsic regulator activity // UNIQUE-ID - GO:0008601 TYPES - GO:0019888 COMMON-NAME - protein phosphatase type 2A regulator activity SYNONYMS - protein phosphatase type 2A, intrinsic regulator activity // UNIQUE-ID - GO:0005086 TYPES - GO:0005083 TYPES - GO:0005085 COMMON-NAME - ARF guanyl-nucleotide exchange factor activity // UNIQUE-ID - GO:0005088 TYPES - GO:0005083 TYPES - GO:0005085 COMMON-NAME - Ras guanyl-nucleotide exchange factor activity // UNIQUE-ID - GO:0016455 TYPES - GO:0016251 COMMON-NAME - RNA polymerase II transcription mediator activity SYNONYMS - thyroid receptor-associated protein SYNONYMS - TRAP protein // UNIQUE-ID - GO:0001565 TYPES - GO:0004872 COMMON-NAME - phorbol ester receptor activity // UNIQUE-ID - GO:0004879 TYPES - GO:0004872 COMMON-NAME - ligand-dependent nuclear receptor activity COMMENT - Note that this term represents a function and not a gene product. Consider also annotating to the molecular function term 'transcription regulator activity ; GO:0030528'. SYNONYMS - nuclear hormone receptor // UNIQUE-ID - GO:0004888 TYPES - GO:0004872 COMMON-NAME - transmembrane receptor activity // UNIQUE-ID - GO:0008095 TYPES - GO:0004872 COMMON-NAME - inositol-1,4,5-triphosphate receptor activity SYNONYMS - IP3 receptor activity // UNIQUE-ID - GO:0008329 TYPES - GO:0004872 COMMON-NAME - pattern recognition receptor activity COMMENT - Note that this term and its child terms are intended for gene products which are directly coupled to a signal transduction pathway; gene products which recognize polymeric structures such as polysaccharides or peptidoglycans in extracellular space, but are not directly coupled to signal transduction pathway, should use the term 'pattern binding ; GO:0001871' or its child terms. Note that many gene products that are called pattern recognition receptors in the literature have a broad range of potential ligands and also can be annotated to 'scavenger receptor activity ; GO:0005044'. SYNONYMS - macrophage receptor activity // UNIQUE-ID - GO:0015026 TYPES - GO:0004872 COMMON-NAME - coreceptor activity // UNIQUE-ID - GO:0030377 TYPES - GO:0004872 COMMON-NAME - U-plasminogen activator receptor activity SYNONYMS - uPAR SYNONYMS - urokinase plasminogen activator receptor // UNIQUE-ID - GO:0005066 TYPES - GO:0005057 COMMON-NAME - transmembrane receptor protein tyrosine kinase signaling protein activity SYNONYMS - transmembrane receptor protein tyrosine kinase signalling protein activity // UNIQUE-ID - GO:0005071 TYPES - GO:0005057 COMMON-NAME - transmembrane receptor protein serine/threonine kinase signaling protein activity SYNONYMS - transmembrane receptor protein serine/threonine kinase signalling protein activity // UNIQUE-ID - GO:0016299 TYPES - GO:0005057 COMMON-NAME - regulator of G-protein signaling activity SYNONYMS - regulator of G protein signaling activity SYNONYMS - regulator of G protein signalling activity SYNONYMS - regulator of G-protein signalling activity SYNONYMS - RGS // UNIQUE-ID - GO:0030545 TYPES - GO:0005057 COMMON-NAME - receptor regulator activity // UNIQUE-ID - GO:0009281 TYPES - GO:0005840 TYPES - GO:0044445 COMMON-NAME - cytosolic ribosome (sensu Bacteria) SYNONYMS - 70S ribosome // UNIQUE-ID - GO:0005634 TYPES - GO:0043231 COMMON-NAME - nucleus // UNIQUE-ID - GO:0005783 TYPES - GO:0044444 TYPES - GO:0043231 COMMON-NAME - endoplasmic reticulum SYNONYMS - ER // UNIQUE-ID - GO:0005794 TYPES - GO:0043231 COMMON-NAME - Golgi apparatus COMMENT - Note that the Golgi apparatus can be located in various places in the cytoplasm. In plants and lower animal cells, the Golgi apparatus exists as many copies of discrete stacks dispersed throughout the cytoplasm, while the Golgi apparatus of interphase mammalian cells is a juxtanuclear, often pericentriolar reticulum, where the discrete Golgi stacks are stitched together to form a compact and interconnected ribbon, sometimes called the Golgi ribbon. SYNONYMS - Golgi complex SYNONYMS - Golgi ribbon // UNIQUE-ID - GO:0042579 TYPES - GO:0044444 TYPES - GO:0043231 COMMON-NAME - microbody // UNIQUE-ID - GO:0005624 TYPES - GO:0005626 COMMON-NAME - membrane fraction COMMENT - Note that this term refers to disrupted cells, and does not necessarily correspond to any specific structure(s) in an intact cell. // UNIQUE-ID - GO:0009274 TYPES - GO:0005618 COMMON-NAME - peptidoglycan-based cell wall SYNONYMS - murein sacculus SYNONYMS - peptidoglycan SYNONYMS - envelope (sensu Bacteria) // UNIQUE-ID - GO:0030113 TYPES - GO:0030112 TYPES - GO:0042603 COMMON-NAME - capsule (sensu Bacteria) // UNIQUE-ID - GO:0005829 TYPES - GO:0044444 COMMON-NAME - cytosol // UNIQUE-ID - GO:0044445 TYPES - GO:0044444 COMMON-NAME - cytosolic part SYNONYMS - cytosol component // UNIQUE-ID - GO:0016021 TYPES - GO:0031224 COMMON-NAME - integral to membrane SYNONYMS - transmembrane // UNIQUE-ID - GO:0031226 TYPES - GO:0031224 TYPES - GO:0044459 COMMON-NAME - intrinsic to plasma membrane // UNIQUE-ID - GO:0006954 TYPES - GO:0006955 TYPES - GO:0009611 TYPES - GO:0009613 COMMON-NAME - inflammatory response // UNIQUE-ID - GO:0006040 TYPES - GO:0005996 COMMON-NAME - amino sugar metabolic process SYNONYMS - amino sugar metabolism // UNIQUE-ID - GO:0019318 TYPES - GO:0005996 COMMON-NAME - hexose metabolic process // UNIQUE-ID - GO:0019321 TYPES - GO:0005996 COMMON-NAME - pentose metabolic process // UNIQUE-ID - GO:0046364 TYPES - GO:0005996 TYPES - GO:0034637 TYPES - GO:0046165 COMMON-NAME - monosaccharide biosynthetic process // UNIQUE-ID - GO:0046365 TYPES - GO:0005996 TYPES - GO:0044275 TYPES - GO:0046164 COMMON-NAME - monosaccharide catabolic process // UNIQUE-ID - GO:0006096 TYPES - GO:0006007 TYPES - GO:0006091 COMMON-NAME - glycolysis // UNIQUE-ID - GO:0006014 TYPES - GO:0019321 TYPES - GO:0046483 COMMON-NAME - D-ribose metabolic process SYNONYMS - D-ribose metabolism // UNIQUE-ID - GO:0008203 TYPES - GO:0016125 COMMON-NAME - cholesterol metabolic process // UNIQUE-ID - GO:0016126 TYPES - GO:0006694 TYPES - GO:0016125 COMMON-NAME - sterol biosynthetic process SYNONYMS - sterol anabolism SYNONYMS - sterol formation SYNONYMS - sterol synthesis // UNIQUE-ID - GO:0006584 TYPES - GO:0006576 TYPES - GO:0018958 COMMON-NAME - catecholamine metabolism // UNIQUE-ID - GO:0009712 TYPES - GO:0018958 TYPES - GO:0034311 COMMON-NAME - catechol metabolic process // UNIQUE-ID - GO:0019400 TYPES - GO:0019751 TYPES - GO:0044262 COMMON-NAME - alditol metabolic process // UNIQUE-ID - GO:0006067 TYPES - GO:0034308 COMMON-NAME - ethanol metabolic process // UNIQUE-ID - GO:0006259 TYPES - GO:0006139 TYPES - GO:0044260 COMMON-NAME - DNA metabolic process // UNIQUE-ID - GO:0006350 TYPES - GO:0006139 TYPES - GO:0034645 COMMON-NAME - transcription // UNIQUE-ID - GO:0009225 TYPES - GO:0006139 COMMON-NAME - nucleotide-sugar metabolic process // UNIQUE-ID - GO:0016070 TYPES - GO:0006139 TYPES - GO:0044260 COMMON-NAME - RNA metabolic process // UNIQUE-ID - GO:0034654 TYPES - GO:0044271 TYPES - GO:0006139 COMMON-NAME - nucleobase, nucleoside, nucleotide and nucleic acid biosynthetic process SYNONYMS - nucleobase, nucleoside, nucleotide and nucleic acid anabolism SYNONYMS - nucleobase, nucleoside, nucleotide and nucleic acid biosynthesis SYNONYMS - nucleobase, nucleoside, nucleotide and nucleic acid formation SYNONYMS - nucleobase, nucleoside, nucleotide and nucleic acid synthesis // UNIQUE-ID - GO:0055086 TYPES - GO:0006139 COMMON-NAME - nucleobase, nucleoside and nucleotide metabolic process // UNIQUE-ID - GO:0006304 TYPES - GO:0043412 TYPES - GO:0006259 COMMON-NAME - DNA modification // UNIQUE-ID - GO:0009226 TYPES - GO:0009225 TYPES - GO:0044249 COMMON-NAME - nucleotide-sugar biosynthetic process // UNIQUE-ID - GO:0009451 TYPES - GO:0016070 TYPES - GO:0043412 COMMON-NAME - RNA modification COMMENT - The term 'RNA editing' (GO:0016547) was merged into 'RNA modification' (GO:0009451) on the basis of statements in the preface of Modification and Editing of RNA (ISBN:1555811337) that there is no clear distinction between modification and editing. // UNIQUE-ID - GO:0032774 TYPES - GO:0044249 TYPES - GO:0016070 COMMON-NAME - RNA biosynthetic process SYNONYMS - RNA anabolism SYNONYMS - RNA biosynthesis SYNONYMS - RNA formation SYNONYMS - RNA synthesis // UNIQUE-ID - GO:0006163 TYPES - GO:0009117 TYPES - GO:0046483 COMMON-NAME - purine nucleotide metabolic process // UNIQUE-ID - GO:0006220 TYPES - GO:0009117 TYPES - GO:0046483 COMMON-NAME - pyrimidine nucleotide metabolic process // UNIQUE-ID - GO:0009165 TYPES - GO:0009117 TYPES - GO:0044249 COMMON-NAME - nucleotide biosynthetic process // UNIQUE-ID - GO:0006769 TYPES - GO:0006767 TYPES - GO:0009820 TYPES - GO:0019362 TYPES - GO:0043603 COMMON-NAME - nicotinamide metabolic process SYNONYMS - niacin metabolism SYNONYMS - vitamin B3 metabolism // UNIQUE-ID - GO:0000255 TYPES - GO:0043603 TYPES - GO:0009308 TYPES - GO:0046483 COMMON-NAME - allantoin metabolic process // UNIQUE-ID - GO:0006022 TYPES - GO:0005976 TYPES - GO:0009308 COMMON-NAME - aminoglycan metabolic process SYNONYMS - aminoglycan metabolism // UNIQUE-ID - GO:0009309 TYPES - GO:0009308 TYPES - GO:0044271 COMMON-NAME - amine biosynthetic process // UNIQUE-ID - GO:0009310 TYPES - GO:0044270 TYPES - GO:0009308 COMMON-NAME - amine catabolic process // UNIQUE-ID - GO:0009448 TYPES - GO:0009308 TYPES - GO:0006575 COMMON-NAME - gamma-aminobutyric acid metabolic process COMMENT - See also the biological process term 'neurotransmitter metabolic process ; GO:0042133'. SYNONYMS - 4-aminobutanoate metabolism SYNONYMS - 4-aminobutyrate metabolism SYNONYMS - GABA metabolism // UNIQUE-ID - GO:0044106 TYPES - GO:0009308 TYPES - GO:0034641 COMMON-NAME - cellular amine metabolic process // UNIQUE-ID - GO:0046451 TYPES - GO:0043648 TYPES - GO:0009308 COMMON-NAME - diaminopimelate metabolic process // UNIQUE-ID - GO:0006520 TYPES - GO:0006519 TYPES - GO:0019752 TYPES - GO:0044106 COMMON-NAME - cellular amino acid metabolic process // UNIQUE-ID - GO:0000096 TYPES - GO:0006790 TYPES - GO:0006520 COMMON-NAME - sulfur amino acid metabolic process SYNONYMS - sulphur amino acid metabolism // UNIQUE-ID - GO:0009072 TYPES - GO:0006725 TYPES - GO:0006520 COMMON-NAME - aromatic amino acid family metabolic process // UNIQUE-ID - GO:0046655 TYPES - GO:0006760 TYPES - GO:0006520 TYPES - GO:0006767 TYPES - GO:0042558 COMMON-NAME - folic acid metabolic process SYNONYMS - folate metabolism SYNONYMS - vitamin B9 metabolism SYNONYMS - vitamin M metabolism // UNIQUE-ID - GO:0006560 TYPES - GO:0009064 TYPES - GO:0046483 COMMON-NAME - proline metabolic process // UNIQUE-ID - GO:0006547 TYPES - GO:0009075 TYPES - GO:0046483 COMMON-NAME - histidine metabolic process // UNIQUE-ID - GO:0006778 TYPES - GO:0033013 TYPES - GO:0051186 COMMON-NAME - porphyrin metabolic process // UNIQUE-ID - GO:0033014 TYPES - GO:0033013 TYPES - GO:0044271 TYPES - GO:0018130 COMMON-NAME - tetrapyrrole biosynthetic process SYNONYMS - tetrapyrrole anabolism SYNONYMS - tetrapyrrole biosynthesis SYNONYMS - tetrapyrrole formation SYNONYMS - tetrapyrrole synthesis // UNIQUE-ID - GO:0009439 TYPES - GO:0006082 TYPES - GO:0034641 COMMON-NAME - cyanate metabolic process // UNIQUE-ID - GO:0043603 TYPES - GO:0034641 COMMON-NAME - cellular amide metabolic process SYNONYMS - amide metabolism // UNIQUE-ID - GO:0044270 TYPES - GO:0044248 TYPES - GO:0034641 COMMON-NAME - cellular nitrogen compound catabolic process // UNIQUE-ID - GO:0044271 TYPES - GO:0044249 TYPES - GO:0034641 COMMON-NAME - cellular nitrogen compound biosynthetic process // UNIQUE-ID - GO:0042559 TYPES - GO:0018130 TYPES - GO:0019438 TYPES - GO:0042558 TYPES - GO:0044271 COMMON-NAME - pteridine and derivative biosynthetic process SYNONYMS - pterin biosynthesis // UNIQUE-ID - GO:0042724 TYPES - GO:0044272 TYPES - GO:0019438 TYPES - GO:0042364 TYPES - GO:0018130 TYPES - GO:0042723 TYPES - GO:0044271 COMMON-NAME - thiamin and derivative biosynthetic process SYNONYMS - thiamine and derivative biosynthesis SYNONYMS - vitamin B1 and derivative biosynthesis // UNIQUE-ID - GO:0042434 TYPES - GO:0042430 COMMON-NAME - indole derivative metabolic process // UNIQUE-ID - GO:0042435 TYPES - GO:0042434 TYPES - GO:0044249 COMMON-NAME - indole derivative biosynthetic process // UNIQUE-ID - GO:0043545 TYPES - GO:0006732 TYPES - GO:0042558 TYPES - GO:0051189 COMMON-NAME - molybdopterin cofactor metabolic process SYNONYMS - Moco metabolic process SYNONYMS - Moco metabolism SYNONYMS - molybdopterin cofactor metabolism // UNIQUE-ID - GO:0046653 TYPES - GO:0006760 TYPES - GO:0042558 COMMON-NAME - tetrahydrofolate metabolic process SYNONYMS - tetrahydrofolate metabolism // UNIQUE-ID - GO:0006772 TYPES - GO:0042723 COMMON-NAME - thiamin metabolic process SYNONYMS - thiamine metabolism SYNONYMS - vitamin B1 metabolism // UNIQUE-ID - GO:0000272 TYPES - GO:0005976 TYPES - GO:0009057 TYPES - GO:0016052 COMMON-NAME - polysaccharide catabolic process // UNIQUE-ID - GO:0006516 TYPES - GO:0009057 TYPES - GO:0009100 COMMON-NAME - glycoprotein catabolic process SYNONYMS - glycoprotein degradation // UNIQUE-ID - GO:0030163 TYPES - GO:0009057 TYPES - GO:0019538 COMMON-NAME - protein catabolic process SYNONYMS - protein degradation // UNIQUE-ID - GO:0043285 TYPES - GO:0009057 TYPES - GO:0043283 COMMON-NAME - biopolymer catabolic process // UNIQUE-ID - GO:0044265 TYPES - GO:0009057 TYPES - GO:0044248 TYPES - GO:0044260 COMMON-NAME - cellular macromolecule catabolic process // UNIQUE-ID - GO:0044275 TYPES - GO:0016052 TYPES - GO:0044262 TYPES - GO:0044265 COMMON-NAME - cellular carbohydrate catabolic process // UNIQUE-ID - GO:0044242 TYPES - GO:0016042 TYPES - GO:0044248 TYPES - GO:0044255 COMMON-NAME - cellular lipid catabolic process SYNONYMS - cellular lipid breakdown SYNONYMS - cellular lipid catabolism SYNONYMS - cellular lipid degradation // UNIQUE-ID - GO:0016054 TYPES - GO:0006082 TYPES - GO:0044248 COMMON-NAME - organic acid catabolic process SYNONYMS - organic acid breakdown SYNONYMS - organic acid degradation // UNIQUE-ID - GO:0019439 TYPES - GO:0006725 TYPES - GO:0044248 COMMON-NAME - aromatic compound catabolic process SYNONYMS - aromatic compound breakdown SYNONYMS - aromatic compound degradation SYNONYMS - aromatic hydrocarbon catabolism // UNIQUE-ID - GO:0019754 TYPES - GO:0006730 TYPES - GO:0044248 COMMON-NAME - one-carbon compound catabolic process SYNONYMS - one carbon compound catabolism SYNONYMS - one-carbon compound breakdown SYNONYMS - one-carbon compound degradation // UNIQUE-ID - GO:0042219 TYPES - GO:0006575 TYPES - GO:0044248 COMMON-NAME - cellular amino acid derivative catabolic process // UNIQUE-ID - GO:0043171 TYPES - GO:0006518 TYPES - GO:0044248 COMMON-NAME - peptide catabolic process SYNONYMS - peptide breakdown SYNONYMS - peptide catabolism SYNONYMS - peptide degradation // UNIQUE-ID - GO:0046185 TYPES - GO:0006081 TYPES - GO:0044248 COMMON-NAME - aldehyde catabolic process SYNONYMS - aldehyde breakdown SYNONYMS - aldehyde degradation // UNIQUE-ID - GO:0046700 TYPES - GO:0044248 TYPES - GO:0046483 COMMON-NAME - heterocycle catabolic process SYNONYMS - heterocycle breakdown SYNONYMS - heterocycle degradation // UNIQUE-ID - GO:0051187 TYPES - GO:0051186 TYPES - GO:0044248 COMMON-NAME - cofactor catabolic process SYNONYMS - cofactor breakdown SYNONYMS - cofactor degradation // UNIQUE-ID - GO:0006694 TYPES - GO:0008202 TYPES - GO:0008610 COMMON-NAME - steroid biosynthetic process SYNONYMS - steroid anabolism SYNONYMS - steroid formation SYNONYMS - steroid synthesis SYNONYMS - steroidogenesis // UNIQUE-ID - GO:0008299 TYPES - GO:0006720 TYPES - GO:0008610 TYPES - GO:0044249 COMMON-NAME - isoprenoid biosynthetic process SYNONYMS - isoprenoid anabolism SYNONYMS - isoprenoid formation SYNONYMS - isoprenoid synthesis SYNONYMS - isoprene biosynthesis // UNIQUE-ID - GO:0008654 TYPES - GO:0006644 TYPES - GO:0008610 TYPES - GO:0044249 COMMON-NAME - phospholipid biosynthetic process // UNIQUE-ID - GO:0009103 TYPES - GO:0008653 TYPES - GO:0033692 TYPES - GO:0008610 COMMON-NAME - lipopolysaccharide biosynthetic process // UNIQUE-ID - GO:0045017 TYPES - GO:0008610 TYPES - GO:0044249 TYPES - GO:0046486 COMMON-NAME - glycerolipid biosynthetic process SYNONYMS - glycerolipid anabolism SYNONYMS - glycerolipid biosynthesis SYNONYMS - glycerolipid formation SYNONYMS - glycerolipid synthesis // UNIQUE-ID - GO:0046467 TYPES - GO:0006643 TYPES - GO:0008610 TYPES - GO:0044249 COMMON-NAME - membrane lipid biosynthetic process // UNIQUE-ID - GO:0000271 TYPES - GO:0005976 TYPES - GO:0009059 TYPES - GO:0016051 COMMON-NAME - polysaccharide biosynthetic process SYNONYMS - glycan biosynthesis // UNIQUE-ID - GO:0034645 TYPES - GO:0044260 TYPES - GO:0044249 TYPES - GO:0009059 COMMON-NAME - cellular macromolecule biosynthetic process // UNIQUE-ID - GO:0042965 TYPES - GO:0009059 COMMON-NAME - glutaredoxin biosynthetic process // UNIQUE-ID - GO:0042966 TYPES - GO:0009059 COMMON-NAME - biotin carboxyl carrier protein biosynthetic process SYNONYMS - BCCP biosynthesis // UNIQUE-ID - GO:0043284 TYPES - GO:0043283 TYPES - GO:0009059 COMMON-NAME - biopolymer biosynthetic process // UNIQUE-ID - GO:0044038 TYPES - GO:0010382 TYPES - GO:0070589 COMMON-NAME - cell wall macromolecule biosynthetic process SYNONYMS - cell wall macromolecule anabolism SYNONYMS - cell wall macromolecule biosynthesis SYNONYMS - cell wall macromolecule synthesis // UNIQUE-ID - GO:0009312 TYPES - GO:0009311 TYPES - GO:0016051 COMMON-NAME - oligosaccharide biosynthetic process // UNIQUE-ID - GO:0034637 TYPES - GO:0016051 TYPES - GO:0044249 TYPES - GO:0044262 COMMON-NAME - cellular carbohydrate biosynthetic process // UNIQUE-ID - GO:0008202 TYPES - GO:0044255 TYPES - GO:0044249 COMMON-NAME - steroid metabolic process // UNIQUE-ID - GO:0009110 TYPES - GO:0006766 TYPES - GO:0044249 COMMON-NAME - vitamin biosynthetic process SYNONYMS - vitamin anabolism SYNONYMS - vitamin formation SYNONYMS - vitamin synthesis // UNIQUE-ID - GO:0016053 TYPES - GO:0044249 TYPES - GO:0006082 COMMON-NAME - organic acid biosynthetic process SYNONYMS - organic acid anabolism SYNONYMS - organic acid formation SYNONYMS - organic acid synthesis // UNIQUE-ID - GO:0018130 TYPES - GO:0046483 TYPES - GO:0044249 COMMON-NAME - heterocycle biosynthetic process SYNONYMS - heterocycle anabolism SYNONYMS - heterocycle formation SYNONYMS - heterocycle synthesis // UNIQUE-ID - GO:0019438 TYPES - GO:0006725 TYPES - GO:0044249 COMMON-NAME - aromatic compound biosynthetic process SYNONYMS - aromatic hydrocarbon biosynthesis // UNIQUE-ID - GO:0042136 TYPES - GO:0042133 TYPES - GO:0044249 COMMON-NAME - neurotransmitter biosynthesis SYNONYMS - neurotransmitter anabolism SYNONYMS - neurotransmitter formation SYNONYMS - neurotransmitter synthesis SYNONYMS - neurotransmitter biosynthesis and storage // UNIQUE-ID - GO:0042398 TYPES - GO:0006575 TYPES - GO:0044249 COMMON-NAME - cellular amino acid derivative biosynthetic process // UNIQUE-ID - GO:0043043 TYPES - GO:0006518 TYPES - GO:0044249 COMMON-NAME - peptide biosynthetic process // UNIQUE-ID - GO:0043094 TYPES - GO:0044249 COMMON-NAME - cellular metabolic compound salvage // UNIQUE-ID - GO:0044272 TYPES - GO:0006790 TYPES - GO:0044249 COMMON-NAME - sulfur compound biosynthetic process SYNONYMS - sulfur compound anabolism SYNONYMS - sulfur compound formation SYNONYMS - sulfur compound synthesis SYNONYMS - sulfur biosynthesis // UNIQUE-ID - GO:0051188 TYPES - GO:0051186 TYPES - GO:0044249 COMMON-NAME - cofactor biosynthetic process // UNIQUE-ID - GO:0006650 TYPES - GO:0006644 TYPES - GO:0046486 COMMON-NAME - glycerophospholipid metabolic process SYNONYMS - phosphoglyceride metabolism // UNIQUE-ID - GO:0046493 TYPES - GO:0006644 TYPES - GO:0006664 COMMON-NAME - lipid A metabolic process // UNIQUE-ID - GO:0044042 TYPES - GO:0005976 COMMON-NAME - glucan metabolic process SYNONYMS - glucan metabolism // UNIQUE-ID - GO:0044264 TYPES - GO:0005976 TYPES - GO:0044260 TYPES - GO:0044262 COMMON-NAME - cellular polysaccharide metabolic process SYNONYMS - cellular glycan metabolism // UNIQUE-ID - GO:0008653 TYPES - GO:0044264 TYPES - GO:0044255 COMMON-NAME - lipopolysaccharide metabolic process // UNIQUE-ID - GO:0044267 TYPES - GO:0019538 TYPES - GO:0044260 COMMON-NAME - cellular protein metabolic process // UNIQUE-ID - GO:0051604 TYPES - GO:0019538 COMMON-NAME - protein maturation // UNIQUE-ID - GO:0006464 TYPES - GO:0043412 TYPES - GO:0044267 COMMON-NAME - protein modification process // UNIQUE-ID - GO:0034960 TYPES - GO:0043283 TYPES - GO:0044260 COMMON-NAME - cellular biopolymer metabolic process SYNONYMS - cellular biopolymer metabolism // UNIQUE-ID - GO:0009100 TYPES - GO:0044260 COMMON-NAME - glycoprotein metabolic process // UNIQUE-ID - GO:0009438 TYPES - GO:0006081 COMMON-NAME - methylglyoxal metabolic process // UNIQUE-ID - GO:0046487 TYPES - GO:0032787 TYPES - GO:0006081 COMMON-NAME - glyoxylate metabolic process // UNIQUE-ID - GO:0006097 TYPES - GO:0046487 TYPES - GO:0044262 COMMON-NAME - glyoxylate cycle SYNONYMS - glyoxylate bypass // UNIQUE-ID - GO:0043436 TYPES - GO:0006082 TYPES - GO:0042180 COMMON-NAME - oxoacid metabolic process SYNONYMS - keto acid metabolic process SYNONYMS - keto acid metabolism SYNONYMS - ketoacid metabolic process SYNONYMS - ketoacid metabolism SYNONYMS - oxo acid metabolic process SYNONYMS - oxo acid metabolism SYNONYMS - oxoacid metabolism // UNIQUE-ID - GO:0000273 TYPES - GO:0019752 TYPES - GO:0006732 TYPES - GO:0046483 TYPES - GO:0006790 COMMON-NAME - lipoic acid metabolic process // UNIQUE-ID - GO:0006631 TYPES - GO:0032787 TYPES - GO:0044255 COMMON-NAME - fatty acid metabolic process // UNIQUE-ID - GO:0006760 TYPES - GO:0006725 TYPES - GO:0006752 TYPES - GO:0032787 TYPES - GO:0046483 COMMON-NAME - folic acid and derivative metabolic process SYNONYMS - folate and derivative metabolism SYNONYMS - vitamin B9 and derivative metabolism SYNONYMS - vitamin M and derivative metabolism // UNIQUE-ID - GO:0015980 TYPES - GO:0006091 COMMON-NAME - energy derivation by oxidation of organic compounds SYNONYMS - chemoorganotrophy // UNIQUE-ID - GO:0006092 TYPES - GO:0015980 TYPES - GO:0044262 COMMON-NAME - main pathways of carbohydrate metabolism // UNIQUE-ID - GO:0006749 TYPES - GO:0006732 TYPES - GO:0006575 TYPES - GO:0006518 TYPES - GO:0006790 COMMON-NAME - glutathione metabolic process SYNONYMS - oxidized glutathione reduction // UNIQUE-ID - GO:0006575 TYPES - GO:0006519 COMMON-NAME - cellular amino acid derivative metabolic process // UNIQUE-ID - GO:0009238 TYPES - GO:0006725 TYPES - GO:0009237 COMMON-NAME - enterobactin metabolic process SYNONYMS - enterochelin metabolism // UNIQUE-ID - GO:0006767 TYPES - GO:0006766 COMMON-NAME - water-soluble vitamin metabolic process // UNIQUE-ID - GO:0042816 TYPES - GO:0006767 TYPES - GO:0046483 COMMON-NAME - vitamin B6 metabolic process // UNIQUE-ID - GO:0042822 TYPES - GO:0042816 TYPES - GO:0051186 COMMON-NAME - pyridoxal phosphate metabolic process SYNONYMS - active vitamin B6 metabolism // UNIQUE-ID - GO:0006743 TYPES - GO:0042180 TYPES - GO:0042375 TYPES - GO:0006733 COMMON-NAME - ubiquinone metabolic process SYNONYMS - coenzyme Q metabolism // UNIQUE-ID - GO:0006643 TYPES - GO:0044255 COMMON-NAME - membrane lipid metabolic process // UNIQUE-ID - GO:0006720 TYPES - GO:0044255 COMMON-NAME - isoprenoid metabolic process SYNONYMS - isoprene metabolism // UNIQUE-ID - GO:0030258 TYPES - GO:0044255 COMMON-NAME - lipid modification // UNIQUE-ID - GO:0046486 TYPES - GO:0044255 COMMON-NAME - glycerolipid metabolic process SYNONYMS - glycerolipid metabolism // UNIQUE-ID - GO:0009255 TYPES - GO:0044262 COMMON-NAME - Entner-Doudoroff pathway // UNIQUE-ID - GO:0006732 TYPES - GO:0051186 COMMON-NAME - coenzyme metabolic process // UNIQUE-ID - GO:0009237 TYPES - GO:0051186 COMMON-NAME - siderophore metabolic process SYNONYMS - siderochrome metabolism // UNIQUE-ID - GO:0042375 TYPES - GO:0051186 COMMON-NAME - quinone cofactor metabolic process // UNIQUE-ID - GO:0051189 TYPES - GO:0051186 COMMON-NAME - prosthetic group metabolic process SYNONYMS - prosthetic group metabolism // UNIQUE-ID - GO:0009311 TYPES - GO:0005975 COMMON-NAME - oligosaccharide metabolic process // UNIQUE-ID - GO:0009401 TYPES - GO:0007165 TYPES - GO:0008643 COMMON-NAME - phosphoenolpyruvate-dependent sugar phosphotransferase system SYNONYMS - PTS system // UNIQUE-ID - GO:0019226 TYPES - GO:0007267 COMMON-NAME - transmission of nerve impulse // UNIQUE-ID - GO:0009432 TYPES - GO:0031668 TYPES - GO:0033554 COMMON-NAME - SOS response // UNIQUE-ID - GO:0043623 TYPES - GO:0006461 TYPES - GO:0034622 COMMON-NAME - cellular protein complex assembly // UNIQUE-ID - GO:0034984 TYPES - GO:0006974 TYPES - GO:0033554 COMMON-NAME - cellular response to DNA damage stimulus SYNONYMS - cellular DNA damage response // UNIQUE-ID - GO:0031504 TYPES - GO:0007047 COMMON-NAME - peptidoglycan-based cell wall organization SYNONYMS - cell wall organisation and biogenesis (sensu Bacteria) // UNIQUE-ID - GO:0006461 TYPES - GO:0065003 COMMON-NAME - protein complex assembly SYNONYMS - chaperone activity SYNONYMS - tubulin-specific chaperone activity // UNIQUE-ID - GO:0001501 TYPES - GO:0048513 COMMON-NAME - skeletal development // UNIQUE-ID - GO:0009269 TYPES - GO:0009414 COMMON-NAME - response to desiccation // UNIQUE-ID - GO:0031667 TYPES - GO:0009991 COMMON-NAME - response to nutrient levels // UNIQUE-ID - GO:0006812 TYPES - GO:0006811 COMMON-NAME - cation transport // UNIQUE-ID - GO:0006820 TYPES - GO:0006811 COMMON-NAME - anion transport // UNIQUE-ID - GO:0009889 TYPES - GO:0019222 COMMON-NAME - regulation of biosynthetic process SYNONYMS - regulation of anabolism SYNONYMS - regulation of formation SYNONYMS - regulation of synthesis // UNIQUE-ID - GO:0031323 TYPES - GO:0019222 TYPES - GO:0050794 COMMON-NAME - regulation of cellular metabolic process // UNIQUE-ID - GO:0051171 TYPES - GO:0019222 COMMON-NAME - regulation of nitrogen compound metabolic process SYNONYMS - regulation of nitrogen metabolic process SYNONYMS - regulation of nitrogen metabolism // UNIQUE-ID - GO:0060255 TYPES - GO:0019222 COMMON-NAME - regulation of macromolecule metabolic process // UNIQUE-ID - GO:0080090 TYPES - GO:0019222 COMMON-NAME - regulation of primary metabolic process // UNIQUE-ID - GO:0051244 TYPES - GO:0050791 TYPES - GO:0050794 COMMON-NAME - regulation of cellular physiological process // UNIQUE-ID - ALANINE-SYN TYPES - IND-AMINO-ACID-SYN COMMON-NAME - Alanine Biosynthesis COMMENT - This class contains pathways of the biosynthesis of L-alanine de novo (from intermediates of central metabolism) and from other amino acids or their biosynthetic intermediates; L-alanine is a constituent of protein and peptidoglycan. It is a source of D-alanine, which is also a constituent of peptidoglycan. // UNIQUE-ID - ARGININE-SYN TYPES - IND-AMINO-ACID-SYN COMMON-NAME - Arginine Biosynthesis COMMENT - This class contains pathways of the various routes by which the amino acid, arginine, can be synthesized. Arginine is a constituent of proteins; it and its metabolic precursor, ornithine, are precursors of polyamines. // UNIQUE-ID - ASPARAGINE-SYN TYPES - IND-AMINO-ACID-SYN COMMON-NAME - Asparagine Biosynthesis COMMENT - This class contains pathways of the biosynthesis of the amino acid, asparagine, which is a constituent of protein and a donor of amino groups. // UNIQUE-ID - ASPARTATE-SYN TYPES - IND-AMINO-ACID-SYN COMMON-NAME - Aspartate Biosynthesis COMMENT - This class contains pathways of biosynthesis of the amino acid, aspartate, which is a constituent of proteins and an intermediate in various other biosyntheses. // UNIQUE-ID - Beta-Alanine-Biosynthesis TYPES - IND-AMINO-ACID-SYN COMMON-NAME - β Alanine Biosynthesis // UNIQUE-ID - CYSTEINE-SYN TYPES - IND-AMINO-ACID-SYN COMMON-NAME - Cysteine Biosynthesis COMMENT - This class contains pathways of synthesis by various organisms of the amino acid, cysteine. Cysteine is a component of protein; it also participates in a number of biosyntheses and metabolic conversions. // UNIQUE-ID - GLUTAMATE-SYN TYPES - IND-AMINO-ACID-SYN COMMON-NAME - Glutamate Biosynthesis COMMENT - This class contains pathways through which the amino acid, glutamate, is synthesized by various organisms under various conditions of growth. Glutamate in a constituent of proteins; it is also an important donor of amino groups to biosynthetic pathways and it acts as a pH buffer for the cytosol. // UNIQUE-ID - GLUTAMINE-SYN TYPES - IND-AMINO-ACID-SYN COMMON-NAME - Glutamine Biosynthesis COMMENT - This class contains pathways by which the amino acid, glutamine, is synthesized by various organisms under various conditions of growth. Glutamine is a constituent of proteins; it is also an important amino and amido groups donor for many biosyntheses. // UNIQUE-ID - GLYCINE-SYN TYPES - IND-AMINO-ACID-SYN COMMON-NAME - Glycine Biosynthesis COMMENT - This class contains pathways by which the amino acid, glycine, can be synthesized. Glycine is a constituent of proteins and it enters into pathways of synthesis of other metabolites. // UNIQUE-ID - HISTIDINE-SYN TYPES - IND-AMINO-ACID-SYN COMMON-NAME - Histidine Biosynthesis COMMENT - This class contains pathways by which various organisms synthesize the amino acid, histidine. Histidine is a constituent of proteins. // UNIQUE-ID - ISOLEUCINE-SYN TYPES - IND-AMINO-ACID-SYN COMMON-NAME - Isoleucine Biosynthesis // UNIQUE-ID - LEUCINE-SYN TYPES - IND-AMINO-ACID-SYN COMMON-NAME - Leucine Biosynthesis // UNIQUE-ID - LYSINE-SYN TYPES - IND-AMINO-ACID-SYN COMMON-NAME - Lysine Biosynthesis COMMENT - This class contains pathways by which various organisms synthesize the amino acid, lysine. The bacterial pathways produce as in intermediate meso-diaminopimelate, which enters into the synthesis of peptidoglycan. Lysine is a constituent of proteins. It also enters into various biosynthesis pathways. // UNIQUE-ID - METHIONINE-SYN TYPES - IND-AMINO-ACID-SYN COMMON-NAME - Methionine Biosynthesis COMMENT - This class contains pathways by which various organisms synthesize the amino acid, methionine. Methionine is a constituent of proteins; it is also a methyl-group donor to various pathways of biosynthesis. // UNIQUE-ID - Other-Amino-Acid-Biosynthesis TYPES - IND-AMINO-ACID-SYN COMMON-NAME - Other Amino Acid Biosynthesis // UNIQUE-ID - PHENYLALANINE-SYN TYPES - IND-AMINO-ACID-SYN COMMON-NAME - Phenylalanine Biosynthesis COMMENT - This class contains the slightly differing pathways by which various organisms synthesize the amino acid phenylalanine which is a constituent of proteins. Phenylalanine also is a starting point for the synthesis of phenylpropanoids. // UNIQUE-ID - PROLINE-SYN TYPES - IND-AMINO-ACID-SYN COMMON-NAME - Proline Biosynthesis COMMENT - This class contains pathways of synthesis of the amino acid, L-proline, from precursor metabolites, other amino acids and from D-proline. L-proline is a constituent of proteins and it is as an osmotic protectant. // UNIQUE-ID - Selenocysteine-Biosynthesis TYPES - IND-AMINO-ACID-SYN COMMON-NAME - Selenocysteine Biosynthesis COMMENT - This class holds pathways for the biosynthesis of the amino acid selenocysteine. // UNIQUE-ID - SERINE-BIOSYNTHESIS TYPES - IND-AMINO-ACID-SYN COMMON-NAME - Serine Biosynthesis // UNIQUE-ID - THREONINE-BIOSYNTHESIS TYPES - IND-AMINO-ACID-SYN COMMON-NAME - Threonine Biosynthesis COMMENT - This class contains pathways of biosynthesis of the amino acid, threonine, and its precursor, homoserine, from various metabolic intermediates. Threonine is a constituent of proteins and a precursor of coenzyme B as well as the amino acid, isoleucine. // UNIQUE-ID - TRYPTOPHAN-BIOSYNTHESIS TYPES - IND-AMINO-ACID-SYN COMMON-NAME - Tryptophan Biosynthesis // UNIQUE-ID - TYROSINE-SYN TYPES - IND-AMINO-ACID-SYN COMMON-NAME - Tyrosine Biosynthesis COMMENT - This class contains pathways by which various organisms synthesize the amino acid, tyrosine. Tyrosine is a constituent of proteins. It also enters into the synthesis of the cyanogenic glycoside, dhurrin, found in certain plants and the vitamin, thiamine. // UNIQUE-ID - VALINE-BIOSYNTHESIS TYPES - IND-AMINO-ACID-SYN COMMON-NAME - Valine Biosynthesis // UNIQUE-ID - Gluconeogenesis TYPES - CARBO-BIOSYNTHESIS COMMON-NAME - Gluconeogenesis COMMENT - This class hold gluconeogenesis pathways // UNIQUE-ID - Sugar-Alcohols-Biosynthesis TYPES - CARBO-BIOSYNTHESIS COMMON-NAME - Sugar Alcohols Biosynthesis COMMENT - This class holds pathways for the biosythesis of sugar alcohols // UNIQUE-ID - SUGAR-NUCLEOTIDES TYPES - CARBO-BIOSYNTHESIS COMMON-NAME - Sugar Nucleotides Biosynthesis // UNIQUE-ID - Trehalose-biosynthesis TYPES - CARBO-BIOSYNTHESIS COMMON-NAME - Trehalose biosynthesis // UNIQUE-ID - CMP-KDO-Biosynthesis TYPES - Polysaccharides-Biosynthesis COMMON-NAME - CMP-KDO biosynthesis COMMENT - This class holds pathways for the biosynthesis of CMP-KDO. // UNIQUE-ID - GLYCOGEN-BIOSYN TYPES - Polysaccharides-Biosynthesis COMMON-NAME - Glucogen and starch biosynthesis // UNIQUE-ID - Peptidoglycan-Biosynthesis TYPES - Cell-Wall-Biosynthesis COMMON-NAME - Peptidoglycan Biosynthesis COMMENT - This class holds pathways for the biosynthesis of peptidoglycan. // UNIQUE-ID - EPIDERMAL-STRUCTURE TYPES - PLANT-CELL-STRUCTURE COMMON-NAME - Epidermal structures COMMENT - This class contains pathways of synthesis of various materials located on the surface of plant leaves. These materials play a protective role. // UNIQUE-ID - PRIMARY-CELL-WALL TYPES - PLANT-CELL-STRUCTURE COMMON-NAME - Primary cell wall COMMENT - This class contains pathways of biosynthesis of components of the plant cell wall. // UNIQUE-ID - SECONDARY-CELL-WALL TYPES - PLANT-CELL-STRUCTURE COMMON-NAME - Secondary cell wall COMMENT - (See Primary cell wall, above.) // UNIQUE-ID - Dephospho-CoA-Biosynthesis TYPES - CoA-Biosynthesis COMMON-NAME - 2'-(5''-phosphoribosyl)-3'-dephospho-CoA Biosynthesis COMMENT - This class holds pathways for biosynthesis of the cofactor bla // UNIQUE-ID - NAD-SYN TYPES - NAD-Metabolism COMMON-NAME - NAD Biosynthesis COMMENT - This class contains pathways by which various organisms synthesize the coenzymes, NAD and NADP that participate principally in dehydrogenase reactions. It also contains the salvage reaction that some organisms employ to utilize environmental sources of precursors of NAD and to recover NAD fragments that are byproducts of reactions in which NAD participates, for example DNA ligase. // UNIQUE-ID - GGPP-Biosynthesis TYPES - Polyprenyl-Biosynthesis COMMON-NAME - Geranylgeranyldiphosphate Biosynthesis COMMENT - This class holds pathways for the biosynthesis of geranylgeranyldiphosphate (GGPP) // UNIQUE-ID - Chlorophyll-Biosynthesis TYPES - Porphyrin-Compounds-Biosynthesis COMMON-NAME - Chlorophyll Biosynthesis COMMENT - This class holds pathways for the biosynthesis of chlorophyll and its precursors. Chlorophylls are prosthetic groups composed of a chlorin ring with an inserted magnesium atom. // UNIQUE-ID - HEME-SYN TYPES - Porphyrin-Compounds-Biosynthesis COMMON-NAME - Heme Biosynthesis COMMENT - This class contains pathways by which various heme groups are synthesized. Hemes are prosthetic groups composed of porphyrin rings that contain an iron atom. // UNIQUE-ID - Demethylmenaquinone-Biosynthesis TYPES - Quinone-Biosynthesis COMMON-NAME - Demethylmenaquinone Biosynthesis COMMENT - This class holds pathways for the biosynthesis of demethylmenaquinones // UNIQUE-ID - DHNA-Biosynthesis TYPES - Quinone-Biosynthesis COMMON-NAME - 1,4-dihydroxy-2-naphthoate biosynthesis COMMENT - This class holds pathways for the biosynthesis of 1,4-dihydroxy-2-naphthoate. // UNIQUE-ID - Menaquinone-Biosynthesis TYPES - Quinone-Biosynthesis COMMON-NAME - Menaquinone Biosynthesis COMMENT - This class holds pathways for the biosynthesis of menaquinones // UNIQUE-ID - Phylloquinone-Biosynthesis TYPES - Quinone-Biosynthesis COMMON-NAME - Phylloquinone Biosynthesis COMMENT - This class holds pathways for the biosynthesis of phyloquinone // UNIQUE-ID - Plastoquinone-Biosynthesis TYPES - Quinone-Biosynthesis COMMON-NAME - Plastoquinone Biosynthesis COMMENT - This class holds pathways for the biosynthesis of plastoquinone // UNIQUE-ID - Rhodoquinone-Biosynthesis TYPES - Quinone-Biosynthesis COMMON-NAME - Rhodoquinone Biosynthesis COMMENT - This class holds pathways for the biosynthesis of the quinone rhodoquinone // UNIQUE-ID - Ubiquinone-Biosynthesis TYPES - Quinone-Biosynthesis COMMON-NAME - Ubiquinone Biosynthesis COMMENT - This class holds pathways for the biosynthesis of the common electron carrier ubiquinone // UNIQUE-ID - Ascorbate-Biosynthesis TYPES - Vitamin-Biosynthesis COMMON-NAME - Ascorbate Biosynthesis COMMENT - This class contains pathways for the biosynthesis of ascorbate (ascorbic acid, vitamin C) /from sugar precursors. // UNIQUE-ID - BIOTIN-SYN TYPES - Vitamin-Biosynthesis COMMON-NAME - Biotin COMMENT - This class contains slightly differing pathways by which various organisms synthesize the vitamin, biotin, which is required as a cofactor for various enzymatic reactions, including carboxylations. // UNIQUE-ID - Cobalamin-Biosynthesis TYPES - Vitamin-Biosynthesis COMMON-NAME - Cobalamin Biosynthesis COMMENT - This class holds pathways for the biosynthesis of cobalamin, adenosylcobalamin, and the various intermediates that are used during the synthesis of these compounds // UNIQUE-ID - Flavin-Biosynthesis TYPES - Vitamin-Biosynthesis COMMON-NAME - Flavin Biosynthesis COMMENT - This class holds pathways for the biosynthesis of flavin // UNIQUE-ID - Folate-Biosynthesis TYPES - Vitamin-Biosynthesis COMMON-NAME - Folate Biosynthesis // UNIQUE-ID - Pantothenate-Biosynthesis TYPES - Vitamin-Biosynthesis COMMON-NAME - Pantothenate Biosynthesis // UNIQUE-ID - Thiamine-Biosynthesis TYPES - Vitamin-Biosynthesis COMMON-NAME - Thiamine Biosynthesis // UNIQUE-ID - Vitamin-B6-Biosynthesis TYPES - Vitamin-Biosynthesis COMMON-NAME - Vitamin B6 Biosynthesis COMMENT - This class holds pathways for the biosynthesis of pyridoxine (vitamin B6 // UNIQUE-ID - Abscisic-Acid-Biosynthesis TYPES - SESQUITERPENOID-SYN TYPES - Plant-Hormone-Biosynthesis COMMON-NAME - Abscisic Acid Biosynthesis // UNIQUE-ID - Auxin-Biosynthesis TYPES - Plant-Hormone-Biosynthesis COMMON-NAME - Auxins Biosynthesis COMMENT - This class contains pathways of the biosynthesis of auxins, which are commonly found in plants, and promote or inhibit cell growth. Auxins are involved in phototropism, gravitropism, apical dominance and leaf abscission. // UNIQUE-ID - Brassinosteroid-Biosynthesis TYPES - Plant-Hormone-Biosynthesis COMMON-NAME - Brassinosteroids Biosynthesis COMMENT - This class contains pathways of biosynthesis of brassinosteroids, which are plant hormones that trigger cell elongation. // UNIQUE-ID - CYTOKININ-BIOSYNTHESIS TYPES - Plant-Hormone-Biosynthesis COMMON-NAME - Cytokinins Biosynthesis COMMENT - This class contains pathways of the biosynthesis of cytokinins, which are prenylated adenine derivatives promoting cell division and delay senescence. // UNIQUE-ID - GIBBERELLIN-SYN TYPES - DITERPENOID-SYN TYPES - Plant-Hormone-Biosynthesis COMMON-NAME - Gibberellins Biosynthesis COMMENT - This class contains pathways of synthesis of the plant growth regulators, the gibberellins. // UNIQUE-ID - Jasmonates-Biosynthesis TYPES - Plant-Hormone-Biosynthesis COMMON-NAME - Jasmonates Biosynthesis // UNIQUE-ID - Gamma-linolenate-Biosynthesis TYPES - Fatty-acid-biosynthesis COMMON-NAME - γ-linolenate Biosynthesis COMMENT - This class holds pathways for the biosynthesis of γ-linolenate // UNIQUE-ID - Linoleate-Biosynthesis TYPES - Fatty-acid-biosynthesis COMMON-NAME - Linoleate Biosynthesis COMMENT - This class holds pathways for the biosynthesis of linoleate // UNIQUE-ID - Oleate-Biosynthesis TYPES - Fatty-acid-biosynthesis COMMON-NAME - Oleate Biosynthesis COMMENT - This class holds pathways for the biosynthesis of oleate // UNIQUE-ID - Palmitate-Biosynthesis TYPES - Fatty-acid-biosynthesis COMMON-NAME - Palmitate Biosynthesis COMMENT - This class holds pathways for the biosynthesis of palmitate // UNIQUE-ID - Palmitoleate-Biosynthesis TYPES - Fatty-acid-biosynthesis COMMON-NAME - Palmitoleate Biosynthesis COMMENT - This class holds pathways for the biosynthesis of the unsaturated fatty acid palmitoleate // UNIQUE-ID - Stearate-Biosynthesis TYPES - Fatty-acid-biosynthesis COMMON-NAME - Stearate Biosynthesis COMMENT - This class holds pathways for the biosynthesis of stearate // UNIQUE-ID - Unusual-fatty-acid-biosynthesis TYPES - Fatty-acid-biosynthesis COMMON-NAME - Unusual Fatty Acid Biosynthesis // UNIQUE-ID - Cardiolipin-Biosynthesis TYPES - Phospholipid-Biosynthesis COMMON-NAME - Cardiolipin Biosynthesis COMMENT - This class holds pathways for the biosynthesis of cardiolipin // UNIQUE-ID - CDP-diacylglycerol-Biosynthesis TYPES - Phospholipid-Biosynthesis COMMON-NAME - CDP-diacylglycerol Biosynthesis COMMENT - This class holds pathways for the biosynthesis of CDP-diacylglycerol. // UNIQUE-ID - PhosphatidylcholineBiosynthesis TYPES - Phospholipid-Biosynthesis // UNIQUE-ID - PhosphatidylethanolamineBiosynthesis TYPES - Phospholipid-Biosynthesis // UNIQUE-ID - PhosphatidylglycerolBiosynthesis TYPES - Phospholipid-Biosynthesis // UNIQUE-ID - IMP-Biosynthesis TYPES - PUR-NUC-SYN COMMON-NAME - Inosine-5'-phosphate Biosynthesis COMMENT - This class holds pathways for the biosynthesis of inosine-5'-phosphate // UNIQUE-ID - Purine-Nucleotide-De-Novo-Biosynthesis TYPES - PUR-NUC-SYN COMMON-NAME - Purine Nucleotide de novo Biosynthesis COMMENT - This class holds pathway for the de novo biosynthesis of purine nucleotides // UNIQUE-ID - Purine-Nucleotides-Salvage TYPES - PUR-NUC-SYN COMMON-NAME - Purine Nucleotide Salvage COMMENT - This class holds pathways for the salvage of purine nucleotides // UNIQUE-ID - ANTHOCYANIN-SYN TYPES - FLAVONOID-SYN COMMON-NAME - Anthocyanins Biosynthesis COMMENT - This class contains pathways of biosynthesis of anthocyanins, which are water soluble, mostly glucosylated pigments in fruits, leaves and flowers responsible for displaying red to blue colors. Anthocyanins are powerful antioxidants and involved in UV-B protection and inter-species interactions. // UNIQUE-ID - AURONE-SYN TYPES - FLAVONOID-SYN COMMON-NAME - Aurones Biosynthesis COMMENT - This class contains pathways of biosynthesis of aurones, which are a class of plant flavonoids with the basic skeletal structure of two benzene rings joined by a linear C3 chain (C6-C3-C6). Aurones confer yellow color to flowers and exist mostly as 6-O-glucosides. // UNIQUE-ID - CHALCONE-SYN TYPES - FLAVONOID-SYN COMMON-NAME - Chalcones Biosynthesis COMMENT - This class contains pathways of biosynthesis of chalcones, which are key intermediates in the formation of major flavonoid classes. Chalcones are the first to possess the typical monohydroxylated B ring, typical of all flavonoids. Chalcones are important biological compounds involved e.g. in pigment biosynthesis but also acting as antifungal and antibacterial agents. // UNIQUE-ID - FLAVANONES-SYN TYPES - FLAVONOID-SYN COMMON-NAME - Flavanones Biosynthesis COMMENT - Flavanones such as naringenin and eriodictyol are important intermediates and branch point compounds in the flavonoid biosynthesis and often occur in plants as glycosides. Flavanones are involved in crucial aspects of plants such as defence against pathogens and have been valued for their broad pharmaceutical properties. // UNIQUE-ID - FLAVONE-SYN TYPES - FLAVONOID-SYN COMMON-NAME - Flavones Biosynthesis COMMENT - This class contains pathways of biosynthesis of flavones (e.g. apigenin), which represent compounds arised by oxidative processes from flavanones such as naringenin. Many of the flavones occur as glucosides and are involved e.g. in pigmentation (pollinator attraction) and protection against UV-B light. // UNIQUE-ID - FLAVONOL-SYN TYPES - FLAVONOID-SYN COMMON-NAME - Flavonols Biosynthesis COMMENT - This class contains pathways of biosynthesis of flavonols (e.g. quercetin), which are compounds arised through consecutive oxidative processes from the flavonoid intermediates flavanones and dihydroflavonols. Flavonols are the most widespread of the flavonoids and have a wide array of physiological activities, e.g. stress protection // UNIQUE-ID - ISOFLAVONOID-SYN TYPES - FLAVONOID-SYN COMMON-NAME - Isoflavonoids Biosynthesis COMMENT - This class contains pathways of biosynthesis of isoflavonoids, which are phenolic compounds characterized by a unique 2,3-aryl migration on the B ring. The isoflavonoids are mostly restricted to the legume family. Isoflavonoids are involved in many aspects of plant-plant and plant-environment interactions and exhibit e.g. estrogenic activities. // UNIQUE-ID - LEUCOANTHOCYANIDIN-SYN TYPES - FLAVONOID-SYN COMMON-NAME - Leucoanthocyanidins (flavan-3,4-diols) Biosynthesis COMMENT - This class contains pathways of leucoanthocyanidins, which are a colorless intermediates in the biosynthetic route to the colored end products of the flavonoid pathway. Leucoanthocyanidins mark the branching point between the monomeric anthocyanins and the polymeric proanthocyanidins. // UNIQUE-ID - PHLOBAPHENE-SYN TYPES - FLAVONOID-SYN COMMON-NAME - Phlobaphenes Biosynthesis COMMENT - This class contains pathways of biosynthesis of phlobaphene, which are red pigments with oligomeric or polymeric structure derived from the flavonoid intermediate flavan-4-ols. // UNIQUE-ID - PRENYLFLAVONOID-SYN TYPES - FLAVONOID-SYN COMMON-NAME - Prenylflavonoids Biosynthesis SYNONYMS - Prenylated flavonoids // UNIQUE-ID - PROANTHOCYANIDIN-SYN TYPES - FLAVONOID-SYN COMMON-NAME - Proanthocyanidins Biosynthesis COMMENT - This class contains pathways of biosynthesis of proanthocyanidins (condensed tannins), which are oligomeric and polymeric end products of the flavonoid biosynthetic pathway derived from flavan-3-ols. Proanthocyanidins exhibit strong interactions with proteins, provide protection against predation and are particularly important to ruminant livestock. // UNIQUE-ID - ALKALOIDS-SYN TYPES - N-CONTAINING-SECONDARY-CMPD-SYN COMMON-NAME - Alkaloids Biosynthesis COMMENT - This class contains biosynthetic pathways of alkaloids. Most alkaloids contain cyclic nitrogen. They function as defense compounds. Many alkaloids, including morphine and cocaine, have a high affinity for receptors of neurotransmitters and have pharmacological activities. // UNIQUE-ID - AMINE-SYN TYPES - N-CONTAINING-SECONDARY-CMPD-SYN COMMON-NAME - Amines Biosynthesis COMMENT - This class contains pathways of the biosynthesis of amines that are widely found in plants and can occur as independent products involved in a variety of functions (attractant, defense compound, antibacterial, antifungal), or as intermediates in the biosynthesis of alkaloids. // UNIQUE-ID - N-CONTAINING-GLUCOSIDE-SYN TYPES - N-CONTAINING-SECONDARY-CMPD-SYN COMMON-NAME - Nitrogen-Containing Glucosides Biosynthesis COMMENT - This class contains biosynthetic pathways of nitrogen containing glycosides, mainly cyanogenic glycosides and glucosinolates. These compounds occur as glycosides and function as defense compounds. They are activated after the removal of the glucose moiety by the action of a beta-glucosidase. // UNIQUE-ID - NON-PROTEIN-AMINO-ACID-SYN TYPES - N-CONTAINING-SECONDARY-CMPD-SYN COMMON-NAME - Non protein Amino Acids Biosynthesis COMMENT - This class contains pathways of the biosynthesis of compounds which carry a carboxyl and an amino or imino group, and have therefore been classified as amino acids, but do not enter in the composition of proteins. // UNIQUE-ID - TERPENOID-ALKALOIDS TYPES - ALKALOIDS-SYN TYPES - Terpenoid-Biosynthesis COMMON-NAME - Terpenoid Alkaloids Biosynthesis COMMENT - Terpenoid alkaloids comprise a large number of compounds biosynthetically derived from pathways that lead to the various groups of terpenes such as monoterpenoids, sesquiterpenoids, diterpenoids and steroids. Terpenoid alkaloids are non-uniformly distributed in the plant kingdom. Monoterpenoid alkaloids such as gentianine are often found in the plant family Gentianaceae, sesquiterpenoids such as dendrobine occur largely in Orchidaceae or cassinine in the Celastraceae, diterpenoids such as aconitine are located in the family Ranunculaceae and steroidal alkaloids, for instance buxamine in unrelated plant families such as Buxaceae, protoverine in the Liliacea and solanidine in the Solanaceae. There are a number of terpenoid alkaloids exhibiting antifeedant and antifungal properties. The most interesting alkaloids of this subclass are found in the genus Veratrum being used for treating hypertension, neuralgia and rheumatism. // UNIQUE-ID - BENZENOID-SYN TYPES - PHENYLPROPANOID-SYN COMMON-NAME - Benzenoids Biosynthesis COMMENT - This class contains pathways of biosynthesis of benzoic acid and their derivatives characterized by a C6-C1 skeleton. Benzenoids are involved in many biological activities such as plant-plant interactions and defensive mechanisms. // UNIQUE-ID - CINNAMATE-SYN TYPES - PHENYLPROPANOID-SYN COMMON-NAME - Cinnamates Biosynthesis COMMENT - This class contains pathways of biosynthesis of cinnamic acid and their derivatives characterized by the phenylpropane skeleton C6-C3. Cinnamates are involved e.g. in ecological plant-environment interactions and are precursors to more complex phenylpropanoids such as flavonoids, isoflavonoids and stilbenes. // UNIQUE-ID - COUMARIN-SYN TYPES - PHENYLPROPANOID-SYN COMMON-NAME - Coumarins Biosynthesis COMMENT - This class contains pathways of biosynthesis of coumarins (1,2-benzopyrone and derivatives thereof) derived by lactone formation on ortho-hydroxy cinnamic acid. Coumarins are found as simple and complex (prenylated) compounds in most plant parts and occur mostly as glucosides. // UNIQUE-ID - LIGNAN-SYN TYPES - PHENYLPROPANOID-SYN COMMON-NAME - Lignans Biosynthesis COMMENT - This class contains pathways of biosynthesis of lignans, which are mostly dimeric phenylpropanoid compounds linked through 8-8' bonds (C6-C3)2. However, oligomere lignans and lignans with other linkage types are also known. Lignans possess a variety of biological activities and can act as e.g. allelopathic compounds and antioxidants. // UNIQUE-ID - LIGNIN-SYN TYPES - PHENYLPROPANOID-SYN COMMON-NAME - Lignins Biosynthesis COMMENT - This class contains pathways of biosynthesis of lignins, which are biopolymers characterized by a (C6-C3)n skeleton. Lignin is the polymeric product derived from the dehydrogenative polymerization of three monolignol precursors: coniferyl alcohol, sinapyl alcohol and p-coumaryl alcohol. Lignin is one of the most abundant organic materials on earth (it is only second to cellulose) and provides strength and protection against pathogenic attacks to plants. // UNIQUE-ID - QUINONE-SYN TYPES - PHENYLPROPANOID-SYN COMMON-NAME - Quinones Biosynthesis COMMENT - This class contains pathways of biosynthesis of quinones, which are compounds arised by different biosynthetic routes such as the polyketide pathway, the shikimic acid pathway and by oxidation of other secondary metabolites. Quinones are involved in both primary and secondary metabolism, the quinones of the latter participating in plant-plant interactions, allelopathy and antimicrobial and algicidal activities. // UNIQUE-ID - STILBENE-SYN TYPES - PHENYLPROPANOID-SYN COMMON-NAME - Stilbenes Biosynthesis COMMENT - This class contains pathways of biosynthesis of stilbenes, which represent compounds (C6-C2-C6) derived from mixed biosynthetic derivation, polyketides (malonyl CoA) and phenylpropanoids (coumaryl CoA). Stilbenes are involved in the protection of wood decay and are induced as phytoalexins in response to pathogenic attacks. // UNIQUE-ID - TANNIN-SYN TYPES - PHENYLPROPANOID-SYN COMMON-NAME - Hydrolyzable Tannins Biosynthesis COMMENT - This class contains pathways of biosynthesis of tannins, which are complex esters of gallic acid (or ellagic acid) with a carbohydrate (usually glucose). Tannins precipitate proteins and are composed of a very diverse group of oligomers and polymers. The tannins are commonly divided into hydrolysable and condensed tannins (proanthocyanidins), with hydrolysable tannins deriving from dehydroshikimic acid and condensed tannins deriving from flavonoid precursors. // UNIQUE-ID - COUMARIN-PHYTOALEXINS TYPES - PHYTOALEXIN-SYN COMMON-NAME - Coumarin Phytoalexins Biosynthesis COMMENT - This class contains pathways of biosynthesis of phytoalexins, which contain the structure of coumarins derived from the cyclization of ortho-coumaric acid synthesized upon infection with pathogenic microorganisms. // UNIQUE-ID - FLAVONOID-PHYTOALEXINS TYPES - PHYTOALEXIN-SYN COMMON-NAME - Flavonoid Phytoalexins Biosynthesis COMMENT - This class contains pathways of biosynthesis of phytoalexins, which are derived from different flavonoids in response to pathogens and other stress related factors such as UV and wounding. // UNIQUE-ID - INDOLE-PHYTOALEXIN-SYN TYPES - PHYTOALEXIN-SYN COMMON-NAME - Indole Phytoalexins Biosynthesis COMMENT - This class contains pathways of biosynthesis of phytoalexins, which contain the indole ring system in their structure. Indolephytoalexins are antibiotics produced by plants in response to entry of infectious agents // UNIQUE-ID - ISOFLAVONOID-PHYTOALEXINS TYPES - PHYTOALEXIN-SYN COMMON-NAME - Isoflavonoid Phytoalexins Biosynthesis COMMENT - This class contains pathways of biosynthesis of phytoalexins, which contain the unique structure of isoflavonoids characterized by the 2,3-aryl migration on the B ring. Isoflavonoid phytoalexins are involved in the plant defense against pathogen attacks as well as other aspects of plant-environment interactions. // UNIQUE-ID - STILBENE-PHYTOALEXINS TYPES - PHYTOALEXIN-SYN COMMON-NAME - Stilbene Phytoalexins Biosynthesis COMMENT - This class contains pathways of biosynthesis of phytoalexins, which derive from the secondary metabolite class of stilbenes being induced upon biotic stress such as pathogenic attacks. // UNIQUE-ID - TERPENOID-PHYTOALEXINS TYPES - PHYTOALEXIN-SYN COMMON-NAME - Terpenoid Phytoalexins Biosynthesis COMMENT - This class contains pathways of biosynthesis of phytoalexins, which derive from the various subclasses of terpenoids. Terpenoid phytoalexins are antibiotics involved in the plant defense system that are formed in response to microbial attacks. // UNIQUE-ID - Cyclitols-Biosynthesis TYPES - SUGAR-DERIVS COMMON-NAME - Cyclitols Biosynthesis COMMENT - This class contains pathways of biosynthesis of various cyclitols, cyclic inositol varying in their stereochemistry and their derivation (esterification, glycosylation, phospholipid forms), mostly found in plants. // UNIQUE-ID - DITERPENOID-SYN TYPES - Terpenoid-Biosynthesis COMMON-NAME - Diterpenoids Biosynthesis COMMENT - This class contains pathways of biosynthesis of terpenoids classified by the homologous series of 4 isoprene (C20) units in their structure involved e.g. in various regulatory aspects of plant development. // UNIQUE-ID - ISOPRENOIDS TYPES - Terpenoid-Biosynthesis COMMON-NAME - Hemiterpenes Biosynthesis COMMENT - This class contains pathways of biosynthesis of isoprenes units which are central secondary metabolites used in the biosynthesis of terpenoids. SYNONYMS - Isoprenes // UNIQUE-ID - MONOTERPENOID-SYN TYPES - Terpenoid-Biosynthesis COMMON-NAME - Monoterpenoids Biosynthesis COMMENT - This class contains pathways of biosynthesis of terpenoids classified by the homologous series of 2 isoprene (C10) units in their structure derived from the plastidial, mevalonate-independent pathway for isoprenoid metabolism. // UNIQUE-ID - POLYTERPENOID-SYN TYPES - Terpenoid-Biosynthesis COMMON-NAME - Polyterpenoids Biosynthesis COMMENT - This class contains pathways of biosynthesis of terpenoids classified by the homologous series of more than 8 isoprene (C40) units in their structure derived from the cytosolic classical acetate/mevalonate pathway. // UNIQUE-ID - SESQUITERPENOID-SYN TYPES - Terpenoid-Biosynthesis COMMON-NAME - Sesquiterpenoids Biosynthesis COMMENT - This class contains pathways of biosynthesis of terpenoids classified by the homologous series of 3 isoprene (C15) units in their structure involved e.g. in the biosynthesis of various biological active compounds. // UNIQUE-ID - TETRATERPENOID-SYN TYPES - Terpenoid-Biosynthesis COMMON-NAME - Tetraterpenoids Biosynthesis COMMENT - This class, also referred to as carotenoids, contains pathways of biosynthesis of terpenoids classified by the homologous series of 8 isoprene (C40) units in their structure. These compounds serve important biological functions in a variety of organisms. // UNIQUE-ID - TRITERPENOID-SYN TYPES - Terpenoid-Biosynthesis COMMON-NAME - Triterpenoids Biosynthesis COMMENT - This class contains pathways of biosynthesis of terpenoids classified by the homologous series of 6 isoprene (C30) units in their structure derived from the cytosolic classical acetate/mevalonate pathway. // UNIQUE-ID - Taurine-degradation TYPES - MISCELLANEOUS-DEG COMMON-NAME - Taurine Degradation // UNIQUE-ID - Chlorobenzene-Degradation TYPES - Chloroaromatic-Compounds-Degradation COMMON-NAME - Chlorobenzene Degradation COMMENT - This class holds pathways for the degradation of chloro-substituted benzenes // UNIQUE-ID - Chlorobenzoate-Degradation TYPES - Chloroaromatic-Compounds-Degradation COMMON-NAME - Chlorobenzoate Degradation COMMENT - This class holds pathways for the degradation of chlorobenzoate // UNIQUE-ID - Chlorocatechol-Degradation TYPES - Chloroaromatic-Compounds-Degradation COMMON-NAME - Chlorocatechol Degradation COMMENT - This class holds pathways for the degradation of chloro-substituted catechols // UNIQUE-ID - Chlorotoluene-Degradation TYPES - Chloroaromatic-Compounds-Degradation COMMON-NAME - Chlorotoluene Degradation COMMENT - This class holds pathways for the degradationn of chlorotoluene compounds. // UNIQUE-ID - Dinitrotoluene-Degradation TYPES - Nitroaromatic-Degradation COMMON-NAME - Dinitrotoluene Degradation COMMENT - This class holds pathways for the degradation of the nitroaromatic compounds dinitrotoluenes // UNIQUE-ID - Nitro-Toluene-Degradation TYPES - Nitroaromatic-Degradation COMMON-NAME - Nitrotoluene Degradation COMMENT - This class holds pathways for the degradation of different members of the nitroaromatic compound nitrotoluene // UNIQUE-ID - Nitrobenzene-Degradation TYPES - Nitroaromatic-Degradation COMMON-NAME - Nitrobenzene Degradation COMMENT - This class holds pathways for the degradation of the aromatic compound nitrobenzene // UNIQUE-ID - Nitrobenzoate-Degradation TYPES - Nitroaromatic-Degradation COMMON-NAME - Nitrobenzoate Degradation COMMENT - This class holds pathways for the degradation of different members of the nitroaromatic compound nitrobenzoate // UNIQUE-ID - Nitrophenol-Degradation TYPES - Phenolic-Compounds-Degradation TYPES - Nitroaromatic-Degradation COMMON-NAME - Nitophenol Degradation COMMENT - This class holds pathways for the degradation of all forms of the aromatic compound nitrophenol // UNIQUE-ID - Phenol-Degradation TYPES - Phenolic-Compounds-Degradation COMMON-NAME - Phenol Degradation COMMENT - This class holds pathways for the degradation of phenol and its derivatives // UNIQUE-ID - Phenylacetate-Degradation TYPES - Phenolic-Compounds-Degradation COMMON-NAME - Phenylacetate Degradation COMMENT - This class holds pathways for the degradation of phenylacetate // UNIQUE-ID - Atrazine-Degradation TYPES - s-Triazine-Degradation COMMON-NAME - Atrazine Degradation COMMENT - This class holds pathways for the degradation of atrazine // UNIQUE-ID - 4-Toluenesulfonate-Degradation TYPES - Sulfoaromatics-Degradation COMMON-NAME - 4-Toluenesulfonate Degradation COMMENT - This class holds pathways for the degradation of 4-Toluenesulfonate. // UNIQUE-ID - Autotrophic-CO2-Fixation TYPES - CO2-Fixation COMMON-NAME - Autotrophic CO2 Fixation COMMENT - This class holds pathways used for autotrophic carbon dioxide fixation // UNIQUE-ID - Glycogen-Degradation TYPES - POLYSACCHARIDES-DEG COMMON-NAME - Glycogen Degradation COMMENT - This class holds pathways for the degradation of glycogen // UNIQUE-ID - D-Arabinose-Degradation TYPES - Sugars-And-Polysaccharides COMMON-NAME - D-arabinose Degradation // UNIQUE-ID - GALACTOSE-DEGRADATION TYPES - Sugars-And-Polysaccharides COMMON-NAME - Galactose Degradation COMMENT - This class holds pathways for the assimilation of galactose // UNIQUE-ID - L-Arabinose-Degradation TYPES - Sugars-And-Polysaccharides COMMON-NAME - L-arabinose Degradation COMMENT - This class contains pathways for the degradation of the L- enantiomeric form of the pentose /sugar arabinose. // UNIQUE-ID - LACTOSE-DEG TYPES - Sugars-And-Polysaccharides COMMON-NAME - Lactose Degradation COMMENT - This class contains pathways by which various organisms degrade the disaccharide, lactose, to utilize it as a source of nutrients and energy. // UNIQUE-ID - SUCROSE-DEG TYPES - Sugars-And-Polysaccharides COMMON-NAME - Sucrose Degradation COMMENT - This class contains pathways by which various organisms utilize the disaccharide, sucrose, as a source of carbon and metabolic energy and also a precursor of starch. // UNIQUE-ID - Trehalose-Degradation TYPES - Sugars-And-Polysaccharides COMMON-NAME - Trehalose Degradation COMMENT - This class holds pathways for the degradation of the sugar trehalose // UNIQUE-ID - Xylose-Degradation TYPES - Sugars-And-Polysaccharides COMMON-NAME - Xylose Degradation COMMENT - This class contains pathways for the degradation of the pentose sugar xylose (D-xylose). // UNIQUE-ID - Methyl-Citrate-Cycle TYPES - Propionate-Degradation COMMON-NAME - 2-Methylcitrate Cycle COMMENT - This class holds different variants of the 2-methylcitrate cycle // UNIQUE-ID - Abscisic-Acid-Degradation TYPES - PLANT-HORMONE-DEG TYPES - Sesquiterpenoid-Degradation COMMON-NAME - Abscisic Acid Degradation // UNIQUE-ID - AUXINS-DEGRADATION TYPES - PLANT-HORMONE-DEG COMMON-NAME - Auxins Degradation COMMENT - This class contains pathways of the degradation of auxins, which are commonly found in plants, and promote or inhibit cell growth. Auxins are involved in phototropism, gravitropism, apical dominance and leaf abscission. // UNIQUE-ID - CYTOKININS-DEGRADATION TYPES - PLANT-HORMONE-DEG COMMON-NAME - Cytokinins Degradation COMMENT - This class contains pathways of the degradation of cytokinins, which are prenylated adenine derivatives promoting cell division and delay senescence. // UNIQUE-ID - GIBBERELLINS-DEGRADATION TYPES - PLANT-HORMONE-DEG COMMON-NAME - Gibberellins Degradation // UNIQUE-ID - Ammonia-oxidation TYPES - NITROGEN-DEG COMMON-NAME - Ammonia oxidation // UNIQUE-ID - Nitrate-Reduction TYPES - NITROGEN-DEG COMMON-NAME - Nitrate Reduction COMMENT - This class holds pathways for nitrate reduction // UNIQUE-ID - Dimethylsulfide-Degradation TYPES - Sulfur-Assimilation COMMON-NAME - Dimethylsulfide Degradation COMMENT - This class holds pathways for the degradation or utilization of dimethylsulfide (DMS). // UNIQUE-ID - Dimethylsulfoniopropionate-Degradation TYPES - Sulfur-Assimilation COMMON-NAME - Dimethylsulfoniopropionate Degradation COMMENT - This class hoplds pathways for the degradation of the marine osmolyte dimethylsulfoniopropionate. // UNIQUE-ID - Methylthiopropionate-Degradation TYPES - Sulfur-Assimilation COMMON-NAME - Methylthiopropionate Degradation COMMENT - This class holds pathways for the degradation of methylthiopropionate // UNIQUE-ID - Sulfate-Reduction TYPES - Sulfur-Assimilation COMMON-NAME - Sulfate Reduction // UNIQUE-ID - Sulfide-Oxidation TYPES - Sulfur-Assimilation COMMON-NAME - Sulfide Oxidation COMMENT - This class holds pathways for the oxidation of sulfide and elemental sulfur // UNIQUE-ID - Sulfite-Oxidation TYPES - Sulfur-Assimilation COMMON-NAME - Sulfite Oxidation COMMENT - This class holds pathways for the oxidation of sulfite // UNIQUE-ID - Sulfoacetaldehyde-Degradation TYPES - Sulfur-Assimilation COMMON-NAME - Sulfoacetaldehyde Degradation COMMENT - This class holds pathways for the degradation of sulfoacetaldehyde. // UNIQUE-ID - Sulfur-Disproportionation TYPES - Sulfur-Assimilation COMMON-NAME - Sulfur Disproportionation COMMENT - This class holds pathways for the disproportionation of inorganic sulfur compounds, /such as elemental sulfur and thiosulfate. // UNIQUE-ID - Sulfur-Oxidation TYPES - Sulfur-Assimilation COMMON-NAME - Sulfur Oxidation COMMENT - This class holds pathways for the oxidation and disproportionation of elemental sulfur compounds // UNIQUE-ID - Sulfur-reduction TYPES - Sulfur-Assimilation COMMON-NAME - Sulfur Reduction COMMENT - This class holds pathways for the reduction of elemental sulfur // UNIQUE-ID - Tetrathionate-Reduction TYPES - Sulfur-Assimilation COMMON-NAME - Tetrathionate Reduction COMMENT - This class holds pathways for the reduction of tetrathionate // UNIQUE-ID - Thiosulfate-Disproportionation TYPES - Sulfur-Assimilation COMMON-NAME - Thiosulfate Disproportionation // UNIQUE-ID - Thiosulfate-Oxidation TYPES - Sulfur-Assimilation COMMON-NAME - Thiosulfate Oxidation COMMENT - This class holds pathways for the oxidation of thiosulfate. // UNIQUE-ID - ALKALOIDS TYPES - N-CONTAINING-SECONDARY-CMPD-DEG COMMON-NAME - Alkaloids Degradation // UNIQUE-ID - N-CONTAINING-GLUCOSIDE-DEG TYPES - N-CONTAINING-SECONDARY-CMPD-DEG COMMON-NAME - Nitrogen Containing Glucosides Degradation COMMENT - This class contains catabolic pathways of nitrogen containing glycosides, mainly cyanogenic glycosides and glucosinolates. These compounds occur as glycosides and function as defense compounds. They are activated after the removal of the glucose moiety by the action of a beta-glucosidase. // UNIQUE-ID - CYCLITOLS-DEG TYPES - Sugar-Derivatives COMMON-NAME - Cyclitols Degradation COMMENT - This class contains pathways of degradation/utilization of various cyclitols, cyclic inositol varying in their stereochemistry and their derivation (esterification, glycosylation, phospholipid forms), mostly found in plants. // UNIQUE-ID - SUGAR-ACIDS-DEG TYPES - Sugar-Derivatives COMMON-NAME - Sugar Acids Degradation COMMENT - This class contains pathways of utilization of various sugar acids and their esters as sources of carbon and energy. // UNIQUE-ID - SUGAR-ALCOHOLS-DEG TYPES - Sugar-Derivatives COMMON-NAME - Sugar Alcohols Degradation COMMENT - This class contains pathways of utilization of various sugar alcohols as sources of carbon and energy. // UNIQUE-ID - Carveol-Degradation TYPES - TERPENOID-DEG COMMON-NAME - Carveol Degradation COMMENT - This class holds pathways for the degradation of carveol // UNIQUE-ID - ISOPRENOIDS-DEG TYPES - TERPENOID-DEG COMMON-NAME - Hemiterpenes Degradation COMMENT - This class contains pathways of utilization of isoprenes which are central secondary metabolites used in the biosynthesis of terpenoids. SYNONYMS - Isoprenes // UNIQUE-ID - Limonene-Degradation TYPES - TERPENOID-DEG COMMON-NAME - Limonene Degradation COMMENT - This class holds pathways for the degradation of limonene // UNIQUE-ID - Sesquiterpenoid-Degradation TYPES - TERPENOID-DEG COMMON-NAME - Sesquiterpenoids Degradation // UNIQUE-ID - Tetraterpenoid-Degradation TYPES - TERPENOID-DEG COMMON-NAME - Tetraterpenoids Degradation // UNIQUE-ID - Tetrathionate-Oxidation TYPES - AEROBIC-RESPIRATION COMMON-NAME - Tetrathionate Oxidation COMMENT - This class holdspathways for the oxidation of tetrathionate // UNIQUE-ID - Protein-DNA-Binding-Reactions TYPES - Binding-Reactions TYPES - DNA-Reactions TYPES - Protein-Reactions COMMENT - Reactions in which a protein (such as a monomer, a protein complex, or a modified protein) binds to a region of DNA. /Example: a histone binding to a DNA region. // UNIQUE-ID - Protein-Ligand-Binding-Reactions TYPES - Binding-Reactions TYPES - Protein-Reactions COMMON-NAME - Protein-Ligand-Binding-Reactions COMMENT - This class describes the noncovalent binding of a protein to a ligand (either a small molecule or another /macromolecule) to form an instance of Protein-Small-Molecule-Complexes, or the reverse process /in which a complex dissociates into its protein and ligand constituent parts. // UNIQUE-ID - Composite-Reactions TYPES - Chemical-Reactions COMMENT - A composite reaction R is represented both as a net chemical /transformation, and a set of sub-reactions of which R is comprised. /Those sub-reactions represent finer grained details of the reaction. /Thus, composite reactions may have their mechanistic details recorded, /when such information is available. The relationships among the /sub-reactions are stored in the same way as are the relationships of /reactions within a pathway. As a result, composite reactions exhibit /hybrid properties: internally, they are constructed like pathways, and /externally, they look like reactions. / /The LEFT and RIGHT slots of composite reactions reflect the overall /inputs and outputs of the composite transformation. At a later point /in time, these slots should be automatically kept in synch with the /sub-reactions. However, currently the Reaction Editor will have the /burden of updating the LEFT and RIGHT slots. // UNIQUE-ID - EC-Reactions TYPES - Chemical-Reactions COMMENT - This class is the root of the Enzyme Commision reaction ontology. All reactions that have EC numbers (partial or complete) /will reside under this class. For example, the class denoting EC number "1.2.3" will be a parent of the instance denoting the /reaction whose EC number is "1.2.3.4", and of zero or more instances denoting reactions assigned a partial EC number of "1.2.3.-". /Partial EC numbers indicate that the class of the reaction is known, but no sequence number within the class has been /officially assigned. / // UNIQUE-ID - Protein-Modification-Reactions TYPES - Protein-Reactions TYPES - Chemical-Reactions COMMENT - Reactions in which a protein (such as a monomer, a protein complex or a modified protein) is covalently modified. // UNIQUE-ID - TR-13 TYPES - Chemical-Reactions TYPES - Transport-Reactions COMMON-NAME - ATP-driven Transporters COMMENT - ATP-driven transporters use the hydrolysis of ATP to provide energy to drive the active uptake and/or extrusion of a solute or solutes. // UNIQUE-ID - TR-14 TYPES - Chemical-Reactions TYPES - Transport-Reactions COMMON-NAME - PEP-dependent Transporters COMMENT - Phosphoenolpyruvate (PEP)-dependent phosphotransferase system (PTS) transporters are group translocation systems that use PEP as energy source and phosphate donor to drive uptake and concomitant phosphorylation of their sugar substrates. // UNIQUE-ID - TR-15 TYPES - Chemical-Reactions TYPES - Transport-Reactions COMMON-NAME - Decarboxylation-driven Transporters COMMENT - Decarboxylation-driven transporters use decarboxylation of a cytoplasmic substrate to drive uptake or export of another substrate. // UNIQUE-ID - TR-11 TYPES - Transport-Reactions COMMON-NAME - Channel-type Facilitators COMMENT - Channels mediate facilitated diffusion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism. // UNIQUE-ID - TR-12 TYPES - Transport-Reactions COMMON-NAME - Secondary Transporters COMMENT - Secondary Transporters use chemiosmotic energy in the form of a proton, sodium or other ion or solute gradient to drive uptake or export of substrates. Secondary transporters can catalyze uniport (a single species is transported by facilitated diffusion), antiport (two or more species are transported in opposite directions) and/or symport (two or more species are transported together in the same direction). // UNIQUE-ID - TR-16 TYPES - Transport-Reactions COMMON-NAME - Electron-flow-driven Transporters COMMENT - Electron-flow-driven transporters catalyze electron flow across a biological membrane, from donors localized to one side of the membrane to acceptors localized on the other side. These systems contribute to or subtract from the membrane potential, depending on the direction of electron flow. // UNIQUE-ID - TR-17 TYPES - Transport-Reactions COMMON-NAME - Light-driven Transporters COMMENT - Light-driven transporters utilize light energy to drive transport of a solute. // UNIQUE-ID - TR-18 TYPES - Transport-Reactions COMMON-NAME - Mechanically driven Transporters // UNIQUE-ID - TR-19 TYPES - Transport-Reactions COMMON-NAME - Transporters of Unknown Mechanism COMMENT - Transporters of unknown biochemical mechanism, where a transport function has been established, but either the mode of transport or the energy coupling mechanism is not known. // UNIQUE-ID - DNA-Reactions TYPES - Polynucleotide-Reactions COMMENT - Reactions in which at least one substrate is a DNA segment, a complex containing a DNA segment, or a modified DNA segment. // UNIQUE-ID - RNA-Reactions TYPES - Polynucleotide-Reactions COMMENT - Reactions in which at least one substrate is an RNA, a complex containing an RNA, or a modified RNA. // UNIQUE-ID - TAX-35493 TYPES - TAX-33090 COMMON-NAME - Streptophyta SYNONYMS - Streptophyta Bremer 1985 // UNIQUE-ID - TAX-33208 TYPES - TAX-33154 COMMON-NAME - Metazoa SYNONYMS - multicellular animals SYNONYMS - metazoans SYNONYMS - animals SYNONYMS - Animalia // UNIQUE-ID - TAX-4751 TYPES - TAX-33154 COMMON-NAME - Fungi SYNONYMS - fungi // UNIQUE-ID - BC-1 TYPES - MultiFun COMMON-NAME - metabolism // UNIQUE-ID - BC-2 TYPES - MultiFun COMMON-NAME - information transfer // UNIQUE-ID - BC-3 TYPES - MultiFun COMMON-NAME - regulation // UNIQUE-ID - BC-4 TYPES - MultiFun COMMON-NAME - transport // UNIQUE-ID - BC-5 TYPES - MultiFun COMMON-NAME - cell processes // UNIQUE-ID - BC-6 TYPES - MultiFun COMMON-NAME - cell structure // UNIQUE-ID - BC-7 TYPES - MultiFun COMMON-NAME - location of gene products // UNIQUE-ID - BC-8 TYPES - MultiFun COMMON-NAME - extrachromosomal COMMENT - Extrachromosomal origin should include chromosomal genes affecting functions of genes of extrachromosomal origin. / // UNIQUE-ID - BC-9 TYPES - MultiFun COMMON-NAME - DNA sites // UNIQUE-ID - Conserved-Hypothetical-ORFs TYPES - ORFs COMMENT - Conserved hypothetical ORFs have homologs, usually in other organisms, but none of those homologs /have known functions. That homologs exist gives us greater confidence that the ORF is truely a /gene, as opposed to being a false-positive prediction of a gene-finding program. // UNIQUE-ID - Conserved-ORFs TYPES - ORFs COMMENT - Conserved ORFs have homologs, usually in other organisms, where one or more of those homologs /have known functions, but the sequence similarity of a conserved ORF to its homologs is not /strong enough to permit inference of function of the conserved ORF. In contrast, /conserved hypothetical ORFs have homologs, but none of those homologs have known functions. // UNIQUE-ID - Unconserved-ORFs TYPES - ORFs COMMENT - Unconserved ORFs do not have known homologs. // UNIQUE-ID - 2-Oxo-carboxylates TYPES - Carboxylates COMMON-NAME - a 2-oxo carboxylate // UNIQUE-ID - 3-Isopropenyl-6-oxoheptanoates TYPES - Carboxylates COMMON-NAME - a 3-isopropenyl-6-oxoheptanoate // UNIQUE-ID - 6-H-5-I-2-methylhexanoates TYPES - Carboxylates COMMON-NAME - a 6-hydroxy-5-isopropenyl-2-methylhexanoate SYNONYMS - a 6-hydroxyisoprop(en)ylmethylhexanoate // UNIQUE-ID - 6-Hydroxy-3-isopropenylheptanoates TYPES - Carboxylates COMMON-NAME - a 6-hydroxy-3-isopropenylheptanoate // UNIQUE-ID - Fatty-Acids TYPES - Carboxylates COMMON-NAME - a fatty acid COMMENT - A fatty acid is a carboxylic acid with a long unbranched aliphatic tail. /Carboxylic acids as short as |FRAME:BUTYRIC_ACID| (4 carbon atoms) are considered to be fatty acids, /even though fatty acids derived from natural fats and oils, such as |FRAME:CPD-195|, /are usually at least 8 carbon atoms long. / /Most of the natural fatty acids have an even number of carbon atoms, since their biosynthesis involves /the addition of two-carbon-atom units. SYNONYMS - a fatty acid anion SYNONYMS - free fatty acid // UNIQUE-ID - Hydroxy-carboxylates TYPES - Carboxylates COMMON-NAME - a hydroxy carboxylate // UNIQUE-ID - Isocitrate TYPES - Carboxylates COMMON-NAME - isocitrate SYNONYMS - isocitric acid // UNIQUE-ID - Long-Chain-Carboxylates TYPES - Carboxylates COMMON-NAME - a long chain carboxylate SYNONYMS - a long chain acid anion // UNIQUE-ID - Alpha-omega-dicarboxylates TYPES - dicarboxylate COMMON-NAME - an α ω dicarboxylate SYNONYMS - an α ω dicarboxylic acid // UNIQUE-ID - C4-dicarboxylates TYPES - dicarboxylate COMMON-NAME - a C4-dicarboxylate // UNIQUE-ID - Hexaric-Acids TYPES - dicarboxylate COMMON-NAME - a hexaric acid // UNIQUE-ID - Pentaric-Acids TYPES - dicarboxylate COMMON-NAME - a pentaric acid // UNIQUE-ID - Hexonic-Acids TYPES - Monocarboxylates COMMON-NAME - a hexonic acid // UNIQUE-ID - Hexuronic-Acids TYPES - Monocarboxylates COMMON-NAME - a hexuronic acid // UNIQUE-ID - Omega-carboxyacyl-CoAs TYPES - Monocarboxylates COMMON-NAME - an ω-carboxyacyl-CoA // UNIQUE-ID - R-2-Haloacids TYPES - Monocarboxylates COMMON-NAME - an (R)-2-haloacid // UNIQUE-ID - R-2-Hydroxyacids TYPES - Monocarboxylates COMMON-NAME - an (R)-2-hydroxyacid COMMENT - The R2 group in this compound represents a halogen. // UNIQUE-ID - S-2-Hydroxyacids1 TYPES - Monocarboxylates COMMON-NAME - an (S)-2-hydroxyacid // UNIQUE-ID - Teichoic-P-Gro TYPES - Teichoic-acid-components COMMON-NAME - a prenyl-P-P-GlcNAc-ManNAc-P-Gro-(P-Gro)n // UNIQUE-ID - Teichoic-P-Gro-Glc TYPES - Teichoic-acid-components COMMON-NAME - a prenyl-P-P-GlcNAc-ManNAc-P-Gro-(P-Gro)m-(Glc)n // UNIQUE-ID - Teichoic-peptidoglycan TYPES - Teichoic-acid-components COMMON-NAME - a peptidoglycan-P-GlcNAc-ManNAc-P-Gro-(P-Gro)m(Glc)n // UNIQUE-ID - Galactosyl-Inositols TYPES - Inositols TYPES - Galactosides COMMON-NAME - a galactosyl inositol // UNIQUE-ID - Inositol-Phosphates TYPES - Inositols COMMON-NAME - an inositol phosphate // UNIQUE-ID - Methyl-Inositols TYPES - Inositols COMMON-NAME - a methylated inositol // UNIQUE-ID - Phosphatidylinositols TYPES - Inositols COMMON-NAME - a phosphatidylinositol // UNIQUE-ID - L-1-phosphatidyl-inositols TYPES - Phosphatidylinositols TYPES - Phosphoglycerides COMMON-NAME - an L-1-phosphatidyl-inositol COMMENT - |FRAME: L-1-phosphatidyl-inositols| is a glycerophospholipid that serves as a a minor component in the cytosolic side of eukaryotic cell membranes. / /The most common fatty acids of phosphatidyl-inositol are |FRAME: STEARIC_ACID| in the SN1 position and |FRAME: ARACHIDONIC_ACID| in the SN2 position. SYNONYMS - a phosphatidylinositol SYNONYMS - 1-Phosphatidyl-D-myo-inositol SYNONYMS - 1-phosphatidylinositol SYNONYMS - L-1-phosphatidylinositol SYNONYMS - phosphatidyl-inositol SYNONYMS - 1-Phosphatidyl-1D-myo-inositol SYNONYMS - Phosphatidyl-1D-myo-inositol SYNONYMS - (3-Phosphatidyl)-1-D-inositol // UNIQUE-ID - 6S-Carveols TYPES - Carveols COMMON-NAME - a (6S)-carveol // UNIQUE-ID - Beta-b-L-arabinosides TYPES - L-Arabinosides COMMON-NAME - a β-L-arabinoside // UNIQUE-ID - Aliphatic-Alpha-Omega-Diamines TYPES - Aliphatic-Diamines COMMON-NAME - an aliphatic α,ω-diamine COMMENT - This compound class stands for generic and unspecified α,ω-diamines. SYNONYMS - aliphatic α,ω-diamine SYNONYMS - an α,ω-diamine SYNONYMS - α,ω-diamine // UNIQUE-ID - Aliphatic-N-Acetyl-Diamines TYPES - Aliphatic-Diamines COMMENT - This compound class stands for generic and unspecified N-acetyl-diamines. SYNONYMS - an aliphatic N-acetyl-diamine SYNONYMS - aliphatic N-acetyl-diamine SYNONYMS - an N-acetyl-diamine SYNONYMS - N-acetyl-diamine // UNIQUE-ID - 2-Arylethylamines TYPES - Arylalkylamines COMMON-NAME - a 2-arylethylamine // UNIQUE-ID - Catechloamines TYPES - Arylalkylamines COMMON-NAME - a catecholamine // UNIQUE-ID - N-Acetylarylalkylamines TYPES - Arylalkylamines COMMON-NAME - an N-acetylarylalkylamine // UNIQUE-ID - Aliphatic-Aldoximes TYPES - Aldoxime COMMON-NAME - an aliphatic aldoxime // UNIQUE-ID - Acyl-L-Lysines TYPES - N-Acylated-Amino-Acids COMMON-NAME - an N6acyl-L-lysine // UNIQUE-ID - Amino-Acids-20 TYPES - Alpha-Amino-Acids COMMON-NAME - a standard α amino acid COMMENT - This compound class contains the standard set of 20 protein-buliding amino acids. /Note that L-proline is included in this group although technically it is not an amino acid. /This class does not include other amino acids even if they have been implicated in protein synthesis. / SYNONYMS - protein-building /amino acid SYNONYMS - amino acid SYNONYMS - L-amino acid SYNONYMS - protein-building amino acid SYNONYMS - proteinogenic amino acid // UNIQUE-ID - Branched-Amino-Acids TYPES - Alpha-Amino-Acids COMMON-NAME - a branched-chain amino acid COMMENT - Branched-chain amino acids (BCAA) refer to the amino acids that have an aliphatic side-chain that is /non-linear. These are |FRAME: LEU|, |FRAME: ILE| and |FRAME: VAL|. SYNONYMS - BCAA // UNIQUE-ID - Non-standard-amino-acids TYPES - Alpha-Amino-Acids COMMON-NAME - a non-standard α amino acid COMMENT - This compound class stands for α amino acids other than the 20 standard protein building amino /acids. /An α amino acid is defined as any molecule that contains both amine and carboxyl functional groups, attached to the same carbon atom. // UNIQUE-ID - L-1-PHOSPHATIDYL-SERINE TYPES - Non-standard-amino-acids TYPES - Phosphoglycerides COMMON-NAME - an L-1-phosphatidylserine SYNONYMS - a 1-phosphatidyl-serine SYNONYMS - a phosphatidyl-L-serine SYNONYMS - a 3-O-sn-phosphatidyl-L-serine SYNONYMS - a phosphatidyl-serine SYNONYMS - an O-sn-phosphatidyl-L-serine SYNONYMS - phosphatidylserine (Ecoli) SYNONYMS - O-sn-phosphatidyl-L-serine SYNONYMS - phosphatidyl-serine SYNONYMS - 3-O-sn-phosphatidyl-L-serine SYNONYMS - phosphatidyl-L-serine SYNONYMS - 1-phosphatidyl-serine // UNIQUE-ID - N-Carbamoyl-D-Amino-Acids TYPES - Non-alpha-amino-acids COMMON-NAME - an N-carbamoyl D-amino acid // UNIQUE-ID - N-Carbamoyl-L-Amino-Acids TYPES - Non-alpha-amino-acids COMMON-NAME - an N-carbamoyl-L-2-amino acid SYNONYMS - an N-carbamoyl-L-amino acid // UNIQUE-ID - Negatively-charged-polar-amino-acids TYPES - Polar-amino-acids COMMON-NAME - a negatively-charged polar amino acid COMMENT - This class stands for all of the negatively-charged polar amino acids. /It contains both α and non-α amino acids. // UNIQUE-ID - Positively-charged-polar-amino-acids TYPES - Polar-amino-acids COMMON-NAME - a positively-charged polar amino acid COMMENT - This class stands for all of the positively-charged polar amino acids. /It contains both α and non-α amino acids. // UNIQUE-ID - Uncharged-polar-amino-acids TYPES - Polar-amino-acids COMMON-NAME - an uncharged polar amino acid COMMENT - This class stands for all of the non-charged polar amino acids. /It contains both α and non-α amino acids. // UNIQUE-ID - alpha-N-Peptidyl-LGlutamate TYPES - CPD-11500 TYPES - Protein-Glutamates COMMON-NAME - an α-N-peptidyl-L-glutamate // UNIQUE-ID - Protein-gamma-glutamates TYPES - CPD-11500 TYPES - Protein-Glutamates COMMON-NAME - a protein-γ-glutamate // UNIQUE-ID - MOD-PROT-CYS TYPES - PROT-CYS COMMON-NAME - a modified protein cysteine // UNIQUE-ID - Peptide-C-terminal-Glycines TYPES - Protein-Glycines COMMON-NAME - C-terminal peptide glycine COMMENT - a peptide in which glycine is the penultimate amino acid // UNIQUE-ID - Protein-N-methyl-histidines TYPES - Protein-Histidines COMMON-NAME - a protein Nτ-methyl-histidine SYNONYMS - a protein 3-N-methylhistidine SYNONYMS - a protein 3-methylhistidine SYNONYMS - protein N3-methyl-histidine // UNIQUE-ID - Protein-phospho-L-histidines TYPES - Protein-Histidines COMMON-NAME - a protein N-phospho-L-histidine COMMENT - This entry has been included to accommodate those protein-histidines for which the phosphorylation site has not been established // UNIQUE-ID - Cytochrome-c-arginines TYPES - Protein-L-Arginines COMMON-NAME - [cytochrome c]-L-arginine // UNIQUE-ID - Cytochrome-c-N-O-methyl-arginines TYPES - Protein-L-Arginines COMMON-NAME - [cytochrome c]-Nω-methyl-arginine // UNIQUE-ID - Histone-L-arginines TYPES - Protein-L-Arginines COMMON-NAME - [histone]-L-arginine // UNIQUE-ID - Histone-N-o-methyl-arginines TYPES - Protein-L-Arginines COMMON-NAME - [histone]-Nω-methyl-arginine // UNIQUE-ID - Myelin-L-arginines TYPES - Protein-L-Arginines COMMON-NAME - [myelin basic protein]-L-arginine // UNIQUE-ID - Myelin-N-o-methyl-arginines TYPES - Protein-L-Arginines COMMON-NAME - [myelin basic protein]-Nω-methyl-arginine // UNIQUE-ID - Peptide-3-hydroxy-L-Aspartates TYPES - Protein-L-Aspartates COMMON-NAME - a peptide 3-hydroxy-L-aspartate // UNIQUE-ID - PROTEIN-L-BETA-ISOSPARTATE-METHYL-ESTERS TYPES - PROTEIN-L-BETA-ISOASPARTATES COMMON-NAME - a protein L-β-isoaspartate α-methyl ester COMMENT - This compound class stands for generic and unspecified protein L-β-aspartate methyl esters. // UNIQUE-ID - CPD-8649 TYPES - Protein-L-lysine COMMON-NAME - a protein L-allysine // UNIQUE-ID - Cytochrome-c-L-lysine TYPES - Protein-L-lysine COMMON-NAME - a [cytochrome c]-L-lysine // UNIQUE-ID - EIF5A-LYSINE TYPES - Protein-L-lysine COMMON-NAME - an eIF5A lysine SYNONYMS - an eIF5A-L-lysine // UNIQUE-ID - Protein-N-6-octanoyl-lysines TYPES - Protein-L-lysine COMMON-NAME - a protein-N-6-octanoyl-lysine // UNIQUE-ID - PROTEIN-N-UBIQUITYL-LYSINE TYPES - Protein-L-lysine COMMON-NAME - a protein-N-ubiquityl-lysine // UNIQUE-ID - Tubulin-L-Lysine TYPES - Protein-L-lysine COMMON-NAME - an [α-tubuline]-L-lysine // UNIQUE-ID - Cytochrome-c-L-methionine TYPES - Protein-L-methionine COMMON-NAME - a [cytochrome c]-methionine // UNIQUE-ID - Protein-L-methionine-R-S-oxides TYPES - Protein-L-methionine COMMON-NAME - a protein-L-methionine-(R)-S-oxide SYNONYMS - a peptide-L-methionine-(R)-S-oxide // UNIQUE-ID - Protein-L-Methionine-S-Oxides TYPES - Protein-L-methionine COMMON-NAME - a protein-L-methionine-(S)-S-oxide COMMENT - This compound class stands for generic and unspecified protein L-methionine S-oxides. SYNONYMS - a peptide-L-methionine-(S)-S-oxide // UNIQUE-ID - LDL-receptor-L-serine TYPES - Protein-L-serines COMMON-NAME - [low-density-lipoprotein receptor]-L-serine // UNIQUE-ID - Protein-tyrosine-phosphates TYPES - Protein-Tyrosines COMMON-NAME - a protein-L-tyrosine phosphate COMMENT - This compound class stands for generic and unspecified protein tyrosine phosphates. SYNONYMS - protein tyrosine phosphate SYNONYMS - a protein tyrosine phosphate SYNONYMS - a protein-tyrosine-phosphate // UNIQUE-ID - Thyroglobulin-3-5-diiodotyrosines TYPES - Protein-Tyrosines COMMON-NAME - [thyroglobulin]-3,5-diiodotyrosine // UNIQUE-ID - Thyroglobulin-3-iodotyrosines TYPES - Protein-Tyrosines COMMON-NAME - [thyroglobulin]-3-iodotyrosine // UNIQUE-ID - Thyroglobulin-L-thyroxines TYPES - Protein-Tyrosines COMMON-NAME - [thyroglobulin]-L-thyroxine SYNONYMS - thyroglobulin 3,5,3'5'-tetraiodo-L-thyronine // UNIQUE-ID - Thyroglobulin-L-tyrosines TYPES - Protein-Tyrosines COMMON-NAME - [thyroglobulin]-L-tyrosine // UNIQUE-ID - Thyroglobulin-triiodothyronines TYPES - Protein-Tyrosines COMMON-NAME - [thyroglobulin]-triiodothyronine SYNONYMS - thyroglobulin L-3,5,3'-triiodothyronine // UNIQUE-ID - Galactosides TYPES - Glycosides COMMON-NAME - a galactoside // UNIQUE-ID - Glucosides TYPES - Glycosides COMMON-NAME - a glucoside // UNIQUE-ID - Glucuronides TYPES - Glycosides COMMON-NAME - a glucoronide COMMENT - Includes both α and β glucuronides. / // UNIQUE-ID - Pyranosides TYPES - Glycosides COMMON-NAME - a pyranoside // UNIQUE-ID - NDP-sugars TYPES - NUCLEOTIDE-SUGARS COMMON-NAME - an NDP-sugar // UNIQUE-ID - ADP-D-Ribosyl-Acceptors TYPES - ADP-SUGARS COMMON-NAME - a ADP-D-ribosyl acceptor // UNIQUE-ID - ADP-RIBOSE-P-OR-NOP TYPES - ADP-SUGARS COMMON-NAME - an ADP-ribose // UNIQUE-ID - UDP-N-acetylmuramoyl-Tripeptide TYPES - UDP-sugar COMMON-NAME - a UDP-N-acetylmuramoyl-tripeptide // UNIQUE-ID - UDP-NAcMur-Peptides TYPES - UDP-sugar COMMON-NAME - a UDP-N-acetylmuramoyl-pentapeptide COMMENT - The peptide moiety, which is bound through its N terminus to the carboxyl group of muramate and /contains alternating L and D amino acids, reveals considerable variation. /The amino acid linked directly to muramate is usually |FRAME:L-ALPHA-ALANINE|, but in some cases /can be replaced by |FRAME: GLY| or |FRAME: SER| |CITS: [5777324][5965240][4385976][6029599] /[5704800][5469569][6033749]|. / /The most common amino acid in the second position is |FRAME: D-GLT|, but in some cases (in a few /coryneform bacteria) it is hydroxylated to |FRAME: CPD-7688| |CITS: [6072398]|. In some organisms the /α-carboxyl group of |FRAME: D-GLT| is modified by amidation or substituted by |FRAME: GLY| /|CITS: [5965232][6064598]|, by |FRAME: GLYCINAMIDE| |CITS: [Interschick70]|, or by |FRAME: CPD-7692| /|CITS: [4683671]|. / /The greatest variation occurs at position 3. The residue at this position is usually a diamino acid and is /involved in cross-linking through the second amino group. The most common /residue at this position is |FRAME: MESO-DIAMINOPIMELATE|, which is present in probably all /Gram-negative bacteria and in many other organisms, such as some species of bacilli, clostridia, /lactobacilli, corynebacteria, propionibacteria, Actinomycetales, Myxobacteriales, Rickettsiae, and /cyanobacteria |CITS: [410379][6131881]| (see |FRAME:PEPTIDOGLYCANSYN-PWY|). /The second common residue at this position is |FRAME: LYS|, but other substituition have been /documented, including |FRAME: L-ORNITHINE| |CITS: [4884715][14152785][6035494][6031807]|, /|FRAME:LL-DIAMINOPIMELATE| |CITS: [14024243][13882624][13525638][11945321]|, /|FRAME: CPD-7690| |CITS: [5870104]|, and |FRAME: CPD-7689| |CITS: [16562051]|. /In some cases the diamino acid in position 3 is not involved in cross linking. In these cases /the residue in position 3 can be |FRAME: N-ACETYL-L-24-DIAMINOBUTANOATE|, as in the case of /Clavibacter michiganensis |CITS: [5704800][5119774]|, or even a monoamino acid, such as /|FRAME:L-ALPHA-ALANINE| |FRAME: GLT| |CITS: [4259817]| or |FRAME: HOMO-SER| /|CITS: [5119774][5119774 ][5469569]|. / /Position 4 and 5 are almost always occupied by |FRAME: D-ALA-D-ALA| di-peptide. In several species /enterococci and lactobacilli, the terminal |FRAME:D-ALANINE| is replaced by |FRAME:D-LACTATE| /|CITS: [1503450]| or |FRAME:D-SERINE| |CITS: [8852545]|, which entails resistance to the glycopeptide /antibiotic vancomycin. SYNONYMS - a UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-X- D-alanyl-D-alanine // UNIQUE-ID - NAcMur-4Peptide-NAcGlc-Undecaprenols TYPES - Peptidoglycans COMMON-NAME - a N-acetylglucosamine--N-acetylmuramyl-(tetrapeptide) pyrophosphoryl-undecaprenol COMMENT - This is the lipid-anchored monomer subunit of peptidoglycan, following the cleavage of the last D-ala residue of the pentapeptide. SYNONYMS - a GlcNAc-(1->4)-MurNAc-tetrapeptide-diphosphoundecaprenol // UNIQUE-ID - NAcMur-Peptide-NAcGlc-Undecaprenols TYPES - Peptidoglycans COMMON-NAME - a N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol COMMENT - This is the lipid-anchored monomer subunit of peptidoglycan SYNONYMS - a GlcNAc-(1->4)-MurNAc-pentapeptide-diphosphoundecaprenol SYNONYMS - a lipid II // UNIQUE-ID - Beta-Glucoside-6-P TYPES - Sugar-Phosphate COMMON-NAME - a β-glucoside-6-phosphate // UNIQUE-ID - Hexose-phosphates TYPES - Sugar-Phosphate COMMON-NAME - a hexose phosphate // UNIQUE-ID - Pentose-phosphates TYPES - Sugar-Phosphate COMMON-NAME - a pentose phosphate // UNIQUE-ID - Sugar-1-Phosphate TYPES - Sugar-Phosphate COMMON-NAME - a sugar-1-phosphate COMMENT - This compound class stands for generic and unspecified sugar 1-phosphates. // UNIQUE-ID - SUGAR-5-PHOSPHATES TYPES - Sugar-Phosphate COMMON-NAME - a sugar-5-phosphate // UNIQUE-ID - SUGAR-6-PHOSPHATES TYPES - Sugar-Phosphate COMMON-NAME - a sugar-6-phosphate // UNIQUE-ID - Sugar-bisphosphates TYPES - Sugar-Phosphate COMMON-NAME - a sugar bisphosphate // UNIQUE-ID - Modified-Sugars TYPES - Sugar COMMON-NAME - a modified sugar // UNIQUE-ID - Monosaccharides TYPES - Sugar COMMON-NAME - a monosaccharide // UNIQUE-ID - N-Glycans TYPES - Sugar COMMON-NAME - a N-glycan COMMENT - N-Linked glycans are linked to the R-group nitrogen (N) of asparagine in the sequon. The sequon is a Asn-X-Ser or Asn-X-Thr sequence, where X is any amino acid except proline and may be composed of N-acetyl galactosamine, galactose, neuraminic acid, N-acetylglucosamine, fructose, mannose, fucose and other monosaccharides. // UNIQUE-ID - Oligosaccharides TYPES - Sugar COMMON-NAME - an oligosaccharide COMMENT - An oligosaccharide is a saccharide polymer containing a small number (typically three to six) of component sugars, /also known as simple sugars. They are generally found either O- or N-linked to compatible amino /acid side chains in proteins or to lipid moieties. // UNIQUE-ID - Polysaccharides TYPES - Sugar COMMON-NAME - a polysaccharide // UNIQUE-ID - 3-Deoxyoctulosonyl-Lipopolysaccharides TYPES - Lipopolysaccharides COMMON-NAME - a 3-deoxyoctulosonyl-lipopolysaccharide // UNIQUE-ID - Glucosyl-Lipopolysaccharides TYPES - Lipopolysaccharides COMMON-NAME - an α-D-glucosyl-lipopolysaccharide // UNIQUE-ID - Diadenosine-polyphosphates TYPES - Dinucleoside-polyphosphates COMMON-NAME - a diadenosine polyphosphate COMMENT - Several important intracellular and extracellular signaling functions have been ascribed to the diadenosine compounds |FRAME: ADENOSINE5TRIPHOSPHO5ADENOSINE|, |FRAME: ADENOSYL-P4|, |FRAME: CPD0-1137| and |FRAME: CPD-11932| |CITS: [9678598][10551014][10974322][11007994][16688466]|. // UNIQUE-ID - Cyclic-2-3-Ribonucleoside-Monophosphates TYPES - Cyclic-Ribonucleoside-Monophosphates COMMON-NAME - a nucleoside 2',3'-cyclic phosphate // UNIQUE-ID - Cyclic-3-5-Ribonucleoside-Monophosphates TYPES - Cyclic-Ribonucleoside-Monophosphates COMMON-NAME - a nucleoside 3',5'-cyclic phosphate SYNONYMS - 3',5'-cyclic nucleotide // UNIQUE-ID - Deoxy-Ribonucleoside-Diphosphates TYPES - Deoxynucleotides TYPES - Nucleoside-Diphosphates COMMON-NAME - a 2'-deoxyribonucleoside diphosphate SYNONYMS - 2'-deoxyribonucleoside diphosphate SYNONYMS - deoxynucleoside diphosphate SYNONYMS - deoxyribonucleoside diphosphate // UNIQUE-ID - Deoxy-Ribonucleoside-Monophosphates TYPES - Deoxynucleotides COMMON-NAME - a 2'-deoxyribonucleoside monophosphate SYNONYMS - a 2'-deoxynucleoside 5'-phosphate SYNONYMS - a 2'-deoxynucleoside 5'-monophosphate SYNONYMS - a deoxyribonucleoside monophosphate SYNONYMS - a deoxynucleoside monophosphate SYNONYMS - a deoxynucleoside 5'-monophosphate // UNIQUE-ID - Deoxy-Ribonucleoside-Triphosphates TYPES - Deoxynucleotides TYPES - Nucleoside-Triphosphates COMMON-NAME - a 2'-deoxyribonucleoside triphosphate SYNONYMS - a deoxynucleoside triphosphate // UNIQUE-ID - Dinucleotide TYPES - Nucleoside-Diphosphates COMMON-NAME - a dinucleotide // UNIQUE-ID - NUC-5-PHOSPHATE TYPES - Nucleoside-Monophosphates COMMON-NAME - a nucleoside-5'-phosphate SYNONYMS - mononucleotide // UNIQUE-ID - Ribonucleoside-Diphosphates TYPES - Ribonucleotides COMMON-NAME - a ribonucleoside diphosphate SYNONYMS - a nucleoside diphosphate SYNONYMS - ribonucleoside diphosphate SYNONYMS - nucleoside diphosphate // UNIQUE-ID - Ribonucleoside-Monophosphates TYPES - Ribonucleotides COMMON-NAME - a ribonucleoside monophosphate SYNONYMS - nucleotide monophosphate SYNONYMS - a 5'-ribonucleotide // UNIQUE-ID - Ribonucleoside-Triphosphates TYPES - Ribonucleotides COMMON-NAME - a ribonucleoside triphosphate SYNONYMS - nucleoside triphosphate SYNONYMS - ribonucleoside triphosphate // UNIQUE-ID - N6-Alkylaminopurine-glucoside TYPES - N6-Alkylaminopurine COMMON-NAME - an N6-alkylaminopurine-7-β-D-glucoside // UNIQUE-ID - 6-Hydroxy-Purine-Nucleotides TYPES - Purine-Nucleotides COMMON-NAME - a 6-hydroxypurine nucleotide // UNIQUE-ID - Purine-Mononucleotides TYPES - Purine-Nucleotides COMMON-NAME - a purine mononucleotide // UNIQUE-ID - Thiopurine-Methylethers TYPES - Thiopurines COMMON-NAME - a thiopurine S-methylether // UNIQUE-ID - N5-Formyl-THF-Glu TYPES - 5-FORMYL-THF-GLU-N COMMON-NAME - N5-formyl-THF-Glun SYNONYMS - 5-formyl-THF // UNIQUE-ID - Oxidized-Factor-F420 TYPES - Factor-420 COMMON-NAME - oxidized factor F420 COMMENT - One of the distinguishing features of methanogenic bacteria is their blue-green /fluorescence when irradiated with UV light. This fluorescence is due to F420, a cofactor /that was identified on the basis of this feature. /This compound, named for its intense absorbance at 420 nm, was originally isolated by Cheeseman et /al |CITS: [5079072]|, and later identified by Eirich et al as the N-(N-L-lactyl-γ-L-glutamyl)-L- /glutamic acid phosphodiester of 7,8-didemethyl-8-hydroxy-5-deazariboflavin 5'-phosphate |CITS: [728375]|. / /F420 biosynthetic pathway produces the intermediate F420-0, which contains no glutamate side chains. /Glutamates are then added by several enzymes. F420 molecules isolated from different organisms /differ in the number of the glutamate molecules in the side chains, as well as the nature of the bond /(which could be either α or γ) |CITS: [12909715][12867481][11717263]|. // UNIQUE-ID - Reduced-Factor-F420 TYPES - Factor-420 COMMON-NAME - reduced cofactor F420 // UNIQUE-ID - Formyl-methanofurans TYPES - Methanofurans COMMON-NAME - formyl-methanofuran SYNONYMS - 5-formylmethanofuran // UNIQUE-ID - 1-Alkyl-2-acetyl-sn-glycero-3-phosphates TYPES - Diacylglycerides COMMON-NAME - a 1-alkyl-2-acetyl-sn-glycero-3-phosphate // UNIQUE-ID - 1-Alkyl-2-acetyl-sn-glycerols TYPES - Diacylglycerides COMMON-NAME - a 1-alkyl-2-acetyl-sn-glycerol // UNIQUE-ID - DIACYLGLYCEROL TYPES - Diacylglycerides COMMON-NAME - a 1,2-diacylglycerol SYNONYMS - 1,2-diglyceride SYNONYMS - D-1,2-diglyceride SYNONYMS - D-1,2-Diacylglycerol SYNONYMS - 1,2-diacyl-SN-glycerol SYNONYMS - 1,2-diasylglycerol SYNONYMS - a 1,2-diacyl-sn-glycerol SYNONYMS - a D-1,2-diacylglycerol SYNONYMS - DAG // UNIQUE-ID - GLYCOSYLGLYCERIDES TYPES - Diacylglycerides COMMON-NAME - a glycosylglyceride // UNIQUE-ID - 4-isopropenyl-7-methyloxepan-2-one TYPES - Epsilon-lactones TYPES - Monoterpene-Derivatives COMMON-NAME - a 4-isopropenyl-7-methyloxepan-2-one // UNIQUE-ID - 6-isopropenyl-3-methyloxepan-2-one TYPES - Epsilon-lactones TYPES - Monoterpene-Derivatives COMMON-NAME - a 6-isopropenyl-3-methyloxepan-2-one SYNONYMS - a 6-isopropenyl-3-methyl-2oxo-oxepanon SYNONYMS - an isoprop(en)ylmethyloxepan-2-one // UNIQUE-ID - 7-isopropyl-4-methyloxepan-2-ones TYPES - Epsilon-lactones TYPES - Monoterpene-Derivatives COMMON-NAME - a 7-isopropyl-4-methyloxepan-2-one SYNONYMS - a 7-isopropyl-4-methyl-2-oxo-oxepanon // UNIQUE-ID - 2-trans-4-cis-dienoyl-CoAs TYPES - All-Coas COMMON-NAME - a 2-trans-4-cis-dienoyl-CoA // UNIQUE-ID - 3-HYDROXYACYL-COA TYPES - All-Coas COMMON-NAME - a 3-hydroxyacyl-CoA // UNIQUE-ID - 3-KETOACYL-COA TYPES - All-Coas COMMON-NAME - 3-oxoacyl-CoA SYNONYMS - a 3-oxo-acyl-CoA SYNONYMS - RCOCH2CO-CoA SYNONYMS - a 3-ketoacyl-CoA SYNONYMS - β-ketoacyl-CoA // UNIQUE-ID - ACYL-COA TYPES - All-Coas COMMON-NAME - an acyl-CoA SYNONYMS - fatty acyl thioester-CoA SYNONYMS - an acyl-CoA SYNONYMS - RCH2CH2CO-CoA SYNONYMS - acyl-Coenzyme A // UNIQUE-ID - Cis-2-enoyl-CoAs TYPES - All-Coas COMMON-NAME - a cis-2-enoyl-CoA // UNIQUE-ID - CIS-DELTA3-ENOYL-COA TYPES - All-Coas COMMON-NAME - a cis-3-enoyl-CoA SYNONYMS - cis-Δ3-enoyl-CoA // UNIQUE-ID - CPD0-2227 TYPES - All-Coas COMMON-NAME - an octadecenoyl-CoA (n-C18:1CoA) // UNIQUE-ID - CPD0-2228 TYPES - All-Coas COMMON-NAME - a tetradecenoyl-CoA (n-C14:1CoA) // UNIQUE-ID - D2-ENOYL-COA TYPES - All-Coas COMMON-NAME - a 2,3-dehydroacyl-CoA SYNONYMS - a Δ2-enoyl-CoA // UNIQUE-ID - Lactoyl-CoAs TYPES - All-Coas COMMON-NAME - lactoyl-CoA // UNIQUE-ID - Linoleoyl-groups TYPES - All-Coas COMMON-NAME - a lipid linoleoyl group COMMENT - This compound class describes a linoleoyl group that is incorporated within a lipid molecule // UNIQUE-ID - Oleoyl-groups TYPES - All-Coas COMMON-NAME - a lipid oleoyl-group COMMENT - This compound class describes an oleoyl group that is incorporated in a lipid molecule. // UNIQUE-ID - TETRADEHYDROACYL-COA TYPES - All-Coas COMMON-NAME - a trans,trans-Δ2-Δ4-dienoyl-CoA SYNONYMS - trans,trans-2,3,4,5-tetradehydroacyl-CoA SYNONYMS - RCH=CHCH=CHCO-CoA // UNIQUE-ID - Trans-3-enoyl-CoAs TYPES - All-Coas COMMON-NAME - a trans-3-enoyl-CoA // UNIQUE-ID - Abscisic-Acid-Conjugate TYPES - Abscisic-Acid COMMON-NAME - an abscisic acid conjugate // UNIQUE-ID - Abscisic-Acid-Derivative TYPES - Abscisic-Acid COMMON-NAME - an abscisic acid derivative // UNIQUE-ID - 11-Hydroxyjasmonates TYPES - Jasmonates COMMON-NAME - an 11-hydroxyjasmonate COMMENT - This compound has been detected in Solanum demissum |CITS:[HELDER93]|, /Arabidopsis thaliana, and many other plant species |CITS:[17995915]|. At least two stereoisomers, with /different cis and trans configurations on the cyclopentone ring, have been identified in /Arabidopsis thaliana |CITS: [18400744]|. SYNONYMS - an 11-OHJA SYNONYMS - an 11-hydroxyjasmonic acid SYNONYMS - an 11-hydroxy-JA // UNIQUE-ID - 12-Hydroxyjasmonate-Sulfates TYPES - Jasmonates COMMON-NAME - a 12-hydroxyjasmonate sulfate COMMENT - This compound has been detected in Arabidopsis thaliana |CITS:[12637544]| and many other plant /species |CITS:[17995915]|. This compound may not be biologically active. Unlike methyl JA, it does not inhibit germination or /root growth in tomato seedlings |CITS:[17995915]|. It is possible that at least two stereoisomers of this compound, with /different different bond configurations on the cyclopentanone ring, exist in plants. SYNONYMS - a 12-OHJA sulfate SYNONYMS - a 12-hydroxyjasmonic acid sulfate SYNONYMS - a SO4-hydroxy-JA SYNONYMS - a 12-hydroxy-JA sulfate // UNIQUE-ID - 12-Hydroxyjasmonates TYPES - Jasmonates COMMON-NAME - a 12-hydroxyjasmonate COMMENT - 12-OHJA has been detected in Arabidopsis thaliana|CITS:[12637544]| and many other plant species /|CITS:[17995915]|. At least two different stereoisomers, |FRAME: CPD-11260| and |FRAME: CPD-11253|, /exist in Arabidopsis thaliana |CITS: [18400744]|. / /The biological activity of 12-OHJA may differ between species. For example, 12-OHJA /can induce tuber formation in potatoes |CITS:[HELDER93]|, but, in tomato, unlike methyl JA, 12-OHJA does not /inhibit germination or root growth in tomato seedlings |CITS:[17995915]|. 12-OHJA and other jasmonates also prompt /distinct sets of transcriptional changes in tomato |CITS:[17995915]|. / / SYNONYMS - a 12-OHJA SYNONYMS - a 12-hydroxyjasmonic acid SYNONYMS - a 12-hydroxy-JA SYNONYMS - a 12-hydroxyjasmonate SYNONYMS - a (+/-)-12-hydroxyjasmonate SYNONYMS - a tuberonic acid SYNONYMS - a 12-hydroxy epi-jasmonic acid // UNIQUE-ID - CPD-11256 TYPES - Jasmonates COMMON-NAME - an 11-hydroxyjasmonate sulfate COMMENT - This compound has not been detected in plants, but, its precursor, |FRAME: 11-Hydroxyjasmonates| does exist in /Arabidopsis thaliana and many other plant species |CITS:[17995915][18400744]|. If this /compound does exist, at least two different stereoisomeric forms may be found in plants. / If it is functionally similar to |FRAME: 12-Hydroxyjasmonate-Sulfates|, then this compound may not be biologically active. /Unlike methyl JA, |FRAME: 12-Hydroxyjasmonate-Sulfates "12-hydroxyjasmonate"| does not inhibit germination or /root growth in tomato seedlings |CITS:[17995915]|. SYNONYMS - an 11-OHJA sulfate SYNONYMS - an 11-hydroxyjasmonic acid sulfate SYNONYMS - an 11-SO4-hydroxy-JA SYNONYMS - an 11-hydroxy-JA-sulfate // UNIQUE-ID - Jasmonic-Acids TYPES - Jasmonates COMMON-NAME - a jasmonic acid COMMENT - Jasmonic acid is an important phytohormone. Four different stereoisomers of this compound exist, based on the /bond orientation at positions 3 and 7 on the cyclopentone ring. This compound represents the general structure for all four /forms. / /Only two of the stereoisomers occur naturally: /|FRAME: CPD-731| and |FRAME: CPD-734| |CITS: [8074303][19349968]|. These two forms are present in equilibrium /within cells and can interconvert spontaneously through epimerization |CITS: [8074303][19349968]|. The exact ratio of these stereoisomers /within a cell has not been conclusively determined, and it may vary based on species, cell type, and physiological state. But, /in the systems tested so far, |FRAME: CPD-734| is found at higher levels than |FRAME: CPD-731| |CITS:[19349968]|. / /The biological activity of these stereoisomers can be quite different |CITS: [8074303]|. In addition, enzymes involved in JA /metabolism may have different preferences for the different stereoisomers |CITS: [17291501]|. SYNONYMS - a jasmonate SYNONYMS - a JA // UNIQUE-ID - Jasmonoyl-ACCs TYPES - Jasmonates COMMON-NAME - a jasmonoyl-1-aminocyclopropane-1 carboxylate COMMENT - Jasmonyl-1-aminocyclopropane-1 carboxylic acid (JA-ACC) has been detected in Arabidopsis thaliana |CITS: [15258265]|. /The biological significance of this compound remains unknown. High levels of JA-ACC can affect root elongation in /Arabidopsis thaliana |CITS: [15258265]|. This appears to depend on a functional ethylene signaling pathway, but it does not require /the COI1 JA-signaling component |CITS: [15258265]|. Treatment of the Japanese weed, Polygonum longisetum, /with exogenous JA-ACC, increases sesquiterpene production in the leaves |CITS: [TAMOGAMI07]|. SYNONYMS - a jasmonyl-1-aminocyclopropane-1 carboxylic acid SYNONYMS - a JA-ACC SYNONYMS - a jasmonate-ACC SYNONYMS - a jasmonic acid ACC conjugate SYNONYMS - a jasmonyl-1-aminocyclopropanecarboxylate SYNONYMS - a jasmonyl-1-aminocyclopropane-1 carboxylate // UNIQUE-ID - Jasmonoyl-Glutamines TYPES - Jasmonates COMMON-NAME - a jasmonoyl-glutamine COMMENT - This compound can be detected in the leaves of |FRAME: TAX-49451| plants after they have been treated with oral secretions /of the herbivorus tobacco hornworm (|FRAME:TAX-7130|) |CITS:[17273867]|. It is likely that at least two steroisomers of this /compound exist. The biological activity of these isomers has not been assessed. SYNONYMS - a JA-Gln SYNONYMS - a jasmonate-glutamine SYNONYMS - a jasmonic acid-glutamine SYNONYMS - a jasmonic acid-glutamine conjugate SYNONYMS - a jasmonyl-glutamine // UNIQUE-ID - Jasmonoyl-Isoleucines TYPES - Jasmonates COMMON-NAME - a jasmonoyl-isoleucine COMMENT - Jasmonoyl-isoleucine (JA-Ile) has been detected in Arabidopsis thaliana |CITS: [15258265]| and a number of other plant /species |CITS: [18812165][SEMBDER93][17273867]|. There are two different naturally occurring stereoisomers of this /compound, |FRAME: CPD-11232| and |FRAME:CPD-11259|, that can spontaneously interconvert through epimerization /|CITS: [19349968]|. / /In Arabidopsis thaliana, JA-Ile promotes binding between the COI1 F-box protein and the JAZ1 repressor involved /in jasmonic acid-mediated signaling |CITS: [17637677]|. Therefore, JA-Ile promotes the degradation of JAZ1. /Initial studies suggested that |FRAME: CPD-11232 "(-)-JA-Ile"| was a biologically active phytohormone /|CITS: [SEMBDER93][17291501]|. However, /later work shows that |FRAME: CPD-11259| is the biologically active form of the compound |CITS: [19349968 /]|. This compound exists at low levels in most commercial preparations of |FRAME: CPD-11232| and may explain the observed /biological activity originally associated with |FRAME: CPD-11232 "(-)-JA-Ile"|. A pure preparation of that stereoisomer /does not promote JAZ/COI1 binding in vitro |CITS: [19349968]|. / /JA-Ile has also been detected in |FRAME: TAX-49451| and plays a role in defense responses |CITS: [17085687]| /but it is unclear which /form of JA-Ile is active in this process. / / SYNONYMS - a JA-Ile SYNONYMS - a jasmonate-isoleucine SYNONYMS - a jasmonic acid-isoleucine SYNONYMS - a jasmonic acid-isoleucine conjugate SYNONYMS - a jasmonyl isoleucine // UNIQUE-ID - Jasmonoyl-Leucines TYPES - Jasmonates COMMON-NAME - a jasmonoyl-leucine COMMENT - Jasmonoyl-leucine (JA-Leu) has been detected in Arabidopsis thaliana |CITS: [15258265]| and a number of other plant /species |CITS: [SEMBDER93][17273867]|. Two stereoisomers /of this compound may exist in plants. |FRAME: CPD-11234| is one naturally occurring form /of the compound |CITS: [19349968]|. / /JA-Leu may not be a biologically active form of the hormone in all species. It does not appear to function in herbivory /defense responses in |FRAME: TAX-49451| |CITS: [18065562]|. The |FRAME: CPD-11234| isomer also does not affect seedling root /growth in Arabidopsis thaliana nor does it promote JAZ/COI1 interactions in vitro|CITS: [19349968]|. /However, JA-Leu can elicit phytoalexin production in rice |CITS:[9013895]|. SYNONYMS - a JA-Leu SYNONYMS - a jasmonate-leucine SYNONYMS - a jasmonic acid-leucine SYNONYMS - a jasmonic acid-leucine conjugate SYNONYMS - a jasmonyl-leucine // UNIQUE-ID - Jasmonoyl-Phenylalanines TYPES - Jasmonates COMMON-NAME - a jasmonoyl-phenylalanine COMMENT - Jasmonoyl-phenylalanine (JA-Phe) has been detected in Arabidopsis thaliana |CITS: [15258265]|. Two stereoisomers /of this compound may exist in plants. |FRAME: CPD-11235| is one naturally occurring form of the compound |CITS: [19349968]|. / /JA-Phe may not be a biologically active form of the hormone in all species |CITS: [18812165 /]|. Unlike JA-Ile, JA-Phe does not promote interaction between the /JAZ1/JAZ3 and COI1 proteins from tomato in vitro |CITS: [18458331]| /nor does it seem to play a role in Arabidopsis thaliana wound responses |CITS: [18247047]|. /However, it can elicit phytoalexin production in rice |CITS:[9013895]|. SYNONYMS - a phenylalanine-jasmonate conjugate SYNONYMS - a JA-Phe SYNONYMS - a jasmonate-phenylalanine SYNONYMS - a jasmonic acid-phenylalanine SYNONYMS - a jasmonic acid-phenylalanine conjugate SYNONYMS - a jasmonyl-phenylalanine // UNIQUE-ID - Jasmonoyl-Valines TYPES - Jasmonates COMMON-NAME - a jasmonoyl-valine COMMENT - Jasmonoyl-valine (JA-Val) has been detected in Arabidopsis thaliana |CITS: [15258265]| and a number of other plant /species |CITS: [SEMBDER93][17273867]|. Two stereoisomers /of this compound may exist in plants. |FRAME: CPD-11233| is one naturally occurring form /of the compound |CITS: [19349968]|. / /JA-Val may not be a biologically active form of the hormone in some species. It does not appear to function in herbivory /defense responses in |FRAME: TAX-49451| |CITS: [18065562]|. The |FRAME: CPD-11233| isomer also does not affect /seedling root growth in /Arabidopsis thaliana nor does it promote JAZ/COI1 interactions in vitro|CITS: [19349968]|. / SYNONYMS - a jasmonate-valine SYNONYMS - a jasmonic acid-valine SYNONYMS - a jasmonic acid-valine conjugate SYNONYMS - a jasmonyl-valine SYNONYMS - a JA-Val // UNIQUE-ID - Methyl-Jasmonates TYPES - Jasmonates COMMON-NAME - a methyl jasmonate COMMENT - Methyl Jasmonic Acid (MeJA) is a volatile compound that may be responsible for airborne signals that mediate interplant communication for defense responses |CITS: [11607107]| . SYNONYMS - a jasmonic acid methyl ester SYNONYMS - a jasmonate methyl ester SYNONYMS - an MeJA // UNIQUE-ID - Polyphosphates TYPES - Phosphates COMMON-NAME - a polyphosphate SYNONYMS - linear polyphosphates // UNIQUE-ID - CPD1G-1530 TYPES - FATTY-ACIDS-AND-CONJUGATES COMMON-NAME - an arabinogalactan COMMENT - Arabinogalactan is a biopolymer consisting of arabinose and galactose monosaccharides in their furanose configurations /and is a major structural component of the mycobacterial cell wall, where it is covalently attached to the peptidoglycan. / /The galactan portion of the polymer is linear, consisting of approximately 30 units with alternating β-(1-5) and /β-(1-6) glycosidic linkages. / /Arabinan chains are attached at three branch points within the galactan chain (believed to be at residues 8, 10 and 12) /|CITS: [16040600]|. These chains consist of about 30 residues |CITS: [18303028]|. /]. / /The arabinan portion of the polymer is a complex branched structure with glycosidic linkages of α-(1-3), /β-(1-5), and β-(1-2). / /In the Mycobacterial cell wall, the arabinan portion is usually capped with mycolic acids. // UNIQUE-ID - MYCOLIC-ACIDS TYPES - FATTY-ACIDS-AND-CONJUGATES COMMON-NAME - a mycolic acid // UNIQUE-ID - VERY-LONG-CHAIN-FATTY-ACYL-AMPs TYPES - FATTY-ACIDS-AND-CONJUGATES COMMON-NAME - a very long chain fatty-acyl AMP // UNIQUE-ID - 1-Alkenyl-2-acyl-glyceroPethamines TYPES - Ether-linked-phospholipids COMMON-NAME - a 1-alkenyl-2-acylglycerophosphoethanolamine // UNIQUE-ID - 1-Alkenylglycerophosphoethanolamines TYPES - Ether-linked-phospholipids COMMON-NAME - a 1-alkenylglycerophosphoethanolamine // UNIQUE-ID - 1-Alkyl-sn-glycero-3-phosphocholines TYPES - Ether-linked-phospholipids COMMON-NAME - a 1-alkyl-sn-glycero-3-phosphocholine // UNIQUE-ID - 1-Alkyl-sn-glycerol-3-phosphates TYPES - Ether-linked-phospholipids COMMON-NAME - a 1-alkyl-sn-glycerol-3-phosphate // UNIQUE-ID - Alkyl-acetyl-glycero-phosphocholines TYPES - Ether-linked-phospholipids COMMON-NAME - a 1-alkyl-2-acetyl-sn-glycero-3-phosphocholine SYNONYMS - a 2-acetyl-1-alkyl-sn-glycero-3-phosphocholine // UNIQUE-ID - Alkyl-acyl-gly-P-EtOH-amines TYPES - Ether-linked-phospholipids COMMON-NAME - an O-1-alkyl-2-acyl-sn-glycero-3-phosphoethanolamine // UNIQUE-ID - Alkyl-enyl-acyl-gly-P-EtOH-amines TYPES - Ether-linked-phospholipids COMMON-NAME - an O-1-alk-1-enyl-2-acyl-sn-glycero-3-phosphoethanolamine // UNIQUE-ID - Organyl-acyl-glycero-phosphocholines TYPES - Ether-linked-phospholipids COMMON-NAME - a 1-organyl-2-acyl-sn-glycero-3-phosphocholine SYNONYMS - a 2-acyl-1-alkyl-sn-glycero-3-phosphocholine SYNONYMS - a 1-radyl-2-acyl-sn-glycero-3-phosphocholine // UNIQUE-ID - 1-Acylglycero-Phosphocholines TYPES - Lysophospholipids COMMON-NAME - a 1-acyl-2-lyso-glycerophosphocholine COMMENT - Lysolecithins, or acyl-sn-glycero-3-phosphocholines, are derivatives of phosphatidylcholine, resulting /from hydrolytic removal of one of the two acyl groups. /The instances of this class include different variations based on the specific acyl group which has been removed. / /The structure below is an example of such an instance. SYNONYMS - a lyso-phosphatidylcholine SYNONYMS - a lysolecithin SYNONYMS - a 2-lysolecithin SYNONYMS - a 1-acyl-2-lyso-phosphatidylcholine SYNONYMS - an α'-acylglycerophosphocholine SYNONYMS - an L-2-lysolecithin SYNONYMS - a 1-acylglycerophosphocholine // UNIQUE-ID - 1-Lysophosphatidates TYPES - Lysophospholipids COMMON-NAME - a 1-lysophosphatidate SYNONYMS - a 2-acyl-sn-glycerol 3-phosphate SYNONYMS - a 2-acyl-sn-glycerol 3P // UNIQUE-ID - 1-Lysophosphatidylglycerols TYPES - Lysophospholipids COMMON-NAME - a 2-acyl-1-lyso-phosphatidylglycerol // UNIQUE-ID - 2-ACYL-GPE TYPES - Lysophospholipids COMMON-NAME - a 1-lyso-2-acyl-sn-glycero-3-phosphoethanolamine SYNONYMS - 2-acyl-GPE SYNONYMS - O-(2-acyl-sn-glycero-3-phospho)-ethanolamine SYNONYMS - 1-lysophosphatidylethanolamine SYNONYMS - a 2-acyl-sn-glycero-3-phosphoethanolamine // UNIQUE-ID - 2-Acylglycero-Phosphocholines TYPES - Lysophospholipids COMMON-NAME - a 1-lyso-2-acyl-sn-glycero-3-phosphocholine SYNONYMS - a L-1-lysolecithin SYNONYMS - a 1-lysophosphatidylcholine SYNONYMS - a 1-lysolecithin SYNONYMS - a β-lysophosphatidylcholine SYNONYMS - a 2-acylglycerophosphocholine SYNONYMS - a 2-acyl-sn-glycero-3-phosphocholine // UNIQUE-ID - 2-Lysophosphatidylcholines TYPES - Lysophospholipids COMMON-NAME - a 2-lysophosphatidylcholine SYNONYMS - a 1-acyl-sn-glycero-3-phosphocholine SYNONYMS - a 1-acylglycero-3-phosphocholine SYNONYMS - a 1-acyl-sn-glycerol-3-phosphocholine // UNIQUE-ID - 2-LYSOPHOSPHATIDYLETHANOLAMINES TYPES - Lysophospholipids COMMON-NAME - a 2-lyso-phosphatidyl-ethanolamine SYNONYMS - L-2-lyso-phosphatidyl-ethanolamine // UNIQUE-ID - 2-Lysophosphatidylglycerols TYPES - Lysophospholipids COMMON-NAME - a 1-acyl-2-lyso-phosphatidylglycerol // UNIQUE-ID - ACYL-SN-GLYCEROL-3P TYPES - Lysophospholipids COMMON-NAME - a 1-acyl-sn-glycerol-3-phosphate SYNONYMS - a 2-lysophosphatidate SYNONYMS - an acyl-sn-glycerol-3P SYNONYMS - an acyl-sn-glycerol-3-phosphate // UNIQUE-ID - L-1-PHOSPHATIDYL-ETHANOLAMINE TYPES - Phosphoglycerides COMMON-NAME - an L-1-phosphatidyl-ethanolamine SYNONYMS - glycerophosphoethanolamine SYNONYMS - Phosphatidylethanolamine (ecoli) SYNONYMS - O-(1-β-acyl-2-acyl-sn-glycero-3-phospho)-ethanolamine SYNONYMS - phosphatidylethanolamine SYNONYMS - 1-phosphatidylethanolamine SYNONYMS - L-1-phosphotidylethanolamine SYNONYMS - a phosphatidylethenolamine SYNONYMS - O-(1-β-acyl-2-acyl-sn-glycero-3-phospho)-ethanolamine SYNONYMS - PtdEtn SYNONYMS - a 1-phosphatidylethanolamine SYNONYMS - an L-1-phosphotidylethanolamine // UNIQUE-ID - L-1-PHOSPHATIDYL-GLYCEROL TYPES - Phosphoglycerides COMMON-NAME - an L-1-phosphatidyl-glycerol SYNONYMS - 3-(3-sn-phosphatidyl)glycerol SYNONYMS - 3(3-phosphatidyl-)glycerol SYNONYMS - 1-phosphatidylglycerol SYNONYMS - phosphatidylglycerol // UNIQUE-ID - L-1-PHOSPHATIDYL-GLYCEROL-P TYPES - Phosphoglycerides COMMON-NAME - an L-1-phosphatidylglycerol-phosphate SYNONYMS - Phosphatidylglycerophosphate (Ecoli) SYNONYMS - 3-(3-phosphatidyl)-glycerol-1-phosphate SYNONYMS - phosphatidyl-glycerol-phosphate SYNONYMS - 3-(3-phosphatidyl)-sn-glycerol-1-phosphate SYNONYMS - (3-sn-phosphatidyl)-sn-glycerol-1-phosphate SYNONYMS - phosphatidylglycerophosphate SYNONYMS - 1-phosphatidyl-glycerol-P SYNONYMS - L-1-phosphatidylglycerol-P SYNONYMS - 3(3-sn-Phosphatidyl)-sn-glycerol 1-phosphate SYNONYMS - 3(3-Phosphatidyl-)L-glycerol 1-phosphate // UNIQUE-ID - L-PHOSPHATIDATE TYPES - Phosphoglycerides COMMON-NAME - a 1,2-diacylglycerol-3-phosphate COMMENT - Phosphatidates consist of a glycerol backbone, with a (usually) saturated fatty acid bonded to carbon-1, /a (usually) unsaturated fatty acid bonded to carbon-2, and a phosphate group bonded to carbon-3. SYNONYMS - DGP SYNONYMS - diacylglycerol phosphate SYNONYMS - a 3-sn-phosphatidate SYNONYMS - a diacyl-glycerol-3p SYNONYMS - a diacyl-glycerol-p SYNONYMS - a diacylglycerol-3-phosphate SYNONYMS - a phosphatidic acid SYNONYMS - an L-phosphatidate SYNONYMS - a phosphatidate SYNONYMS - a 1,2-diacylglycerol-3-phosphate SYNONYMS - a phosphatidylglycerol // UNIQUE-ID - PHOSPHATIDYLCHOLINE TYPES - Phosphoglycerides COMMON-NAME - a phosphatidylcholine COMMENT - There are two variations of the molecular structure, and we've illustrated only one here. /Either an end carbon or a middle carbon of the glycerol is attached to the phosphocholine, /and each of the remaining two carbons of the glycerol is attached to a fatty acid. / SYNONYMS - acyl-glycerophosphocholine SYNONYMS - a choline phosphatide SYNONYMS - a 1,2-diacyl-sn-glycero-3-phosphocholine SYNONYMS - a phosphatidyl-N-trimethylethanolamine SYNONYMS - a lecithin SYNONYMS - 3-sn-phosphatidylcholine // UNIQUE-ID - CiS-POLYISOPRENYL-PP TYPES - Polyisoprenyl-Diphosphates COMMON-NAME - an all-cis polyisoprenyl diphosphate COMMENT - For polyisoprenols and polyisoprenyl phosphates nomenclature, see |FRAME: Polyisoprenoids|. // UNIQUE-ID - CIS-TRANS-POLYISOPRENYL-PP TYPES - Polyisoprenyl-Diphosphates COMMON-NAME - a cis,trans-polyisoprenyl diphosphate COMMENT - For polyisoprenols and polyisoprenyl phosphates nomenclature, see |FRAME: Polyisoprenoids|. SYNONYMS - a cis,trans-polyisoprenyln-PP // UNIQUE-ID - TRANS-POLYISOPRENYL-PP TYPES - Polyisoprenyl-Diphosphates COMMON-NAME - an all-trans-polyisoprenyl diphosphate COMMENT - For polyisoprenols and polyisoprenyl phosphates nomenclature, see |FRAME: Polyisoprenoids|. SYNONYMS - a trans-polyisoprenyln-PP // UNIQUE-ID - Glucosyl-Ceramides TYPES - Ceramides SYNONYMS - a glucosylceramide // UNIQUE-ID - Inositolphosphoryl-Ceramides TYPES - Ceramides SYNONYMS - an inositolphosphorylceramide // UNIQUE-ID - Lactosyl-Ceramides TYPES - Ceramides COMMON-NAME - a lactosylceramide // UNIQUE-ID - Phytoceramides TYPES - Ceramides COMMON-NAME - a phytoceramide // UNIQUE-ID - Plant-Ceramide-Phosphate TYPES - Ceramides SYNONYMS - a plant ceramide 1-phosphate // UNIQUE-ID - Plant-Ceramides-I TYPES - Ceramides COMMON-NAME - a plant ceramide (I) COMMENT - The predominant long-chain base in animal ceramides is sphingosine, which is only present in trace amount in plant ceramides. /In contrast, sphinganine, 4-hydroxysphinganine, and 4-hydroxy-8-sphingenine are the prevalent long-chain bases in plants. The acyl chain of plant ceramides contains alpha-hydroxylated very long chain fatty acids. / /The plant ceramide (I) in MetaCyc represents plant ceramides with sphinganine as the long-chain base. // UNIQUE-ID - Plant-Ceramides-II TYPES - Ceramides COMMENT - The predominant long-chain base in animal ceramides is sphingosine, which is only present in trace amount in plant ceramides. /In contrast, sphinganine, 4-hydroxysphinganine, and 4-hydroxy-8-sphingenine are the prevalent long-chain bases in plants. The acyl chain of plant ceramides contains alpha-hydroxylated very long chain fatty acids. / /The plant ceramide (II) in MetaCyc represents plant ceramides which has sphinganine as the long-chain base and with an alpha-hydroxylated fatty acyl chain. SYNONYMS - a plant ceramide (II) // UNIQUE-ID - Plant-Ceramides-III TYPES - Ceramides COMMENT - The predominant long-chain base in animal ceramides is sphingosine, which is only present in trace amount in plant ceramides. /In contrast, sphinganine, 4-hydroxysphinganine, and 4-hydroxy-8-sphingenine are the prevalent long-chain bases in plants. The acyl chain of plant ceramides contains alpha-hydroxylated very long chain fatty acids. / /The plant ceramide (III) in MetaCyc represents plant ceramides with 4-hydroxysphinganine as the long-chain base. SYNONYMS - a plant ceramide (III) // UNIQUE-ID - Plant-Ceramides-IV TYPES - Ceramides COMMENT - The predominant long-chain base in animal ceramides is sphingosine, which is only present in trace amount in plant ceramides. /In contrast, sphinganine, 4-hydroxysphinganine, and 4-hydroxy-8-sphingenine are the prevalent long-chain bases in plants. The acyl chain of plant ceramides contains alpha-hydroxylated very long chain fatty acids. / /The plant ceramide (IV) in MetaCyc represents plant ceramides with 4-hydroxy-8-sphingenine as the long-chain base. SYNONYMS - a plant ceramide (IV) // UNIQUE-ID - Plant-ceramides-V TYPES - Ceramides COMMON-NAME - a plant ceramide (V) COMMENT - The predominant long-chain base in animal ceramides is sphingosine, which is only present in trace amount in plant ceramides. /In contrast, sphinganine, 4-hydroxysphinganine, and 4-hydroxy-8-sphingenine are the prevalent long-chain bases in plants. The acyl chain of plant ceramides contains alpha-hydroxylated very long chain fatty acids. / /The plant ceramide (V) in MetaCyc represents plant ceramides which has 4-hydroxysphinganine as the long-chain base and with an alpha-hydroxylated fatty acyl chain. / // UNIQUE-ID - 2-hydroxyacyl-glutathiones TYPES - Hydroxyacyl-glutathiones COMMON-NAME - S-(2-hydroxyacyl)glutathione // UNIQUE-ID - Alkanesulfonates TYPES - Aliphatic-Sulfonates COMMON-NAME - an alkanesulfonate COMMENT - This compound class stands for generic and unspecified alkanesulfonate compounds. SYNONYMS - an alkanesulfonate SYNONYMS - alkanesulfonate SYNONYMS - alkylsulfonate // UNIQUE-ID - A-GLUCOSYLOXYANTHRAQUINONE TYPES - Quinones COMMON-NAME - a glucosyloxyanthraquinone // UNIQUE-ID - Demethylmenaquinones TYPES - Quinones COMMON-NAME - a demethylmenaquinone COMMENT - Menaquinols are the reduced form of |FRAME: Menaquinones "menaquinones"|. / /Menaquinones and demethylmenaquinones are isoprenoid quinones of the naphthalene series, and are constituents of /bacterial plasma membranes, where they play important roles in electron transfer and oxidative phosphorylation. /Menaquinones and demethylmenaquinones are named MK-n or DMK-n, respectively, where the n /refers to the number of prenyl units present in the side chain. /The most common length of the side chain in bacteria is 8, although minor amounts of MK-1 through /MK-14 have been found |CITS: [7022156]|. / /Menaquinones are also known as vitamin K2. Vitamin K is a name given to a group of derivatives of 2-methyl-1,4-naphthoquinone that are required by mammals for the posttranslational modification of certain proteins, mostly involved in blood coagulation. These compounds, while essential for mammals, are not synthesized by them, and are thus considered vitamins. / /The natural forms of the vitamin are vitamin K1 (|FRAME: 2-METHYL-3-PHYTYL-14-NAPHTHOQUINONE|) and vitamin K2 (|FRAME: Menaquinones "menaquinone"|). Since menaquinones produced by different organisms have different tail lenghts there are many variations of vitamin K2, usually specified based on the number of carbons in their tails, such as in Vitamin K2(45). // UNIQUE-ID - Hydroxyanthraquinones TYPES - Quinones COMMON-NAME - a hydroxyanthraquinone // UNIQUE-ID - PLASTOQUINONE TYPES - Quinones COMMON-NAME - a plastoquinone COMMENT - Plastoquinones (PQ) are quinones found in chloroplasts, algae and cyanobacteria, and are important /members of the photosynthetic electron transfer chain. / /Plastoquinones carry the electrons from |FRAME: CPLX490-3506| to the |FRAME: CPLX490-29|. /They are analogs of |FRAME: Ubiquinones "ubiquinones"| (Coenzyme Q), with two methyl groups substituting the methoxy groups found in Q. Plastoquinone can function as acceptor/donor for one or two electrons. The fully reduced form is called |FRAME: PLASTOQUINOL-1|. // UNIQUE-ID - Semiquinones TYPES - Quinones COMMON-NAME - a semiquinone COMMENT - A semiquinone is a free radical resulting from the removal of one hydrogen atom with its electron during the process of dehydrogenation of |FRAME: Reduced-Quinones| to |FRAME: Quinones| or, alternatively, the addition of a single hydrogen atom to |FRAME: Quinones|. SYNONYMS - semiquinone // UNIQUE-ID - Ubiquinones TYPES - Quinones COMMON-NAME - a ubiquinone COMMENT - The ubiquinones are a group of lipid-soluble benzoquinones involved in electron transport. Their structures /have a variable length side chain, which consists of one to twelve mono-unsaturated /trans-isoprenoids units, with ten units being the most common in animals. /|FRAME: TAX-559292| has 6 units, |FRAME: TAX-71421| has 7, |FRAME: TAX-83333| has 8, |FRAME: TAX-1142| /has 9, |FRAME: TAX-9606| has 10, and |FRAME: TAX-1270| has an 11 unit form |CITS: [16233343]|. / /The terms ubiquinone/ubiquinol refer to the oxidized/reduced forms, and are often used interchangeably. /The forms are readily interconvertable. / /Ubiquinone is also known as coenzyme Q, or just Q. The names are often followed by the number of the prenoid units in the side chain (e.g. Q-8), or the number of carbons in the chain. For example, the name Q-8 may be substituted with ubiiquinone(40). Since these carbons occur in repeating units of five, these number are multiples of 5. SYNONYMS - ubiquinones SYNONYMS - coenzyme-Qn SYNONYMS - ubiquinone SYNONYMS - Q // UNIQUE-ID - Unknown-Quinones TYPES - Quinones COMMON-NAME - an unknown quinone COMMENT - A placeholder for when the exact species of membrane-bound quinone is not yet known. // UNIQUE-ID - Dihidromenaquinones TYPES - Menaquinones COMMON-NAME - a dihidromenaquinone // UNIQUE-ID - Demethylmenaquinols TYPES - Reduced-Quinones COMMON-NAME - a demethylmenaquinol COMMENT - Menaquinols are the reduced form of |FRAME: Menaquinones "menaquinones"|. / /Menaquinones and demethylmenaquinones are isoprenoid quinones of the naphthalene series, and are constituents of /bacterial plasma membranes, where they play important roles in electron transfer and oxidative phosphorylation. /Menaquinones and demethylmenaquinones are named MK-n or DMK-n, respectively, where the n /refers to the number of prenyl units present in the side chain. /The most common length of the side chain in bacteria is 8, although minor amounts of MK-1 through /MK-14 have been found |CITS: [7022156]|. / /Menaquinones are also known as vitamin K2. Vitamin K is a name given to a group of derivatives of 2-methyl-1,4-naphthoquinone that are required by mammals for the posttranslational modification of certain proteins, mostly involved in blood coagulation. These compounds, while essential for mammals, are not synthesized by them, and are thus considered vitamins. / /The natural forms of the vitamin are vitamin K1 (|FRAME: 2-METHYL-3-PHYTYL-14-NAPHTHOQUINONE|) and vitamin K2 (|FRAME: Menaquinones "menaquinone"|). Since menaquinones produced by different organisms have different tail lenghts there are many variations of vitamin K2, usually specified based on the number of carbons in their tails, such as in Vitamin K2(45). // UNIQUE-ID - Menaquinols TYPES - Reduced-Quinones COMMON-NAME - a menaquinol COMMENT - Menaquinols are the reduced form of |FRAME: Menaquinones "menaquinones"|. / /Menaquinones and demethylmenaquinones are isoprenoid quinones of the naphthalene series, and are constituents of /bacterial plasma membranes, where they play important roles in electron transfer and oxidative phosphorylation. /Menaquinones and demethylmenaquinones are named MK-n or DMK-n, respectively, where the n /refers to the number of prenyl units present in the side chain. /The most common length of the side chain in bacteria is 8, although minor amounts of MK-1 through /MK-14 have been found |CITS: [7022156]|. / /Menaquinones are also known as vitamin K2. Vitamin K is a name given to a group of derivatives of 2-methyl-1,4-naphthoquinone that are required by mammals for the posttranslational modification of certain proteins, mostly involved in blood coagulation. These compounds, while essential for mammals, are not synthesized by them, and are thus considered vitamins. / /The natural forms of the vitamin are vitamin K1 (|FRAME: 2-METHYL-3-PHYTYL-14-NAPHTHOQUINONE|) and vitamin K2 (|FRAME: Menaquinones "menaquinone"|). Since menaquinones produced by different organisms have different tail lenghts there are many variations of vitamin K2, usually specified based on the number of carbons in their tails, such as in Vitamin K2(45). // UNIQUE-ID - PLASTOQUINOL-1 TYPES - Reduced-Quinones COMMON-NAME - a plastoquinol COMMENT - |FRAME: PLASTOQUINONE "Plastoquinones"| (PQ) are quinones found in chloroplasts, algae and cyanobacteria, and are important /members of the photosynthetic electron transfer chain. / /Plastoquinones carry the electrons from |FRAME: CPLX490-3506| to the |FRAME: CPLX490-29|. /They are analogs of |FRAME: Ubiquinones "ubiquinones"| (Coenzyme Q), with two methyl groups substituting the methoxy groups found in Q. Plastoquinone can function as acceptor/donor for one or two electrons. The fully reduced form is called |FRAME: PLASTOQUINOL-1|. // UNIQUE-ID - Ubiquinols TYPES - Reduced-Quinones COMMON-NAME - a ubiquinol COMMENT - The ubiquinones are a group of lipid-soluble benzoquinones involved in electron transport. Their structures /have a variable length side chain, which consists of one to twelve mono-unsaturated /trans-isoprenoids units, with ten units being the most common in animals. /|FRAME: TAX-559292| has 6 units, |FRAME: TAX-71421| has 7, |FRAME: TAX-83333| has 8, |FRAME: TAX-1142| /has 9, |FRAME: TAX-9606| has 10, and |FRAME: TAX-1270| has an 11 unit form |CITS: [16233343]|. / /The terms ubiquinone/ubiquinol refer to the oxidized/reduced forms, and are often used interchangeably. /The forms are readily interconvertable. / /Ubiquinone is also known as coenzyme Q, or just Q. The names are often followed by the number of the prenoid units in the side chain (e.g. Q-8), or the number of carbons in the chain. For example, the name Q-8 may be substituted with ubiiquinone(40). Since these carbons occur in repeating units of five, these number are multiples of 5. SYNONYMS - a dihydroubiquinone SYNONYMS - a reduced ubiquinone SYNONYMS - a QH2 // UNIQUE-ID - Unknown-Quinols TYPES - Reduced-Quinones COMMENT - A placeholder for when the exact species of membrane-bound quinol is not yet known. // UNIQUE-ID - Anthocyanidin-3-O-beta-D-glucosides TYPES - Anthocyanidins COMMON-NAME - an anthocyanidin-3-O-β-D-glucoside // UNIQUE-ID - ANTHOCYANIDIN-3-O-D-GLUCOSIDE TYPES - Anthocyanidins COMMON-NAME - an anthocyanidin-3-O-D-glucoside // UNIQUE-ID - Anthocyanidin-malonyl-beta-D-glucosides TYPES - Anthocyanidins COMMON-NAME - an anthocyanidin-3-O-(6-O-malonyl-β-D-glucoside) // UNIQUE-ID - Anthocyanin-3-O-beta-D-glucosides TYPES - Anthocyanins COMMON-NAME - an anthocyanin 3'-O-β-D glucoside // UNIQUE-ID - Cyanidin-3-O-rutinosides TYPES - Anthocyanins COMMON-NAME - a cyanidin-3-O-rutinoside // UNIQUE-ID - Cyanidin-rutinoside-glucosides TYPES - Anthocyanins COMMON-NAME - a cyanidin-3-O-rutinosie-5-O-β-D-glucoside // UNIQUE-ID - PRENYLCHALCONES TYPES - Chalcones COMMON-NAME - a prenylchalcone SYNONYMS - a prenylflavonoid SYNONYMS - a prenylated chalcone // UNIQUE-ID - Dihydroquercetins TYPES - Dihydroflavonols COMMON-NAME - a dihydroquercetin SYNONYMS - a cis or trans dihydroquercetin // UNIQUE-ID - CPD-10359 TYPES - Flavan-3-ols COMMON-NAME - a 2,3-trans-flavan-3-ol SYNONYMS - flavan-3-ols // UNIQUE-ID - CPD-10414 TYPES - Flavan-3-ols COMMON-NAME - a 2,3-cis-flavan-3-ol // UNIQUE-ID - PA-N TYPES - Flavan-3-ols COMMON-NAME - a proanthocyanidin // UNIQUE-ID - FLAVANONE-7-O-GLUCOSIDES TYPES - FLAVANONES COMMON-NAME - a flavanone-7-O-β-D-glucoside // UNIQUE-ID - Flavonone-rhamnosyl-glucosides TYPES - FLAVANONES COMMON-NAME - a flavanone 7-O-(β-L-rhamnosyl-(1,2)-β-D-glucoside // UNIQUE-ID - Hydroxyflavonones TYPES - FLAVANONES COMMON-NAME - a hydroxyflavonone // UNIQUE-ID - PRENYLFLAVANONES TYPES - FLAVANONES COMMON-NAME - a prenylflavanone SYNONYMS - a prenylated flavanone SYNONYMS - a prenylflavonoid // UNIQUE-ID - CPD-520 TYPES - Flavonols COMMON-NAME - a quercetin SYNONYMS - quercetin SYNONYMS - 3,5,7,3',4'-pentahydroflavone SYNONYMS - 3,5,7,3',4'-pentahydroxyflavone // UNIQUE-ID - Flavonol-Derivatives TYPES - Flavonols COMMON-NAME - a flavonol derivative // UNIQUE-ID - 7-hydroxyisoflavones TYPES - Isoflavones COMMON-NAME - a 7-hydroxyisoflavone // UNIQUE-ID - 7-methoxyisoflavones TYPES - Isoflavones COMMON-NAME - a 7-methoxyisoflavone // UNIQUE-ID - Isoflavone-7-O-B-D-glucosides TYPES - Isoflavones COMMON-NAME - an isoflavone-7-O-β-D-glucoside SYNONYMS - Isoflavone-7-O-β-D-glucosides // UNIQUE-ID - 5-Hydroxyfurocoumarins TYPES - Coumarins COMMON-NAME - a 5-hydroxyfurocoumarin // UNIQUE-ID - 5-Methoxyfurocoumarins TYPES - Coumarins COMMON-NAME - a 5- methoxyfurocoumarin // UNIQUE-ID - 1-Hydroxy-2-oxolimonenes TYPES - Monoterpenes COMMON-NAME - a 1-hydroxy-2-oxolimonene SYNONYMS - a 1-hydroxymenth-8-en-2-one // UNIQUE-ID - Carvones TYPES - Monoterpenes COMMON-NAME - a carvone SYNONYMS - 2-methyl-5-(prop-1-en-2-yl)cyclohex-2-en-1-one // UNIQUE-ID - Limonene-1-2-diols TYPES - Monoterpenes COMMON-NAME - a limonene-1,2-diol // UNIQUE-ID - Limonene-1-2-epoxides TYPES - Monoterpenes COMMON-NAME - a limonene-1,2-epoxide SYNONYMS - a 1,2-epoxymenth-8-ene // UNIQUE-ID - Limonenes TYPES - Monoterpenes COMMON-NAME - a limonene // UNIQUE-ID - Menthones TYPES - Monoterpenes COMMON-NAME - a menthone // UNIQUE-ID - PINENE TYPES - Monoterpenes COMMON-NAME - pinene SYNONYMS - α-pinene // UNIQUE-ID - Monoterpene-Derivatives TYPES - Terpenoid-Derivatives COMMON-NAME - a monoterpenoid derivative // UNIQUE-ID - Sesquiterpenoid-Derivatives TYPES - Terpenoid-Derivatives COMMON-NAME - a sesquiterpenoid derivative // UNIQUE-ID - carotenoids TYPES - Tetraterpenes COMMON-NAME - a carotenoid // UNIQUE-ID - 23-24-Dihydrocucurbitacins TYPES - Triterpenes COMMON-NAME - a 23,24-dihydrocucurbitacin // UNIQUE-ID - Cucurbitacins TYPES - Triterpenes COMMON-NAME - a cucurbitacin // UNIQUE-ID - Desaturated-Thalian-diols TYPES - Triterpenes COMMON-NAME - a desaturated thalian-diol COMMENT - This compound has been identified in the root extracts of Arabidopsis thaliana |CITS: [18356490]|. /The exact position of the hydroxyl group present on this compound is unknown, but GC-MS /ionization data suggest that this group may be added to one of four carbons that are available in /rings B or C (shown as positions R, R1, R2, and R3 in this diagram) |CITS: [18356490]|. Thus, /the final chemical formula for desaturated thalian-diol is C30H48O2 with a calculated mass of 440.7. /The compound was initially referred to as (3S,13S,14R)-malabarica-8,15,17,21-tetraen-3,?-diol /|CITS: [18356490]|, but a more accurate name for the compound is /(13R,14R,17E)-podioda-8,15,17,21-tetraen-3beta,?-diol |CITS: [17474751]|. / SYNONYMS - (3S,13S,14R)-malabarica-8,15,17,21-tetraen-3,?-diol (obsolete) SYNONYMS - (13R,14R,17E)-podioda-8,15,17,21-tetraen-3beta,?-diol // UNIQUE-ID - Hederagenin-Monoglucosides TYPES - Triterpenes COMMON-NAME - a hederagenin monoglucoside // UNIQUE-ID - Medicagenate-Monoglucosides TYPES - Triterpenes COMMON-NAME - a medicagenate monoglucoside // UNIQUE-ID - Soyasapogenol-B-Monoglucosides TYPES - Triterpenes COMMON-NAME - a soyasapogenol B monoglucoside // UNIQUE-ID - Soyasapogenol-E-Monoglucosides TYPES - Triterpenes COMMON-NAME - a soyasapogenol E monoglucoside // UNIQUE-ID - Thalian-diols TYPES - Triterpenes COMMON-NAME - a thalian-diol COMMENT - This compound has been identified in the root extracts of Arabidopsis thaliana |CITS: [18356490]|. /The exact position of the hydroxyl group added by thalianol hydroxylase is unknown, but GC-MS /ionization data suggest that this group may be added to one of four carbons that are available in /rings B or C (shown as positions R, R1, R2, and R3 in this diagram) |CITS: [18356490]|. Thus, /the final chemical formula for thalian-diol is C30H50O2 with a calculated mass of 442.7168. /The compound was initially referred to as (3S,13S,14R)-malabarica-8,17,21-trien-3,?-diol /|CITS: [18356490]|, but a more accurate name for the compound is /(13R,14R,17E)-podioda-8,17,21-trien-3beta,?-diol |CITS: [17474751]|. / SYNONYMS - (3S,13S,14R)-malabarica-8,17,21-trien-3,?-diol (obsolete) SYNONYMS - (13R,14R,17E)-podioda-8,17,21-trien-3beta,?-diol // UNIQUE-ID - ALPHA-ACIDS TYPES - BITTER-ACIDS COMMON-NAME - an α-acid // UNIQUE-ID - BETA-ACIDS TYPES - BITTER-ACIDS COMMON-NAME - a β-acid // UNIQUE-ID - Aminoglycosides TYPES - Antibiotics COMMON-NAME - an aminoglycoside COMMENT - An aminoglycoside is a molecule composed of a sugar group and an amino group. Several aminoglycoside function as antibiotics that are used to treat certain bacterial infections. Anthracyclines are another group of aminoglycosides, which are used in chemotherapy. // UNIQUE-ID - Beta-Lactams TYPES - Antibiotics COMMON-NAME - a β-lactam COMMENT - This compound class stands for generic and unspecified β-lactam antibiotics, such as the penicillins and cephalosporins. // UNIQUE-ID - Deoxystreptamine-Antib TYPES - Antibiotics COMMON-NAME - a 2-deoxystreptamine antibiotic // UNIQUE-ID - Macrolide-Antibiotics TYPES - Antibiotics COMMON-NAME - a macrolide antibiotic COMMENT - This compound class stands for generic and unspecified macrolide antibiotics. SYNONYMS - a macrolide antibiotic SYNONYMS - macrolide antibiotic SYNONYMS - macrolide // UNIQUE-ID - Peptide-Antibiotics TYPES - Antibiotics COMMON-NAME - a peptide antibiotic COMMENT - This compound class stands for generic and unspecified peptide antibiotics. SYNONYMS - Peptide Antibiotic // UNIQUE-ID - 3-Oxo-5-Alpha-Steroids TYPES - 3-Oxosteroids COMMON-NAME - a 3-oxo-5-α-steroid // UNIQUE-ID - 3-Oxo-5-Beta-Steroids TYPES - 3-Oxosteroids COMMON-NAME - a 3-oxo-5-β-steroid // UNIQUE-ID - 3-oxo-D5-steroids TYPES - 3-Oxosteroids COMMON-NAME - a 3-oxo-δ5-steroid // UNIQUE-ID - 3-Oxo-Delta-1-Steroids TYPES - 3-Oxosteroids COMMON-NAME - a 3-oxo-D1-steroid // UNIQUE-ID - 3-Oxo-Delta-4-Steroids TYPES - 3-Oxosteroids COMMON-NAME - a 3-oxo-δ4-steroid // UNIQUE-ID - Reduced-nitrogen-reductases TYPES - Nitrogen-reductases COMMON-NAME - a reduced nitrogenase SYNONYMS - a dinitrogenase, reduced SYNONYMS - a nitrogenase, reduced SYNONYMS - a dinitrogen reductase, reduced // UNIQUE-ID - Reduced-nitrogenase-reductases TYPES - Nitrogenase-Reductases COMMON-NAME - a reduced nitrogenase-reductase // UNIQUE-ID - RUBISCO-LYSINE TYPES - MODIFIED-RUBISCO COMMON-NAME - [ribulose-1,5-bisphosphate-carboxylase]-lysine // UNIQUE-ID - RUBISCO-METHYL-LYSINE TYPES - MODIFIED-RUBISCO COMMON-NAME - [ribulose-1,5-bisphosphate-carboxylase]-N6-methyl-L-lysine // UNIQUE-ID - 3-oxo-arachidoyl-ACPs TYPES - B-KETOACYL-ACP COMMON-NAME - a 3-oxo-arachidoyl-[acp] // UNIQUE-ID - 3-oxo-behenoyl-ACPs TYPES - B-KETOACYL-ACP COMMON-NAME - a 3-oxo-behenoyl-[acp] // UNIQUE-ID - 3-oxo-cerotoyl-ACPs TYPES - B-KETOACYL-ACP COMMON-NAME - a 3-oxo-cerotoyl-[acp] // UNIQUE-ID - 3-oxo-cis-D9-hexadecenoyl-ACPs TYPES - B-KETOACYL-ACP TYPES - Monounsaturated-acyl-ACPs COMMON-NAME - a 3-oxo-cis-Δ9-hexadecenoyl-[acp] // UNIQUE-ID - 3-oxo-cis-vaccenoyl-ACPs TYPES - B-KETOACYL-ACP COMMON-NAME - a 3-oxo-cis-vaccenoyl-[acp] // UNIQUE-ID - 3-oxo-decanoyl-ACPs TYPES - B-KETOACYL-ACP COMMON-NAME - a 3-oxo-decanoyl-[acp] SYNONYMS - a 3-keto-decanoyl-[acp] // UNIQUE-ID - 3-oxo-dodecanoyl-ACPs TYPES - B-KETOACYL-ACP COMMON-NAME - a 3-oxo-dodecanoyl-[acp] SYNONYMS - a 3-keto-dodecanoyl-[acp] // UNIQUE-ID - 3-oxo-hexanoyl-ACPs TYPES - B-KETOACYL-ACP COMMON-NAME - a 3-oxo-hexanoyl-[acp] // UNIQUE-ID - 3-oxo-lignoceroyl-ACPs TYPES - B-KETOACYL-ACP COMMON-NAME - a 3-oxo-lignoceroyl-[acp] // UNIQUE-ID - 3-oxo-myristoyl-ACPs TYPES - B-KETOACYL-ACP COMMON-NAME - a 3-oxo-meristoyl-[acp] SYNONYMS - a 3-oxo-tetradecanoyl-[acp] SYNONYMS - a 3-keto-meristoyl-[acp] // UNIQUE-ID - 3-Oxo-octanoyl-ACPs TYPES - B-KETOACYL-ACP COMMON-NAME - a 3-oxo-octanoyl-[acp] // UNIQUE-ID - 3-oxo-palmitoyl-ACPs TYPES - B-KETOACYL-ACP COMMON-NAME - a 3-oxo-palmitoyl-[acp] SYNONYMS - a 3-keto-palmitoyl-[acp] SYNONYMS - a 3-oxo-hexadecanoyl-[acp] // UNIQUE-ID - 3-oxo-petroselinoyl-ACPs TYPES - B-KETOACYL-ACP COMMON-NAME - a 3-oxo-petroslinoyl-[acp] // UNIQUE-ID - 3-oxo-stearoyl-ACPs TYPES - B-KETOACYL-ACP COMMON-NAME - a 3-oxo-stearoyl-[acp] SYNONYMS - a 3-keto-stearoyl-[acp] SYNONYMS - a 3-oxo-octadecanoyl-[acp] // UNIQUE-ID - Acetoacetyl-ACPs TYPES - B-KETOACYL-ACP COMMON-NAME - an acetoacetyl-[acp] // UNIQUE-ID - cis-19-CP-37-Mex-38-Me-C59-ACPs TYPES - CYCLOPROPYL-ACPs COMMON-NAME - a cis-methoxy-C59-meroacyl-[acp] // UNIQUE-ID - cis-21-CP-39-keto-40-Me-C60-ACPs TYPES - CYCLOPROPYL-ACPs COMMON-NAME - a cis-keto-C60-meroacyl-[acp] // UNIQUE-ID - cis-cis-19-31-dicyclopropyl-C52-ACPs TYPES - CYCLOPROPYL-ACPs COMMON-NAME - a C52-α-meroacyl-[acp] // UNIQUE-ID - trans-18-CP-37-Mex-38-Me-C60-ACPs TYPES - CYCLOPROPYL-ACPs COMMON-NAME - a trans-methoxy-C60-meroacyl-[acp] // UNIQUE-ID - trans-20-CP-22-Me-39-keto-40-Me-C61-ACPs TYPES - CYCLOPROPYL-ACPs COMMON-NAME - a trans-keto-C61-meroacyl-[acp] // UNIQUE-ID - cis-cis-D11-23-3-hydroxyC42-2-ACPs TYPES - Di-unsaturated-acyl-ACPs TYPES - OH-ACYL-ACP COMMON-NAME - a cis,cis-delta11,23-3-hydroxyC42:2-[acp] // UNIQUE-ID - cis-cis-D11-23-3-oxo-C42-2-ACPs TYPES - Di-unsaturated-acyl-ACPs COMMON-NAME - a cis,cis-delta11,23-3-oxo-C42:2-[acp] // UNIQUE-ID - cis-cis-D11-23-C42-2-ACPs TYPES - Di-unsaturated-acyl-ACPs COMMON-NAME - a cis,cis-delta11,23-C42:2-[acp] // UNIQUE-ID - cis-cis-D11-29-3-hydroxyC48-2-ACPs TYPES - Di-unsaturated-acyl-ACPs TYPES - OH-ACYL-ACP COMMON-NAME - a cis,cis-delta11,29-3-hydroxyC48:2-[acp] // UNIQUE-ID - cis-cis-D11-29-3-oxo-C48-2-ACPs TYPES - Di-unsaturated-acyl-ACPs COMMON-NAME - a cis,cis-delta11,29-3-oxo-C48:2-[acp] // UNIQUE-ID - cis-cis-D11-29-C48-2-ACPs TYPES - Di-unsaturated-acyl-ACPs COMMON-NAME - a cis,cis-delta11,29-C48:2-[acp] // UNIQUE-ID - cis-cis-D13-25-3-hydroxyC44-2-ACPs TYPES - Di-unsaturated-acyl-ACPs TYPES - OH-ACYL-ACP COMMON-NAME - a cis,cis-delta13,25-3-hydroxyC44:2-[acp] // UNIQUE-ID - cis-cis-D13-25-3-oxo-C44-2-ACPs TYPES - Di-unsaturated-acyl-ACPs COMMON-NAME - a cis,cis-delta13,25-3-oxo-C44:2-[acp] // UNIQUE-ID - cis-cis-D13-25-C44-2-ACPs TYPES - Di-unsaturated-acyl-ACPs COMMON-NAME - a cis,cis-delta13,25-C44:2-[acp] // UNIQUE-ID - cis-cis-D13-31-3-hydroxyC50-2-ACPs TYPES - Di-unsaturated-acyl-ACPs TYPES - OH-ACYL-ACP COMMON-NAME - a cis,cis-delta13,31-3-hydroxyC50:2-[acp] // UNIQUE-ID - cis-cis-D13-31-3-oxo-C50-2-ACPs TYPES - Di-unsaturated-acyl-ACPs COMMON-NAME - a cis,cis-delta13,31-3-oxo-C50:2-[acp] // UNIQUE-ID - cis-cis-D13-31-C50-2-ACPs TYPES - Di-unsaturated-acyl-ACPs COMMON-NAME - a cis,cis-delta13,31-C50:2-[acp] // UNIQUE-ID - cis-cis-D15-27-3-hydroxyC46-2-ACPs TYPES - Di-unsaturated-acyl-ACPs TYPES - OH-ACYL-ACP COMMON-NAME - a cis,cis-delta15,27-3-hydroxyC46:2-[acp] // UNIQUE-ID - cis-cis-D15-27-3-oxo-C46-2-ACPs TYPES - Di-unsaturated-acyl-ACPs COMMON-NAME - a cis,cis-delta15,27-3-oxo-C46:2-[acp] // UNIQUE-ID - cis-cis-D15-27-C46-2-ACPs TYPES - Di-unsaturated-acyl-ACPs COMMON-NAME - a cis,cis-delta15,27-C46:2-[acp] // UNIQUE-ID - cis-cis-D15-33-3-hydroxyC52-2-ACPs TYPES - Di-unsaturated-acyl-ACPs TYPES - OH-ACYL-ACP COMMON-NAME - a cis,cis-delta15,33-3-hydroxyC52:2-[acp] // UNIQUE-ID - cis-cis-D15-33-3-oxo-C52-2-ACPs TYPES - Di-unsaturated-acyl-ACPs COMMON-NAME - a cis,cis-delta15,33-3-oxo-C52:2-[acp] // UNIQUE-ID - cis-cis-D15-33-C52-2-ACPs TYPES - Di-unsaturated-acyl-ACPs COMMON-NAME - a cis,cis-delta15,33-C52:2-[acp] // UNIQUE-ID - cis-cis-D17-29-3-hydroxyC48-2-ACPs TYPES - Di-unsaturated-acyl-ACPs TYPES - OH-ACYL-ACP COMMON-NAME - a cis,cis-delta17,29-3-hydroxyC48:2-[acp] // UNIQUE-ID - cis-cis-D17-29-3-oxo-C48-2-ACPs TYPES - Di-unsaturated-acyl-ACPs COMMON-NAME - a cis,cis-delta17,29-3-oxo-C48:2-[acp] // UNIQUE-ID - cis-cis-D17-29-C48-2-ACPs TYPES - Di-unsaturated-acyl-ACPs COMMON-NAME - a cis,cis-delta17,29-C48:2-[acp] // UNIQUE-ID - cis-cis-D17-35-3-hydroxyC54-2-ACPs TYPES - Di-unsaturated-acyl-ACPs TYPES - OH-ACYL-ACP COMMON-NAME - a cis,cis-delta17,35-3-hydroxyC54:2-[acp] // UNIQUE-ID - cis-cis-D17-35-3-oxo-C54-2-ACPs TYPES - Di-unsaturated-acyl-ACPs COMMON-NAME - a cis,cis-delta17,35-3-oxo-C54:2-[acp] // UNIQUE-ID - cis-cis-D17-35-C54-2-ACPs TYPES - Di-unsaturated-acyl-ACPs COMMON-NAME - a cis,cis-delta17,35-C54:2-[acp] // UNIQUE-ID - cis-cis-D19-31-3-hydroxyC50-2-ACPs TYPES - Di-unsaturated-acyl-ACPs TYPES - OH-ACYL-ACP COMMON-NAME - a cis,cis-delta19,31-3-hydroxyC50:2-[acp] // UNIQUE-ID - cis-cis-D19-31-3-oxo-C50-2-ACPs TYPES - Di-unsaturated-acyl-ACPs COMMON-NAME - a cis,cis-delta19,31-3-oxo-C50:2-[acp] // UNIQUE-ID - cis-cis-D19-31-C50-2-ACPs TYPES - Di-unsaturated-acyl-ACPs COMMON-NAME - a cis,cis-delta19,31-C50:2-[acp] // UNIQUE-ID - cis-cis-D19-37-3-hydroxyC56-2-ACPs TYPES - Di-unsaturated-acyl-ACPs TYPES - OH-ACYL-ACP COMMON-NAME - a cis,cis-delta19,37-3-hydroxy-C56:2-[acp] // UNIQUE-ID - cis-cis-D19-37-3-oxo-C56-2-ACPs TYPES - Di-unsaturated-acyl-ACPs COMMON-NAME - a cis,cis-delta19,37-3-oxo-C56:2-[acp] // UNIQUE-ID - cis-cis-D19-37-C56-2-ACPs TYPES - Di-unsaturated-acyl-ACPs COMMON-NAME - a cis,cis-delta19-37-C56:2-[acp] // UNIQUE-ID - cis-cis-D21-39-3-hydroxyC58-2-ACPs TYPES - Di-unsaturated-acyl-ACPs TYPES - OH-ACYL-ACP COMMON-NAME - a cis,cis-delta21,39-3-hydroxyC58:2-[acp] // UNIQUE-ID - cis-cis-D21-39-3-oxo-C58-2-ACPs TYPES - Di-unsaturated-acyl-ACPs COMMON-NAME - a cis,cis-delta21,39-3-oxo-C58:2-[acp] // UNIQUE-ID - cis-cis-D21-39-C58-2-ACPs TYPES - Di-unsaturated-acyl-ACPs COMMON-NAME - a cis,cis-delta21,39-C58:2-[acp] // UNIQUE-ID - cis-cis-D3-15-C34-2-ACPs TYPES - Di-unsaturated-acyl-ACPs COMMON-NAME - a cis,cis-delta3,15-C34:2-[acp] // UNIQUE-ID - cis-cis-D3-21-C40-2-ACPs TYPES - Di-unsaturated-acyl-ACPs COMMON-NAME - a cis,cis-delta3,21-C40:2-[acp] // UNIQUE-ID - cis-cis-D5-17-3-hydroxyC36-2-ACPs TYPES - Di-unsaturated-acyl-ACPs TYPES - OH-ACYL-ACP COMMON-NAME - a cis,cis-delta5,17-3-hydroxyC36:2[acp] // UNIQUE-ID - cis-cis-D5-17-3-oxo-C36-2-ACPs TYPES - Di-unsaturated-acyl-ACPs COMMON-NAME - a cis,cis-delta5,17-3-oxo-C36:2-[acp] // UNIQUE-ID - cis-cis-D5-17-C36-2-ACPs TYPES - Di-unsaturated-acyl-ACPs COMMON-NAME - a cis,cis-delta5,17-C36:2-[acp] // UNIQUE-ID - cis-cis-D5-23-3-hydroxyC42-2-ACPs TYPES - Di-unsaturated-acyl-ACPs TYPES - OH-ACYL-ACP COMMON-NAME - a cis,cis-delta5,23-3-hydroxyC42:2-[acp] // UNIQUE-ID - cis-cis-D5-23-3-oxo-C42-2-ACPs TYPES - Di-unsaturated-acyl-ACPs COMMON-NAME - a cis,cis-delta5,23-3-oxo-C42:2-[acp] // UNIQUE-ID - cis-cis-D5-23-C42-2-ACPs TYPES - Di-unsaturated-acyl-ACPs COMMON-NAME - a cis,cis-delta5,23-C42:2-[acp] // UNIQUE-ID - cis-cis-D7-19-3-hydroxyC38-2-ACPs TYPES - Di-unsaturated-acyl-ACPs TYPES - OH-ACYL-ACP COMMON-NAME - a cis,cis-delta7,19-3-hydroxyC38:2-[acp] // UNIQUE-ID - cis-cis-D7-19-3-oxo-C38-2-ACPs TYPES - Di-unsaturated-acyl-ACPs COMMON-NAME - a cis,cis-delta7,19-3-oxo-C38:2-[acp] // UNIQUE-ID - cis-cis-D7-19-C38-2-ACPs TYPES - Di-unsaturated-acyl-ACPs COMMON-NAME - a cis,cis-delta7,19-C38:2-[acp] // UNIQUE-ID - cis-cis-D7-25-3-hydroxyC44-2-ACPs TYPES - Di-unsaturated-acyl-ACPs TYPES - OH-ACYL-ACP COMMON-NAME - a cis,cis-delta7,25-3-hydroxyC44:2-[acp] // UNIQUE-ID - cis-cis-D7-25-3-oxo-C44-2-ACPs TYPES - Di-unsaturated-acyl-ACPs COMMON-NAME - a cis,cis-delta7,25-3-oxo-C44:2-[acp] // UNIQUE-ID - cis-cis-D7-25-C44-2-ACPs TYPES - Di-unsaturated-acyl-ACPs COMMON-NAME - a cis,cis-delta7,25-C44:2-[acp] // UNIQUE-ID - cis-cis-D9-21-3-hydroxyC40-2-ACPs TYPES - Di-unsaturated-acyl-ACPs TYPES - OH-ACYL-ACP COMMON-NAME - a cis,cis-delta9,21-3-hydroxyC40:2-[acp] // UNIQUE-ID - cis-cis-D9-21-3-oxo-C40-2-ACPs TYPES - Di-unsaturated-acyl-ACPs COMMON-NAME - a cis,cis-delta9,21-3-oxo-C40:2-[acp] // UNIQUE-ID - cis-cis-D9-21-C40-2-ACPs TYPES - Di-unsaturated-acyl-ACPs COMMON-NAME - a cis,cis-delta9,21-C40:2-[acp] // UNIQUE-ID - cis-cis-D9-27-3-hydroxyC46-2-ACPs TYPES - Di-unsaturated-acyl-ACPs TYPES - OH-ACYL-ACP COMMON-NAME - a cis,cis-delta9,27-3-hydroxyC46:2-[acp] // UNIQUE-ID - cis-cis-D9-27-3-oxo-C46-2-ACPs TYPES - Di-unsaturated-acyl-ACPs COMMON-NAME - a cis,cis-delta9,27-3-oxo-C46:2-[acp] // UNIQUE-ID - cis-cis-D9-27-C46-2-ACPs TYPES - Di-unsaturated-acyl-ACPs COMMON-NAME - a cis,cis-delta9,27-C46:2-[acp] // UNIQUE-ID - trans-D2-cis-D11-melissoyl-ACPs TYPES - Di-unsaturated-acyl-ACPs COMMON-NAME - a trans-delta2-cis-delta11-C30:2-[acp] // UNIQUE-ID - trans-D2-cis-D13-lacceroyl-ACPs TYPES - Di-unsaturated-acyl-ACPs COMMON-NAME - a trans-delta2-cis-delta13-C32:2-[acp] // UNIQUE-ID - trans-D2-cis-D15-gheddoyl-ACPs TYPES - Di-unsaturated-acyl-ACPs COMMON-NAME - a trans-delta2-cis-delta15-C34:2-[acp] // UNIQUE-ID - trans-D2-cis-D17-C36-ACPs TYPES - Di-unsaturated-acyl-ACPs COMMON-NAME - a trans-delta2-cis-delta17-C36:2-[acp] // UNIQUE-ID - trans-D2-cis-D19-C38-ACPs TYPES - Di-unsaturated-acyl-ACPs COMMON-NAME - a trans-delta2-cis-delta19-C38:2-[acp] // UNIQUE-ID - trans-D2-cis-D21-C40-ACPs TYPES - Di-unsaturated-acyl-ACPs COMMON-NAME - a trans-delta2-cis-delta21-C40:2-[acp] // UNIQUE-ID - trans-D2-cis-D5-lignoceroyl-ACPs TYPES - Di-unsaturated-acyl-ACPs COMMON-NAME - a trans-delta2-cis-delta5-C24:2-[acp] // UNIQUE-ID - trans-D2-cis-D7-cerotoyl-ACPs TYPES - Di-unsaturated-acyl-ACPs COMMON-NAME - a trans-delta2-cis-delta7-C26:2-[acp] // UNIQUE-ID - trans-D2-cis-D9-montanoyl-ACPs TYPES - Di-unsaturated-acyl-ACPs COMMON-NAME - a trans-delta2-cis-delta9-C28:2-[acp] // UNIQUE-ID - Trans-D3-cis-D5-dodecenoyl-ACPs TYPES - Di-unsaturated-acyl-ACPs COMMON-NAME - a trans-Δ3-cis-Δ5-dodecenoyl-[acp] // UNIQUE-ID - Trans-D3-cis-D7-tetradecenoyl-ACPs TYPES - Di-unsaturated-acyl-ACPs COMMON-NAME - a trans-Δ3-cis-Δ7-tetradecenoyl-[acp] // UNIQUE-ID - Trans-D3-cis-D9-hexadecenoyl-ACPs TYPES - Di-unsaturated-acyl-ACPs COMMON-NAME - a trans-Δ3-cis-Δ9-hexadecenoyl-[acp] // UNIQUE-ID - 3-hydroxy-cis-D7-tetraecenoyl-ACPs TYPES - OH-ACYL-ACP TYPES - Monounsaturated-acyl-ACPs COMMON-NAME - a 3-hydroxy cis Δ7-tetradecenoyl-[acp] // UNIQUE-ID - 3-hydroxy-cis-D9-hexaecenoyl-ACPs TYPES - OH-ACYL-ACP TYPES - Monounsaturated-acyl-ACPs COMMON-NAME - a 3-hydroxy cis Δ9-hexadecenoyl-[acp] // UNIQUE-ID - 3-oxo-cis-D7-tetradecenoyl-ACPs TYPES - Monounsaturated-acyl-ACPs COMMON-NAME - a 3-oxo-cis-Δ7-tetradecenoyl-[acp] // UNIQUE-ID - 3-Oxo-cis-D7-tetraecenoyl-ACPs TYPES - Monounsaturated-acyl-ACPs COMMON-NAME - a cis-Δ7-tetradecenoyl-[acp] // UNIQUE-ID - b-Hydroxy-cis-D5-dodecenoyl-ACPs TYPES - Monounsaturated-acyl-ACPs COMMON-NAME - a 3-hydroxy cis Δ5-dodecenoyl-[acp] // UNIQUE-ID - b-Keto-cis-D5-dodecenoyl-ACPs TYPES - Monounsaturated-acyl-ACPs COMMON-NAME - a 3-oxo-cis-Δ5-dodecenoyl-[acp] // UNIQUE-ID - BETA-HYDROXY-ACYL-ACPs TYPES - Monounsaturated-acyl-ACPs COMMON-NAME - a beta-hydroxyacyl-acp // UNIQUE-ID - BETA-KETO-ACYL-ACPs TYPES - Monounsaturated-acyl-ACPs COMMON-NAME - a beta-keto-acyl-acp // UNIQUE-ID - Cis-3-4-dehydrododecanoyl-ACPs TYPES - Monounsaturated-acyl-ACPs COMMON-NAME - a cis-3,4-dehydrodecanoyl-[acp] // UNIQUE-ID - cis-D19-37-OH-38-Me-C57-1-ACPs TYPES - Monounsaturated-acyl-ACPs COMMON-NAME - a cis-delta19-37-hydroxy-38-methyl-C57:1-[acp] // UNIQUE-ID - cis-D21-39-OH-40-Me-C59-1-ACPs TYPES - Monounsaturated-acyl-ACPs COMMON-NAME - a cis-delta21-39-hydroxy-40-methyl-C59:1-[acp] // UNIQUE-ID - Cis-delta-3-decenoyl-ACPs TYPES - Monounsaturated-acyl-ACPs COMMON-NAME - a cis-Δ3-decenoyl-[acp] // UNIQUE-ID - cis-delta11-melissoyl-ACPs TYPES - Monounsaturated-acyl-ACPs COMMON-NAME - a cis-delta11-C30:1-[acp] // UNIQUE-ID - cis-delta13-lacceroyl-ACPs TYPES - Monounsaturated-acyl-ACPs COMMON-NAME - a cis-delta13-C32:1-[acp] // UNIQUE-ID - cis-delta15-gheddoyl-ACPs TYPES - Monounsaturated-acyl-ACPs COMMON-NAME - a cis-delta15-C34:1-[acp] // UNIQUE-ID - cis-delta17-C36-ACPs TYPES - Monounsaturated-acyl-ACPs COMMON-NAME - a cis-delta17-C36:1-[acp] // UNIQUE-ID - cis-delta19-C38-ACPs TYPES - Monounsaturated-acyl-ACPs COMMON-NAME - a cis-delta19-C38:1-[acp] // UNIQUE-ID - cis-delta3-behenoyl-ACPs TYPES - Monounsaturated-acyl-ACPs COMMON-NAME - a cis-docos-3-enoyl-[acp] // UNIQUE-ID - Cis-Delta5-dodecenoyl-ACPs TYPES - Monounsaturated-acyl-ACPs COMMON-NAME - a cis-Δ5-dodecenoyl-[acp] // UNIQUE-ID - cis-delta5-lignoceroyl-ACPs TYPES - Monounsaturated-acyl-ACPs COMMON-NAME - a cis-delta5-C24:1-[acp] // UNIQUE-ID - cis-delta7-cerotoyl-ACPs TYPES - Monounsaturated-acyl-ACPs COMMON-NAME - a cis-delta7-C26:1-[acp] // UNIQUE-ID - Cis-Delta7-tetradecenoyl-ACPs TYPES - Monounsaturated-acyl-ACPs COMMON-NAME - a cis-Δ7-tetradecenoyl-[acp] // UNIQUE-ID - cis-delta9-montanoyl-ACPs TYPES - Monounsaturated-acyl-ACPs COMMON-NAME - a cis-delta9-C28:1-[acp] // UNIQUE-ID - CIS-ENOYL-ACP TYPES - Monounsaturated-acyl-ACPs COMMON-NAME - a cis-enoyl-acyl-[acp] SYNONYMS - CH3(CH2)x-1CH=CHCH2CO-S-ACP // UNIQUE-ID - Cis-vaccenoyl-ACPs TYPES - Monounsaturated-acyl-ACPs COMMON-NAME - a cis-vaccenoyl-[acp] SYNONYMS - a (Z)-3-oxooctadec-13-enoyl-[acp] SYNONYMS - a (Z)-3-oxooctadec-13-enoyl-[acyl-carrier-protein] SYNONYMS - a cis-vaccenoyl-[acyl-carrier protein] // UNIQUE-ID - Delta4-hexadecenoyl-ACPs TYPES - Monounsaturated-acyl-ACPs COMMON-NAME - a Δ4-hexadecenoyl-[acp] SYNONYMS - a Δ4-hexadecenoyl-[acyl-carrier-protein] // UNIQUE-ID - Delta6-hexadecenoyl-ACPs TYPES - Monounsaturated-acyl-ACPs COMMON-NAME - a Δ6-hexadecenoyl-[acp] SYNONYMS - a Δ6-hexadecenoyl-[acyl-carrier-protein] // UNIQUE-ID - Oleoyl-ACPs TYPES - Monounsaturated-acyl-ACPs COMMON-NAME - an oleoyl-[acp] // UNIQUE-ID - Palmitoleoyl-ACPs TYPES - Monounsaturated-acyl-ACPs COMMON-NAME - a palmitoleoyl-[acp] SYNONYMS - a (Z)-hexadec-11-enoyl-[acp] SYNONYMS - a (Z)-hexadec-11-enoyl-[acyl-carrier-protein] // UNIQUE-ID - Petroselinoyl-ACPs TYPES - Monounsaturated-acyl-ACPs COMMON-NAME - a petroselinoyl-[acp] SYNONYMS - a petroselinoyl-[acyl-carrier-protein] // UNIQUE-ID - trans-D18-37-OH-38-Me-C58-1-ACPs TYPES - Monounsaturated-acyl-ACPs COMMON-NAME - a trans-delta18-37-hydroxy-38-methyl-C58:1-[acp] // UNIQUE-ID - TRANS-D2-ENOYL-ACP TYPES - Monounsaturated-acyl-ACPs COMMON-NAME - a trans-Δ2-enoyl-acyl-[acp] SYNONYMS - trans-2,3-dehydroacyl-[acyl-carrier protein] SYNONYMS - trans-2,3-dehydroacyl-ACP SYNONYMS - CH3(CH2)xCH=CHCO-S-ACP SYNONYMS - α,β-trans-enoyl-ACP // UNIQUE-ID - trans-D20-39-OH-40-Me-C60-1-ACPs TYPES - Monounsaturated-acyl-ACPs COMMON-NAME - a trans-delta20-39-hydroxy-40-methyl-C60:1-[acp] // UNIQUE-ID - D-Phenylalanyl-Acps TYPES - Nonribosomal-Peptide-Acps COMMON-NAME - D-phenylalanyl-[NRPS-pcp] COMMENT - This class contains an acyl carrier protein holoenzyme domain of a nonribosomal peptide synthetase bound to /|FRAME: CPD-216|. This domain is also known as a thiolation domain, or a peptidyl carrier protein domain. / /This chemical structure is modified from |CITS: [16195555]|. The holo-acyl carrier protein (holo-[acp]) is represented /here as a superatom. The synonym for this structure was named using the IUPAC name generator (Preferred /IUPAC Name) in MarvinSketch version 5.0 from ChemAxon. Note that these names do not take into account the /thioester linkage between the phosphopantetheinyl arm of the holo-acyl carrier protein and the amino acid. SYNONYMS - (3R)-3-amino-4-phenylbutan-2-one-[acp] // UNIQUE-ID - Gramicidin-Pentapeptidyl-Acps TYPES - Nonribosomal-Peptide-Acps COMMON-NAME - D-phenylalanyl-L-prolyl-L-valyl-L-ornithyl-L-leucyl-[NRPS-pcp] COMMENT - This class contains an acyl carrier protein holoenzyme domain of a nonribosomal peptide synthetase bound to /the pentapeptide shown here. This domain is also known as a thiolation domain, or a peptidyl carrier protein domain. / /This chemical structure is modified from |CITS: [16195555]|. The holo-acyl carrier protein (holo-[acp]) is represented /here as a superatom. The synonym for this structure was named using the IUPAC name generator (Preferred /IUPAC Name) in MarvinSketch version 5.0 from ChemAxon. Note that these names do not take into account the /thioester linkage between the phosphopantetheinyl arm of the holo-acyl carrier protein and the amino acid. SYNONYMS - 5-amino-2-(2-{[1-(2-amino-3-phenylpropanoyl)pyrrolidin-2-yl]formamido}-3-methylbutanamido)-N-(5-methyl-2-oxohexan-3-yl)pentanamide-[acp] // UNIQUE-ID - 3-Hydroxy-octanoyl-ACPs TYPES - OH-ACYL-ACP COMMON-NAME - an (R)-3-hydroxyoctanoyl-[acp] SYNONYMS - a β-hydroxyoctanoyl-[acp] // UNIQUE-ID - Beta-3-hydroxybutyryl-ACPs TYPES - OH-ACYL-ACP COMMON-NAME - an (R)-3-hydroxybutanoyl-[acp] SYNONYMS - a β-3-hydroxybutyryl-[acp] // UNIQUE-ID - Beta-hydroxydecanoyl-ACPs TYPES - OH-ACYL-ACP COMMON-NAME - an (R)-3-hydroxydecanoyl-[acp] SYNONYMS - an (R)-3-hydroxydecanoyl-[acyl-carrier protein] SYNONYMS - a β-hydroxydecanoyl-[acp] // UNIQUE-ID - R-3-hydroxy-cis-vaccenoyl-ACPs TYPES - OH-ACYL-ACP COMMON-NAME - a (R)-3-hydroxy-cis-vaccenoyl-[acp] // UNIQUE-ID - R-3-hydroxyarachidoyl-ACPs TYPES - OH-ACYL-ACP COMMON-NAME - a (R)-3-hydroxyarachidoyl-[acp] // UNIQUE-ID - R-3-hydroxybehenoyl-ACPs TYPES - OH-ACYL-ACP COMMON-NAME - a (R)-3-hydroxybehenoyl-[acp] // UNIQUE-ID - R-3-hydroxycerotoyl-ACPs TYPES - OH-ACYL-ACP COMMON-NAME - a (R)-3-hydroxycerotoyl-[acp] // UNIQUE-ID - R-3-hydroxydodecanoyl-ACPs TYPES - OH-ACYL-ACP COMMON-NAME - a (R)-3-hydroxydodecanoyl-[acp] SYNONYMS - a β-hydroxydodecanoyl-[acp] // UNIQUE-ID - R-3-hydroxyhexanoyl-ACPs TYPES - OH-ACYL-ACP COMMON-NAME - an (R)-3-hydroxyhexanoyl-[acp] SYNONYMS - a β-hydroxyhexanoyl-[acp] // UNIQUE-ID - R-3-hydroxylignoceroyl-ACPs TYPES - OH-ACYL-ACP COMMON-NAME - a (R)-3-hydroxylignoceroyl-[acp] // UNIQUE-ID - R-3-hydroxymyristoyl-ACPs TYPES - OH-ACYL-ACP COMMON-NAME - an (R)-3-hydroxymyristoyl-[acp] SYNONYMS - a β-hydroxymyristoyl-[acp] // UNIQUE-ID - R-3-Hydroxypalmitoyl-ACPs TYPES - OH-ACYL-ACP COMMON-NAME - an (R)-3-hydroxypalmitoyl-[acp] SYNONYMS - a β-hydroxypalmitoyl-[acp] // UNIQUE-ID - R-3-hydroxypetroselinoyl-ACPs TYPES - OH-ACYL-ACP COMMON-NAME - a (R)-3-hydroxypetroselinoyl-[acp] // UNIQUE-ID - R-3-hydroxystearoyl-ACPs TYPES - OH-ACYL-ACP COMMON-NAME - a (R)-3-hydroxystearoyl-[acp] SYNONYMS - a (R)-3-hydroxyoctadecnoyl-[acp] // UNIQUE-ID - ACETYL-ACP TYPES - Saturated-acyl-ACPs COMMON-NAME - an acetyl-[acp] SYNONYMS - B1094 SYNONYMS - AcpP SYNONYMS - acetyl-[acyl-carrier protein] SYNONYMS - acetylacylcarrier-protein // UNIQUE-ID - Arachidoyl-ACPs TYPES - Saturated-acyl-ACPs COMMON-NAME - an arachidoyl-[acp] // UNIQUE-ID - Behenoyl-ACPs TYPES - Saturated-acyl-ACPs COMMON-NAME - a behenoyl-[acp] // UNIQUE-ID - Butanoyl-ACPs TYPES - Saturated-acyl-ACPs COMMON-NAME - a butyryl-[acp] SYNONYMS - butanoyl-[acp] // UNIQUE-ID - Cerotoyl-ACPs TYPES - Saturated-acyl-ACPs COMMON-NAME - a cerotoyl-[acp] // UNIQUE-ID - CITRYL-ACP TYPES - Saturated-acyl-ACPs COMMON-NAME - a citryl-[acp] SYNONYMS - AcpP // UNIQUE-ID - Decanoyl-ACPs TYPES - Saturated-acyl-ACPs COMMON-NAME - a decanoyl-[acp] // UNIQUE-ID - Dodecanoyl-ACPs TYPES - Saturated-acyl-ACPs COMMON-NAME - a dodecanoyl-[acp] SYNONYMS - a dodecanoyl-[acyl-carrier protein] SYNONYMS - a lauryl-[acp] // UNIQUE-ID - Hexanoyl-ACPs TYPES - Saturated-acyl-ACPs COMMON-NAME - a hexanoyl-[acp] // UNIQUE-ID - Lignoceroyl-ACPs TYPES - Saturated-acyl-ACPs COMMON-NAME - a lignoceroyl-[acp] // UNIQUE-ID - MALONYL-ACP TYPES - Saturated-acyl-ACPs COMMON-NAME - a malonyl-[acp] SYNONYMS - B1094 SYNONYMS - AcpP SYNONYMS - malonyl-[acyl-carrier protein] SYNONYMS - malonyl-S-ACP SYNONYMS - malonyl-acyl-carrier-protein // UNIQUE-ID - Myristoyl-ACPs TYPES - Saturated-acyl-ACPs COMMON-NAME - a myristoyl-[acp] // UNIQUE-ID - Octanoyl-ACPs TYPES - Saturated-acyl-ACPs COMMON-NAME - an octanoyl-[acp] COMMENT - Lipoate synthase catalyzes the step of lipoate biosynthesis at which sulfur is inserted into /octanoyl-ACP to form the lipoate moiety |CITS: [8444795], [11106496]|. /Lipoate synthase is a LipA homodimer with two (4Fe-4S) iron-sulfur clusters per protein dimer under /anaerobic conditions, and these clusters are oxidized to the (2Fe-2S) state in air |CITS: [10747808] /[10403368]|. The enzyme uses octanoyl-ACP, but not octanoate, as substrate and also uses /S-adenosyl methionine |CITS: [11106496]|. // UNIQUE-ID - Palmitoyl-ACPs TYPES - Saturated-acyl-ACPs COMMON-NAME - a palmitoyl-[acp] SYNONYMS - a palmitoyl-[acyl-carrier-protein] // UNIQUE-ID - Saturated-Fatty-Acyl-ACPs TYPES - Saturated-acyl-ACPs COMMON-NAME - a 2,3,4-saturated fatty acyl-[acp] // UNIQUE-ID - Stearoyl-ACPs TYPES - Saturated-acyl-ACPs COMMON-NAME - a stearoyl-[acp] // UNIQUE-ID - trans-D2-cis-cis-D11-23-C42-3-ACPs TYPES - Tri-unsaturated-acyl-ACPs COMMON-NAME - a trans-delta2-cis,cis-delta11,23-C42:3-[acp] // UNIQUE-ID - trans-D2-cis-cis-D11-29-C48-3-ACPs TYPES - Tri-unsaturated-acyl-ACPs COMMON-NAME - a trans-delta2-cis,cis-delta11,29-C48:3-[acp] // UNIQUE-ID - trans-D2-cis-cis-D13-25-C44-3-ACPs TYPES - Tri-unsaturated-acyl-ACPs COMMON-NAME - a trans-delta2-cis,cis-delta13,25-C44:3-[acp] // UNIQUE-ID - trans-D2-cis-cis-D13-31-C50-3-ACPs TYPES - Tri-unsaturated-acyl-ACPs COMMON-NAME - a trans-delta2-cis,cis-delta13,31-C50:3-[acp] // UNIQUE-ID - trans-D2-cis-cis-D15-27-C46-3-ACPs TYPES - Tri-unsaturated-acyl-ACPs COMMON-NAME - a trans-delta2-cis,cis-delta15,27-C46:3-[acp] // UNIQUE-ID - trans-D2-cis-cis-D15-33-C52-3-ACPs TYPES - Tri-unsaturated-acyl-ACPs COMMON-NAME - a trans-delta2-cis,cis-delta15,33-C52:3-[acp] // UNIQUE-ID - trans-D2-cis-cis-D17-29-C48-3-ACPs TYPES - Tri-unsaturated-acyl-ACPs COMMON-NAME - a trans-delta2-cis,cis-delta17,29-C48:3-[acp] // UNIQUE-ID - trans-D2-cis-cis-D17-35-C54-3-ACPs TYPES - Tri-unsaturated-acyl-ACPs COMMON-NAME - a trans-delta2-cis,cis-delta17,35-C54:3-[acp] // UNIQUE-ID - trans-D2-cis-cis-D19-31-C50-3-ACPs TYPES - Tri-unsaturated-acyl-ACPs COMMON-NAME - a trans-delta2-cis,cis-delta19,31-C50:3-[acp] // UNIQUE-ID - trans-D2-cis-cis-D19-37-C56-3-ACPs TYPES - Tri-unsaturated-acyl-ACPs COMMON-NAME - a trans-delta2-cis,cis-delta19,37-C56:3-[acp] // UNIQUE-ID - trans-D2-cis-cis-D21-39-C58-3-ACPs TYPES - Tri-unsaturated-acyl-ACPs COMMON-NAME - a trans-delta2-cis,cis-delta21,39-C58:3-[acp] // UNIQUE-ID - trans-D2-cis-cis-D5-17-C36-3-ACPs TYPES - Tri-unsaturated-acyl-ACPs COMMON-NAME - a trans-delta2-cis,cis-5,17-C36:3-[acp] // UNIQUE-ID - trans-D2-cis-cis-D5-23-C42-3-ACPs TYPES - Tri-unsaturated-acyl-ACPs COMMON-NAME - a trans-delta2-cis,cis-delta5,23-C42:3-[acp] // UNIQUE-ID - trans-D2-cis-cis-D7-19-C38-3-ACPs TYPES - Tri-unsaturated-acyl-ACPs COMMON-NAME - a trans-delta2-cis-cis-delta7-19-C38:3-[acp] // UNIQUE-ID - trans-D2-cis-cis-D7-25-C44-3-ACPs TYPES - Tri-unsaturated-acyl-ACPs COMMON-NAME - a trans-delta2-cis,cis-delta7,25-C44:3-[acp] // UNIQUE-ID - trans-D2-cis-cis-D9-21-C40-3-ACPs TYPES - Tri-unsaturated-acyl-ACPs COMMON-NAME - a trans-delta2-cis,cis-9,21-C40:3-[acp] // UNIQUE-ID - trans-D2-cis-cis-D9-27-C46-3-ACPs TYPES - Tri-unsaturated-acyl-ACPs COMMON-NAME - a trans-delta2-cis,cis-delta9,27-C46:3-[acp] // UNIQUE-ID - Charged-tRNAs TYPES - Modified-tRNAs COMMON-NAME - a charged tRNA // UNIQUE-ID - Cis-Prenyl-tRNAs TYPES - Modified-tRNAs COMMON-NAME - cis-prenyl-tRNA // UNIQUE-ID - Mnm5Se2U-containing-tRNAs TYPES - Modified-tRNAs COMMON-NAME - tRNA containing 5-methylaminomethyl-2-selenouridine // UNIQUE-ID - N-Substituted-Aminoacyl-tRNA TYPES - Modified-tRNAs COMMON-NAME - N-substituted aminoacyl-tRNA // UNIQUE-ID - Phosphorylated-Charged-tRNAs TYPES - Modified-tRNAs COMMON-NAME - a phosphorylated charged tRNA // UNIQUE-ID - Prenyl-tRNAs TYPES - Modified-tRNAs COMMON-NAME - prenyl-tRNA // UNIQUE-ID - tRNA-Containing-2-O-Methylguanosine TYPES - Modified-tRNAs COMMON-NAME - a tRNA containing 2'-O-methylguanosine // UNIQUE-ID - tRNA-Containing-5-Methylcytosine TYPES - Modified-tRNAs COMMON-NAME - tRNA containing 5-methylcytosine // UNIQUE-ID - tRNA-Containing-5MeAminoMe-2-ThioU TYPES - Modified-tRNAs COMMON-NAME - tRNA containing 5-methylaminomethyl-2-thiouridylate // UNIQUE-ID - tRNA-Containing-6Isopentenyladenosine TYPES - Modified-tRNAs COMMON-NAME - tRNA containing N6-dimethylallyladenosine // UNIQUE-ID - tRNA-Containing-N1-Methyladenine TYPES - Modified-tRNAs COMMON-NAME - tRNA containing N1-methyladenine // UNIQUE-ID - tRNA-Containing-N1-Methylguanine TYPES - Modified-tRNAs COMMON-NAME - tRNA containing N1-methylguanine // UNIQUE-ID - tRNA-Containing-N2-Methylguanine TYPES - Modified-tRNAs COMMON-NAME - tRNA containing N2-methylguanine // UNIQUE-ID - tRNA-Containing-Thionucleotide TYPES - Modified-tRNAs COMMON-NAME - tRNA containing a thionucleotide // UNIQUE-ID - tRNA-Dihydrouridines TYPES - Modified-tRNAs COMMON-NAME - tRNA containing 5,6-dihydrouridine COMMENT - 5,6-Dihydrouridine is a modification of tRNA is widely observed in prokaryotes and eukaryotes, and also in some /archae. Most Dihydrouridines are found in the D loop of t-RNAs.It is thought to be formed post-transcriptionally by /the reduction of uridines in tRNA transcripts. // UNIQUE-ID - tRNAs-Containing-N6-Methyladenine TYPES - Modified-tRNAs COMMON-NAME - tRNA containing N6-methyladenine // UNIQUE-ID - tRNAs-with-N7-methyl-guanine TYPES - Modified-tRNAs COMMON-NAME - a tRNA containing N7-methylguanine SYNONYMS - tRNAs-with-N7-methyl-guanine // UNIQUE-ID - 2-phospho-ligated-tRNA TYPES - tRNAs COMMON-NAME - a 2'-phospho-[ligated tRNA] // UNIQUE-ID - ALA-tRNAs TYPES - tRNAs COMMON-NAME - tRNAala SYNONYMS - TRNA(ALA) // UNIQUE-ID - AminoAcyl-tRNAs TYPES - tRNAs COMMON-NAME - an aminoacyl-tRNA // UNIQUE-ID - ARG-tRNAs TYPES - tRNAs COMMON-NAME - tRNAarg SYNONYMS - TRNA(ARG) // UNIQUE-ID - ASX-tRNAs TYPES - tRNAs COMMON-NAME - tRNAAsx // UNIQUE-ID - CYS-tRNAs TYPES - tRNAs COMMON-NAME - tRNAcys SYNONYMS - TRNA(CYS) // UNIQUE-ID - fMET-tRNAs TYPES - tRNAs COMMON-NAME - tRNAfmet SYNONYMS - TRNA(fMET) SYNONYMS - N-formylmethionyl-tRNA // UNIQUE-ID - GLX-tRNAs TYPES - tRNAs COMMON-NAME - tRNAGlx // UNIQUE-ID - GLY-tRNAs TYPES - tRNAs COMMON-NAME - tRNAgly SYNONYMS - TRNA(GLY) // UNIQUE-ID - HIS-tRNAs TYPES - tRNAs COMMON-NAME - tRNAhis SYNONYMS - TRNA(HIS) // UNIQUE-ID - ILE-tRNAs TYPES - tRNAs COMMON-NAME - tRNAile SYNONYMS - TRNA(ILE) // UNIQUE-ID - L-Methionylaminoacyl-tRNAs TYPES - tRNAs COMMON-NAME - a L-methionylaminoacyl-tRNA // UNIQUE-ID - LEU-tRNAs TYPES - tRNAs COMMON-NAME - tRNAleu SYNONYMS - TRNA(LEU) // UNIQUE-ID - LYS-tRNAs TYPES - tRNAs COMMON-NAME - tRNAlys SYNONYMS - TRNA(LYS) // UNIQUE-ID - MET-tRNAs TYPES - tRNAs COMMON-NAME - tRNAmet SYNONYMS - TRNA(MET) // UNIQUE-ID - MITOCHONDRIALLYENCODEDTRNA-tRNAs TYPES - tRNAs // UNIQUE-ID - NIL-tRNAs TYPES - tRNAs // UNIQUE-ID - Peptidyl-AminoAcyl-tRNAs TYPES - tRNAs COMMON-NAME - a peptidyl aminoacyl tRNA // UNIQUE-ID - Peptidyl-tRNAs TYPES - tRNAs COMMON-NAME - a peptidyl tRNA // UNIQUE-ID - PHE-tRNAs TYPES - tRNAs COMMON-NAME - tRNAphe SYNONYMS - TRNA(PHE) // UNIQUE-ID - PRO-tRNAs TYPES - tRNAs COMMON-NAME - tRNApro SYNONYMS - TRNA(PRO) // UNIQUE-ID - PYL-tRNA TYPES - tRNAs COMMON-NAME - tRNApyl // UNIQUE-ID - SEC-tRNAs TYPES - tRNAs COMMON-NAME - tRNAsec COMMENT - The gene product of selC is tRNAsec , a tRNA that recognizes certain designated UGA stop /codons to insert selenocysteine, which is essential for the activity of certain proteins. tRNAsec is a class II /tRNA and the largest tRNA in E. coli and other organisms. It is charged by seryl-tRNA synthase, but the /immediate product seryl-tRNAsec does not insert serine residues at UGA codons in the process of /translation. Only after it has been converted to selenocysteyl-tRNAsec does it recognize UGA. Then a /selenocysteine residue is inserted. tRNAsec is essential for synthesizing active selenoproteins, of which / E. coli has three |CITS: [1702199]|. / // UNIQUE-ID - SER-tRNAs TYPES - tRNAs COMMON-NAME - tRNAser SYNONYMS - TRNA(SER) // UNIQUE-ID - THR-tRNAs TYPES - tRNAs COMMON-NAME - tRNAthr SYNONYMS - TRNA(THR) // UNIQUE-ID - Thymine-Containing-tRNAs TYPES - tRNAs COMMENT - This compound class collects tRNA species that contain thymine, generally as the result of enzymatic modification. SYNONYMS - a tRNA containing thymine SYNONYMS - tRNA containing thymine // UNIQUE-ID - tRNA-Containing-Guanine TYPES - tRNAs COMMON-NAME - tRNA containing guanine // UNIQUE-ID - tRNA-Containing-Queuine TYPES - tRNAs COMMON-NAME - tRNA containing queuine // UNIQUE-ID - tRNA-precursors TYPES - tRNAs COMMON-NAME - a tRNA precursor // UNIQUE-ID - TRP-tRNAs TYPES - tRNAs COMMON-NAME - tRNAtrp SYNONYMS - TRNA(TRP) // UNIQUE-ID - TYR-tRNAs TYPES - tRNAs COMMON-NAME - tRNAtyr SYNONYMS - TRNA(TYR) // UNIQUE-ID - VAL-tRNAs TYPES - tRNAs COMMON-NAME - tRNAval SYNONYMS - TRNA(VAL) // UNIQUE-ID - 23S-rRNA-5-Methyl-Uridines TYPES - 23S-rRNAs COMMON-NAME - 5-methyluridine-modified 23S ribosomal RNA COMMENT - This compound class stands for generic and unspecified 23S-rRNA 5-methyluridines. SYNONYMS - a 23S-rRNA 5-methyluridine SYNONYMS - 23S-rRNA 5-methyluridine // UNIQUE-ID - 23S-rRNA-Methyl-G2251s TYPES - 23S-rRNAs COMMENT - This compound class stands for generic and unspecified 23S-rRNAs with the guanine at position 2251 methylated. SYNONYMS - 23S-rRNA methyl G2251 SYNONYMS - 23S ribosomal RNA methylated at position G2251 // UNIQUE-ID - BCAA-dehydrogenase-2MB-DH-lipoyl TYPES - Branched-ketoacid-E2 COMMON-NAME - enzyme N6-(S-[2-methylbutanoyl]dihydrolipoyl)lysine // UNIQUE-ID - BCAA-dehydrogenase-2MP-DH-lipoyl TYPES - Branched-ketoacid-E2 COMMON-NAME - lipoamide acyltransferase N6-(S-[2-methylpropanoyl]dihydrolipoyl)lysine // UNIQUE-ID - BCAA-dehydrogenase-3MB-DH-lipoyl TYPES - Branched-ketoacid-E2 COMMON-NAME - enzyme N6-(S-[3-methylbutanoyl]dihydrolipoyl)lysine // UNIQUE-ID - BCAA-dehydrogenase-DH-lipoyl TYPES - Branched-ketoacid-E2 COMMON-NAME - lipoamide acyltransferase N6-(dihydrolipoyl)lysine // UNIQUE-ID - BCAA-dehydrogenase-lipoyl TYPES - Branched-ketoacid-E2 COMMON-NAME - lipoamide acyltransferase N6-(lipoyl)lysine // UNIQUE-ID - AMINOMETHYLDIHYDROLIPOYL-GCVH TYPES - Gcv-H COMMON-NAME - H-protein-S-(aminomethyldihydrolipoyl)lysine // UNIQUE-ID - DIHYDROLIPOYL-GCVH TYPES - Gcv-H COMMON-NAME - H-Gcv-protein-(dihydrolipoyl)lysine // UNIQUE-ID - PROTEIN-LIPOYLLYSINE TYPES - Gcv-H COMMON-NAME - H-Gcv-protein-(lipoyl)lysine // UNIQUE-ID - Oxo-glutarate-dehydro-suc-DH-lipoyl TYPES - Oxo-glutarate-E2 COMMON-NAME - dihydrolipoyltranssuccinylase N6-(S-succinyldihydrolipoyl)lysine // UNIQUE-ID - Oxo-glutarate-dehydrogenase-DH-lipoyl TYPES - Oxo-glutarate-E2 COMMON-NAME - dihydrolipoyltranssuccinylase N6-(dihydrolipoyl)lysine // UNIQUE-ID - Oxo-glutarate-dehydrogenase-lipoyl TYPES - Oxo-glutarate-E2 COMMON-NAME - dihydrolipoyltranssuccinylase N6-(lipoyl)lysine // UNIQUE-ID - Pyruvate-dehydrogenase-acetylDHlipoyl TYPES - Pyruvate-E2 COMMON-NAME - lipoate acetyltransferase N6-(S-acetyldihydrolipoyl)lysine SYNONYMS - enzyme N6-(S-acetyldihydrolipoyl)lysine // UNIQUE-ID - Pyruvate-dehydrogenase-dihydrolipoate TYPES - Pyruvate-E2 COMMON-NAME - lipoate acetyltransferase N6-(dihydrolipoyl)lysine SYNONYMS - enzyme N6-(dihydrolipoyl)lysine // UNIQUE-ID - Pyruvate-dehydrogenase-lipoate TYPES - Pyruvate-E2 COMMON-NAME - lipoate acetyltransferase N6-(lipoyl)lysine SYNONYMS - enzyme N6-(lipoyl)lysine // UNIQUE-ID - Apo-AsbD-Proteins TYPES - Aryl-Carrier-Proteins COMMON-NAME - an apo-AsbD protein COMMENT - AsbD is an aryl-carrier protein that activates |FRAME: 3-4-DIHYDROXYBENZOATE| prior to its incorporation into |FRAME: CPD-9985|. /The AsbD protein itself needs to be activated by the transfer of a |FRAME: PANTETHEINE-P| group from |FRAME: CO-A| to serine 40 of the apo form, resulting in the active holo form, in a manner similar to other acyl- and aryl-carrier proteins. / /The AsbC protein catalyzes the adenylation of |FRAME: 3-4-DIHYDROXYBENZOATE|, followed by the transfer of the adenylated intermediate to the holo-asbD protein, resulting in |FRAME: 34-DHB-AsbD-Proteins| |CITS: [17346033]|. / /Once activated, the |FRAME: 3-4-DIHYDROXYBENZOATE| moiety can be transferred by AsbE from |FRAME: 34-DHB-AsbD-Proteins| to different receipient molecules, including |FRAME: CPD-11479|, |FRAME: CPD-11480| and |FRAME: CPD-11481| |CITS: [18758617]|. // UNIQUE-ID - NPRS-Aryl-Carrier-Proteins TYPES - Aryl-Carrier-Proteins COMMON-NAME - an NRPS containing an [aryl-carrier-protein] domain // UNIQUE-ID - NRPS-PCP-Proteins TYPES - Peptidyl-Carrier-Proteins COMMON-NAME - an NRPS containing a [peptidyl-carrier-protein] domain COMMENT - Nonribosomal peptide synthetases (NRPSs) are typically polyfunctional modular megasynthases found /mainly in prokaryotes and lower eukaryotes, and participate in assembly line biosynthesis of /peptide-based natural products, such as the antibiotic vancomycin and the siderophore enterobactin. /The minimal NRPS module consists of condensation, adenylation, and peptidyl carrier protein /(PCP) domains. / /The adenylation domain recognizes and activates the amino acid substrate through the formation of /an aminoacyl adenylate, followed by covalent binding of the activated amino acid as a thioester to the /|FRAME: PANTETHEINE-P| of the PCP domain. The condensation domain catalyzes peptide-bond /formation between 2 adjacent modules by facilitating the attack of an upstream peptidyl-PCP donor /by a downstream chain-elongation unit, an aminoacyl-PCP acceptor nucleophile. / /PCPs are not limited to NRPSs. For example, D-alanyl carrier protein (Dcp) is a discrete PCP that /contributes to the peptidoglycan cell wall of Gram-positive bacteria, and is required for the formation of /D-alanyl-lipoteichoic acid |CITS: [18059524]|. // UNIQUE-ID - Actinorhodin-PKS-ACP-Protein TYPES - Polyketide-ACP-Proteins COMMON-NAME - an actinorhodin polyketide synthase [acp]-like protein // UNIQUE-ID - Cytochromes-B-Reduced TYPES - Cytochromes-B COMMON-NAME - a reduced cytochrome b COMMENT - This compound class stands for generic and unspecified, reduced Cytochrome B proteins. SYNONYMS - cytb proteins-2e // UNIQUE-ID - Cytochromes-b5 TYPES - Cytochromes-B COMMON-NAME - a cytochrome b5 // UNIQUE-ID - Cytochromes-B556 TYPES - Cytochromes-B COMMON-NAME - cytochrome b556 // UNIQUE-ID - Cytochromes-B561 TYPES - Cytochromes-B // UNIQUE-ID - FERRICYTOCHROME-B1 TYPES - Cytochromes-B COMMON-NAME - a ferricytochrome b1 SYNONYMS - oxidized cytochrome b1 SYNONYMS - cytochrome b1 oxidized // UNIQUE-ID - Apocytochromes-c TYPES - Cytochromes-c COMMON-NAME - an apocytochrome c // UNIQUE-ID - Cytochromes-C-Oxidized TYPES - Oxidized-cytochromes TYPES - Cytochromes-c COMMON-NAME - an oxidized cytochrome c COMMENT - In cytochromes c the haem is covalently attached to thiol groups of a Cys-Xaa-Xaa-Cys-His motif. / / /This compound class stands for generic and unspecified cytochrome c proteins. /In this class, the cytochromes c are in their standard, non-reduced form. SYNONYMS - Cytochrome C protein SYNONYMS - a Cytochrome C protein SYNONYMS - ferricytochrome c // UNIQUE-ID - Cytochromes-C-Reduced TYPES - Reduced-cytochromes TYPES - Cytochromes-c COMMON-NAME - a reduced cytochrome c COMMENT - When unmodifed haem is present as an enzyme cofactor, the cytochromes are referred to as /b-type, but if the haem is covalently attached to thiol groups of a Cys-Xaa-Xaa-Cys-His motif, /then the cytochrome is a c-type. / /This compound class stands for generic and unspecified, reduced cytochrome c proteins. SYNONYMS - a reduced Cytochrome C protein SYNONYMS - reduced Cytochrome C protein // UNIQUE-ID - Cytochromes-D-Reduced TYPES - Cytochromes-D COMMON-NAME - a reduced cytochrome d COMMENT - This compound class stands for generic and unspecified, reduced Cytochrome D proteins. SYNONYMS - a reduced Cytochrome D protein SYNONYMS - reduced Cytochrome D protein SYNONYMS - cytD proteins-2e // UNIQUE-ID - Oxidized-Cytochromes-o TYPES - Cytochromes-o COMMON-NAME - an oxidized cytochrome o // UNIQUE-ID - Reduced-Cytochromes-o TYPES - Cytochromes-o COMMON-NAME - a reduced cytochrome o // UNIQUE-ID - Oxidized-adrenal-ferredoxins TYPES - Oxidized-ferredoxins COMMON-NAME - an oxidized adrenal ferredoxin // UNIQUE-ID - Reduced-adrenal-ferredoxins TYPES - Reduced-ferredoxins COMMON-NAME - a reduced adrenal ferredoxin // UNIQUE-ID - Flavodoxins-Semiquinones TYPES - Flavodoxin COMMON-NAME - a flavodoxin semiquinone // UNIQUE-ID - Reduced-flavodoxins TYPES - Flavodoxin COMMON-NAME - a reduced flavodoxin COMMENT - Flavodoxin (Fld) is a soluble electron shuttle flavoprotein (it binds a flavin mononucleotide) that is /isofunctional with ferredoxin (Fd). In photosynthetic organisms flavodoxin is reduced by the terminal /electron acceptors of |FRAME: CPLX490-3509|. / /Fd and Fld are involved in multiple redox reactions. They can both sustain cyclic as well as linear electron /flow. The cyclic electron flow creates a proton gradient across the photosynthetic membrane and allows /ATP synthesis independent of photosystem II activity. /Linear electron flow, on the other hand, utilizes electrons from the reduced Fd and Fld for NADP+ /reduction in a reaction catalyzed by |FRAME: SYNPCC7942_0978-MONOMER| (FNR). /The source of electrons during linear electron flow is the dissociation of water by /|FRAME: CPLX490-3506|. / /Fd serves also as an electron donor to a number of soluble enzymes involved in nitrogen metabolism, /sulfur metabolism and the regulation of carbon metabolism. Fld can substitute Fd under conditions of /iron deprivation in most cyanobacteria and some algae and may be efficient in reducing most or all of /these soluble enzymes |CITS: [11687213]|. // UNIQUE-ID - Ox-FAD-Flavoproteins TYPES - Oxidized-Flavoproteins COMMENT - This compound class stands for generic and unspecified flavoproteins containing FAD. In this class, the flavoproteins are in their standard, non-reduced form. SYNONYMS - an oxidized flavoprotein (FAD) SYNONYMS - oxidized flavoprotein (FAD) SYNONYMS - flavoprotein (FAD) // UNIQUE-ID - Ox-FMN-Flavoproteins TYPES - Oxidized-Flavoproteins COMMENT - This compound class stands for generic and unspecified flavoproteins containing FMN. In this class, the flavoproteins are in their standard, non-reduced form. SYNONYMS - an oxidized flavoprotein (FMN) SYNONYMS - oxidized flavoprotein (FMN) SYNONYMS - flavoprotein (FMN) // UNIQUE-ID - Red-FADH2-Flavoproteins TYPES - Reduced-Flavoproteins COMMENT - This compound class stands for generic and unspecified flavoproteins containing FADH2. In this class, the flavoproteins are in their reduced form. SYNONYMS - a reduced flavoprotein (FADH2) SYNONYMS - reduced flavoprotein (FADH2) SYNONYMS - flavoprotein (FADH2) // UNIQUE-ID - Red-FMNH2-Flavoproteins TYPES - Reduced-Flavoproteins COMMENT - This compound class stands for generic and unspecified flavoproteins containing FMNH2. In this class, the flavoproteins are in their reduced form. SYNONYMS - a reduced flavoprotein (FMNH2) SYNONYMS - reduced flavoprotein (FMNH2) SYNONYMS - flavoprotein (FMNH2) // UNIQUE-ID - Oxidized-Azurins TYPES - Azurins COMMON-NAME - an oxidized azurin SYNONYMS - azurinox // UNIQUE-ID - Reduced-Azurins TYPES - Azurins COMMON-NAME - a reduced azurin SYNONYMS - azurinred // UNIQUE-ID - Oxidized-NrdH-Proteins TYPES - NrdH-Glutaredoxin-like-Proteins COMMON-NAME - an oxidized NrdH glutaredoxin-like protein // UNIQUE-ID - Reduced-NrdH-Proteins TYPES - NrdH-Glutaredoxin-like-Proteins COMMON-NAME - a reduced NrdH glutaredoxin-like protein // UNIQUE-ID - Red-thioredoxins-1 TYPES - Red-Thioredoxin TYPES - Thioredoxin-A COMMON-NAME - a reduced thioredoxin 1 // UNIQUE-ID - Red-thioredoxins-2 TYPES - Red-Thioredoxin TYPES - Thioredoxin-B COMMON-NAME - a reduced thioredoxin 2 // UNIQUE-ID - Red-thioredoxins-3 TYPES - Thioredoxin-C TYPES - Red-Thioredoxin COMMON-NAME - a reduced thioredoxin 3 // UNIQUE-ID - GO:0004918 TYPES - GO:0004907 TYPES - GO:0016494 TYPES - GO:0019959 COMMON-NAME - interleukin-8 receptor activity SYNONYMS - IL-8R // UNIQUE-ID - GO:0004507 TYPES - GO:0008395 TYPES - GO:0016713 COMMON-NAME - steroid 11-beta-monooxygenase activity SYNONYMS - cytochrome P450 CYP11B1 SYNONYMS - cytochrome P450 CYP11B2 SYNONYMS - cytochrome p450 XIB1 activity SYNONYMS - oxygenase, steroid 11beta -mono- SYNONYMS - steroid 11-beta-hydroxylase activity SYNONYMS - steroid 11-beta/18-hydroxylase activity SYNONYMS - steroid 11beta-hydroxylase activity SYNONYMS - steroid 11beta-monooxygenase activity SYNONYMS - steroid 11beta/18-hydroxylase activity SYNONYMS - steroid,reduced-adrenal-ferredoxin:oxygen oxidoreductase (11beta-hydroxylating) // UNIQUE-ID - GO:0008123 TYPES - GO:0008395 TYPES - GO:0016709 COMMON-NAME - cholesterol 7-alpha-monooxygenase activity SYNONYMS - cholesterol 7-alpha-hydroxylase activity SYNONYMS - cholesterol 7alpha-hydroxylase activity SYNONYMS - cholesterol 7alpha-monooxygenase activity SYNONYMS - cholesterol,NADPH:oxygen oxidoreductase (7alpha-hydroxylating) SYNONYMS - cytochrome P450 CYP7A1 // UNIQUE-ID - GO:0008386 TYPES - GO:0008395 TYPES - GO:0016713 COMMON-NAME - cholesterol monooxygenase (side-chain-cleaving) activity SYNONYMS - C27-side chain cleavage enzyme SYNONYMS - cholesterol 20-22-desmolase activity SYNONYMS - cholesterol C(20-22) desmolase activity SYNONYMS - cholesterol C20-22 desmolase activity SYNONYMS - cholesterol desmolase activity SYNONYMS - cholesterol side-chain cleavage enzyme activity SYNONYMS - cholesterol side-chain-cleaving enzyme activity SYNONYMS - cholesterol,reduced-adrenal-ferredoxin:oxygen oxidoreductase (side-chain-cleaving) SYNONYMS - Cyp11a1 SYNONYMS - cytochrome P-450(scc) activity SYNONYMS - cytochrome P-450scc SYNONYMS - cytochrome p450(scc) activity SYNONYMS - cytochrome p450scc SYNONYMS - desmolase, steroid 20-22 SYNONYMS - enzymes, cholesterol side-chain-cleaving SYNONYMS - steroid 20-22 desmolase activity SYNONYMS - steroid 20-22-lyase activity // UNIQUE-ID - GO:0000254 TYPES - GO:0016709 COMMON-NAME - C-4 methylsterol oxidase activity COMMENT - Note that zymosterol is cholesta-8,24-dien-3-ol. SYNONYMS - methylsterol hydroxylase activity SYNONYMS - methylsterol monooxygenase activity SYNONYMS - 4-methylsterol oxidase activity // UNIQUE-ID - GO:0004498 TYPES - GO:0016709 COMMON-NAME - calcidiol 1-monooxygenase activity SYNONYMS - 1-hydroxylase-25-hydroxyvitamin D3 SYNONYMS - 25-hydroxy D3-1alpha-hydroxylase activity SYNONYMS - 25-hydroxy vitamin D3 1-alpha-hydroxylase activity SYNONYMS - 25-hydroxycholecalciferol 1-hydroxylase activity SYNONYMS - 25-hydroxycholecalciferol 1-monooxygenase activity SYNONYMS - 25-hydroxycholecalciferol 1alpha-hydroxylase activity SYNONYMS - 25-hydroxycholecalciferol-1-hydroxylase activity SYNONYMS - 25-hydroxyvitamin D-1 alpha hydroxylase activity SYNONYMS - 25-hydroxyvitamin D3 1alpha-hydroxylase activity SYNONYMS - 25-OHD-1 alpha-hydroxylase activity SYNONYMS - calcidiol,NADPH:oxygen oxidoreductase (1-hydroxylating) SYNONYMS - cytochrome P450 CYP27B // UNIQUE-ID - GO:0004499 TYPES - GO:0016709 COMMON-NAME - dimethylaniline monooxygenase (N-oxide-forming) activity // UNIQUE-ID - GO:0004502 TYPES - GO:0016709 COMMON-NAME - kynurenine 3-monooxygenase activity SYNONYMS - kynurenine 3-hydroxylase activity SYNONYMS - kynurenine hydroxylase activity SYNONYMS - L-kynurenine,NADPH:oxygen oxidoreductase (3-hydroxylating) SYNONYMS - L-kynurenine-3-hydroxylase activity // UNIQUE-ID - GO:0047749 TYPES - GO:0016709 COMMON-NAME - cholestanetriol 26-monooxygenase activity SYNONYMS - 5-beta-cholestane-3-alpha,7-alpha,12-alpha-triol 26-hydroxylase activity SYNONYMS - 5-beta-cholestane-3-alpha,7-alpha,12-alpha-triol hydroxylase activity SYNONYMS - 5beta-cholestane-3alpha,7alpha,12alpha-triol 26-hydroxylase activity SYNONYMS - 5beta-cholestane-3alpha,7alpha,12alpha-triol hydroxylase activity SYNONYMS - 5beta-cholestane-3alpha,7alpha,12alpha-triol,NADPH:oxygen oxidoreductase (26-hydroxylating) SYNONYMS - cholestanetriol 26-hydroxylase activity SYNONYMS - cholesterol 27-hydroxylase activity SYNONYMS - CYP27A SYNONYMS - CYP27A1 SYNONYMS - cytochrome P450 27A1' activity SYNONYMS - sterol 26-hydroxylase activity SYNONYMS - sterol 27-hydroxylase activity // UNIQUE-ID - GO:0050051 TYPES - GO:0016709 COMMON-NAME - leukotriene-B4 20-monooxygenase activity SYNONYMS - (6Z,8E,10E,14Z)-(5S,12R)-5,12-dihydroxyicosa-6,8,10,14-tetraenoate,NADPH:oxygen oxidoreductase (20-hydroxylating) SYNONYMS - leucotriene-B4 omega-hydroxylase activity SYNONYMS - leukotriene-B(4) 20-hydroxylase activity SYNONYMS - leukotriene-B(4) omega-hydroxylase activity SYNONYMS - leukotriene-B4 20-hydroxylase activity SYNONYMS - leukotriene-B4 omega-hydroxylase activity SYNONYMS - LTB(4) 20-hydroxylase activity SYNONYMS - LTB(4) omega-hydroxylase activity SYNONYMS - LTB4 20-hydroxylase activity SYNONYMS - LTB4 omega-hydroxylase activity // UNIQUE-ID - GO:0050381 TYPES - GO:0016712 COMMON-NAME - unspecific monooxygenase activity SYNONYMS - aromatase activity SYNONYMS - aryl hydrocarbon hydroxylase activity SYNONYMS - aryl-4-monooxygenase activity SYNONYMS - cytochrome p450 activity SYNONYMS - cytochrome P450 CYP19 SYNONYMS - estrogen synthetase activity SYNONYMS - flavoprotein monooxygenase activity SYNONYMS - flavoprotein-linked monooxygenase activity SYNONYMS - microsomal monooxygenase activity SYNONYMS - microsomal P-450 SYNONYMS - microsomal p450 activity SYNONYMS - substrate,reduced-flavoprotein:oxygen oxidoreductase (RH-hydroxylating or -epoxidizing) SYNONYMS - xenobiotic monooxygenase activity // UNIQUE-ID - GO:0018685 TYPES - GO:0016713 COMMON-NAME - alkane 1-monooxygenase activity SYNONYMS - 1-hydroxylase activity SYNONYMS - alkane 1-hydroxylase activity SYNONYMS - alkane hydroxylase activity SYNONYMS - alkane monooxygenase activity SYNONYMS - alkane,reduced-rubredoxin:oxygen 1-oxidoreductase activity SYNONYMS - fatty acid omega-hydroxylase activity SYNONYMS - lauric acid omega-hydroxylase activity SYNONYMS - omega-hydroxylase activity // UNIQUE-ID - GO:0047783 TYPES - GO:0016713 COMMON-NAME - corticosterone 18-monooxygenase activity SYNONYMS - corticosterone 18-hydroxylase activity SYNONYMS - corticosterone methyl oxidase activity SYNONYMS - corticosterone,reduced-adrenal-ferredoxin:oxygen oxidoreductase (18-hydroxylating) // UNIQUE-ID - GO:0004505 TYPES - GO:0016714 COMMON-NAME - phenylalanine 4-monooxygenase activity SYNONYMS - L-phenylalanine,tetrahydrobiopterin:oxygen oxidoreductase (4-hydroxylating) SYNONYMS - PAH activity SYNONYMS - phenylalaninase activity SYNONYMS - phenylalanine 4-hydroxylase activity SYNONYMS - phenylalanine hydroxylase activity // UNIQUE-ID - GO:0004510 TYPES - GO:0016714 COMMON-NAME - tryptophan 5-monooxygenase activity SYNONYMS - indoleacetic acid-5-hydroxylase activity SYNONYMS - L-tryptophan hydroxylase activity SYNONYMS - L-tryptophan,tetrahydrobiopterin:oxygen oxidoreductase (5-hydroxylating) SYNONYMS - tryptophan 5-hydroxylase activity SYNONYMS - tryptophan hydroxylase activity // UNIQUE-ID - GO:0004511 TYPES - GO:0016714 COMMON-NAME - tyrosine 3-monooxygenase activity SYNONYMS - tyrosine 3-hydroxylase activity SYNONYMS - tyrosine hydroxylase // UNIQUE-ID - GO:0004500 TYPES - GO:0016715 COMMON-NAME - dopamine beta-monooxygenase activity SYNONYMS - dopamine b-hydroxylase activity // UNIQUE-ID - GO:0004504 TYPES - GO:0016715 COMMON-NAME - peptidylglycine monooxygenase activity SYNONYMS - PAM activity SYNONYMS - PAM-A SYNONYMS - PAM-B SYNONYMS - peptide alpha-amidating enzyme SYNONYMS - peptide alpha-amide synthase activity SYNONYMS - peptide-alpha-amide synthetase activity SYNONYMS - peptidyl alpha-amidating enzyme activity SYNONYMS - peptidylglycine 2-hydroxylase activity SYNONYMS - peptidylglycine alpha-amidating monooxygenase activity SYNONYMS - peptidylglycine alpha-hydroxylase activity SYNONYMS - peptidylglycine,ascorbate:oxygen oxidoreductase (2-hydroxylating) SYNONYMS - synthase, peptide alpha-amide // UNIQUE-ID - GO:0004503 TYPES - GO:0016716 COMMON-NAME - monophenol monooxygenase activity SYNONYMS - catecholase SYNONYMS - chlorogenic acid oxidase activity SYNONYMS - chlorogenic oxidase activity SYNONYMS - cresolase activity SYNONYMS - dopa oxidase SYNONYMS - monophenol dihydroxyphenylalanine:oxygen oxidoreductase activity SYNONYMS - monophenol monooxidase activity SYNONYMS - monophenol oxidase activity SYNONYMS - monophenol oxygenase SYNONYMS - monophenol, dihydroxy-L-phenylalanine oxygen oxidoreductase activity SYNONYMS - monophenol,L-dopa:oxygen oxidoreductase activity SYNONYMS - monophenolase activity SYNONYMS - N-acetyl-6-hydroxytryptophan oxidase activity SYNONYMS - o-diphenol oxidase activity SYNONYMS - o-diphenol oxidoreductase SYNONYMS - o-diphenol:O2 oxidoreductase activity SYNONYMS - o-diphenol:oxygen oxidoreductase SYNONYMS - phenol oxidase activity SYNONYMS - phenolase activity SYNONYMS - polyaromatic oxidase activity SYNONYMS - polyphenolase activity SYNONYMS - prophenol oxidase SYNONYMS - pyrocatechol oxidase SYNONYMS - tyrosinase activity SYNONYMS - tyrosine-dopa oxidase activity // UNIQUE-ID - GO:0030338 TYPES - GO:0016716 COMMON-NAME - CMP-N-acetylneuraminate monooxygenase activity COMMENT - Note that this was EC:1.14.13.45. SYNONYMS - CMP-N-acetylneuraminate hydroxylase activity SYNONYMS - CMP-N-acetylneuraminate,ferrocytochrome-b5:oxygen oxidoreductase (N-acetyl-hydroxylating) SYNONYMS - CMP-N-acetylneuraminic acid hydroxylase activity SYNONYMS - CMP-Neu5Ac hydroxylase activity SYNONYMS - cytidine monophosphoacetylneuraminate monooxygenase activity SYNONYMS - cytidine-5'-monophosphate-N-acetylneuraminic acid hydroxylase activity SYNONYMS - N-acetylneuraminic monooxygenase activity // UNIQUE-ID - GO:0047006 TYPES - GO:0033764 COMMON-NAME - 20-alpha-hydroxysteroid dehydrogenase activity SYNONYMS - 20alpha-HSD SYNONYMS - 20alpha-HSDH SYNONYMS - 20alpha-hydroxy steroid dehydrogenase activity SYNONYMS - 20alpha-hydroxysteroid dehydrogenase SYNONYMS - 20alpha-hydroxysteroid:NAD(P)+ 20-oxidoreductase activity // UNIQUE-ID - GO:0047042 TYPES - GO:0033764 COMMON-NAME - 3-alpha-hydroxysteroid dehydrogenase (B-specific) activity SYNONYMS - 3-alpha-HSD activity SYNONYMS - 3alpha-HSD SYNONYMS - 3alpha-hydroxysteroid dehydrogenase (B-specific) SYNONYMS - 3alpha-hydroxysteroid oxidoreductase activity SYNONYMS - 3alpha-hydroxysteroid:NAD(P)+ oxidoreductase (B-specific) SYNONYMS - hydroxyprostaglandin dehydrogenase activity SYNONYMS - sterognost 3alpha // UNIQUE-ID - GO:0050327 TYPES - GO:0033764 COMMON-NAME - testosterone 17-beta-dehydrogenase activity SYNONYMS - 17-beta-HSD activity SYNONYMS - 17-ketoreductase activity SYNONYMS - 17beta-HSD SYNONYMS - 17beta-hydroxysteroid:NAD+ 17-oxidoreductase activity SYNONYMS - testosterone 17b-dehydrogenase activity SYNONYMS - testosterone 17beta-dehydrogenase activity // UNIQUE-ID - GO:0047568 TYPES - GO:0033765 COMMON-NAME - 3-oxo-5-beta-steroid 4-dehydrogenase activity SYNONYMS - 3-oxo-5beta-steroid 4-dehydrogenase activity SYNONYMS - 3-oxo-5beta-steroid:(acceptor) delta4-oxidoreductase activity SYNONYMS - 3-oxo-5beta-steroid:acceptor delta4-oxidoreductase activity SYNONYMS - delta4-3-ketosteroid 5-beta-reductase activity // UNIQUE-ID - GO:0004470 TYPES - GO:0016615 COMMON-NAME - malic enzyme activity SYNONYMS - pyruvic-malic carboxylase activity // UNIQUE-ID - GO:0030060 TYPES - GO:0016615 TYPES - GO:0016616 COMMON-NAME - L-malate dehydrogenase activity SYNONYMS - (S)-malate:NAD+ oxidoreductase activity SYNONYMS - L-malate-NAD+ oxidoreductase activity SYNONYMS - malate (NAD) dehydrogenase activity SYNONYMS - malic acid dehydrogenase activity SYNONYMS - malic dehydrogenase activity SYNONYMS - MDH SYNONYMS - NAD-dependent malate dehydrogenase activity SYNONYMS - NAD-dependent malic dehydrogenase activity SYNONYMS - NAD-L-malate dehydrogenase activity SYNONYMS - NAD-linked malate dehydrogenase activity SYNONYMS - NAD-malate dehydrogenase activity SYNONYMS - NAD-malic dehydrogenase activity SYNONYMS - NAD-specific malate dehydrogenase activity // UNIQUE-ID - GO:0004471 TYPES - GO:0004470 TYPES - GO:0016616 COMMON-NAME - malate dehydrogenase (decarboxylating) activity SYNONYMS - 'malic' enzyme SYNONYMS - (S)-malate:NAD+ oxidoreductase (decarboxylating) SYNONYMS - NAD-malic enzyme activity SYNONYMS - NAD-specific malic enzyme // UNIQUE-ID - GO:0004473 TYPES - GO:0004470 TYPES - GO:0016616 COMMON-NAME - malate dehydrogenase (oxaloacetate-decarboxylating) (NADP+) activity SYNONYMS - 'malic' enzyme SYNONYMS - (S)-malate:NADP+ oxidoreductase (oxaloacetate-decarboxylating) SYNONYMS - L-malate:NADP oxidoreductase activity SYNONYMS - malate dehydrogenase (decarboxylating, NADP) SYNONYMS - malate dehydrogenase (NADP, decarboxylating) SYNONYMS - NADP-linked decarboxylating malic enzyme SYNONYMS - NADP-malic enzyme activity SYNONYMS - NADP-specific malate dehydrogenase activity SYNONYMS - NADP-specific malic enzyme // UNIQUE-ID - GO:0016619 TYPES - GO:0004470 TYPES - GO:0016616 COMMON-NAME - malate dehydrogenase (oxaloacetate-decarboxylating) activity SYNONYMS - 'malic' enzyme SYNONYMS - (S)-malate:NAD+ oxidoreductase (oxaloacetate-decarboxylating) SYNONYMS - NAD-linked malic enzyme SYNONYMS - NAD-malic enzyme activity SYNONYMS - NAD-specific malic enzyme // UNIQUE-ID - GO:0003857 TYPES - GO:0016616 COMMON-NAME - 3-hydroxyacyl-CoA dehydrogenase activity COMMENT - See also 'long-chain-3-hydroxyacyl-CoA dehydrogenase activity ; GO:0016509'. SYNONYMS - beta-hydroxyacyl dehydrogenase activity SYNONYMS - beta-hydroxyacyl-coenzyme A synthetase activity SYNONYMS - beta-hydroxyacylcoenzyme A dehydrogenase activity SYNONYMS - beta-hydroxybutyrylcoenzyme A dehydrogenase activity SYNONYMS - beta-keto-reductase activity SYNONYMS - beta-ketoacyl-CoA reductase SYNONYMS - L-3-hydroxyacyl CoA dehydrogenase activity SYNONYMS - L-3-hydroxyacyl coenzyme A dehydrogenase activity // UNIQUE-ID - GO:0003858 TYPES - GO:0016616 COMMON-NAME - 3-hydroxybutyrate dehydrogenase activity SYNONYMS - D-beta-hydroxybutyrate dehydrogenase activity // UNIQUE-ID - GO:0003938 TYPES - GO:0016616 COMMON-NAME - IMP dehydrogenase activity SYNONYMS - IMP oxidoreductase activity SYNONYMS - IMP:NAD+ oxidoreductase activity SYNONYMS - inosinate dehydrogenase activity SYNONYMS - inosine 5'-monophosphate dehydrogenase activity SYNONYMS - inosine monophosphate dehydrogenase activity SYNONYMS - inosine monophosphate oxidoreductase activity SYNONYMS - inosine-5'-phosphate dehydrogenase activity SYNONYMS - inosinic acid dehydrogenase activity // UNIQUE-ID - GO:0004022 TYPES - GO:0016616 COMMON-NAME - alcohol dehydrogenase (NAD) activity SYNONYMS - alcohol dehydrogenase (NAD) activity // UNIQUE-ID - GO:0004033 TYPES - GO:0016616 COMMON-NAME - aldo-keto reductase activity // UNIQUE-ID - GO:0004090 TYPES - GO:0016616 COMMON-NAME - carbonyl reductase (NADPH) activity SYNONYMS - aldehyde reductase 1 SYNONYMS - aldehyde reductase I activity SYNONYMS - ALR3 SYNONYMS - carbonyl reductase activity SYNONYMS - NADPH-dependent carbonyl reductase activity SYNONYMS - NADPH2-dependent carbonyl reductase activity SYNONYMS - nonspecific NADPH-dependent carbonyl reductase activity SYNONYMS - prostaglandin 9-ketoreductase activity SYNONYMS - secondary-alcohol:NADP+ oxidoreductase activity SYNONYMS - xenobiotic ketone reductase activity // UNIQUE-ID - GO:0004316 TYPES - GO:0004312 TYPES - GO:0016616 COMMON-NAME - 3-oxoacyl-[acyl-carrier-protein] reductase activity SYNONYMS - (3R)-3-hydroxyacyl-acyl-carrier-protein:NADP+ oxidoreductase activity SYNONYMS - 3-ketoacyl acyl carrier protein reductase activity SYNONYMS - 3-oxoacyl-[acyl-carrier protein] reductase activity SYNONYMS - 3-oxoacyl-ACP reductase activity SYNONYMS - 3-oxoacyl-ACPreductase activity SYNONYMS - 3-oxoacyl-acyl-carrier-protein reductase activity SYNONYMS - beta-ketoacyl acyl carrier protein (ACP) reductase activity SYNONYMS - beta-ketoacyl reductase activity SYNONYMS - beta-ketoacyl thioester reductase activity SYNONYMS - beta-ketoacyl-ACP reductase activity SYNONYMS - beta-ketoacyl-acyl carrier protein reductase activity SYNONYMS - beta-ketoacyl-acyl-carrier protein(ACP) reductase activity SYNONYMS - NADPH-specific 3-oxoacyl-acylcarrier proteinreductase activity // UNIQUE-ID - GO:0004345 TYPES - GO:0016616 COMMON-NAME - glucose-6-phosphate dehydrogenase activity SYNONYMS - 6-phosphoglucose dehydrogenas SYNONYMS - 6-phosphoglucose dehydrogenase activity SYNONYMS - D-glucose 6-phosphate dehydrogenase activity SYNONYMS - D-glucose-6-phosphate:NADP+ 1-oxidoreductase activity SYNONYMS - Entner-doudoroff enzyme SYNONYMS - G6PD activity SYNONYMS - G6PDH SYNONYMS - GDH SYNONYMS - glucose 6-phosphate dehydrogenase (NADP) activity SYNONYMS - glucose-6-phosphate 1-dehydrogenase activity SYNONYMS - NADP-dependent glucose 6-phosphate dehydrogenase activity SYNONYMS - NADP-glucose-6-phosphate dehydrogenase activity SYNONYMS - Zwischenferment SYNONYMS - zwischenferment // UNIQUE-ID - GO:0004448 TYPES - GO:0016616 COMMON-NAME - isocitrate dehydrogenase activity SYNONYMS - beta-ketoglutaric-isocitric carboxylase activity SYNONYMS - IDH activity SYNONYMS - IDP activity SYNONYMS - IDP1 SYNONYMS - IDP2 SYNONYMS - IDP3 SYNONYMS - isocitric acid dehydrogenase activity SYNONYMS - isocitric dehydrogenase activity SYNONYMS - oxalosuccinate carboxylase activity SYNONYMS - oxalosuccinate decarboxylase activity SYNONYMS - oxalsuccinic decarboxylase activity // UNIQUE-ID - GO:0004745 TYPES - GO:0016616 COMMON-NAME - retinol dehydrogenase activity SYNONYMS - all-trans retinol dehydrogenase activity SYNONYMS - MDR SYNONYMS - microsomal retinol dehydrogenase activity SYNONYMS - retinene reductase activity SYNONYMS - retinol (vitamin A1) dehydrogenase activity SYNONYMS - retinol:NAD+ oxidoreductase activity // UNIQUE-ID - GO:0008114 TYPES - GO:0016616 COMMON-NAME - phosphogluconate 2-dehydrogenase activity SYNONYMS - 2-keto-6-phosphogluconate reductase activity SYNONYMS - 6-phospho-D-gluconate:NAD(P)+ 2-oxidoreductase activity SYNONYMS - 6-phosphogluconate 2-dehydrogenase activity SYNONYMS - 6-phosphogluconate dehydrogenase (NAD) SYNONYMS - 6-phosphogluconic dehydrogenase activity SYNONYMS - gluconate 6-phosphate dehydrogenase activity SYNONYMS - phosphogluconate dehydrogenase activity // UNIQUE-ID - GO:0008442 TYPES - GO:0016616 COMMON-NAME - 3-hydroxyisobutyrate dehydrogenase activity // UNIQUE-ID - GO:0016404 TYPES - GO:0016616 COMMON-NAME - 15-hydroxyprostaglandin dehydrogenase (NAD+) activity SYNONYMS - (5Z,13E)-(15S)-11alpha,15-dihydroxy-9-oxoprost-13-enoate:NAD+ 15-oxidoreductase activity SYNONYMS - 11alpha,15-dihydroxy-9-oxoprost-13-enoate:NAD+ 15-oxidoreductase activity SYNONYMS - 15-hydroxyprostaglandin dehydrogenase activity SYNONYMS - 15-hydroxyprostanoic dehydrogenase activity SYNONYMS - 15-OH-PGDH SYNONYMS - NAD+-dependent 15-hydroxyprostaglandin dehydrogenase (type I) SYNONYMS - NAD-specific 15-hydroxyprostaglandin dehydrogenase activity SYNONYMS - prostaglandin dehydrogenase activity // UNIQUE-ID - GO:0016509 TYPES - GO:0016616 COMMON-NAME - long-chain-3-hydroxyacyl-CoA dehydrogenase activity COMMENT - Also see '3-hydroxyacyl-CoA dehydrogenase activity ; GO:0003857'. SYNONYMS - beta-hydroxyacyl-CoA dehydrogenase activity SYNONYMS - LCHAD SYNONYMS - long-chain 3-hydroxyacyl coenzyme A dehydrogenase activity SYNONYMS - long-chain-(S)-3-hydroxyacyl-CoA:NAD+ oxidoreductase activity // UNIQUE-ID - GO:0030267 TYPES - GO:0016616 COMMON-NAME - glyoxylate reductase (NADP) activity SYNONYMS - glycolate:NADP+ oxidoreductase activity SYNONYMS - glyoxylate reductase (NADP+) SYNONYMS - NADPH-glyoxylate reductase activity // UNIQUE-ID - GO:0047012 TYPES - GO:0016616 COMMON-NAME - sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) activity SYNONYMS - 3-beta-hydroxy-4-alpha-methylcholestenecarboxylate 3-dehydrogenase (decarboxylating) activity SYNONYMS - 3-beta-hydroxy-4-beta-methylcholestenecarboxylate 3-dehydrogenase (decarboxylating) activity SYNONYMS - 3-beta-hydroxy-4-beta-methylcholestenoate dehydrogenase activity SYNONYMS - 3beta-hydroxy-4alpha-methylcholestenecarboxylate 3-dehydrogenase (decarboxylating) SYNONYMS - sterol 4-alpha-carboxylic decarboxylase activity // UNIQUE-ID - GO:0047015 TYPES - GO:0016616 COMMON-NAME - 3-hydroxy-2-methylbutyryl-CoA dehydrogenase activity SYNONYMS - (2S,3S)-3-hydroxy-2-methylbutanoyl-CoA:NAD+ oxidoreductase activity SYNONYMS - 2-methyl-3-hydroxy-butyryl CoA dehydrogenase activity SYNONYMS - 2-methyl-3-hydroxybutyryl coenzyme A dehydrogenase activity SYNONYMS - 2-methyl-3-hydroxybutyryl-CoA dehydrogenase activity // UNIQUE-ID - GO:0047560 TYPES - GO:0016616 COMMON-NAME - 3-dehydrosphinganine reductase activity SYNONYMS - 3-ketosphinganine reductase activity SYNONYMS - 3-oxosphinganine reductase activity SYNONYMS - 3-oxosphinganine:NADPH oxidoreductase activity SYNONYMS - D-3-dehydrosphinganine reductase activity SYNONYMS - D-3-oxosphinganine reductase activity SYNONYMS - D-3-oxosphinganine:B-NADPH oxidoreductase activity SYNONYMS - D-erythro-dihydrosphingosine:NADP+ 3-oxidoreductase activity SYNONYMS - DSR activity SYNONYMS - KTS reductase activity // UNIQUE-ID - GO:0047936 TYPES - GO:0016616 COMMON-NAME - glucose 1-dehydrogenase activity SYNONYMS - beta-D-glucose:NAD(P)+ 1-oxidoreductase activity SYNONYMS - D-glucose dehydrogenase (NAD(P)) SYNONYMS - hexose phosphate dehydrogenase activity // UNIQUE-ID - GO:0047939 TYPES - GO:0016616 COMMON-NAME - L-glucuronate reductase activity SYNONYMS - aldehyde reductase II activity SYNONYMS - D-glucuronate dehydrogenase activity SYNONYMS - D-glucuronate reductase activity SYNONYMS - glucuronate dehydrogenase activity SYNONYMS - glucuronate reductase activity SYNONYMS - NADP-L-gulonate dehydrogenase activity SYNONYMS - TPN-L-gulonate dehydrogenase activity // UNIQUE-ID - GO:0050038 TYPES - GO:0016616 COMMON-NAME - L-xylulose reductase activity // UNIQUE-ID - GO:0050093 TYPES - GO:0016616 COMMON-NAME - methanol dehydrogenase activity SYNONYMS - methanol:NAD+ oxidoreductase activity // UNIQUE-ID - GO:0050576 TYPES - GO:0016616 COMMON-NAME - 3-keto-steroid reductase activity SYNONYMS - 3-KSR activity SYNONYMS - 3beta-hydroxy-steroid:NADP+ 3-oxidoreductase // UNIQUE-ID - GO:0050577 TYPES - GO:0016616 COMMON-NAME - GDP-L-fucose synthase activity SYNONYMS - GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase activity SYNONYMS - GDP-fucose synthetase activity SYNONYMS - GDP-L-fucose:NADP+ 4-oxidoreductase (3,5-epimerizing) // UNIQUE-ID - GO:0051903 TYPES - GO:0016616 COMMON-NAME - S-(hydroxymethyl)glutathione dehydrogenase activity SYNONYMS - ADH3 activity SYNONYMS - chi-ADH activity SYNONYMS - class III alcohol dehydrogenase activity SYNONYMS - FDH activity SYNONYMS - formic dehydrogenase activity SYNONYMS - GD-FALDH activity SYNONYMS - glutathione-dependent formaldehyde dehydrogenase activity SYNONYMS - GS-FDH activity SYNONYMS - NAD- and glutathione-dependent formaldehyde dehydrogenase activity SYNONYMS - NAD-dependent formaldehyde dehydrogenase activity SYNONYMS - NAD-linked formaldehyde dehydrogenase activity SYNONYMS - S-(hydroxymethyl)glutathione:NAD+ oxidoreductase activity // UNIQUE-ID - GO:0047057 TYPES - GO:0016900 COMMON-NAME - vitamin-K-epoxide reductase (warfarin-sensitive) activity SYNONYMS - 2-methyl-3-phytyl-1,4-naphthoquinone:oxidized-dithiothreitol oxidoreductase activity SYNONYMS - phylloquinone epoxide reductase activity SYNONYMS - vitamin K1 epoxide reductase activity // UNIQUE-ID - GO:0008177 TYPES - GO:0000104 TYPES - GO:0016635 COMMON-NAME - succinate dehydrogenase (ubiquinone) activity SYNONYMS - complex II SYNONYMS - fumarate reductase complex (i.e. FRD, involved in anaerobic respiration, repressed in aerobic respiration) SYNONYMS - menaquinol: fumarate oxidoreductase activity SYNONYMS - quinol:fumarate oxidoreductase activity SYNONYMS - succinate dehydrogenase complex (i. e. SDH, involved in aerobic respiration, repressed in anaerobic respiration) SYNONYMS - succinate:ubiquinone oxidoreductase activity SYNONYMS - succinic dehydrogenase activity // UNIQUE-ID - GO:0004085 TYPES - GO:0003995 COMMON-NAME - butyryl-CoA dehydrogenase activity SYNONYMS - 3-hydroxyacyl CoA reductase activity SYNONYMS - butanoyl-CoA:(acceptor) 2,3-oxidoreductase activity SYNONYMS - butanoyl-CoA:acceptor 2,3-oxidoreductase activity SYNONYMS - butyryl coenzyme A dehydrogenase activity SYNONYMS - butyryl dehydrogenase activity SYNONYMS - enoyl-coenzyme A reductase activity SYNONYMS - ethylene reductase activity SYNONYMS - short-chain acyl CoA dehydrogenase activity SYNONYMS - short-chain acyl-coenzyme A dehydrogenase activity SYNONYMS - short-chain-acyl-CoA dehydrogenase activity SYNONYMS - unsaturated acyl coenzyme A reductase activity SYNONYMS - unsaturated acyl-CoA reductase activity // UNIQUE-ID - GO:0004361 TYPES - GO:0003995 COMMON-NAME - glutaryl-CoA dehydrogenase activity SYNONYMS - glutaryl coenzyme A dehydrogenase activity SYNONYMS - glutaryl-CoA:(acceptor) 2,3-oxidoreductase (decarboxylating) SYNONYMS - glutaryl-CoA:acceptor 2,3-oxidoreductase (decarboxylating) // UNIQUE-ID - GO:0004466 TYPES - GO:0003995 COMMON-NAME - long-chain-acyl-CoA dehydrogenase activity SYNONYMS - long-chain acyl-coenzyme A dehydrogenase activity SYNONYMS - long-chain-acyl-CoA:(acceptor) 2,3-oxidoreductase activity SYNONYMS - long-chain-acyl-CoA:acceptor 2,3-oxidoreductase activity SYNONYMS - palmitoyl-CoA dehydrogenase activity SYNONYMS - palmitoyl-coenzyme A dehydrogenase activity // UNIQUE-ID - GO:0008470 TYPES - GO:0003995 COMMON-NAME - isovaleryl-CoA dehydrogenase activity SYNONYMS - 3-methylbutanoyl-CoA:(acceptor) oxidoreductase activity SYNONYMS - 3-methylbutanoyl-CoA:acceptor oxidoreductase activity SYNONYMS - isovaleroyl-coenzyme A dehydrogenase activity SYNONYMS - isovaleryl-coenzyme A dehydrogenase activity // UNIQUE-ID - GO:0016937 TYPES - GO:0003995 COMMON-NAME - short-branched-chain-acyl-CoA dehydrogenase activity // UNIQUE-ID - GO:0004158 TYPES - GO:0004152 TYPES - GO:0016634 COMMON-NAME - dihydroorotate oxidase activity SYNONYMS - (DHO) dehydrogenase activity SYNONYMS - (S)-dihydroorotate:oxygen oxidoreductase activity SYNONYMS - 4,5-L-dihydroorotate:oxygen oxidoreductase activity SYNONYMS - DHOdehase activity SYNONYMS - dihydoorotic acid dehydrogenase activity // UNIQUE-ID - GO:0004074 TYPES - GO:0016628 COMMON-NAME - biliverdin reductase activity SYNONYMS - bilirubin:NAD(P)+ oxidoreductase activity // UNIQUE-ID - GO:0016631 TYPES - GO:0016628 COMMON-NAME - enoyl-[acyl-carrier-protein] reductase activity SYNONYMS - acyl-ACP dehydrogenase activity SYNONYMS - enoyl-[acyl-carrier protein] reductase activity SYNONYMS - enoyl-ACP reductase activity SYNONYMS - enoyl-acyl carrier protein reductase // UNIQUE-ID - GO:0017113 TYPES - GO:0016628 COMMON-NAME - dihydropyrimidine dehydrogenase (NADP+) activity SYNONYMS - 4,5-dihydrothymine: oxidoreductase activity SYNONYMS - 5,6-dihydrouracil:NADP+ 5-oxidoreductase activity SYNONYMS - dehydrogenase, dihydrouracil (nicotinamide adenine dinucleotide phosphate) SYNONYMS - DHPDH SYNONYMS - DHU dehydrogenase activity SYNONYMS - dihydropyrimidine dehydrogenase activity SYNONYMS - dihydrothymine dehydrogenase activity SYNONYMS - dihydrouracil dehydrogenase (NADP) SYNONYMS - dihydrouracil dehydrogenase (NADP+) activity SYNONYMS - DPD SYNONYMS - hydropyrimidine dehydrogenase activity // UNIQUE-ID - GO:0019166 TYPES - GO:0016628 COMMON-NAME - trans-2-enoyl-CoA reductase (NADPH) activity SYNONYMS - acyl-CoA:NADP+ trans-2-oxidoreductase activity SYNONYMS - NADPH-dependent trans-2-enoyl-CoA reductase activity SYNONYMS - reductase, trans-enoyl coenzyme A // UNIQUE-ID - GO:0047115 TYPES - GO:0016628 COMMON-NAME - trans-1,2-dihydrobenzene-1,2-diol dehydrogenase activity SYNONYMS - dihydrodiol dehydrogenase activity SYNONYMS - trans-1,2-dihydrobenzene-1,2-diol:NADP+ oxidoreductase activity // UNIQUE-ID - GO:0047522 TYPES - GO:0016628 COMMON-NAME - 15-oxoprostaglandin 13-oxidase activity SYNONYMS - (5Z)-(15S)-11alpha-hydroxy-9,15-dioxoprostanoate:NAD(P)+ delta13-oxidoreductase activity SYNONYMS - 15-ketoprostaglandin delta13-reductase activity SYNONYMS - 15-oxo-delta13-prostaglandin reductase activity SYNONYMS - 15-oxoprostaglandin 13-reductase activity SYNONYMS - delta13-15-ketoprostaglandin reductase activity SYNONYMS - prostaglandin 13-reductase activity SYNONYMS - prostaglandin delta13-reductase activity // UNIQUE-ID - GO:0047598 TYPES - GO:0016628 COMMON-NAME - 7-dehydrocholesterol reductase activity SYNONYMS - 7-DHC reductase activity SYNONYMS - cholesterol:NADP+ delta7-oxidoreductase activity SYNONYMS - sterol Delta(7)-reductase activity SYNONYMS - sterol delta7-reductase activity // UNIQUE-ID - GO:0050613 TYPES - GO:0016628 COMMON-NAME - delta14-sterol reductase activity COMMENT - Note that zymosterol is cholesta-8,24-dien-3-ol. SYNONYMS - 4,4-dimethyl-5alpha-cholesta-8,24-dien-3beta-ol:NADP+ delta14-oxidoreductase activity SYNONYMS - C-14 sterol reductase activity SYNONYMS - D14-sterol reductase activity SYNONYMS - sterol C-14 reductase activity SYNONYMS - sterol C14-reductase activity // UNIQUE-ID - GO:0003997 TYPES - GO:0016634 COMMON-NAME - acyl-CoA oxidase activity SYNONYMS - acyl coenzyme A oxidase activity SYNONYMS - acyl-CoA:oxygen 2-oxidoreductase activity SYNONYMS - fatty acyl-CoA oxidase activity SYNONYMS - fatty acyl-coenzyme A oxidase activity // UNIQUE-ID - GO:0004353 TYPES - GO:0016639 COMMON-NAME - glutamate dehydrogenase [NAD(P)+] activity COMMENT - Note that this term has a MetaCyc pathway reference as the pathway only has a single step. SYNONYMS - glutamate biosynthesis, using glutamate dehydrogenase (NAD(P)+) SYNONYMS - glutamate biosynthetic process, using glutamate dehydrogenase (NAD(P)+) SYNONYMS - glutamic dehydrogenase activity SYNONYMS - L-glutamate:NAD(P)+ oxidoreductase (deaminating) // UNIQUE-ID - GO:0008131 TYPES - GO:0016641 COMMON-NAME - amine oxidase activity SYNONYMS - adrenalin oxidase SYNONYMS - adrenaline oxidase activity SYNONYMS - amine oxidase (copper-containing) activity SYNONYMS - amine oxidase (flavin-containing) activity SYNONYMS - amine oxidase (pyridoxal containing) SYNONYMS - amine oxygen oxidoreductase activity SYNONYMS - amine:oxygen oxidoreductase (deaminating) (copper-containing) SYNONYMS - amine:oxygen oxidoreductase (deaminating) (flavin-containing) SYNONYMS - benzylamine oxidase SYNONYMS - Cu-amine oxidase activity SYNONYMS - DAO activity SYNONYMS - diamine oxidase activity SYNONYMS - diamine:O2 oxidoreductase (deaminating) SYNONYMS - diamino oxhydrase activity SYNONYMS - epinephrine oxidase SYNONYMS - histaminase activity SYNONYMS - histamine deaminase SYNONYMS - histamine oxidase SYNONYMS - MAO SYNONYMS - monoamine oxidase activity SYNONYMS - monoamine:O2 oxidoreductase (deaminating) SYNONYMS - semicarbazide-sensitive amine oxidase SYNONYMS - serotonin deaminase SYNONYMS - spermidine oxidase SYNONYMS - spermine oxidase SYNONYMS - SSAO SYNONYMS - tyraminase activity SYNONYMS - tyramine oxidase activity // UNIQUE-ID - GO:0015922 TYPES - GO:0016641 COMMON-NAME - aspartate oxidase activity // UNIQUE-ID - GO:0004486 TYPES - GO:0016646 COMMON-NAME - methylenetetrahydrofolate dehydrogenase activity SYNONYMS - N5,N10-methylenetetrahydrofolate dehydrogenase activity // UNIQUE-ID - GO:0004489 TYPES - GO:0016646 COMMON-NAME - methylenetetrahydrofolate reductase (NADPH) activity COMMENT - Includes EC 1.7.99.5. SYNONYMS - 1.7.99.5 SYNONYMS - 5,10-CH(2)-H(4)folate reductase activity SYNONYMS - 5,10-CH2-H4folate reductase activity SYNONYMS - 5,10-methylenetetrahydrofolate reductase (FADH(2)) activity SYNONYMS - 5,10-methylenetetrahydrofolate reductase (FADH) activity SYNONYMS - 5,10-methylenetetrahydrofolate reductase (FADH2) activity SYNONYMS - 5,10-methylenetetrahydrofolate reductase (NADPH) activity SYNONYMS - 5,10-methylenetetrahydrofolate reductase activity SYNONYMS - 5,10-methylenetetrahydrofolic acid reductase activity SYNONYMS - 5,10-methylenetetrahydropteroylglutamate reductase activity SYNONYMS - 5-methyltetrahydrofolate:(acceptor) oxidoreductase activity SYNONYMS - 5-methyltetrahydrofolate:NAD oxidoreductase activity SYNONYMS - 5-methyltetrahydrofolate:NAD(+) oxidoreductase activity SYNONYMS - 5-methyltetrahydrofolate:NAD(P)+ oxidoreductase activity SYNONYMS - 5-methyltetrahydrofolate:NAD+ oxidoreductase activity SYNONYMS - 5-methyltetrahydrofolate:NADP(+) oxidoreductase activity SYNONYMS - 5-methyltetrahydrofolate:NADP+ oxidoreductase activity SYNONYMS - MetF SYNONYMS - methylenetetrahydrofolate (reduced nicotinamide adenine dinucleotide phosphate) reductase activity SYNONYMS - methylenetetrahydrofolate (reduced riboflavin adenine dinucleotide) reductase activity SYNONYMS - methylenetetrahydrofolate reductase (NADPH(2)) activity SYNONYMS - methylenetetrahydrofolate reductase (NADPH2) SYNONYMS - methylenetetrahydrofolate reductase [NAD(P)H] SYNONYMS - methylenetetrahydrofolate reductase activity SYNONYMS - methylenetetrahydrofolic acid reductase activity SYNONYMS - MTHFR activity SYNONYMS - N(5),N(10)-methylenetetrahydrofolate reductase activity SYNONYMS - N(5,10)-methylenetetrahydrofolate reductase activity SYNONYMS - N5,10-methylenetetrahydrofolate reductase activity SYNONYMS - N5,N10-methylenetetrahydrofolate reductase activity // UNIQUE-ID - GO:0016155 TYPES - GO:0016646 COMMON-NAME - formyltetrahydrofolate dehydrogenase activity SYNONYMS - 10-formyl tetrahydrofolate:NADP oxidoreductase activity SYNONYMS - 10-formyl-H2PtGlu:NADP oxidoreductase activity SYNONYMS - 10-formyl-H4folate dehydrogenase activity SYNONYMS - 10-formyltetrahydrofolate dehydrogenase activity SYNONYMS - 10-formyltetrahydrofolate:NADP+ oxidoreductase activity SYNONYMS - N10-formyltetrahydrofolate dehydrogenase activity // UNIQUE-ID - GO:0046592 TYPES - GO:0016647 COMMON-NAME - polyamine oxidase activity SYNONYMS - 1-N-acetylspermidine:oxygen oxidoreductase (deaminating) SYNONYMS - N1-acetylspermidine:oxygen oxidoreductase (deaminating) // UNIQUE-ID - GO:0050031 TYPES - GO:0016647 COMMON-NAME - L-pipecolate oxidase activity SYNONYMS - L-pipecolate:oxygen 1,6-oxidoreductase activity SYNONYMS - L-pipecolic acid oxidase activity // UNIQUE-ID - GO:0050136 TYPES - GO:0003954 TYPES - GO:0016655 COMMON-NAME - NADH dehydrogenase (quinone) activity SYNONYMS - D-diaphorase activity SYNONYMS - DPNH-menadione reductase activity SYNONYMS - NADH-quinone oxidoreductase activity SYNONYMS - NADH:(quinone-acceptor) oxidoreductase activity SYNONYMS - reduced nicotinamide adenine dinucleotide (quinone) dehydrogenase activity // UNIQUE-ID - GO:0008746 TYPES - GO:0016652 COMMON-NAME - NAD(P) transhydrogenase activity SYNONYMS - energy-linked transhydrogenase SYNONYMS - H+-thase SYNONYMS - NAD transhydrogenase SYNONYMS - NADH transhydrogenase SYNONYMS - NADH-NADP-transhydrogenase SYNONYMS - NADPH-NAD oxidoreductase SYNONYMS - NADPH-NAD transhydrogenase SYNONYMS - NADPH:NAD+ transhydrogenase SYNONYMS - nicotinamide adenine dinucleotide (phosphate) transhydrogenase SYNONYMS - pyridine nucleotide transferase // UNIQUE-ID - GO:0003920 TYPES - GO:0016657 COMMON-NAME - GMP reductase activity COMMENT - Note that this function was formerly EC:1.6.6.8. SYNONYMS - guanosine 5'-monophosphate oxidoreductase activity SYNONYMS - guanosine 5'-monophosphate reductase activity SYNONYMS - guanosine 5'-phosphate reductase activity SYNONYMS - guanosine monophosphate reductase activity SYNONYMS - guanylate reductase activity SYNONYMS - inosine-5'-phosphate:NADP+ oxidoreductase (aminating) SYNONYMS - NADPH2:guanosine-5'-phosphate oxidoreductase (deaminating) SYNONYMS - NADPH:GMP oxidoreductase (deaminating) activity SYNONYMS - NADPH:guanosine-5'-phosphate oxidoreductase (deaminating) activity // UNIQUE-ID - GO:0016175 TYPES - GO:0050664 COMMON-NAME - superoxide-generating NADPH oxidase activity SYNONYMS - cytochrome B-245 // UNIQUE-ID - GO:0015035 TYPES - GO:0015036 COMMON-NAME - protein disulfide oxidoreductase activity SYNONYMS - protein disulphide oxidoreductase activity // UNIQUE-ID - GO:0030508 TYPES - GO:0015036 COMMON-NAME - thiol-disulfide exchange intermediate activity COMMENT - Note that the synonyms 'glutaredoxin' and 'thioredoxin' represent gene products that could be annotated using this term. SYNONYMS - glutaredoxin SYNONYMS - thiol-disulphide exchange intermediate activity SYNONYMS - thioredoxin // UNIQUE-ID - GO:0008482 TYPES - GO:0016670 COMMON-NAME - sulfite oxidase activity SYNONYMS - sulfite:oxygen oxidoreductase activity SYNONYMS - sulphite oxidase activity // UNIQUE-ID - GO:0016972 TYPES - GO:0016670 COMMON-NAME - thiol oxidase activity SYNONYMS - sulfhydryl oxidase activity SYNONYMS - thiol:oxygen oxidoreductase activity // UNIQUE-ID - GO:0008113 TYPES - GO:0016671 COMMON-NAME - peptide-methionine-(S)-S-oxide reductase activity SYNONYMS - methionine S-oxide reductase (S-form oxidizing) activity SYNONYMS - methionine S-oxide reductase activity SYNONYMS - methionine sulfoxide (protein) reductase activity SYNONYMS - methionine sulfoxide reductase A activity SYNONYMS - methionine sulfoxide reductase activity SYNONYMS - methionine sulphoxide reductase A activity SYNONYMS - MsrA SYNONYMS - peptide Met(O) reductase activity SYNONYMS - peptide methionine sulfoxide reductase activity SYNONYMS - peptide-L-methionine:thioredoxin-disulfide S-oxidoreductase [L-methionine (S)-S-oxide-forming] activity SYNONYMS - protein-methionine-S-oxide reductase activity // UNIQUE-ID - GO:0019153 TYPES - GO:0016671 COMMON-NAME - protein-disulfide reductase (glutathione) activity SYNONYMS - glutaredoxin reductase SYNONYMS - glutathione--insulin transhydrogenase activity SYNONYMS - glutathione-insulin transhydrogenase activity SYNONYMS - glutathione-protein disulfide oxidoreductase activity SYNONYMS - glutathione:protein-disulfide oxidoreductase activity SYNONYMS - GSH-insulin transhydrogenase activity SYNONYMS - insulin reductase activity SYNONYMS - protein disulfide reductase (glutathione) SYNONYMS - protein disulfide transhydrogenase activity SYNONYMS - protein-disulfide interchange enzyme SYNONYMS - protein-disulfide isomerase/oxidoreductase activity SYNONYMS - protein-disulphide reductase (glutathione) activity SYNONYMS - reductase, protein disulfide (glutathione) SYNONYMS - thiol-protein disulphide oxidoreductase activity SYNONYMS - thiol:protein-disulfide oxidoreductase activity // UNIQUE-ID - GO:0008121 TYPES - GO:0015078 TYPES - GO:0016681 COMMON-NAME - ubiquinol-cytochrome-c reductase activity SYNONYMS - coenzyme Q-cytochrome c reductase activity SYNONYMS - coenzyme QH2-cytochrome c reductase activity SYNONYMS - complex III (mitochondrial electron transport) activity SYNONYMS - CoQH2-cytochrome c oxidoreductase activity SYNONYMS - cytochrome bc1 complex SYNONYMS - dihydrocoenzyme Q-cytochrome c reductase activity SYNONYMS - mitochondrial electron transport complex III SYNONYMS - QH2:cytochrome c oxidoreductase activity SYNONYMS - reduced coenzyme Q-cytochrome c reductase activity SYNONYMS - reduced ubiquinone-cytochrome c oxidoreductase activity SYNONYMS - reduced ubiquinone-cytochrome c reductase, complex III (mitochondrial electron transport) SYNONYMS - ubihydroquinol:cytochrome c oxidoreductase activity SYNONYMS - ubiquinol-cytochrome c oxidoreductase activity SYNONYMS - ubiquinol-cytochrome c-2 oxidoreductase activity SYNONYMS - ubiquinol-cytochrome c1 oxidoreductase activity SYNONYMS - ubiquinol-cytochrome c2 reductase activity SYNONYMS - ubiquinol:ferricytochrome-c oxidoreductase activity SYNONYMS - ubiquinone--cytochrome-c oxidoreductase activity SYNONYMS - ubiquinone-cytochrome b-c1 oxidoreductase activity SYNONYMS - ubiquinone-cytochrome c oxidoreductase activity SYNONYMS - ubiquinone-cytochrome c reductase activity // UNIQUE-ID - GO:0008127 TYPES - GO:0016702 COMMON-NAME - quercetin 2,3-dioxygenase activity SYNONYMS - flavonol 2,4-oxygenase activity SYNONYMS - quercetin:oxygen 2,3-oxidoreductase (decyclizing) SYNONYMS - quercetinase activity // UNIQUE-ID - GO:0016165 TYPES - GO:0016702 COMMON-NAME - lipoxygenase activity SYNONYMS - carotene oxidase activity SYNONYMS - fat oxidase activity SYNONYMS - linoleate:oxygen 13-oxidoreductase activity SYNONYMS - lionoleate:O2 oxidoreductase activity SYNONYMS - lipoperoxidase activity SYNONYMS - lipoxidase activity SYNONYMS - lipoxydase activity // UNIQUE-ID - GO:0017172 TYPES - GO:0016702 COMMON-NAME - cysteine dioxygenase activity // UNIQUE-ID - GO:0018583 TYPES - GO:0016702 COMMON-NAME - biphenyl-2,3-diol 1,2-dioxygenase activity SYNONYMS - 2,3-dihydroxybiphenyl 1,2-dioxygenase activity SYNONYMS - 2,3-dihydroxybiphenyl dioxygenase activity SYNONYMS - biphenyl-2,3-diol dioxygenase activity SYNONYMS - biphenyl-2,3-diol:oxygen 1,2-oxidoreductase (decyclizing) // UNIQUE-ID - GO:0047677 TYPES - GO:0016702 COMMON-NAME - arachidonate 8-lipoxygenase activity SYNONYMS - 8(R)-lipoxygenase activity SYNONYMS - 8-lipoxygenase activity SYNONYMS - arachidonate:oxygen 8-oxidoreductase activity // UNIQUE-ID - GO:0050473 TYPES - GO:0016702 COMMON-NAME - arachidonate 15-lipoxygenase activity SYNONYMS - 15-lipoxygenase activity SYNONYMS - arachidonate omega(6) lipoxygenase activity SYNONYMS - arachidonate omega6 lipoxygenase activity SYNONYMS - arachidonate:oxygen 15-oxidoreductase activity SYNONYMS - linoleic acid omega6-lipoxygenase activity SYNONYMS - omega6 lipoxygenase activity // UNIQUE-ID - GO:0008336 TYPES - GO:0016706 COMMON-NAME - gamma-butyrobetaine dioxygenase activity SYNONYMS - 4-trimethylammoniobutanoate,2-oxoglutarate:oxygen oxidoreductase (3-hydroxylating) SYNONYMS - alpha-butyrobetaine hydroxylase activity SYNONYMS - butyrobetaine hydroxylase activity SYNONYMS - g-butyrobetaine dioxygenase activity SYNONYMS - gamma-BBH activity SYNONYMS - gamma-butyrobetaine hydroxylase activity SYNONYMS - gamma-butyrobetaine,2-oxoglutarate dioxygenase activity // UNIQUE-ID - GO:0008475 TYPES - GO:0016706 COMMON-NAME - procollagen-lysine 5-dioxygenase activity SYNONYMS - collagen lysine hydroxylase activity SYNONYMS - lysine hydroxylase activity SYNONYMS - lysine,2-oxoglutarate 5-dioxygenase activity SYNONYMS - lysine-2-oxoglutarate dioxygenase activity SYNONYMS - lysyl hydroxylase activity SYNONYMS - lysylprotocollagen dioxygenase activity SYNONYMS - peptidyl-lysine, 2-oxoglutarate: oxygen oxidoreductase activity SYNONYMS - peptidyllysine, 2-oxoglutarate:oxygen 5-oxidoreductase activity SYNONYMS - procollagen-L-lysine,2-oxoglutarate:oxygen oxidoreductase (5-hydroxylating) SYNONYMS - procollagen-lysine,2-oxoglutarate 5-dioxygenase activity SYNONYMS - protocollagen lysine dioxygenase activity SYNONYMS - protocollagen lysine hydroxylase activity SYNONYMS - protocollagen lysyl hydroxylase activity // UNIQUE-ID - GO:0031543 TYPES - GO:0016706 COMMON-NAME - peptidyl-proline dioxygenase activity // UNIQUE-ID - GO:0050353 TYPES - GO:0016706 COMMON-NAME - trimethyllysine dioxygenase activity SYNONYMS - 6-N,6-N,6-N-trimethyl-L-lysine,2-oxoglutarate:oxygen oxidoreductase (3-hydroxylating) SYNONYMS - epsilon-trimethyllysine 2-oxoglutarate dioxygenase activity SYNONYMS - N6,N6,N6-trimethyl-L-lysine,2-oxoglutarate:oxygen oxidoreductase (3-hydroxylating) SYNONYMS - TML dioxygenase activity SYNONYMS - TML hydroxylase activity SYNONYMS - TML-alpha-ketoglutarate dioxygenase activity SYNONYMS - TMLD activity SYNONYMS - trimethyllysine alpha-ketoglutarate dioxygenase activity SYNONYMS - trimethyllysine,2-oxoglutarate dioxygenase activity // UNIQUE-ID - GO:0016213 TYPES - GO:0016717 COMMON-NAME - linoleoyl-CoA desaturase activity COMMENT - Note that this function was formerly EC:1.14.99.25. SYNONYMS - delta(6)-acyl CoA desaturase activity SYNONYMS - delta(6)-desaturase activity SYNONYMS - delta(6)-fatty acyl-CoA desaturase activity SYNONYMS - delta6-acyl CoA desaturase activity SYNONYMS - delta6-desaturase activity SYNONYMS - delta6-fatty acyl-CoA desaturase activity SYNONYMS - fatty acid 6-desaturase activity SYNONYMS - fatty acid delta(6)-desaturase activity SYNONYMS - fatty acid delta6-desaturase activity SYNONYMS - linoleate desaturase activity SYNONYMS - linoleic acid desaturase activity SYNONYMS - linoleic desaturase activity SYNONYMS - linoleoyl CoA desaturase activity SYNONYMS - linoleoyl-CoA,hydrogen-donor:oxygen oxidoreductase activity SYNONYMS - linoleoyl-coenzyme A desaturase activity SYNONYMS - long-chain fatty acid delta(6)-desaturase activity SYNONYMS - long-chain fatty acid delta6-desaturase activity // UNIQUE-ID - GO:0004785 TYPES - GO:0004784 COMMON-NAME - copper, zinc superoxide dismutase activity SYNONYMS - Cu,Zn-SOD SYNONYMS - Cu-Zn superoxide dismutase activity activity SYNONYMS - cuprein SYNONYMS - cytocuprein SYNONYMS - erythrocuprein SYNONYMS - hemocuprein SYNONYMS - hepatocuprein SYNONYMS - SOD-1 SYNONYMS - SOD-3 SYNONYMS - SOD-4 SYNONYMS - superoxide dismutase I SYNONYMS - zinc superoxide oxidoreductase // UNIQUE-ID - GO:0008383 TYPES - GO:0004784 COMMON-NAME - manganese superoxide dismutase activity SYNONYMS - manganese superoxide oxidoreductase SYNONYMS - Mn-SOD SYNONYMS - SOD-2 // UNIQUE-ID - GO:0004854 TYPES - GO:0016726 COMMON-NAME - xanthine dehydrogenase activity // UNIQUE-ID - GO:0004855 TYPES - GO:0016727 COMMON-NAME - xanthine oxidase activity SYNONYMS - hypoxanthine oxidase activity SYNONYMS - hypoxanthine-xanthine oxidase activity SYNONYMS - hypoxanthine:oxygen oxidoreductase activity SYNONYMS - schardinger enzyme SYNONYMS - Schardinger enzyme activity SYNONYMS - xanthine oxidoreductase activity SYNONYMS - xanthine:O(2) oxidoreductase activity SYNONYMS - xanthine:O2 oxidoreductase activity SYNONYMS - xanthine:oxygen oxidoreductase activity SYNONYMS - xanthine:xanthine oxidase activity // UNIQUE-ID - GO:0004748 TYPES - GO:0016728 COMMON-NAME - ribonucleoside-diphosphate reductase activity SYNONYMS - 2'-deoxyribonucleoside-diphosphate:oxidized-thioredoxin 2'-oxidoreductase activity SYNONYMS - 2'-deoxyribonucleoside-diphosphate:thioredoxin-disulfide 2'-oxidoreductase activity SYNONYMS - nucleoside diphosphate reductase activity SYNONYMS - purine/pyrimidine nucleoside diphosphate reduction SYNONYMS - ribonucleoside 5'-diphosphate reductase activity SYNONYMS - ribonucleoside diphosphate reductase activity SYNONYMS - ribonucleotide diphosphate reductase activity SYNONYMS - ribonucleotide reductase activity SYNONYMS - RNR // UNIQUE-ID - GO:0004739 TYPES - GO:0004738 TYPES - GO:0016624 COMMON-NAME - pyruvate dehydrogenase (acetyl-transferring) activity SYNONYMS - MtPDC (mitochondrial pyruvate dehydogenase complex) activity SYNONYMS - PDH SYNONYMS - pyruvate dehydrogenase (lipoamide) activity SYNONYMS - pyruvate dehydrogenase complex activity SYNONYMS - pyruvate:dihydrolipoyllysine-residue acetyltransferase-lipoyllysine 2-oxidoreductase (decarboxylating, acceptor-acetylating) SYNONYMS - pyruvate:lipoamide 2-oxidoreductase (decarboxylating and acceptor-acetylating) activity // UNIQUE-ID - GO:0004028 TYPES - GO:0016620 COMMON-NAME - 3-chloroallyl aldehyde dehydrogenase activity // UNIQUE-ID - GO:0004029 TYPES - GO:0016620 COMMON-NAME - aldehyde dehydrogenase (NAD) activity SYNONYMS - aldehyde dehydrogenase (NAD+) SYNONYMS - aldehyde:NAD+ oxidoreductase activity SYNONYMS - CoA-independent aldehyde dehydrogenase activity SYNONYMS - m-methylbenzaldehyde dehydrogenase activity SYNONYMS - NAD-aldehyde dehydrogenase activity SYNONYMS - NAD-dependent 4-hydroxynonenal dehydrogenase activity SYNONYMS - NAD-dependent aldehyde dehydrogenase activity SYNONYMS - NAD-linked aldehyde dehydrogenase activity SYNONYMS - propionaldehyde dehydrogenase activity // UNIQUE-ID - GO:0004030 TYPES - GO:0016620 COMMON-NAME - aldehyde dehydrogenase [NAD(P)+] activity SYNONYMS - aldehyde:NAD(P)+ oxidoreductase activity SYNONYMS - ALDH // UNIQUE-ID - GO:0004350 TYPES - GO:0016620 COMMON-NAME - glutamate-5-semialdehyde dehydrogenase activity SYNONYMS - beta-glutamylphosphate reductase activity SYNONYMS - gamma-glutamyl phosphate reductase activity SYNONYMS - gamma-glutamylphosphate reductase activity SYNONYMS - glutamate semialdehyde dehydrogenase activity SYNONYMS - glutamate-gamma-semialdehyde dehydrogenase activity SYNONYMS - glutamate-phosphate reductase activity SYNONYMS - glutamyl-gamma-semialdehyde dehydrogenase activity SYNONYMS - glutamylphosphate reductase activity SYNONYMS - L-glutamate-5-semialdehyde:NADP+ 5-oxidoreductase (phosphorylating) // UNIQUE-ID - GO:0004777 TYPES - GO:0016620 COMMON-NAME - succinate-semialdehyde dehydrogenase activity SYNONYMS - succinate semialdehyde dehydrogenase activity SYNONYMS - succinate semialdehyde:NAD+ oxidoreductase activity SYNONYMS - succinate-semialdehyde:NAD+ oxidoreductase activity SYNONYMS - succinic semialdehyde dehydrogenase activity SYNONYMS - succinyl semialdehyde dehydrogenase activity // UNIQUE-ID - GO:0008943 TYPES - GO:0016620 COMMON-NAME - glyceraldehyde-3-phosphate dehydrogenase activity COMMENT - Note that the reaction with phosphate as a substrate produces 3-phospho-D-glyceroyl-phosphate. // UNIQUE-ID - GO:0004031 TYPES - GO:0016623 COMMON-NAME - aldehyde oxidase activity // UNIQUE-ID - GO:0003863 TYPES - GO:0016624 COMMON-NAME - 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity SYNONYMS - 2-oxoisocaproate dehydrogenase activity SYNONYMS - 2-oxoisovalerate (lipoate) dehydrogenase activity SYNONYMS - 3-methyl-2-oxobutanoate dehydrogenase (lipoamide) activity SYNONYMS - 3-methyl-2-oxobutanoate:dihydrolipoyllysine-residue (2-methylpropanoyl)transferase-lipoyllysine 2-oxidoreductase (decarboxylating, acceptor-2-methylpropanoylating) SYNONYMS - 3-methyl-2-oxobutanoate:lipoamide oxidoreductase (decarboxylating and acceptor-2-methylpropanoylating) activity SYNONYMS - alpha-keto-alpha-methylvalerate dehydrogenase activity SYNONYMS - alpha-ketoisocaproate dehydrogenase activity SYNONYMS - alpha-ketoisocaproic dehydrogenase activity SYNONYMS - alpha-ketoisocaproic-alpha-keto-alpha-methylvaleric dehydrogenase activity SYNONYMS - alpha-ketoisovalerate dehydrogenase activity SYNONYMS - alpha-oxoisocaproate dehydrogenase activity SYNONYMS - BCKDH activity SYNONYMS - BCOAD activity SYNONYMS - branched chain keto acid dehydrogenase activity SYNONYMS - branched-chain (-2-oxoacid) dehydrogenase (BCD) activity SYNONYMS - branched-chain 2-keto acid dehydrogenase activity SYNONYMS - branched-chain 2-oxo acid dehydrogenase activity SYNONYMS - branched-chain alpha-keto acid dehydrogenase activity SYNONYMS - branched-chain alpha-oxo acid dehydrogenase activity SYNONYMS - branched-chain keto acid dehydrogenase activity SYNONYMS - branched-chain ketoacid dehydrogenase activity SYNONYMS - dehydrogenase, 2-oxoisovalerate (lipoate) activity SYNONYMS - dehydrogenase, branched chain alpha-keto acid activity // UNIQUE-ID - GO:0004372 TYPES - GO:0008168 COMMON-NAME - glycine hydroxymethyltransferase activity SYNONYMS - 5,10-methylenetetrahydrofolate:glycine hydroxymethyltransferase activity SYNONYMS - allothreonine aldolase activity SYNONYMS - L-serine hydroxymethyltransferase activity SYNONYMS - serine aldolase activity SYNONYMS - serine hydroxymethylase activity SYNONYMS - serine hydroxymethyltransferase activity SYNONYMS - serine transhydroxymethylase activity // UNIQUE-ID - GO:0008169 TYPES - GO:0008168 COMMON-NAME - C-methyltransferase activity // UNIQUE-ID - GO:0008170 TYPES - GO:0008168 COMMON-NAME - N-methyltransferase activity // UNIQUE-ID - GO:0008171 TYPES - GO:0008168 COMMON-NAME - O-methyltransferase activity // UNIQUE-ID - GO:0008172 TYPES - GO:0008168 COMMON-NAME - S-methyltransferase activity // UNIQUE-ID - GO:0008173 TYPES - GO:0008168 COMMON-NAME - RNA methyltransferase activity COMMENT - Note that the methyl donor is usually S-adenosyl-L-methionine, but there is at least one exception (see GO:0030698). // UNIQUE-ID - GO:0008276 TYPES - GO:0008168 COMMON-NAME - protein methyltransferase activity // UNIQUE-ID - GO:0008757 TYPES - GO:0008168 COMMON-NAME - S-adenosylmethionine-dependent methyltransferase activity SYNONYMS - S-adenosyl methionine-dependent methyltransferase activity // UNIQUE-ID - GO:0009008 TYPES - GO:0008168 COMMON-NAME - DNA-methyltransferase activity SYNONYMS - deoxyribonucleate methylase activity SYNONYMS - deoxyribonucleate methyltransferase activity SYNONYMS - deoxyribonucleic acid methylase activity SYNONYMS - deoxyribonucleic acid methyltransferase activity SYNONYMS - deoxyribonucleic acid modification methylase activity SYNONYMS - DNA methylase SYNONYMS - DNA methyltransferase activity SYNONYMS - DNA transmethylase activity SYNONYMS - Type II DNA methylase // UNIQUE-ID - GO:0042084 TYPES - GO:0008168 COMMON-NAME - 5-methyltetrahydrofolate-dependent methyltransferase activity // UNIQUE-ID - GO:0015068 TYPES - GO:0015067 COMMON-NAME - glycine amidinotransferase activity SYNONYMS - arginine-glycine amidinotransferase activity SYNONYMS - arginine-glycine transamidinase activity SYNONYMS - glycine transamidinase activity SYNONYMS - L-arginine:glycine amidinotransferase activity // UNIQUE-ID - GO:0008415 TYPES - GO:0016747 COMMON-NAME - acyltransferase activity // UNIQUE-ID - GO:0047963 TYPES - GO:0016747 COMMON-NAME - glycine N-choloyltransferase activity SYNONYMS - amino acid N-choloyltransferase activity SYNONYMS - BACAT activity SYNONYMS - BAT activity SYNONYMS - bile acid-CoA:amino acid N-acyltransferase activity SYNONYMS - choloyl-CoA:glycine N-choloyltransferase activity SYNONYMS - cholyl-CoA glycine-taurine N-acyltransferase activity SYNONYMS - cholyl-CoA:taurine N-acyltransferase activity SYNONYMS - glycine--taurine N-acyltransferase activity // UNIQUE-ID - GO:0016297 TYPES - GO:0004312 TYPES - GO:0016790 COMMON-NAME - acyl-[acyl-carrier-protein] hydrolase activity SYNONYMS - acyl-[acyl-carrier protein] hydrolase activity SYNONYMS - acyl-ACP hydrolase activity SYNONYMS - acyl-ACP thioesterase activity SYNONYMS - acyl-ACP-hydrolase activity SYNONYMS - acyl-acyl carrier protein hydrolase activity SYNONYMS - acyl-acyl-carrier-protein hydrolase activity SYNONYMS - S-acyl fatty acid synthase thioesterase activity // UNIQUE-ID - GO:0016603 TYPES - GO:0016755 COMMON-NAME - glutaminyl-peptide cyclotransferase activity SYNONYMS - glutaminyl cyclase activity SYNONYMS - glutaminyl-transfer ribonucleate cyclotransferase activity SYNONYMS - glutaminyl-tRNA cyclotransferase activity SYNONYMS - L-glutaminyl-peptide gamma-glutamyltransferase (cyclizing) // UNIQUE-ID - GO:0003878 TYPES - GO:0046912 COMMON-NAME - ATP citrate synthase activity COMMENT - Note that this function was formerly EC:4.1.3.8. SYNONYMS - acetyl-CoA:oxaloacetate acetyltransferase (isomerizing; ADP- phosphorylating) activity SYNONYMS - acetyl-CoA:oxaloacetate acetyltransferase (isomerizing; ADP-phosphorylating) SYNONYMS - acetyl-CoA:oxaloacetate C-acetyltransferase [(pro-S)-carboxymethyl-forming, ADP-phosphorylating] SYNONYMS - adenosine triphosphate citrate lyase activity SYNONYMS - ATP citrate (pro-S)-lyase activity SYNONYMS - ATP-citrate (pro-S)-lyase activity SYNONYMS - ATP-citrate (pro-S-)-lyase activity SYNONYMS - ATP-citric lyase activity SYNONYMS - ATP:citrate oxaloacetate-lyase ((pro-S)-CH(2)COO(-)->acetyl-CoA) (ATP- dephosphorylating) activity SYNONYMS - ATP:citrate oxaloacetate-lyase [(pro-S)-CH2COO-rightacetyl-CoA] (ATP-dephosphorylating) SYNONYMS - citrate cleavage enzyme activity SYNONYMS - citrate-ATP lyase activity SYNONYMS - citric cleavage enzyme activity // UNIQUE-ID - GO:0008375 TYPES - GO:0008194 TYPES - GO:0016758 COMMON-NAME - acetylglucosaminyltransferase activity SYNONYMS - GlcNAc transferase activity // UNIQUE-ID - GO:0008376 TYPES - GO:0008194 TYPES - GO:0016758 COMMON-NAME - acetylgalactosaminyltransferase activity SYNONYMS - GalNAc transferase activity // UNIQUE-ID - GO:0015020 TYPES - GO:0008194 TYPES - GO:0016758 COMMON-NAME - glucuronosyltransferase activity SYNONYMS - 1-naphthol glucuronyltransferase activity SYNONYMS - 1-naphthol-UDP-glucuronosyltransferase activity SYNONYMS - 17-beta-hydroxysteroid UDP-glucuronosyltransferase activity SYNONYMS - 17-OH steroid UDPGT activity SYNONYMS - 17beta-hydroxysteroid UDP-glucuronosyltransferase activity SYNONYMS - 3-alpha-hydroxysteroid UDP-glucuronosyltransferase activity SYNONYMS - 3-OH androgenic UDPGT activity SYNONYMS - 3alpha-hydroxysteroid UDP-glucuronosyltransferase activity SYNONYMS - 4-hydroxybiphenyl UDP-glucuronosyltransferase activity SYNONYMS - 4-methylumbelliferone UDP-glucuronosyltransferase activity SYNONYMS - 4-nitrophenol UDP-glucuronyltransferase activity SYNONYMS - 4-nitrophenol UDPGT activity SYNONYMS - bilirubin glucuronyltransferase activity SYNONYMS - bilirubin monoglucuronide glucuronyltransferase activity SYNONYMS - bilirubin UDP-glucuronosyltransferase activity SYNONYMS - bilirubin UDPGT activity SYNONYMS - bilirubin uridine diphosphoglucuronyltransferase activity SYNONYMS - ciramadol UDP-glucuronyltransferase activity SYNONYMS - estriol UDPglucuronosyltransferase activity SYNONYMS - estrone UDPglucuronosyltransferase activity SYNONYMS - GT activity SYNONYMS - morphine glucuronyltransferase activity SYNONYMS - p-hydroxybiphenyl UDP glucuronyltransferase activity SYNONYMS - p-nitrophenol UDP-glucuronosyltransferase activity SYNONYMS - p-nitrophenol UDP-glucuronyltransferase activity SYNONYMS - p-nitrophenylglucuronosyltransferase activity SYNONYMS - p-phenylphenol glucuronyltransferase activity SYNONYMS - phenyl-UDP-glucuronosyltransferase activity SYNONYMS - Phenyl-UDP-glucuronosyltransferase activity SYNONYMS - PNP-UDPGT SYNONYMS - pnp-UDPGT activity SYNONYMS - UDP glucuronate-estradiol-glucuronosyltransferase activity SYNONYMS - UDP glucuronate-estriol glucuronosyltransferase activity SYNONYMS - UDP glucuronic acid transferase activity SYNONYMS - UDP glucuronosyltransferase activity SYNONYMS - UDP glucuronyltransferase activity SYNONYMS - UDP-glucuronate beta-D-glucuronosyltransferase (acceptor-unspecific) SYNONYMS - UDP-glucuronate-4-hydroxybiphenyl glucuronosyltransferase activity SYNONYMS - UDP-glucuronate-bilirubin glucuronyltransferase activity SYNONYMS - UDP-glucuronosyltransferase activity SYNONYMS - UDP-glucuronyltransferase activity SYNONYMS - UDPGA transferase activity SYNONYMS - UDPGA-glucuronyltransferase activity SYNONYMS - UDPglucuronate beta-D-glucuronosyltransferase (acceptor-unspecific) activity SYNONYMS - UDPGT activity SYNONYMS - uridine 5'-diphosphoglucuronyltransferase activity SYNONYMS - uridine diphosphate glucuronyltransferase activity SYNONYMS - uridine diphosphoglucuronate-1,2-diacylglycerol glucuronosyltransferase activity SYNONYMS - uridine diphosphoglucuronate-4-hydroxybiphenyl glucuronosyltransferase activity SYNONYMS - uridine diphosphoglucuronate-bilirubin glucuronoside glucuronosyltransferase activity SYNONYMS - uridine diphosphoglucuronate-bilirubin glucuronosyltransferase activity SYNONYMS - uridine diphosphoglucuronate-estradiol glucuronosyltransferase activity SYNONYMS - uridine diphosphoglucuronate-estriol 16-alpha-glucuronosyltransferase activity SYNONYMS - uridine diphosphoglucuronate-estriol 16alpha-glucuronosyltransferase activity SYNONYMS - uridine diphosphoglucuronate-estriol glucuronosyltransferase activity SYNONYMS - uridine diphosphoglucuronosyltransferase activity SYNONYMS - uridine diphosphoglucuronyltransferase activity // UNIQUE-ID - GO:0035250 TYPES - GO:0008194 TYPES - GO:0008378 COMMON-NAME - UDP-galactosyltransferase activity // UNIQUE-ID - GO:0035251 TYPES - GO:0008194 TYPES - GO:0046527 COMMON-NAME - UDP-glucosyltransferase activity // UNIQUE-ID - GO:0035252 TYPES - GO:0008194 TYPES - GO:0042285 COMMON-NAME - UDP-xylosyltransferase activity // UNIQUE-ID - GO:0050501 TYPES - GO:0008194 TYPES - GO:0016758 COMMON-NAME - hyaluronan synthase activity SYNONYMS - alternating UDP-alpha-N-acetyl-D-glucosamine:beta-D-glucuronosyl-(1->3)-[nascent hyaluronan] 4-N-acetyl-beta-D-glucosaminyltransferase and UDP-alpha-D-glucuronate:N-acetyl-beta-D-glucosaminyl-(1->4)-[nascent hyaluronan] 3-beta-D-glucuronosyltransferase activity SYNONYMS - HAS activity SYNONYMS - seHAS SYNONYMS - spHAS // UNIQUE-ID - GO:0047290 TYPES - GO:0008373 COMMON-NAME - (alpha-N-acetylneuraminyl-2,3-beta-galactosyl-1,3)-N-acetyl-galactosaminide 6-alpha-sialyltransferase activity SYNONYMS - (alpha-N-acetylneuraminyl-2,3-alpha-galactosyl-1,3)-N-acetyl-galactosaminide alpha-2,6-sialyltransferase activity SYNONYMS - (alpha-N-acetylneuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase activity SYNONYMS - alpha-N-acetylneuraminyl-2,3-beta-galactosyl-1,3-N-acetyl-galactosaminide alpha-2,6-sialyltransferase activity SYNONYMS - CMP-N-acetylneuraminate:(alpha-N-acetylneuraminyl-2,3-beta-D-galactosyl-1,3)-N-acetyl-D-galactosaminide alpha-2,6-N-acetylneuraminyl-transferase activity SYNONYMS - cytidine monophosphoacetylneuraminate-(alpha-N-acetylneuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide-alpha-2,6-sialyltransferase activity SYNONYMS - NeuAc-alpha-2,3-Gal-beta-1,3-GalNAc-alpha-2,6-sialyltransferase activity SYNONYMS - neuac-alpha-2,3-Gal-beta-1,3-GalNAc-alpha-2,6-sialyltransferase activity SYNONYMS - sialyltransferase 3C activity SYNONYMS - sialyltransferase 7D activity SYNONYMS - SIAT7 SYNONYMS - ST6GALNAC activity // UNIQUE-ID - GO:0000030 TYPES - GO:0016758 COMMON-NAME - mannosyltransferase activity // UNIQUE-ID - GO:0003844 TYPES - GO:0016758 COMMON-NAME - 1,4-alpha-glucan branching enzyme activity SYNONYMS - 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-alpha-D-(1,4-alpha-D-glucano)-transferase activity SYNONYMS - 1,4-glucan-6-(1,4-glucano)-transferase activity SYNONYMS - alpha-1,4-glucan:alpha-1,4-glucan-6-glycosyltransferase activity SYNONYMS - alpha-glucan-branching glycosyltransferase activity SYNONYMS - amylo-(1,4 to 1,6)transglucosidase activity SYNONYMS - amylo-(1,4->1,6)-transglycosylase activity SYNONYMS - amylose isomerase activity SYNONYMS - branching enzyme activity SYNONYMS - branching glycosyltransferase activity SYNONYMS - enzymatic branching factor SYNONYMS - enzyme Q SYNONYMS - glucosan transglycosylase activity SYNONYMS - glycogen branching enzyme activity SYNONYMS - plant branching enzyme SYNONYMS - Q-enzyme SYNONYMS - starch branching enzyme // UNIQUE-ID - GO:0004576 TYPES - GO:0016758 COMMON-NAME - oligosaccharyl transferase activity // UNIQUE-ID - GO:0004645 TYPES - GO:0016758 COMMON-NAME - phosphorylase activity SYNONYMS - 1,4-alpha-D-glucan:phosphate alpha-D-glucosyltransferase activity SYNONYMS - 1,4-alpha-glucan phosphorylase activity SYNONYMS - alpha-glucan phosphorylase SYNONYMS - amylopectin phosphorylase SYNONYMS - amylophosphorylase activity SYNONYMS - glucan phosphorylase SYNONYMS - glucosan phosphorylase SYNONYMS - granulose phosphorylase SYNONYMS - muscle phosphorylase SYNONYMS - muscle phosphorylase a and b activity SYNONYMS - myophosphorylase SYNONYMS - polyphosphorylase activity SYNONYMS - potato phosphorylase SYNONYMS - starch phosphorylase // UNIQUE-ID - GO:0008378 TYPES - GO:0016758 COMMON-NAME - galactosyltransferase activity // UNIQUE-ID - GO:0008417 TYPES - GO:0016758 COMMON-NAME - fucosyltransferase activity // UNIQUE-ID - GO:0046527 TYPES - GO:0016758 COMMON-NAME - glucosyltransferase activity // UNIQUE-ID - GO:0003950 TYPES - GO:0016763 COMMON-NAME - NAD+ ADP-ribosyltransferase activity SYNONYMS - ADP-ribosyltransferase (polymerizing) activity SYNONYMS - NAD ADP-ribosyltransferase activity SYNONYMS - NAD+:poly(adenine-diphosphate-D-ribosyl)-acceptor ADP-D-ribosyl-transferase activity SYNONYMS - poly(adenosine diphosphate ribose) polymerase activity SYNONYMS - poly(ADP-ribose) synthase activity SYNONYMS - poly(ADP-ribose) synthetase activity SYNONYMS - poly(ADP-ribose)polymerase activity // UNIQUE-ID - GO:0003956 TYPES - GO:0016763 COMMON-NAME - NAD(P)+-protein-arginine ADP-ribosyltransferase activity SYNONYMS - ADP-ribosyltransferase activity SYNONYMS - mono(ADP-ribosyl)transferase activity SYNONYMS - mono(ADPribosyl)transferase activity SYNONYMS - NAD(+):L-arginine ADP-D-ribosyltransferase activity SYNONYMS - NAD(P)(+)--arginine ADP-ribosyltransferase activity SYNONYMS - NAD(P)+-arginine ADP-ribosyltransferase activity SYNONYMS - NAD(P)+:L-arginine ADP-D-ribosyltransferase activity SYNONYMS - NAD(P)+:protein-L-arginine ADP-D-ribosyltransferase activity SYNONYMS - NAD(P)-arginine ADP-ribosyltransferase activity SYNONYMS - NAD+:L-arginine ADP-D-ribosyltransferase activity SYNONYMS - peptidyl-arginine ADP-ribosylation activity SYNONYMS - protein-arginine ADP-ribosyltransferase activity // UNIQUE-ID - GO:0003999 TYPES - GO:0016763 COMMON-NAME - adenine phosphoribosyltransferase activity SYNONYMS - adenine phosphoribosylpyrophosphate transferase activity SYNONYMS - adenosine phosphoribosyltransferase activity SYNONYMS - adenylate pyrophosphorylase activity SYNONYMS - adenylic pyrophosphorylase activity SYNONYMS - AMP diphosphorylase activity SYNONYMS - AMP pyrophosphorylase activity SYNONYMS - AMP-pyrophosphate phosphoribosyltransferase activity SYNONYMS - AMP:diphosphate phospho-D-ribosyltransferase activity SYNONYMS - APRT activity SYNONYMS - transphosphoribosidase activity // UNIQUE-ID - GO:0004422 TYPES - GO:0016763 COMMON-NAME - hypoxanthine phosphoribosyltransferase activity COMMENT - Note that GO uses one molecular function term for consistency with Enzyme Nomenclature; also, all hypoxanthine phosphoribosyltransferases identified to date can act on either hypoxanthine or guanine, as well as xanthine or 6-mercaptopurine. SYNONYMS - 6-hydroxypurine phosphoribosyltransferase activity SYNONYMS - 6-mercaptopurine phosphoribosyltransferase activity SYNONYMS - GMP pyrophosphorylase activity SYNONYMS - GPRT SYNONYMS - guanine phosphoribosyltransferase activity SYNONYMS - guanine-hypoxanthine phosphoribosyltransferase activity SYNONYMS - guanosine 5'-phosphate pyrophosphorylase activity SYNONYMS - guanosine phosphoribosyltransferase activity SYNONYMS - guanylate pyrophosphorylase activity SYNONYMS - guanylic pyrophosphorylase activity SYNONYMS - HGPRTase activity SYNONYMS - HPRT SYNONYMS - hypoxanthine-guanine phosphoribosyltransferase activity SYNONYMS - IMP diphosphorylase activity SYNONYMS - IMP pyrophosphorylase activity SYNONYMS - IMP-GMP pyrophosphorylase activity SYNONYMS - IMP:diphosphate phospho-D-ribosyltransferase activity SYNONYMS - inosinate pyrophosphorylase activity SYNONYMS - inosine 5'-phosphate pyrophosphorylase activity SYNONYMS - inosinic acid pyrophosphorylase activity SYNONYMS - inosinic pyrophosphorylase activity SYNONYMS - purine-6-thiol phosphoribosyltransferase activity SYNONYMS - Transphosphoribosidase activity // UNIQUE-ID - GO:0004588 TYPES - GO:0016763 COMMON-NAME - orotate phosphoribosyltransferase activity SYNONYMS - OPRT activity SYNONYMS - OPRTase activity SYNONYMS - orotate phosphoribosyl pyrophosphate transferase activity SYNONYMS - orotic acid phosphoribosyltransferase activity SYNONYMS - orotidine 5'-monophosphate pyrophosphorylase activity SYNONYMS - orotidine monophosphate pyrophosphorylase activity SYNONYMS - orotidine phosphoribosyltransferase activity SYNONYMS - orotidine-5'-phosphate diphosphorylase activity SYNONYMS - orotidine-5'-phosphate pyrophosphorylase activity SYNONYMS - orotidine-5'-phosphate:diphosphate phospho-alpha-D-ribosyl-transferase activity SYNONYMS - orotidylate phosphoribosyltransferase activity SYNONYMS - orotidylate pyrophosphorylase activity SYNONYMS - orotidylic acid phosphorylase activity SYNONYMS - orotidylic acid pyrophosphorylase activity SYNONYMS - orotidylic phosphorylase activity SYNONYMS - orotidylic pyrophosphorylase activity // UNIQUE-ID - GO:0004850 TYPES - GO:0016763 COMMON-NAME - uridine phosphorylase activity SYNONYMS - pyrimidine phosphorylase activity SYNONYMS - UPase activity SYNONYMS - UPH SYNONYMS - UrdPase activity SYNONYMS - uridine:phosphate alpha-D-ribosyltransferase activity // UNIQUE-ID - GO:0008479 TYPES - GO:0016763 COMMON-NAME - queuine tRNA-ribosyltransferase activity SYNONYMS - [tRNA]-guanine:queuine tRNA-D-ribosyltransferase activity SYNONYMS - guanine insertion enzyme activity SYNONYMS - guanine, queuine-tRNA transglycosylase activity SYNONYMS - Q-insertase activity SYNONYMS - queuine transfer ribonucleate ribosyltransferase activity SYNONYMS - transfer ribonucleate glycosyltransferase activity SYNONYMS - tRNA guanine transglycosidase activity SYNONYMS - tRNA transglycosylase activity SYNONYMS - tRNA-guanine transglycosylase activity // UNIQUE-ID - GO:0009032 TYPES - GO:0016763 COMMON-NAME - thymidine phosphorylase activity SYNONYMS - animal growth regulators, blood platelet-derived endothelial cell growth factors SYNONYMS - blood platelet-derived endothelial cell growth factor SYNONYMS - deoxythymidine phosphorylase activity SYNONYMS - gliostatins SYNONYMS - pyrimidine deoxynucleoside phosphorylase activity SYNONYMS - pyrimidine phosphorylase activity SYNONYMS - thymidine-orthophosphate deoxyribosyltransferase activity SYNONYMS - thymidine:phosphate deoxy-alpha-D-ribosyltransferase activity SYNONYMS - thymidine:phosphate deoxy-D-ribosyltransferase activity // UNIQUE-ID - GO:0017061 TYPES - GO:0016763 COMMON-NAME - S-methyl-5-thioadenosine phosphorylase activity SYNONYMS - 5'-deoxy-5'-methylthioadenosine phosphorylase activity SYNONYMS - 5'-methylthioadenosine phosphorylase activity SYNONYMS - 5'-methylthioadenosine:phosphate methylthio-D-ribosyl-transferase activity SYNONYMS - MeSAdo phosphorylase activity SYNONYMS - MeSAdo/Ado phosphorylase activity SYNONYMS - methylthioadenosine nucleoside phosphorylase activity SYNONYMS - methylthioadenosine phosphorylase activity SYNONYMS - MTA phosphorylase activity SYNONYMS - MTAPase activity SYNONYMS - S-methyl-5-thioadenosine:phosphate S-methyl-5-thio-alpha-D-ribosyl-transferase activity // UNIQUE-ID - GO:0042285 TYPES - GO:0016763 COMMON-NAME - xylosyltransferase activity // UNIQUE-ID - GO:0047280 TYPES - GO:0016763 COMMON-NAME - nicotinamide phosphoribosyltransferase activity SYNONYMS - nicotinamide mononucleotide pyrophosphorylase activity SYNONYMS - nicotinamide mononucleotide synthetase activity SYNONYMS - nicotinamide-nucleotide:diphosphate phospho-alpha-D-ribosyltransferase activity SYNONYMS - NMN diphosphorylase activity SYNONYMS - NMN pyrophosphorylase activity SYNONYMS - NMN synthetase activity // UNIQUE-ID - GO:0004161 TYPES - GO:0004659 COMMON-NAME - dimethylallyltranstransferase activity COMMENT - Note that this is the first step in the formation of farnesyl diphosphate. The second step is 'geranyltranstransferase activity ; GO:0004337'. Consider also annotating to the biological process term 'farnesyl diphosphate biosynthetic process ; GO:0045337'. SYNONYMS - (2E,6E)-farnesyl diphosphate synthetase activity SYNONYMS - dimethylallyl-diphosphate:isopentenyl-diphosphate dimethylallyltranstransferase activity SYNONYMS - dimethylallyltransferase activity SYNONYMS - diprenyltransferase activity SYNONYMS - DMAPP:IPP-dimethylallyltransferase activity SYNONYMS - geranyl pyrophosphate synthase activity SYNONYMS - geranyl pyrophosphate synthetase activity SYNONYMS - geranyl-diphosphate synthase activity SYNONYMS - trans-farnesyl pyrophosphate synthetase activity // UNIQUE-ID - GO:0004311 TYPES - GO:0004659 COMMON-NAME - farnesyltranstransferase activity SYNONYMS - farnesyltransferase SYNONYMS - geranylgeranyl pyrophosphate synthetase SYNONYMS - geranylgeranyl-diphosphate synthase // UNIQUE-ID - GO:0004337 TYPES - GO:0004659 COMMON-NAME - geranyltranstransferase activity COMMENT - Note that this is the second step in the formation of farnesyl diphosphate. The first step is 'dimethylallyltransferase activity ; GO:0004161'. Consider also annotating to the biological process term 'farnesyl diphosphate biosynthetic process ; GO:0045337'. SYNONYMS - farnesyl diphosphate synthetase activity SYNONYMS - farnesyl pyrophosphate synthetase activity SYNONYMS - farnesyl-diphosphate synthase activity SYNONYMS - farnesylpyrophosphate synthetase activity SYNONYMS - FPP synthetase activity SYNONYMS - geranyl transferase I SYNONYMS - geranyl-diphosphate:isopentenyl-diphosphate geranyltranstransferase activity SYNONYMS - geranyltransferase activity // UNIQUE-ID - GO:0008318 TYPES - GO:0004659 COMMON-NAME - protein prenyltransferase activity // UNIQUE-ID - GO:0004069 TYPES - GO:0008483 COMMON-NAME - L-aspartate:2-oxoglutarate aminotransferase activity SYNONYMS - 2-oxoglutarate-glutamate aminotransferase activity SYNONYMS - AAT SYNONYMS - aspartate alpha-ketoglutarate transaminase activity SYNONYMS - aspartate aminotransferase activity SYNONYMS - aspartate-2-oxoglutarate transaminase activity SYNONYMS - aspartate:2-oxoglutarate aminotransferase activity SYNONYMS - aspartic acid aminotransferase activity SYNONYMS - aspartic aminotransferase activity SYNONYMS - aspartyl aminotransferase activity SYNONYMS - AspT SYNONYMS - glutamate oxaloacetate transaminase activity SYNONYMS - glutamate-oxalacetate aminotransferase activity SYNONYMS - glutamate-oxalate transaminase activity SYNONYMS - glutamic oxalic transaminase activity SYNONYMS - glutamic--aspartic transaminase activity SYNONYMS - glutamic--oxaloacetic transaminase activity SYNONYMS - glutamic-aspartic aminotransferase activity SYNONYMS - glutamic-oxalacetic transaminase activity SYNONYMS - GOT (enzyme) SYNONYMS - L-aspartate transaminase activity SYNONYMS - L-aspartate-2-ketoglutarate aminotransferase activity SYNONYMS - L-aspartate-2-oxoglutarate aminotransferase activity SYNONYMS - L-aspartate-2-oxoglutarate-transaminase activity SYNONYMS - L-aspartate-alpha-ketoglutarate transaminase activity SYNONYMS - L-aspartate:2-oxoglutarate aminotransferase activity SYNONYMS - L-aspartic aminotransferase activity SYNONYMS - oxaloacetate transferase activity SYNONYMS - oxaloacetate-aspartate aminotransferase activity SYNONYMS - transaminase A activity // UNIQUE-ID - GO:0004084 TYPES - GO:0008483 COMMON-NAME - branched-chain-amino-acid transaminase activity SYNONYMS - branched-chain amino acid aminotransferase activity SYNONYMS - branched-chain amino acid-glutamate transaminase activity SYNONYMS - branched-chain aminotransferase activity SYNONYMS - branched-chain-amino-acid:2-oxoglutarate aminotransferase activity SYNONYMS - glutamate-branched-chain amino acid transaminase activity SYNONYMS - L-branched chain amino acid aminotransferase activity SYNONYMS - transaminase B activity // UNIQUE-ID - GO:0008453 TYPES - GO:0008483 COMMON-NAME - alanine-glyoxylate transaminase activity SYNONYMS - AGT activity SYNONYMS - alanine--glyoxylate aminotransferase activity SYNONYMS - alanine-glyoxylate aminotransferase activity SYNONYMS - alanine-glyoxylic aminotransferase activity SYNONYMS - L-alanine-glycine transaminase activity SYNONYMS - L-alanine:glyoxylate aminotransferase activity // UNIQUE-ID - GO:0016212 TYPES - GO:0008483 COMMON-NAME - kynurenine-oxoglutarate transaminase activity SYNONYMS - kynurenine 2-oxoglutarate transaminase activity SYNONYMS - kynurenine aminotransferase activity SYNONYMS - kynurenine transaminase (cyclizing) SYNONYMS - kynurenine--oxoglutarate aminotransferase activity SYNONYMS - kynurenine-oxoglutarate aminotransferase activity SYNONYMS - L-kynurenine aminotransferase activity SYNONYMS - L-kynurenine:2-oxoglutarate aminotransferase activity // UNIQUE-ID - GO:0047298 TYPES - GO:0008483 COMMON-NAME - (S)-3-amino-2-methylpropionate transaminase activity SYNONYMS - (S)-3-amino-2-methylpropanoate:2-oxoglutarate aminotransferase activity SYNONYMS - (S)-3-amino-2-methylpropionate aminotransferase activity SYNONYMS - beta-aminobutyric transaminase activity SYNONYMS - beta-aminoisobutyrate-alpha-ketoglutarate transaminase activity SYNONYMS - L-3-aminoisobutyrate aminotransferase activity SYNONYMS - L-3-aminoisobutyrate transaminase activity SYNONYMS - L-3-aminoisobutyric aminotransferase activity SYNONYMS - L-AIBAT activity // UNIQUE-ID - GO:0047316 TYPES - GO:0008483 COMMON-NAME - glutamine-phenylpyruvate transaminase activity SYNONYMS - glutamine transaminase K activity SYNONYMS - glutamine--phenylpyruvate aminotransferase activity SYNONYMS - glutamine-phenylpyruvate aminotransferase activity SYNONYMS - L-glutamine:phenylpyruvate aminotransferase activity // UNIQUE-ID - GO:0047536 TYPES - GO:0008483 COMMON-NAME - 2-aminoadipate transaminase activity SYNONYMS - 2-aminoadipate aminotransferase activity SYNONYMS - 2-aminoadipic aminotransferase activity SYNONYMS - alpha-aminoadipate aminotransferase activity SYNONYMS - glutamate-alpha-ketoadipate transaminase activity SYNONYMS - glutamic-ketoadipic transaminase activity SYNONYMS - L-2-aminoadipate:2-oxoglutarate aminotransferase activity // UNIQUE-ID - GO:0070547 TYPES - GO:0008483 COMMON-NAME - L-tyrosine aminotransferase activity // UNIQUE-ID - GO:0001727 TYPES - GO:0016301 COMMON-NAME - lipid kinase activity // UNIQUE-ID - GO:0004020 TYPES - GO:0016301 TYPES - GO:0016773 COMMON-NAME - adenylylsulfate kinase activity SYNONYMS - 5'-phosphoadenosine sulfate kinase activity SYNONYMS - adenosine 5'-phosphosulfate kinase activity SYNONYMS - adenosine phosphosulfate kinase activity SYNONYMS - adenosine phosphosulfokinase activity SYNONYMS - adenosine-5'-phosphosulfate 3'-phosphotransferase activity SYNONYMS - adenosine-5'-phosphosulfate-3'-phosphokinase activity SYNONYMS - adenosine-5'-phosphosulphate 3'-phosphotransferase activity SYNONYMS - adenylyl-sulfate kinase activity SYNONYMS - adenylyl-sulphate kinase activity SYNONYMS - adenylylsulfate kinase (phosphorylating) SYNONYMS - APS kinase activity SYNONYMS - ATP:adenylyl-sulfate 3'-phosphotransferase activity // UNIQUE-ID - GO:0004140 TYPES - GO:0016301 TYPES - GO:0016773 COMMON-NAME - dephospho-CoA kinase activity SYNONYMS - 3'-dephospho-CoA kinase activity SYNONYMS - ATP:dephospho-CoA 3'-phosphotransferase activity SYNONYMS - dephosphocoenzyme A kinase (phosphorylating) SYNONYMS - dephosphocoenzyme A kinase activity // UNIQUE-ID - GO:0004143 TYPES - GO:0016301 TYPES - GO:0016773 COMMON-NAME - diacylglycerol kinase activity SYNONYMS - 1,2-diacylglycerol kinase (phosphorylating) SYNONYMS - 1,2-diacylglycerol kinase activity SYNONYMS - arachidonoyl-specific diacylglycerol kinase activity SYNONYMS - ATP:1,2-diacylglycerol 3-phosphotransferase activity SYNONYMS - ATP:diacylglycerol phosphotransferase activity SYNONYMS - DG kinase activity SYNONYMS - DGK activity SYNONYMS - diacylglycerol:ATP kinase activity SYNONYMS - diglyceride kinase activity SYNONYMS - sn-1,2-diacylglycerol kinase activity // UNIQUE-ID - GO:0004305 TYPES - GO:0016301 TYPES - GO:0016773 COMMON-NAME - ethanolamine kinase activity SYNONYMS - ATP:ethanolamine O-phosphotransferase activity SYNONYMS - ethanolamine kinase (phosphorylating) SYNONYMS - ethanolamine phosphokinase activity // UNIQUE-ID - GO:0004370 TYPES - GO:0016301 TYPES - GO:0016773 COMMON-NAME - glycerol kinase activity SYNONYMS - ATP:glycerol 3-phosphotransferase activity SYNONYMS - ATP:glycerol-3-phosphotransferase activity SYNONYMS - GK SYNONYMS - glyceric kinase activity SYNONYMS - glycerokinase activity SYNONYMS - glycerol kinase (phosphorylating) // UNIQUE-ID - GO:0004371 TYPES - GO:0016301 TYPES - GO:0016773 COMMON-NAME - glycerone kinase activity SYNONYMS - acetol kinase (phosphorylating) SYNONYMS - acetol kinase activity SYNONYMS - ATP:glycerone phosphotransferase activity SYNONYMS - dihydroxyacetone kinase activity // UNIQUE-ID - GO:0004428 TYPES - GO:0016301 COMMON-NAME - inositol or phosphatidylinositol kinase activity SYNONYMS - inositol/phosphatidylinositol kinase activity // UNIQUE-ID - GO:0004496 TYPES - GO:0016301 TYPES - GO:0016773 COMMON-NAME - mevalonate kinase activity SYNONYMS - ATP:(R)-mevalonate 5-phosphotransferase activity SYNONYMS - ATP:mevalonate 5-phosphotransferase activity SYNONYMS - mevalonate 5-phosphotransferase activity SYNONYMS - mevalonate kinase (phosphorylating) SYNONYMS - mevalonate phosphokinase activity SYNONYMS - mevalonic acid kinase activity SYNONYMS - mevalonic kinase activity SYNONYMS - MVA kinase activity // UNIQUE-ID - GO:0004594 TYPES - GO:0016301 TYPES - GO:0016773 COMMON-NAME - pantothenate kinase activity SYNONYMS - ATP:(R)-pantothenate 4'-phosphotransferase activity SYNONYMS - ATP:pantothenate 4'-phosphotransferase activity SYNONYMS - D-pantothenate kinase activity SYNONYMS - pantothenate kinase (phosphorylating) activity SYNONYMS - pantothenic acid kinase activity // UNIQUE-ID - GO:0004618 TYPES - GO:0016301 TYPES - GO:0016774 COMMON-NAME - phosphoglycerate kinase activity SYNONYMS - 3-PGK SYNONYMS - 3-phosphoglycerate kinase activity SYNONYMS - 3-phosphoglycerate phosphokinase activity SYNONYMS - 3-phosphoglyceric acid kinase activity SYNONYMS - 3-phosphoglyceric acid phosphokinase activity SYNONYMS - 3-phosphoglyceric kinase activity SYNONYMS - ATP-3-phospho-D-glycerate-1-phosphotransferase activity SYNONYMS - ATP:3-phospho-D-glycerate 1-phosphotransferase activity SYNONYMS - ATP:D-3-phosphoglycerate 1-phosphotransferase activity SYNONYMS - glycerate 3-phosphate kinase activity SYNONYMS - glycerophosphate kinase activity SYNONYMS - PGK SYNONYMS - phosphoglyceric acid kinase activity SYNONYMS - phosphoglyceric kinase activity SYNONYMS - phosphoglycerokinase activity // UNIQUE-ID - GO:0004672 TYPES - GO:0016301 TYPES - GO:0016773 COMMON-NAME - protein kinase activity COMMENT - Note that triphosphate is used as a phosphate donor by at least one kinase. SYNONYMS - protamine kinase activity // UNIQUE-ID - GO:0004743 TYPES - GO:0016301 TYPES - GO:0016773 COMMON-NAME - pyruvate kinase activity SYNONYMS - ATP:pyruvate 2-O-phosphotransferase activity SYNONYMS - phosphoenol transphosphorylase activity SYNONYMS - phosphoenolpyruvate kinase activity // UNIQUE-ID - GO:0004756 TYPES - GO:0016301 TYPES - GO:0016781 COMMON-NAME - selenide, water dikinase activity SYNONYMS - ATP:selenide, water phosphotransferase activity SYNONYMS - selenide,water dikinase activity SYNONYMS - selenium donor protein activity SYNONYMS - selenophosphate synthase activity SYNONYMS - selenophosphate synthetase activity // UNIQUE-ID - GO:0004788 TYPES - GO:0016301 TYPES - GO:0016778 COMMON-NAME - thiamin diphosphokinase activity SYNONYMS - ATP:thiamin pyrophosphotransferase activity SYNONYMS - ATP:thiamine diphosphotransferase activity SYNONYMS - thiamin pyrophosphokinase activity SYNONYMS - thiamin pyrophosphotransferase activity SYNONYMS - thiamin:ATP pyrophosphotransferase activity SYNONYMS - thiamine diphosphokinase activity SYNONYMS - thiamine pyrophosphokinase activity SYNONYMS - thiaminokinase activity SYNONYMS - TPTase activity // UNIQUE-ID - GO:0008478 TYPES - GO:0016301 TYPES - GO:0016773 COMMON-NAME - pyridoxal kinase activity SYNONYMS - ATP:pyridoxal 5'-phosphotransferase activity SYNONYMS - pyridoxal 5-phosphate-kinase activity SYNONYMS - pyridoxal kinase (phosphorylating) SYNONYMS - pyridoxal phosphokinase activity SYNONYMS - pyridoxamine kinase activity SYNONYMS - pyridoxine kinase activity SYNONYMS - vitamin B(6) kinase activity SYNONYMS - vitamin B6 kinase activity // UNIQUE-ID - GO:0008531 TYPES - GO:0016301 TYPES - GO:0016773 COMMON-NAME - riboflavin kinase activity SYNONYMS - ATP:riboflavin 5'-phosphotransferase activity SYNONYMS - FK SYNONYMS - flavokinase activity SYNONYMS - riboflavin kinase (phosphorylating) SYNONYMS - riboflavine kinase activity // UNIQUE-ID - GO:0017050 TYPES - GO:0016301 COMMON-NAME - D-erythro-sphingosine kinase activity SYNONYMS - sphingosine kinase activity // UNIQUE-ID - GO:0019200 TYPES - GO:0016301 COMMON-NAME - carbohydrate kinase activity // UNIQUE-ID - GO:0019202 TYPES - GO:0016301 COMMON-NAME - amino acid kinase activity // UNIQUE-ID - GO:0019205 TYPES - GO:0016301 COMMON-NAME - nucleobase, nucleoside, nucleotide kinase activity // UNIQUE-ID - GO:0030387 TYPES - GO:0016301 COMMON-NAME - fructosamine-3-kinase activity // UNIQUE-ID - GO:0047620 TYPES - GO:0016301 TYPES - GO:0016773 COMMON-NAME - acylglycerol kinase activity SYNONYMS - ATP:acylglycerol 3-phosphotransferase activity SYNONYMS - MGK SYNONYMS - monoacylglycerol kinase (phosphorylating) SYNONYMS - monoacylglycerol kinase activity SYNONYMS - monoglyceride kinase activity SYNONYMS - monoglyceride phosphokinase activity SYNONYMS - sn-2-monoacylglycerol kinase activity // UNIQUE-ID - GO:0050201 TYPES - GO:0016301 TYPES - GO:0016773 COMMON-NAME - fucokinase activity SYNONYMS - ATP:6-deoxy-L-galactose 1-phosphotransferase activity SYNONYMS - ATP:beta-L-fucose 1-phosphotransferase activity SYNONYMS - fucokinase (phosphorylating) activity SYNONYMS - fucose kinase activity SYNONYMS - L-fucokinase activity SYNONYMS - L-fucose kinase activity // UNIQUE-ID - GO:0008481 TYPES - GO:0001727 TYPES - GO:0016773 COMMON-NAME - sphinganine kinase activity SYNONYMS - ATP:sphinganine 1-phosphotransferase activity SYNONYMS - dihydrosphingosine kinase (phosphorylating) SYNONYMS - dihydrosphingosine kinase activity SYNONYMS - sphingosine kinase (phosphorylating) SYNONYMS - sphingosine kinase activity // UNIQUE-ID - GO:0016307 TYPES - GO:0001727 TYPES - GO:0004428 TYPES - GO:0016773 COMMON-NAME - phosphatidylinositol phosphate kinase activity // UNIQUE-ID - GO:0035004 TYPES - GO:0001727 TYPES - GO:0004428 TYPES - GO:0016773 COMMON-NAME - phosphoinositide 3-kinase activity // UNIQUE-ID - GO:0004430 TYPES - GO:0004428 TYPES - GO:0016773 COMMON-NAME - 1-phosphatidylinositol 4-kinase activity SYNONYMS - ATP:1-phosphatidyl-1D-myo-inositol 4-phosphotransferase activity SYNONYMS - phosphatidylinositol 4-kinase activity SYNONYMS - phosphatidylinositol kinase (phosphorylating) activity SYNONYMS - phosphatidylinositol kinase activity SYNONYMS - PI 4-kinase activity SYNONYMS - PI kinase activity SYNONYMS - PI4-kinase activity SYNONYMS - PI4K SYNONYMS - PI4K-alpha activity SYNONYMS - PtdIns-4-kinase activity SYNONYMS - type II phosphatidylinositol kinase activity // UNIQUE-ID - GO:0051765 TYPES - GO:0004428 TYPES - GO:0016773 COMMON-NAME - inositol tetrakisphosphate kinase activity // UNIQUE-ID - GO:0051766 TYPES - GO:0004428 TYPES - GO:0016773 COMMON-NAME - inositol trisphosphate kinase activity // UNIQUE-ID - GO:0019199 TYPES - GO:0004672 TYPES - GO:0004888 COMMON-NAME - transmembrane receptor protein kinase activity // UNIQUE-ID - GO:0004697 TYPES - GO:0001565 TYPES - GO:0004674 COMMON-NAME - protein kinase C activity SYNONYMS - ATP:protein phosphotransferase (diacylglycerol-dependent) activity SYNONYMS - cPKC SYNONYMS - cPKCalpha SYNONYMS - cPKCbeta SYNONYMS - cPKCgamma SYNONYMS - diacylglycerol-activated phospholipid-dependent PKC activity SYNONYMS - diacylglycerol-activated phospholipid-dependent protein kinase C activity SYNONYMS - nPKC SYNONYMS - nPKCdelta SYNONYMS - nPKCepsilon SYNONYMS - nPKCeta SYNONYMS - nPKCtheta SYNONYMS - PKC SYNONYMS - PKC activity SYNONYMS - Pkc1p SYNONYMS - PKCalpha SYNONYMS - PKCbeta SYNONYMS - PKCdelta SYNONYMS - PKCepsilon SYNONYMS - PKCgamma SYNONYMS - PKCzeta SYNONYMS - protein kinase C activity SYNONYMS - protein kinase Cepsilon activity SYNONYMS - STK24 // UNIQUE-ID - GO:0004675 TYPES - GO:0004702 TYPES - GO:0019199 COMMON-NAME - transmembrane receptor protein serine/threonine kinase activity SYNONYMS - activin receptor kinase activity SYNONYMS - ATP:receptor-protein phosphotransferase activity SYNONYMS - receptor protein serine/threonine kinase activity SYNONYMS - receptor serine/threonine protein kinase activity SYNONYMS - receptor type I serine/threonine protein kinase activity SYNONYMS - receptor type II serine/threonine protein kinase activity SYNONYMS - STK13 SYNONYMS - TGF-beta kinase activity // UNIQUE-ID - GO:0004704 TYPES - GO:0004702 COMMON-NAME - NF-kappaB-inducing kinase activity SYNONYMS - NIK // UNIQUE-ID - GO:0004707 TYPES - GO:0004702 COMMON-NAME - MAP kinase activity SYNONYMS - ATP:protein phosphotransferase (MAPKK-activated) activity SYNONYMS - Dp38 SYNONYMS - ERK SYNONYMS - extracellular signal-regulated kinase activity SYNONYMS - LeMPK3 SYNONYMS - MAP-2 kinase activity SYNONYMS - MAPK SYNONYMS - MBP kinase I activity SYNONYMS - MBP kinase II activity SYNONYMS - microtubule-associated protein 2 kinase activity SYNONYMS - microtubule-associated protein kinase activity SYNONYMS - mitogen activated kinase activity SYNONYMS - mitogen-activated protein kinase activity SYNONYMS - myelin basic protein kinase activity SYNONYMS - p38-2 SYNONYMS - p38delta SYNONYMS - p42 mitogen-activated protein kinase activity SYNONYMS - p42mapk SYNONYMS - p44mpk SYNONYMS - PMK-1 SYNONYMS - PMK-2 SYNONYMS - PMK-3 SYNONYMS - pp42 SYNONYMS - pp44mapk SYNONYMS - STK26 // UNIQUE-ID - GO:0004709 TYPES - GO:0004702 COMMON-NAME - MAP kinase kinase kinase activity SYNONYMS - ATP:protein phosphotransferase (MAPKKKK-activated) activity SYNONYMS - cMos SYNONYMS - cRaf SYNONYMS - MAP3K SYNONYMS - MAPKKK activity SYNONYMS - MEK kinase activity SYNONYMS - MEKK SYNONYMS - MEKK1 SYNONYMS - MEKK2 SYNONYMS - MEKK3 SYNONYMS - Mil/Raf SYNONYMS - mitogen-activated protein kinase kinase kinase activity SYNONYMS - MLK-like mitogen-activated protein triple kinase activity SYNONYMS - MLTK SYNONYMS - MLTKa SYNONYMS - MLTKb SYNONYMS - REKS SYNONYMS - STK28 // UNIQUE-ID - GO:0004718 TYPES - GO:0004716 COMMON-NAME - Janus kinase activity SYNONYMS - JAK // UNIQUE-ID - GO:0004335 TYPES - GO:0016773 TYPES - GO:0019200 COMMON-NAME - galactokinase activity SYNONYMS - ATP:D-galactose 1-phosphotransferase activity SYNONYMS - ATP:D-galactose-1-phosphotransferase activity SYNONYMS - galactokinase (phosphorylating) // UNIQUE-ID - GO:0004396 TYPES - GO:0016773 TYPES - GO:0019200 COMMON-NAME - hexokinase activity SYNONYMS - ATP-dependent hexokinase activity SYNONYMS - ATP:D-hexose 6-phosphotransferase activity SYNONYMS - glucose ATP phosphotransferase activity SYNONYMS - hexokinase (phosphorylating) SYNONYMS - hexokinase D SYNONYMS - hexokinase type I activity SYNONYMS - hexokinase type II activity SYNONYMS - hexokinase type III activity SYNONYMS - hexokinase type IV SYNONYMS - hexokinase type IV (glucokinase) activity SYNONYMS - hexokinase type IV glucokinase activity // UNIQUE-ID - GO:0008443 TYPES - GO:0016773 TYPES - GO:0019200 COMMON-NAME - phosphofructokinase activity // UNIQUE-ID - GO:0009384 TYPES - GO:0016773 TYPES - GO:0019200 COMMON-NAME - N-acylmannosamine kinase activity SYNONYMS - acetylamidodeoxymannokinase activity SYNONYMS - acetylmannosamine kinase activity SYNONYMS - acylaminodeoxymannokinase activity SYNONYMS - acylmannosamine kinase (phosphorylating) SYNONYMS - acylmannosamine kinase activity SYNONYMS - ATP:N-acetylmannosamine 6-phosphotransferase activity SYNONYMS - ATP:N-acyl-D-mannosamine 6-phosphotransferase activity SYNONYMS - N-acetylmannosamine kinase activity SYNONYMS - N-acyl-D-mannosamine kinase activity // UNIQUE-ID - GO:0004349 TYPES - GO:0016774 TYPES - GO:0019202 COMMON-NAME - glutamate 5-kinase activity SYNONYMS - ATP-L-glutamate 5-phosphotransferase activity SYNONYMS - ATP:gamma-L-glutamate phosphotransferase activity SYNONYMS - ATP:L-glutamate 5-phosphotransferase activity SYNONYMS - gamma-glutamate kinase activity SYNONYMS - gamma-glutamyl kinase activity SYNONYMS - glutamate kinase activity // UNIQUE-ID - GO:0004550 TYPES - GO:0016776 TYPES - GO:0019205 COMMON-NAME - nucleoside diphosphate kinase activity SYNONYMS - ATP:nucleoside-diphosphate phosphotransferase activity SYNONYMS - NDK activity SYNONYMS - nucleoside 5'-diphosphate kinase activity SYNONYMS - nucleoside 5'-diphosphate phosphotransferase activity SYNONYMS - nucleoside diphosphate (UDP) kinase activity SYNONYMS - nucleoside diphosphokinase activity SYNONYMS - nucleoside-diphosphate kinase activity SYNONYMS - nucleotide phosphate kinase activity SYNONYMS - UDP kinase activity SYNONYMS - uridine diphosphate kinase activity // UNIQUE-ID - GO:0046899 TYPES - GO:0016776 TYPES - GO:0019205 COMMON-NAME - nucleoside triphosphate adenylate kinase activity SYNONYMS - GTP:AMP phosphotransferase SYNONYMS - guanosine triphosphate-adenylate kinase SYNONYMS - isozyme 3 of adenylate kinase activity SYNONYMS - nucleoside triphosphate-adenosine monophosphate transphosphorylase activity SYNONYMS - nucleoside-triphosphate-adenylate kinase activity SYNONYMS - nucleoside-triphosphate:AMP phosphotransferase activity // UNIQUE-ID - GO:0051731 TYPES - GO:0016773 TYPES - GO:0019205 COMMON-NAME - polynucleotide kinase activity SYNONYMS - 5'-dephosphopolynucleotide kinase activity SYNONYMS - 5'-hydroxyl polynucleotide kinase activity SYNONYMS - PNK SYNONYMS - polynucleotide 5'-hydroxy-kinase activity SYNONYMS - polynucleotide 5'-hydroxyl kinase (phosphorylating) activity SYNONYMS - polynucleotide 5'-hydroxyl-kinase activity // UNIQUE-ID - GO:0004017 TYPES - GO:0016776 TYPES - GO:0019201 COMMON-NAME - adenylate kinase activity SYNONYMS - 5'-AMP-kinase activity SYNONYMS - adenylic kinase activity SYNONYMS - adenylokinase activity SYNONYMS - ATP:AMP phosphotransferase activity SYNONYMS - myokinase activity // UNIQUE-ID - GO:0004385 TYPES - GO:0016776 TYPES - GO:0019201 COMMON-NAME - guanylate kinase activity SYNONYMS - 5'-GMP kinase activity SYNONYMS - ATP:(d)GMP phosphotransferase activity SYNONYMS - ATP:GMP phosphotransferase activity SYNONYMS - deoxyguanylate kinase activity SYNONYMS - GMP kinase activity SYNONYMS - guanosine monophosphate kinase activity SYNONYMS - membrane-associated guanylate kinase // UNIQUE-ID - GO:0004798 TYPES - GO:0016776 TYPES - GO:0019201 COMMON-NAME - thymidylate kinase activity SYNONYMS - ATP:dTMP phosphotransferase activity SYNONYMS - deoxythymidine 5'-monophosphate kinase activity SYNONYMS - dTMP kinase activity SYNONYMS - thymidine 5'-monophosphate kinase activity SYNONYMS - thymidine monophosphate kinase activity SYNONYMS - thymidylate monophosphate kinase activity SYNONYMS - thymidylic acid kinase activity SYNONYMS - thymidylic kinase activity SYNONYMS - TMPK activity // UNIQUE-ID - GO:0004749 TYPES - GO:0016778 COMMON-NAME - ribose phosphate diphosphokinase activity SYNONYMS - 5-phosphoribose pyrophosphorylase activity SYNONYMS - 5-phosphoribosyl-1-pyrophosphate synthetase activity SYNONYMS - 5-phosphoribosyl-alpha-1-pyrophosphate synthetase activity SYNONYMS - ATP:D-ribose-5-phosphate diphosphotransferase activity SYNONYMS - phosphoribosyl diphosphate synthetase activity SYNONYMS - phosphoribosyl pyrophosphate synthetase activity SYNONYMS - phosphoribosyl-diphosphate synthetase activity SYNONYMS - phosphoribosylpyrophosphate synthase activity SYNONYMS - phosphoribosylpyrophosphate synthetase activity SYNONYMS - PP-ribose P synthetase activity SYNONYMS - PPRibP synthetase activity SYNONYMS - PRPP synthetase activity SYNONYMS - pyrophosphoribosylphosphate synthetase activity SYNONYMS - ribophosphate pyrophosphokinase activity SYNONYMS - ribose-5-phosphate pyrophosphokinase activity SYNONYMS - ribose-phosphate diphosphokinase activity SYNONYMS - ribose-phosphate pyrophosphokinase activity // UNIQUE-ID - GO:0003912 TYPES - GO:0016779 COMMON-NAME - DNA nucleotidylexotransferase activity SYNONYMS - addase activity SYNONYMS - deoxynucleotidyl terminal transferase activity SYNONYMS - deoxyribonucleic acid nucleotidyltransferase activity SYNONYMS - deoxyribonucleic nucleotidyltransferase activity SYNONYMS - nucleoside-triphosphate:DNA deoxynucleotidylexotransferase activity SYNONYMS - TdT SYNONYMS - terminal addition enzyme activity SYNONYMS - terminal deoxynucleotide transferase activity SYNONYMS - terminal deoxynucleotidyltransferase activity SYNONYMS - terminal deoxyribonucleotidyltransferase activity SYNONYMS - terminal transferase activity // UNIQUE-ID - GO:0004654 TYPES - GO:0016779 COMMON-NAME - polyribonucleotide nucleotidyltransferase activity SYNONYMS - nucleoside diphosphate:polynucleotidyl transferase activity SYNONYMS - polynucleotide phosphorylase activity SYNONYMS - polyribonucleotide phosphorylase activity SYNONYMS - polyribonucleotide:phosphate nucleotidyltransferase activity // UNIQUE-ID - GO:0004810 TYPES - GO:0016779 COMMON-NAME - tRNA adenylyltransferase activity SYNONYMS - -C-C-A pyrophosphorylase SYNONYMS - ATP (CTP):tRNA nucleotidyltransferase SYNONYMS - ATP(CTP)-tRNA nucleotidyltransferase SYNONYMS - ATP:tRNA adenylyltransferase activity SYNONYMS - CCA-adding enzyme activity SYNONYMS - CTP(ATP):tRNA nucleotidyltransferase SYNONYMS - ribonucleic cytidylic cytidylic adenylic pyrophosphorylase SYNONYMS - ribonucleic cytidylyltransferase SYNONYMS - transfer ribonucleate adenyltransferase activity SYNONYMS - transfer ribonucleate adenylyltransferase SYNONYMS - transfer ribonucleate cytidylyltransferase SYNONYMS - transfer ribonucleate nucleotidyltransferase SYNONYMS - transfer ribonucleic acid nucleotidyl transferase SYNONYMS - transfer ribonucleic adenylyl (cytidylyl) transferase SYNONYMS - transfer ribonucleic-terminal trinucleotide nucleotidyltransferase SYNONYMS - transfer RNA adenylyltransferase SYNONYMS - transfer-RNA nucleotidyltransferase SYNONYMS - tRNA adenylyl(cytidylyl)transferase SYNONYMS - tRNA CCA-diphosphorylase activity SYNONYMS - tRNA CCA-pyrophosphorylase activity SYNONYMS - tRNA-nucleotidyltransferase activity // UNIQUE-ID - GO:0008192 TYPES - GO:0016779 COMMON-NAME - RNA guanylyltransferase activity // UNIQUE-ID - GO:0008781 TYPES - GO:0016779 COMMON-NAME - N-acylneuraminate cytidylyltransferase activity SYNONYMS - acetylneuraminate cytidylyltransferase activity SYNONYMS - acylneuraminate cytidyltransferase activity SYNONYMS - CMP-N-acetylneuraminate synthase activity SYNONYMS - CMP-N-acetylneuraminate synthetase activity SYNONYMS - CMP-N-acetylneuraminic acid synthase activity SYNONYMS - CMP-N-acetylneuraminic acid synthetase activity SYNONYMS - CMP-NANA synthetase activity SYNONYMS - CMP-Neu5Ac synthetase activity SYNONYMS - CMP-NeuAc synthetase activity SYNONYMS - CMP-NeuNAc synthetase activity SYNONYMS - CMP-sialate diphosphorylase activity SYNONYMS - CMP-sialate pyrophosphorylase activity SYNONYMS - CMP-sialate synthase activity SYNONYMS - CMP-sialate synthetase activity SYNONYMS - CMP-sialic acid synthetase activity SYNONYMS - CMP-sialic synthetase activity SYNONYMS - CTP:N-acylneuraminate cytidylyltransferase activity SYNONYMS - cytidine 5'-monophospho-N-acetylneuraminic acid synthetase activity SYNONYMS - cytidine 5'-monophosphosialic acid synthetase activity SYNONYMS - cytidine 5-monophosphate N-acetylneuraminic acid synthetase activity SYNONYMS - cytidine monophosphoacetylneuraminic synthetase activity SYNONYMS - cytidine monophosphosialate pyrophosphorylase activity SYNONYMS - cytidine monophosphosialate synthetase activity SYNONYMS - cytidine monophosphosialic acid synthetase activity // UNIQUE-ID - GO:0009022 TYPES - GO:0016779 COMMON-NAME - tRNA nucleotidyltransferase activity SYNONYMS - phosphate-dependent exonuclease activity SYNONYMS - ribonuclease PH activity SYNONYMS - RNase PH activity SYNONYMS - tRNA:phosphate nucleotidyltransferase activity // UNIQUE-ID - GO:0017125 TYPES - GO:0016779 COMMON-NAME - deoxycytidyl transferase activity SYNONYMS - deoxycytidyl transferase activity, template-dependent // UNIQUE-ID - GO:0034061 TYPES - GO:0016779 COMMON-NAME - DNA polymerase activity SYNONYMS - deoxynucleate polymerase activity SYNONYMS - deoxyribonucleate nucleotidyltransferase activity SYNONYMS - deoxyribonucleic acid polymerase activity SYNONYMS - deoxyribonucleic polymerase activity SYNONYMS - DNA nucleotidyltransferase activity SYNONYMS - DNA polymerase activity // UNIQUE-ID - GO:0034062 TYPES - GO:0016779 COMMON-NAME - RNA polymerase activity SYNONYMS - C ribonucleic acid formation factors SYNONYMS - C RNA formation factors SYNONYMS - ribonucleate nucleotidyltransferase activity SYNONYMS - ribonucleate polymerase activity SYNONYMS - ribonucleic acid nucleotidyltransferase SYNONYMS - ribonucleic acid polymerase activity SYNONYMS - ribonucleic acid transcriptase activity SYNONYMS - ribonucleic polymerase activity SYNONYMS - ribonucleic transcriptase activity SYNONYMS - RNA nucleotidyltransferase activity SYNONYMS - RNA transcriptase activityy SYNONYMS - transcriptase // UNIQUE-ID - GO:0047341 TYPES - GO:0016779 COMMON-NAME - fucose-1-phosphate guanylyltransferase activity SYNONYMS - GDP fucose pyrophosphorylase activity SYNONYMS - GDP-fucose diphosphorylase activity SYNONYMS - GDP-fucose pyrophosphorylase activity SYNONYMS - GDP-L-fucose pyrophosphorylase activity SYNONYMS - GTP:beta-L-fucose-1-phosphate guanylyltransferase activity SYNONYMS - GTP:fucose-1-phosphate guanylyltransferase activity SYNONYMS - GTP:L-fucose-1-phosphate guanylyltransferase activity SYNONYMS - guanosine diphosphate L-fucose pyrophosphorylase activity // UNIQUE-ID - GO:0050265 TYPES - GO:0016779 COMMON-NAME - RNA uridylyltransferase activity SYNONYMS - terminal uridylyltransferase activity SYNONYMS - TUT activity SYNONYMS - UTP:RNA uridylyltransferase activity // UNIQUE-ID - GO:0070566 TYPES - GO:0016779 COMMON-NAME - adenylyltransferase activity // UNIQUE-ID - GO:0070567 TYPES - GO:0016779 COMMON-NAME - cytidylyltransferase activity // UNIQUE-ID - GO:0070569 TYPES - GO:0016779 COMMON-NAME - uridylyltransferase activity // UNIQUE-ID - GO:0003975 TYPES - GO:0016780 COMMON-NAME - UDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase activity SYNONYMS - chitobiosylpyrophosphoryldolichol synthase activity SYNONYMS - dolichol phosphate N-acetylglucosamine-1-phosphotransferase activity SYNONYMS - GlcNAc-1-P transferase activity SYNONYMS - N-acetylglucosamine-1-phosphate transferase activity SYNONYMS - UDP-acetylglucosamine-dolichol phosphate acetylglucosamine phosphotransferase activity SYNONYMS - UDP-acetylglucosamine-dolichol phosphate acetylglucosamine-1-phosphotransferase activity SYNONYMS - UDP-D-N-acetylglucosamine N-acetylglucosamine 1-phosphate transferase activity SYNONYMS - UDP-GlcNAc:dolichyl-phosphate GlcNAc-1-phosphate transferase activity SYNONYMS - UDP-N-acetyl-D-glucosamine:dolichol phosphate N-acetyl-D-glucosamine-1-phosphate transferase activity SYNONYMS - UDP-N-acetyl-D-glucosamine:dolichyl-phosphate N-acetyl-D-glucosaminephosphotransferase activity SYNONYMS - UDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosamine-1-phosphate transferase activity SYNONYMS - uridine diphosphoacetylglucosamine-dolichyl phosphate acetylglucosamine-1-phosphotransferase activity // UNIQUE-ID - GO:0047493 TYPES - GO:0016780 COMMON-NAME - ceramide cholinephosphotransferase activity SYNONYMS - CDP-choline:N-acylsphingosine cholinephosphotransferase activity SYNONYMS - phosphorylcholine-ceramide transferase activity // UNIQUE-ID - GO:0051377 TYPES - GO:0016780 COMMON-NAME - mannose-ethanolamine phosphotransferase activity SYNONYMS - addition of ethanolamine phosphate to mannose of GPI precursor SYNONYMS - ethanolamine phosphate transferase activity SYNONYMS - EtN-P transferase activity SYNONYMS - phosphoethanolamine transferase activity // UNIQUE-ID - GO:0004062 TYPES - GO:0008146 COMMON-NAME - aryl sulfotransferase activity SYNONYMS - 1-naphthol phenol sulfotransferase activity SYNONYMS - 2-naphtholsulfotransferase activity SYNONYMS - 3'-phosphoadenylyl-sulfate:phenol sulfotransferase activity SYNONYMS - 4-nitrocatechol sulfokinase activity SYNONYMS - aryl sulphotransferase activity SYNONYMS - arylsulfotransferase SYNONYMS - dopamine sulfotransferase activity SYNONYMS - p-nitrophenol sulfotransferase activity SYNONYMS - phenol sulfokinase activity SYNONYMS - phenol sulfotransferase activity SYNONYMS - PST SYNONYMS - ritodrine sulfotransferase activity SYNONYMS - sulfokinase activity // UNIQUE-ID - GO:0008459 TYPES - GO:0008146 COMMON-NAME - chondroitin 6-sulfotransferase activity SYNONYMS - 3'-phosphoadenosine 5'-phosphosulfate (PAPS):chondroitin sulfate sulfotransferase activity SYNONYMS - 3'-phosphoadenylyl-sulfate:chondroitin 6'-sulfotransferase activity SYNONYMS - chondroitin 6-O-sulfotransferase activity SYNONYMS - chondroitin 6-sulphotransferase activity SYNONYMS - terminal 6-sulfotransferase activity // UNIQUE-ID - GO:0008467 TYPES - GO:0008146 COMMON-NAME - heparin-glucosamine 3-O-sulfotransferase activity SYNONYMS - 3'-phosphoadenylyl-sulfate:[heparan sulfate]-glucosamine 3-sulfotransferase SYNONYMS - 3'-phosphoadenylyl-sulfate:heparin-glucosamine 3-O-sulfotransferase activity SYNONYMS - 3-OST-1 activity SYNONYMS - [heparan sulfate]-glucosamine 3-sulfotransferase 1 SYNONYMS - glucosaminyl 3-O-sulfotransferase activity SYNONYMS - heparan sulfate D-glucosaminyl 3-O-sulfotransferase activity SYNONYMS - heparin-glucosamine 3-O-sulphotransferase activity SYNONYMS - isoform/isozyme 1 (3-OST-1, HS3ST1) // UNIQUE-ID - GO:0015016 TYPES - GO:0008146 COMMON-NAME - [heparan sulfate]-glucosamine N-sulfotransferase activity COMMENT - Note that this activity includes EC:2.8.2.12 (deleted from EC). SYNONYMS - 3'-phosphoadenylyl-sulfate:[heparan sulfate]-glucosamine N-sulfotransferase activity SYNONYMS - 3'-phosphoadenylyl-sulfate:heparitin N-sulfotransferase activity SYNONYMS - 3'-phosphoadenylyl-sulfate:N-desulfoheparin N-sulfotransferase activity SYNONYMS - 3'-phosphoadenylylsulfate:N-desulfoheparin sulfotransferase activity SYNONYMS - [heparan sulphate]-glucosamine N-sulphotransferase activity SYNONYMS - desulfoheparin sulfotransferase activity SYNONYMS - glucosaminyl N-deacetylase/N-sulfotransferase activity SYNONYMS - heparan sulfate 2-N-sulfotransferase activity SYNONYMS - heparan sulfate N-deacetylase/N-sulfotransferase activity SYNONYMS - heparan sulfate N-sulfotransferase activity SYNONYMS - heparan sulfate sulfotransferase activity SYNONYMS - heparin N-deacetylase/N-sulfotransferase activity SYNONYMS - heparin N-deacetylase/N-sulphotransferase activity SYNONYMS - heparin N-sulfotransferase activity SYNONYMS - N-desulfoheparin sulfotransferase activity SYNONYMS - N-heparan sulfate sulfotransferase activity SYNONYMS - N-HSST activity SYNONYMS - PAPS:DSH sulfotransferase activity SYNONYMS - PAPS:N-desulfoheparin sulfotransferase activity // UNIQUE-ID - GO:0017067 TYPES - GO:0008146 COMMON-NAME - tyrosine-ester sulfotransferase activity SYNONYMS - 3'-phosphoadenylyl-sulfate:L-tyrosine-methyl-ester sulfotransferase activity SYNONYMS - aryl sulfotransferase IV SYNONYMS - L-tyrosine methyl ester sulfotransferase activity SYNONYMS - tyrosine-ester sulphotransferase activity // UNIQUE-ID - GO:0045130 TYPES - GO:0008146 COMMON-NAME - keratan sulfotransferase activity SYNONYMS - 3'-phosphoadenylyl keratan sulfotransferase activity SYNONYMS - 3'-phosphoadenylyl-sulfate:keratan 6'-sulfotransferase activity SYNONYMS - 3'-phosphoadenylylsulfate:keratan sulfotransferase activity SYNONYMS - keratan sulfate Gal-6-sulfotransferase activity SYNONYMS - keratan sulfate sulfotransferase activity SYNONYMS - keratan sulphotransferase activity // UNIQUE-ID - GO:0047685 TYPES - GO:0008146 COMMON-NAME - amine sulfotransferase activity SYNONYMS - 3'-phosphoadenylyl-sulfate:amine N-sulfotransferase activity SYNONYMS - amine N-sulfotransferase activity SYNONYMS - amine sulphotransferase activity SYNONYMS - arylamine sulfotransferase activity // UNIQUE-ID - GO:0047704 TYPES - GO:0008146 COMMON-NAME - bile-salt sulfotransferase activity SYNONYMS - 3'-phosphoadenylyl-sulfate:glycolithocholate sulfotransferase activity SYNONYMS - BAST I activity SYNONYMS - bile acid sulfotransferase I activity SYNONYMS - bile acid:3'-phosphoadenosine-5'-phosphosulfate sulfotransferase activity SYNONYMS - bile salt:3'phosphoadenosine-5'-phosphosulfate:sulfotransferase activity SYNONYMS - bile-salt sulphotransferase activity SYNONYMS - glycolithocholate sulfotransferase activity // UNIQUE-ID - GO:0047756 TYPES - GO:0008146 COMMON-NAME - chondroitin 4-sulfotransferase activity SYNONYMS - 3'-phosphoadenylyl-sulfate:chondroitin 4'-sulfotransferase activity SYNONYMS - chondroitin 4-sulphotransferase activity SYNONYMS - chondroitin sulfotransferase activity // UNIQUE-ID - GO:0050694 TYPES - GO:0008146 COMMON-NAME - galactose 3-O-sulfotransferase activity SYNONYMS - Gal-3-O-sulfotransferase activity SYNONYMS - galactose 3-O-sulphotransferase activity // UNIQUE-ID - GO:0016784 TYPES - GO:0016783 COMMON-NAME - 3-mercaptopyruvate sulfurtransferase activity SYNONYMS - 3-mercaptopyruvate sulphurtransferase activity SYNONYMS - 3-mercaptopyruvate:cyanide sulfurtransferase activity SYNONYMS - beta-mercaptopyruvate sulfurtransferase activity SYNONYMS - mercaptopyruvate sulfurtransferase activity // UNIQUE-ID - GO:0031071 TYPES - GO:0016783 COMMON-NAME - cysteine desulfurase activity SYNONYMS - cysteine desulfurylase activity SYNONYMS - IscS SYNONYMS - L-cysteine:enzyme cysteine sulfurtransferase activity SYNONYMS - NIFS SYNONYMS - NifS SYNONYMS - SufS // UNIQUE-ID - GO:0004240 TYPES - GO:0004222 TYPES - GO:0009003 COMMON-NAME - mitochondrial processing peptidase activity SYNONYMS - alpha-mitochondrial processing peptidase SYNONYMS - beta-mitochondrial processing peptidase SYNONYMS - matrix peptidase SYNONYMS - matrix processing peptidase SYNONYMS - matrix processing proteinase SYNONYMS - mitochondrial protein precursor-processing proteinase activity SYNONYMS - MPP SYNONYMS - processing enhancing peptidase (for one of two subunits) SYNONYMS - processing enhancing peptidase activity // UNIQUE-ID - GO:0009049 TYPES - GO:0004190 TYPES - GO:0009003 COMMON-NAME - aspartic-type signal peptidase activity // UNIQUE-ID - GO:0004175 TYPES - GO:0070011 COMMON-NAME - endopeptidase activity SYNONYMS - proteasome endopeptidase core SYNONYMS - proteasome endopeptidase regulator SYNONYMS - endoprotease SYNONYMS - proteasome endopeptidase activity SYNONYMS - proteinase // UNIQUE-ID - GO:0004176 TYPES - GO:0070011 COMMON-NAME - ATP-dependent peptidase activity // UNIQUE-ID - GO:0008234 TYPES - GO:0070011 COMMON-NAME - cysteine-type peptidase activity SYNONYMS - cysteine protease activity SYNONYMS - thiol protease activity // UNIQUE-ID - GO:0008237 TYPES - GO:0070011 COMMON-NAME - metallopeptidase activity // UNIQUE-ID - GO:0008238 TYPES - GO:0070011 COMMON-NAME - exopeptidase activity SYNONYMS - exoprotease activity // UNIQUE-ID - GO:0004252 TYPES - GO:0004175 TYPES - GO:0008236 COMMON-NAME - serine-type endopeptidase activity SYNONYMS - blood coagulation factor activity SYNONYMS - serine protease activity // UNIQUE-ID - GO:0004274 TYPES - GO:0008236 TYPES - GO:0008239 COMMON-NAME - dipeptidyl-peptidase IV activity SYNONYMS - amino acyl-prolyl dipeptidyl aminopeptidase activity SYNONYMS - dipeptidyl aminopeptidase IV activity SYNONYMS - dipeptidyl peptidase IV SYNONYMS - dipeptidyl-aminopeptidase IV SYNONYMS - dipeptidyl-peptide hydrolase activity SYNONYMS - DPP IV activity SYNONYMS - DPP IV/CD26 SYNONYMS - Gly-Pro naphthylamidase activity SYNONYMS - glycoprotein GP110 SYNONYMS - glycylproline aminopeptidase activity SYNONYMS - glycylprolyl aminopeptidase activity SYNONYMS - glycylprolyl dipeptidylaminopeptidase activity SYNONYMS - leukocyte antigen CD26 SYNONYMS - lymphocyte antigen CD26 SYNONYMS - pep X SYNONYMS - post-proline dipeptidyl aminopeptidase IV activity SYNONYMS - postproline dipeptidyl aminopeptidase IV SYNONYMS - T cell triggering molecule Tp103 SYNONYMS - X-PDAP SYNONYMS - Xaa-Pro-dipeptidyl-aminopeptidase activity SYNONYMS - Xaa-Pro-dipeptidylaminopeptidase activity // UNIQUE-ID - GO:0008240 TYPES - GO:0008236 COMMON-NAME - tripeptidyl-peptidase activity // UNIQUE-ID - GO:0070008 TYPES - GO:0008236 TYPES - GO:0008238 COMMON-NAME - serine-type exopeptidase activity // UNIQUE-ID - GO:0003847 TYPES - GO:0004091 COMMON-NAME - 1-alkyl-2-acetylglycerophosphocholine esterase activity SYNONYMS - 1-alkyl-2-acetyl-sn-glycero-3-phosphocholine acetohydrolase activity SYNONYMS - 1-alkyl-2-acetyl-sn-glycero-3-phosphocholine acetylhydrolase activity SYNONYMS - 2-acetyl-1-alkylglycerophosphocholine esterase activity SYNONYMS - alkylacetyl-GPC:acetylhydrolase activity SYNONYMS - LDL-associated phospholipase A(2) activity SYNONYMS - LDL-associated phospholipase A2 SYNONYMS - LDL-PLA(2) activity SYNONYMS - LDL-PLA2 SYNONYMS - PAF 2-acylhydrolase activity SYNONYMS - PAF acetylhydrolase activity SYNONYMS - platelet-activating factor acetylhydrolase activity // UNIQUE-ID - GO:0004064 TYPES - GO:0004091 COMMON-NAME - arylesterase activity SYNONYMS - A-esterase activity SYNONYMS - aromatic esterase SYNONYMS - aryl-ester hydrolase SYNONYMS - paraoxonase activity // UNIQUE-ID - GO:0004104 TYPES - GO:0004091 COMMON-NAME - cholinesterase activity SYNONYMS - acylcholine acylhydrolase activity SYNONYMS - anticholineesterase activity SYNONYMS - benzoylcholinesterase activity SYNONYMS - BtChoEase activity SYNONYMS - butyrylcholine esterase activity SYNONYMS - butyrylcholinesterase activity SYNONYMS - choline esterase activity SYNONYMS - choline esterase II (unspecific) activity SYNONYMS - non-specific cholinesterase activity SYNONYMS - propionylcholinesterase activity SYNONYMS - pseudocholinesterase activity // UNIQUE-ID - GO:0004465 TYPES - GO:0004091 TYPES - GO:0016298 COMMON-NAME - lipoprotein lipase activity SYNONYMS - clearing factor lipase activity SYNONYMS - diacylglycerol hydrolase activity SYNONYMS - diacylglycerol lipase activity SYNONYMS - diglyceride lipase activity SYNONYMS - lipemia-clearing factor SYNONYMS - postheparin esterase activity SYNONYMS - postheparin lipase activity SYNONYMS - triacylglycero-protein acylhydrolase activity // UNIQUE-ID - GO:0004622 TYPES - GO:0004091 TYPES - GO:0004620 COMMON-NAME - lysophospholipase activity SYNONYMS - 2-lysophosphatidylcholine acylhydrolase activity SYNONYMS - lecithinase B activity SYNONYMS - lecitholipase activity SYNONYMS - lysolecithinase activity SYNONYMS - lysophopholipase L2 SYNONYMS - lysophosphatidase activity SYNONYMS - lysophosphatidylcholine hydrolase activity SYNONYMS - lysophospholipase A1 SYNONYMS - phosphatidase B SYNONYMS - phospholipase B activity // UNIQUE-ID - GO:0004623 TYPES - GO:0004091 TYPES - GO:0004620 COMMON-NAME - phospholipase A2 activity SYNONYMS - cytosolic phospholipase A2 activity SYNONYMS - lecithinase A activity SYNONYMS - phosphatidase activity SYNONYMS - phosphatidolipase activity SYNONYMS - phosphatidylcholine 2-acylhydrolase activity SYNONYMS - phospholipase A SYNONYMS - phospholipase A2 activity SYNONYMS - secreted phospholipase A2 activity // UNIQUE-ID - GO:0004771 TYPES - GO:0004091 COMMON-NAME - sterol esterase activity SYNONYMS - acylcholesterol lipase activity SYNONYMS - cholesterase activity SYNONYMS - cholesterol ester hydrolase activity SYNONYMS - cholesterol ester synthase activity SYNONYMS - cholesterol esterase activity SYNONYMS - cholesteryl ester hydrolase activity SYNONYMS - cholesteryl ester synthase activity SYNONYMS - cholesteryl esterase activity SYNONYMS - sterol ester hydrolase activity SYNONYMS - steryl-ester acylhydrolase activity SYNONYMS - triterpenol esterase activity // UNIQUE-ID - GO:0004806 TYPES - GO:0004091 TYPES - GO:0016298 COMMON-NAME - triacylglycerol lipase activity SYNONYMS - amano AP SYNONYMS - amano B SYNONYMS - amano CE SYNONYMS - amano CES SYNONYMS - amano P SYNONYMS - amno N-AP SYNONYMS - butyrinase activity SYNONYMS - cacordase activity SYNONYMS - capalase L SYNONYMS - GA 56 SYNONYMS - GEH SYNONYMS - glycerol ester hydrolase activity SYNONYMS - glycerol-ester hydrolase activity SYNONYMS - heparin releasable hepatic lipase SYNONYMS - hepatic lipase SYNONYMS - hepatic monoacylglycerol acyltransferase SYNONYMS - lipazin SYNONYMS - liver lipase SYNONYMS - meito MY 30 SYNONYMS - meito sangyo OF lipase SYNONYMS - post-heparin plasma protamine-resistant lipase SYNONYMS - PPL SYNONYMS - salt-resistant post-heparin lipase SYNONYMS - steapsin SYNONYMS - takedo 1969-4-9 SYNONYMS - triacetinase activity SYNONYMS - triacylglycerol acylhydrolase activity SYNONYMS - triacylglycerol ester hydrolase activity SYNONYMS - tributyrase activity SYNONYMS - tributyrin esterase activity SYNONYMS - tributyrinase activity SYNONYMS - triglyceridase activity SYNONYMS - triglyceride hydrolase activity SYNONYMS - triglyceride lipase activity SYNONYMS - triolein hydrolase activity SYNONYMS - tween hydrolase activity SYNONYMS - tween-hydrolyzing esterase activity SYNONYMS - tweenase activity SYNONYMS - tweenesterase activity // UNIQUE-ID - GO:0017057 TYPES - GO:0004091 COMMON-NAME - 6-phosphogluconolactonase activity SYNONYMS - 6-PGL SYNONYMS - 6-phospho-D-glucono-1,5-lactone lactonohydrolase activity SYNONYMS - phosphogluconolactonase activity // UNIQUE-ID - GO:0047372 TYPES - GO:0004091 TYPES - GO:0016298 COMMON-NAME - acylglycerol lipase activity SYNONYMS - fatty acyl monoester lipase activity SYNONYMS - glycerol-ester acylhydrolase activity SYNONYMS - monoacylglycerol hydrolase activity SYNONYMS - monoacylglycerol lipase activity SYNONYMS - monoacylglycerolipase activity SYNONYMS - monoglyceridase activity SYNONYMS - monoglyceride hydrolase activity SYNONYMS - monoglyceride lipase activity SYNONYMS - monoglyceridyllipase activity // UNIQUE-ID - GO:0050528 TYPES - GO:0004091 COMMON-NAME - acyloxyacyl hydrolase activity // UNIQUE-ID - GO:0004519 TYPES - GO:0004518 COMMON-NAME - endonuclease activity // UNIQUE-ID - GO:0004527 TYPES - GO:0004518 COMMON-NAME - exonuclease activity // UNIQUE-ID - GO:0004536 TYPES - GO:0004518 COMMON-NAME - deoxyribonuclease activity COMMENT - Consider also annotating to the molecular function term 'DNA binding ; GO:0003677'. // UNIQUE-ID - GO:0004540 TYPES - GO:0004518 COMMON-NAME - ribonuclease activity COMMENT - Consider also annotating to the molecular function term 'RNA binding ; GO:0003723'. // UNIQUE-ID - GO:0004065 TYPES - GO:0008484 COMMON-NAME - arylsulfatase activity SYNONYMS - 4-methylumbelliferyl sulfatase activity SYNONYMS - aryl-sulfate sulfohydrolase activity SYNONYMS - aryl-sulfate sulphohydrolase activity SYNONYMS - aryl-sulphate sulphohydrolase activity SYNONYMS - arylsulfohydrolase activity SYNONYMS - arylsulphatase activity SYNONYMS - estrogen sulfatase activity SYNONYMS - nitrocatechol sulfatase activity SYNONYMS - p-nitrophenyl sulfatase activity SYNONYMS - phenolsulfatase activity SYNONYMS - phenylsulfatase activity SYNONYMS - sulfatase activity // UNIQUE-ID - GO:0004098 TYPES - GO:0008484 COMMON-NAME - cerebroside-sulfatase activity SYNONYMS - arylsulfatase A activity SYNONYMS - cerebroside sulfate sulfatase activity SYNONYMS - cerebroside-3-sulfate 3-sulfohydrolase activity SYNONYMS - cerebroside-sulphatase activity // UNIQUE-ID - GO:0004620 TYPES - GO:0016298 COMMON-NAME - phospholipase activity // UNIQUE-ID - GO:0004221 TYPES - GO:0016790 COMMON-NAME - ubiquitin thiolesterase activity COMMENT - Note that this term is distinguished from its parent in that it specifically refers to hydrolysis of thiolester bonds. SYNONYMS - isopeptidase activity SYNONYMS - isopeptidase T SYNONYMS - ubiquitin C-terminal hydrolase activity SYNONYMS - ubiquitin carboxy-terminal esterase activity SYNONYMS - ubiquitin carboxy-terminal hydrolase activity SYNONYMS - ubiquitin thioesterase activity SYNONYMS - ubiquitin-C-terminal-thioester hydrolase activity SYNONYMS - ubiquitinyl hydrolase 1 activity // UNIQUE-ID - GO:0016289 TYPES - GO:0016790 COMMON-NAME - CoA hydrolase activity // UNIQUE-ID - GO:0018738 TYPES - GO:0016790 COMMON-NAME - S-formylglutathione hydrolase activity // UNIQUE-ID - GO:0008081 TYPES - GO:0042578 COMMON-NAME - phosphoric diester hydrolase activity SYNONYMS - endonuclease VIII activity SYNONYMS - phosphodiesterase // UNIQUE-ID - GO:0016791 TYPES - GO:0042578 COMMON-NAME - phosphatase activity SYNONYMS - phosphatase SYNONYMS - phosphatase activity // UNIQUE-ID - GO:0019198 TYPES - GO:0004721 TYPES - GO:0004888 COMMON-NAME - transmembrane receptor protein phosphatase activity // UNIQUE-ID - GO:0004566 TYPES - GO:0004553 COMMON-NAME - beta-glucuronidase activity SYNONYMS - beta-D-glucuronoside glucuronosohydrolase activity SYNONYMS - beta-glucuronide glucuronohydrolase activity SYNONYMS - exo-beta-D-glucuronidase activity SYNONYMS - glucuronidase activity SYNONYMS - ketodase activity // UNIQUE-ID - GO:0004568 TYPES - GO:0004553 COMMON-NAME - chitinase activity SYNONYMS - 1,4-beta-poly-N-acetylglucosaminidase activity SYNONYMS - beta-1,4-poly-N-acetyl glucosamidinase activity SYNONYMS - chitodextrinase activity SYNONYMS - poly-beta-glucosaminidase activity SYNONYMS - poly[1,4-(N-acetyl-beta-D-glucosaminide)] glycanohydrolase activity // UNIQUE-ID - GO:0015923 TYPES - GO:0004553 COMMON-NAME - mannosidase activity // UNIQUE-ID - GO:0015925 TYPES - GO:0004553 COMMON-NAME - galactosidase activity // UNIQUE-ID - GO:0015926 TYPES - GO:0004553 COMMON-NAME - glucosidase activity // UNIQUE-ID - GO:0015929 TYPES - GO:0004553 COMMON-NAME - hexosaminidase activity // UNIQUE-ID - GO:0016160 TYPES - GO:0004553 COMMON-NAME - amylase activity // UNIQUE-ID - GO:0016997 TYPES - GO:0004553 COMMON-NAME - alpha-sialidase activity // UNIQUE-ID - GO:0030305 TYPES - GO:0004553 COMMON-NAME - heparanase activity // UNIQUE-ID - GO:0003875 TYPES - GO:0016799 COMMON-NAME - ADP-ribosylarginine hydrolase activity SYNONYMS - ADP-ribose-L-arginine cleavage enzyme activity SYNONYMS - ADP-ribose-L-arginine cleaving enzyme activity SYNONYMS - ADPribosylarginine hydrolase activity SYNONYMS - N(omega)-(ADP-D-ribosyl)-L-arginine ADP-ribosylhydrolase activity SYNONYMS - nomega-(ADP-D-ribosyl)-L-arginine ADP-ribosylhydrolase activity SYNONYMS - omega-protein-N-(ADP-D-ribosyl)-L-arginine ADP-ribosylhydrolase activity SYNONYMS - protein ADP-ribosylarginine hydrolase activity SYNONYMS - protein-nomega-(ADP-D-ribosyl)-L-arginine ADP-ribosylhydrolase activity // UNIQUE-ID - GO:0019104 TYPES - GO:0016799 COMMON-NAME - DNA N-glycosylase activity COMMENT - Consider also annotating to the molecular function term 'damaged DNA binding ; GO:0003684'. SYNONYMS - DNA glycosylase activity SYNONYMS - endonuclease VIII activity // UNIQUE-ID - GO:0045437 TYPES - GO:0016799 COMMON-NAME - uridine nucleosidase activity SYNONYMS - uridine hydrolase activity SYNONYMS - uridine ribohydrolase activity // UNIQUE-ID - GO:0008534 TYPES - GO:0000702 TYPES - GO:0003906 COMMON-NAME - oxidized purine base lesion DNA N-glycosylase activity COMMENT - Consider also annotating to the molecular function term 'DNA-(apurinic or apyrimidinic site) lyase activity ; GO:0003906'. SYNONYMS - 2,6-diamino-4-hydroxy-5(N-methyl)formamidopyrimidine-DNA glycosylase activity SYNONYMS - 2,6-diamino-4-hydroxy-5N-formamidopyrimidine-DNA glycosylase activity SYNONYMS - 8-oxoguanine DNA glycosylase activity SYNONYMS - bifunctional DNA glycosylase activity SYNONYMS - deoxyribonucleate glycosidase activity SYNONYMS - DNA glycohydrolase [2,6-diamino-4-hydroxy-5-(N-methyl)formamidopyrimide releasing] SYNONYMS - DNA glycosylase/AP-lyase activity SYNONYMS - DNA glycosylase/beta-lyase activity SYNONYMS - DNA-formamidopyrimidine glycosylase activity SYNONYMS - fapy-DNA glycosylase activity SYNONYMS - Fapy-DNA glycosylase activity SYNONYMS - formamidopyrimidine-DNA glycosylase activity SYNONYMS - Fpg protein SYNONYMS - purine-specific oxidized base lesion DNA N-glycosylase activity // UNIQUE-ID - GO:0004301 TYPES - GO:0016803 COMMON-NAME - epoxide hydrolase activity SYNONYMS - arene-oxide hydratase activity SYNONYMS - aryl epoxide hydrase activity SYNONYMS - cytosolic epoxide hydrolase activity SYNONYMS - epoxide hydrase activity SYNONYMS - epoxide hydratase activity SYNONYMS - sEH SYNONYMS - soluble epoxide hydrolase activity SYNONYMS - trans-stilbene oxide hydrolase activity // UNIQUE-ID - GO:0004463 TYPES - GO:0016803 COMMON-NAME - leukotriene-A4 hydrolase activity SYNONYMS - (7E,9E,11Z,14Z)-(5S,6S)-5,6-epoxyicosa-7,9,11,14-tetraenoate hydrolase activity SYNONYMS - leukotriene A(4) hydrolase activity SYNONYMS - leukotriene A4 hydrolase activity SYNONYMS - leukotriene-A4 hydrolase activity SYNONYMS - LTA-4 hydrolase activity SYNONYMS - LTA4 hydrolase activity SYNONYMS - LTA4H // UNIQUE-ID - GO:0003837 TYPES - GO:0016811 COMMON-NAME - beta-ureidopropionase activity SYNONYMS - N-carbamoyl-beta-alanine amidohydrolase activity // UNIQUE-ID - GO:0004067 TYPES - GO:0016811 COMMON-NAME - asparaginase activity SYNONYMS - alpha-asparaginase activity SYNONYMS - asparaginase II SYNONYMS - colaspase activity SYNONYMS - crasnitin SYNONYMS - elspar SYNONYMS - L-asparaginase activity SYNONYMS - L-asparagine amidohydrolase activity SYNONYMS - leunase activity // UNIQUE-ID - GO:0004407 TYPES - GO:0016811 TYPES - GO:0033558 COMMON-NAME - histone deacetylase activity // UNIQUE-ID - GO:0008745 TYPES - GO:0016811 COMMON-NAME - N-acetylmuramoyl-L-alanine amidase activity SYNONYMS - acetylmuramoyl-alanine amidase activity SYNONYMS - acetylmuramyl-alanine amidase activity SYNONYMS - acetylmuramyl-L-alanine amidase activity SYNONYMS - murein hydrolase activity SYNONYMS - N-acetylmuramic acid L-alanine amidase activity SYNONYMS - N-acetylmuramoyl-L-alanine amidase type I SYNONYMS - N-acetylmuramoyl-L-alanine amidase type II SYNONYMS - N-acetylmuramyl-L-alanine amidase activity SYNONYMS - N-acetylmuramylalanine amidase activity SYNONYMS - N-acylmuramyl-L-alanine amidase activity SYNONYMS - peptidoglycan amidohydrolase activity // UNIQUE-ID - GO:0017040 TYPES - GO:0016811 COMMON-NAME - ceramidase activity SYNONYMS - acylsphingosine deacylase activity SYNONYMS - glycosphingolipid ceramide deacylase SYNONYMS - N-acylsphingosine amidohydrolase activity // UNIQUE-ID - GO:0019807 TYPES - GO:0016811 COMMON-NAME - aspartoacylase activity SYNONYMS - acetyl-aspartic deaminase activity SYNONYMS - acylase II SYNONYMS - aminoacylase II activity SYNONYMS - N-acetylaspartate amidohydrolase activity SYNONYMS - N-acyl-L-aspartate amidohydrolase activity // UNIQUE-ID - GO:0017168 TYPES - GO:0016812 COMMON-NAME - 5-oxoprolinase (ATP-hydrolyzing) activity SYNONYMS - 5-OPase activity SYNONYMS - 5-oxo-L-prolinase activity SYNONYMS - 5-oxo-L-proline amidohydrolase (ATP-hydrolysing) SYNONYMS - 5-oxoprolinase (ATP-hydrolysing) SYNONYMS - 5-oxoprolinase activity SYNONYMS - L-pyroglutamate hydrolase activity SYNONYMS - oxoprolinase activity SYNONYMS - pyroglutamase (ATP-hydrolysing) SYNONYMS - pyroglutamase (ATP-hydrolyzing) activity SYNONYMS - pyroglutamase activity SYNONYMS - pyroglutamate hydrolase activity SYNONYMS - pyroglutamic hydrolase activity // UNIQUE-ID - GO:0050480 TYPES - GO:0016812 COMMON-NAME - imidazolonepropionase activity SYNONYMS - 3-(5-oxo-4,5-dihydro-3H-imidazol-4-yl)propanoate amidohydrolase activity SYNONYMS - 4(5)-imidazolone-5(4)-propionic acid hydrolase activity SYNONYMS - imidazolone propionic acid hydrolase activity SYNONYMS - imidazolone-5-propionate hydrolase activity // UNIQUE-ID - GO:0004668 TYPES - GO:0016813 COMMON-NAME - protein-arginine deiminase activity SYNONYMS - peptidylarginine deiminase activity SYNONYMS - protein-L-arginine iminohydrolase activity // UNIQUE-ID - GO:0016403 TYPES - GO:0016813 COMMON-NAME - dimethylargininase activity SYNONYMS - dimethylarginine dimethylaminohydrolase activity SYNONYMS - N(G),N(G)-dimethylarginine dimethylaminohydrolase activity SYNONYMS - NG,NG-dimethyl-L-arginine dimethylamidohydrolase activity SYNONYMS - NG,NG-dimethylarginine dimethylaminohydrolase activity // UNIQUE-ID - GO:0019238 TYPES - GO:0016814 COMMON-NAME - cyclohydrolase activity // UNIQUE-ID - GO:0016462 TYPES - GO:0016818 COMMON-NAME - pyrophosphatase activity // UNIQUE-ID - GO:0004012 TYPES - GO:0015247 TYPES - GO:0042626 COMMON-NAME - phospholipid-translocating ATPase activity COMMENT - Consider also annotating to the molecular function term 'ATP binding ; GO:0005524'. SYNONYMS - aminophospholipid-transporting ATPase SYNONYMS - ATP phosphohydrolase (phospholipid-flipping) SYNONYMS - flippase activity SYNONYMS - magnesium-ATPase activity SYNONYMS - Mg(2+)-ATPase activity SYNONYMS - Mg2+-ATPase activity SYNONYMS - phospholipid translocating ATPase activity SYNONYMS - phospholipid-transporting ATPase activity // UNIQUE-ID - GO:0042625 TYPES - GO:0015075 TYPES - GO:0042626 COMMON-NAME - ATPase activity, coupled to transmembrane movement of ions // UNIQUE-ID - GO:0004334 TYPES - GO:0016823 COMMON-NAME - fumarylacetoacetase activity SYNONYMS - 4-fumarylacetoacetate fumarylhydrolase activity SYNONYMS - beta-diketonase activity SYNONYMS - fumarylacetoacetate hydrolase activity // UNIQUE-ID - GO:0030429 TYPES - GO:0016823 COMMON-NAME - kynureninase activity SYNONYMS - kynurenine hydrolase activity SYNONYMS - L-kynurenine hydrolase activity SYNONYMS - l-kynurenine hydrolase activity // UNIQUE-ID - GO:0004058 TYPES - GO:0016831 COMMON-NAME - aromatic-L-amino-acid decarboxylase activity SYNONYMS - DOPA decarboxylase // UNIQUE-ID - GO:0004586 TYPES - GO:0016831 COMMON-NAME - ornithine decarboxylase activity SYNONYMS - L-ornithine carboxy-lyase (putrescine-forming) SYNONYMS - L-ornithine carboxy-lyase activity SYNONYMS - SpeC // UNIQUE-ID - GO:0004590 TYPES - GO:0016831 COMMON-NAME - orotidine-5'-phosphate decarboxylase activity SYNONYMS - ODCase activity SYNONYMS - OMP decarboxylase activity SYNONYMS - OMP-DC SYNONYMS - OMPdcase activity SYNONYMS - orotate decarboxylase activity SYNONYMS - orotate monophosphate decarboxylase activity SYNONYMS - orotic decarboxylase activity SYNONYMS - orotidine 5'-phosphate decarboxylase activity SYNONYMS - orotidine monophosphate decarboxylase activity SYNONYMS - orotidine phosphate decarboxylase activity SYNONYMS - orotidine-5'-monophosphate decarboxylase activity SYNONYMS - orotidine-5'-phosphate carboxy-lyase (UMP-forming) SYNONYMS - orotidine-5'-phosphate carboxy-lyase activity SYNONYMS - orotidylic acid decarboxylase activity SYNONYMS - orotidylic decarboxylase activity SYNONYMS - orotodylate decarboxylase activity SYNONYMS - UMP synthase activity SYNONYMS - uridine 5'-monophosphate synthase activity // UNIQUE-ID - GO:0004611 TYPES - GO:0016831 COMMON-NAME - phosphoenolpyruvate carboxykinase activity SYNONYMS - PEP carboxykinase activity SYNONYMS - PEPCK activity SYNONYMS - phosphopyruvate carboxylase activity // UNIQUE-ID - GO:0004638 TYPES - GO:0016831 COMMON-NAME - phosphoribosylaminoimidazole carboxylase activity SYNONYMS - 1-(5-phosphoribosyl)-5-amino-4-imidazolecarboxylate carboxy-lyase activity SYNONYMS - 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate carboxy-lyase [5-amino-1-(5-phospho-D-ribosyl)imidazole-forming] SYNONYMS - 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate carboxy-lyase activity SYNONYMS - 5-amino-1-ribosylimidazole 5-phosphate carboxylase activity SYNONYMS - 5-phosphoribosyl-5-aminoimidazole carboxylase activity SYNONYMS - ADE2 SYNONYMS - AIR carboxylase activity SYNONYMS - class II PurE // UNIQUE-ID - GO:0004782 TYPES - GO:0016831 COMMON-NAME - sulfinoalanine decarboxylase activity SYNONYMS - 3-sulfino-L-alanine carboxy-lyase (hypotaurine-forming) SYNONYMS - 3-sulfino-L-alanine carboxy-lyase activity SYNONYMS - CADCase/CSADCase activity SYNONYMS - CSAD SYNONYMS - CSADCase activity SYNONYMS - cysteic decarboxylase activity SYNONYMS - cysteine-sulfinate decarboxylase activity SYNONYMS - cysteinesulfinate decarboxylase activity SYNONYMS - cysteinesulfinic acid decarboxylase activity SYNONYMS - L-cysteinesulfinic acid decarboxylase activity SYNONYMS - sulfoalanine decarboxylase activity SYNONYMS - sulphinoalanine decarboxylase activity // UNIQUE-ID - GO:0008488 TYPES - GO:0016831 COMMON-NAME - gamma-glutamyl carboxylase activity // UNIQUE-ID - GO:0008792 TYPES - GO:0016831 COMMON-NAME - arginine decarboxylase activity SYNONYMS - L-arginine carboxy-lyase (agmatine-forming) SYNONYMS - L-arginine carboxy-lyase activity SYNONYMS - SpeA // UNIQUE-ID - GO:0048040 TYPES - GO:0016831 COMMON-NAME - UDP-glucuronate decarboxylase activity SYNONYMS - UDP-D-glucuronate carboxy-lyase (UDP-D-xylose-forming) SYNONYMS - UDP-D-glucuronate carboxy-lyase activity SYNONYMS - UDP-glucuronic acid decarboxylase activity SYNONYMS - UDPglucuronate decarboxylase activity SYNONYMS - uridine-diphosphoglucuronate decarboxylase activity // UNIQUE-ID - GO:0050080 TYPES - GO:0016831 COMMON-NAME - malonyl-CoA decarboxylase activity SYNONYMS - malonyl coenzyme A decarboxylase activity SYNONYMS - malonyl-CoA carboxy-lyase (acetyl-CoA-forming) SYNONYMS - malonyl-CoA carboxy-lyase activity // UNIQUE-ID - GO:0004332 TYPES - GO:0016832 COMMON-NAME - fructose-bisphosphate aldolase activity SYNONYMS - 1,6-diphosphofructose aldolase activity SYNONYMS - aldolase activity SYNONYMS - D-fructose-1,6-bisphosphate D-glyceraldehyde-3-phosphate-lyase (glycerone-phosphate-forming) SYNONYMS - D-fructose-1,6-bisphosphate D-glyceraldehyde-3-phosphate-lyase activity SYNONYMS - diphosphofructose aldolase activity SYNONYMS - fructoaldolase activity SYNONYMS - fructose 1,6-diphosphate aldolase activity SYNONYMS - fructose 1-monophosphate aldolase activity SYNONYMS - fructose 1-phosphate aldolase activity SYNONYMS - fructose diphosphate aldolase activity SYNONYMS - fructose-1,6-bisphosphate triosephosphate-lyase activity SYNONYMS - ketose 1-phosphate aldolase activity SYNONYMS - phosphofructoaldolase activity SYNONYMS - SMALDO SYNONYMS - zymohexase activity // UNIQUE-ID - GO:0004419 TYPES - GO:0016833 COMMON-NAME - hydroxymethylglutaryl-CoA lyase activity SYNONYMS - (S)-3-hydroxy-3-methylglutaryl-CoA acetoacetate-lyase (acetyl-CoA-forming) SYNONYMS - (S)-3-hydroxy-3-methylglutaryl-CoA acetoacetate-lyase activity SYNONYMS - 3-hydroxy-3-methylglutarate-CoA lyase activity SYNONYMS - 3-hydroxy-3-methylglutaryl CoA cleaving enzyme SYNONYMS - 3-hydroxy-3-methylglutaryl coenzyme A lyase activity SYNONYMS - 3-hydroxy-3-methylglutaryl-CoA lyase activity SYNONYMS - HMG-CoA lyase activity SYNONYMS - hydroxymethylglutaryl coenzyme A lyase activity SYNONYMS - hydroxymethylglutaryl coenzyme A-cleaving enzyme // UNIQUE-ID - GO:0003994 TYPES - GO:0016836 COMMON-NAME - aconitate hydratase activity SYNONYMS - aconitase activity SYNONYMS - cis-aconitase activity SYNONYMS - citrate hydro-lyase activity SYNONYMS - citrate(isocitrate) hydro-lyase (cis-aconitate-forming) SYNONYMS - citrate(isocitrate) hydro-lyase activity // UNIQUE-ID - GO:0004300 TYPES - GO:0016836 COMMON-NAME - enoyl-CoA hydratase activity SYNONYMS - (3S)-3-hydroxyacyl-CoA hydro-lyase activity SYNONYMS - 2-enoyl-CoA hydratase activity SYNONYMS - 2-octenoyl coenzyme A hydrase activity SYNONYMS - acyl coenzyme A hydrase activity SYNONYMS - beta-hydroxyacid dehydrase activity SYNONYMS - beta-hydroxyacyl-CoA dehydrase activity SYNONYMS - crotonyl hydrase activity SYNONYMS - D-3-hydroxyacyl-CoA dehydratase SYNONYMS - ECH SYNONYMS - enol-CoA hydratase activity SYNONYMS - enoyl coenzyme A hydrase (D) SYNONYMS - enoyl coenzyme A hydrase (L) SYNONYMS - enoyl coenzyme A hydratase activity SYNONYMS - enoyl hydrase activity SYNONYMS - hydratase, enoyl coenzyme A SYNONYMS - short chain enoyl coenzyme A hydratase activity SYNONYMS - short-chain enoyl-CoA hydratase activity SYNONYMS - trans-2-enoyl-CoA hydratase activity SYNONYMS - unsaturated acyl-CoA hydratase activity // UNIQUE-ID - GO:0004333 TYPES - GO:0016836 COMMON-NAME - fumarate hydratase activity SYNONYMS - (S)-malate hydro-lyase (fumarate-forming) SYNONYMS - (S)-malate hydro-lyase activity SYNONYMS - fumarase activity SYNONYMS - L-malate hydro-lyase activity // UNIQUE-ID - GO:0004490 TYPES - GO:0016836 COMMON-NAME - methylglutaconyl-CoA hydratase activity SYNONYMS - (S)-3-hydroxy-3-methylglutaryl-CoA hydro-lyase (trans-3-methylglutaconyl-CoA-forming) SYNONYMS - (S)-3-hydroxy-3-methylglutaryl-CoA hydro-lyase activity SYNONYMS - 3-methylglutaconyl CoA hydratase activity SYNONYMS - methylglutaconase activity SYNONYMS - methylglutaconyl coenzyme A hydratase activity // UNIQUE-ID - GO:0004634 TYPES - GO:0016836 COMMON-NAME - phosphopyruvate hydratase activity SYNONYMS - 14-3-2-protein SYNONYMS - 2-phospho-D-glycerate hydro-lyase (phosphoenolpyruvate-forming) SYNONYMS - 2-phospho-D-glycerate hydro-lyase activity SYNONYMS - 2-phospho-D-glycerate-hydrolase activity SYNONYMS - 2-phosphoglycerate dehydratase activity SYNONYMS - 2-phosphoglycerate enolase activity SYNONYMS - 2-phosphoglyceric dehydratase activity SYNONYMS - enolase activity SYNONYMS - gamma-enolase activity SYNONYMS - nervous-system specific enolase SYNONYMS - phosphoenolpyruvate hydratase activity // UNIQUE-ID - GO:0004730 TYPES - GO:0016836 COMMON-NAME - pseudouridylate synthase activity COMMENT - Note that this term should not be confused with 'pseudouridine synthase activity ; GO:0009982', which refers to the intramolecular isomerization of uridine to pseudouridine. SYNONYMS - 5-ribosyluracil 5-phosphate synthetase activity SYNONYMS - pseudouridine monophosphate synthase activity SYNONYMS - pseudouridine monophosphate synthetase activity SYNONYMS - pseudouridylate synthetase activity SYNONYMS - pseudouridylic acid synthetase activity SYNONYMS - psiUMP synthetase activity SYNONYMS - uracil hydro-lyase (adding D-ribose 5-phosphate) SYNONYMS - uracil hydro-lyase (adding D-ribose 5-phosphate; pseudouridine-5'-phosphate-forming) SYNONYMS - uracil hydrolyase activity // UNIQUE-ID - GO:0008124 TYPES - GO:0016836 COMMON-NAME - 4-alpha-hydroxytetrahydrobiopterin dehydratase activity SYNONYMS - (6R)-6-(L-erythro-1,2-dihydroxypropyl)-5,6,7,8-tetrahydro-4a-hydroxypterin hydro-lyase [(6R)-6-(L-erythro-1,2-dihydroxypropyl)-7,8-dihydro-6H-pterin-forming] SYNONYMS - 4-alpha-hydroxy-tetrahydropterin dehydratase activity SYNONYMS - 4a-hydroxytetrahydrobiopterin dehydratase activity SYNONYMS - 4a-hydroxytetrahydrobiopterin hydro-lyase activity SYNONYMS - 4alpha-hydroxy-tetrahydropterin dehydratase activity SYNONYMS - pterin-4-alpha-carbinolamine dehydratase activity SYNONYMS - pterin-4a-carbinolamine dehydratase activity SYNONYMS - pterin-4alpha-carbinolamine dehydratase activity SYNONYMS - tetrahydrobiopterin dehydratase activity // UNIQUE-ID - GO:0008446 TYPES - GO:0016836 COMMON-NAME - GDP-mannose 4,6-dehydratase activity SYNONYMS - GDP-D-mannose 4,6-dehydratase activity SYNONYMS - GDP-D-mannose dehydratase activity SYNONYMS - GDP-mannose 4,6-hydro-lyase (GDP-4-dehydro-6-deoxy-D-mannose-forming) SYNONYMS - GDP-mannose 4,6-hydro-lyase activity SYNONYMS - GDPmannose 4,6-dehydratase activity SYNONYMS - Gmd SYNONYMS - guanosine 5'-diphosphate-D-mannose oxidoreductase activity SYNONYMS - guanosine diphosphomannose 4,6-dehydratase activity SYNONYMS - guanosine diphosphomannose oxidoreductase activity // UNIQUE-ID - GO:0008460 TYPES - GO:0016836 COMMON-NAME - dTDP-glucose 4,6-dehydratase activity SYNONYMS - dTDP-glucose 4,6-hydro-lyase (dTDP-4-dehydro-6-deoxy-D-glucose-forming) SYNONYMS - dTDP-glucose 4,6-hydro-lyase activity SYNONYMS - dTDPglucose 4,6-dehydratase activity SYNONYMS - dTDPglucose 4,6-hydro-lyase activity SYNONYMS - TDP-glucose oxidoreductase activity SYNONYMS - thymidine diphosphoglucose oxidoreductase activity // UNIQUE-ID - GO:0016508 TYPES - GO:0016836 COMMON-NAME - long-chain-enoyl-CoA hydratase activity SYNONYMS - long-chain enoyl coenzyme A hydratase activity SYNONYMS - long-chain-(3S)-3-hydroxyacyl-CoA hydro-lyase activity // UNIQUE-ID - GO:0019171 TYPES - GO:0016836 COMMON-NAME - 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity SYNONYMS - 3-hydroxyacyl-[acyl-carrier protein] dehydratase activity SYNONYMS - 3-hydroxyacyl-ACP dehydratase activity // UNIQUE-ID - GO:0003874 TYPES - GO:0016838 COMMON-NAME - 6-pyruvoyltetrahydropterin synthase activity // UNIQUE-ID - GO:0004795 TYPES - GO:0016838 COMMON-NAME - threonine synthase activity SYNONYMS - O-phospho-L-homoserine phospho-lyase (adding water) SYNONYMS - O-phospho-L-homoserine phospho-lyase (adding water; L-threonine-forming) SYNONYMS - threonine synthetase activity // UNIQUE-ID - GO:0003941 TYPES - GO:0016841 COMMON-NAME - L-serine ammonia-lyase activity COMMENT - Note that this function was formerly EC:4.3.1.13. SYNONYMS - L-hydroxyaminoacid dehydratase activity SYNONYMS - L-serine ammonia-lyase (pyruvate-forming) activity SYNONYMS - L-serine deaminase activity SYNONYMS - L-serine dehydratase activity SYNONYMS - L-serine hydro-lyase (deaminating) activity SYNONYMS - serine deaminase activity // UNIQUE-ID - GO:0004018 TYPES - GO:0016842 COMMON-NAME - N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity SYNONYMS - 6-N-(1,2-dicarboxyethyl)AMP AMP-lyase activity SYNONYMS - adenylosuccinase activity SYNONYMS - N6-(1,2-dicarboxyethyl)AMP AMP-lyase activity SYNONYMS - succino AMP-lyase activity // UNIQUE-ID - GO:0004056 TYPES - GO:0016842 COMMON-NAME - argininosuccinate lyase activity SYNONYMS - 2-(Nomega-L-arginino)succinate arginine-lyase (fumarate-forming) SYNONYMS - 2-(omega-N-L-arginino)succinate arginine-lyase (fumarate-forming) SYNONYMS - arginine-succinate lyase activity SYNONYMS - argininosuccinic acid lyase activity SYNONYMS - arginosuccinase activity SYNONYMS - N-(L-argininosuccinate) arginine-lyase activity SYNONYMS - omega-N-(L-arginino)succinate arginine-lyase activity // UNIQUE-ID - GO:0004598 TYPES - GO:0016842 COMMON-NAME - peptidylamidoglycolate lyase activity SYNONYMS - alpha-hydroxyglycine amidating dealkylase activity SYNONYMS - HGAD SYNONYMS - PAL SYNONYMS - peptidyl-alpha-hydroxyglycine alpha-amidating lyase activity SYNONYMS - peptidylamidoglycolate peptidylamide-lyase (glyoxylate-forming) SYNONYMS - peptidylamidoglycolate peptidylamide-lyase activity SYNONYMS - PGL // UNIQUE-ID - GO:0018114 TYPES - GO:0016855 COMMON-NAME - threonine racemase activity // UNIQUE-ID - GO:0030378 TYPES - GO:0016855 COMMON-NAME - serine racemase activity // UNIQUE-ID - GO:0003978 TYPES - GO:0016857 COMMON-NAME - UDP-glucose 4-epimerase activity SYNONYMS - 4-epimerase activity SYNONYMS - galactowaldenase activity SYNONYMS - UDP-D-galactose 4-epimerase activity SYNONYMS - UDP-galactose 4-epimerase activity SYNONYMS - UDP-glucose epimerase activity SYNONYMS - UDPG-4-epimerase activity SYNONYMS - UDPgalactose 4-epimerase activity SYNONYMS - UDPglucose 4-epimerase activity SYNONYMS - uridine diphosphate galactose 4-epimerase activity SYNONYMS - uridine diphosphate glucose 4-epimerase activity SYNONYMS - uridine diphospho-galactose-4-epimerase activity SYNONYMS - uridine diphosphoglucose 4-epimerase activity SYNONYMS - uridine diphosphoglucose epimerase activity // UNIQUE-ID - GO:0004750 TYPES - GO:0016857 COMMON-NAME - ribulose-phosphate 3-epimerase activity SYNONYMS - D-ribulose 5-phosphate epimerase activity SYNONYMS - D-ribulose phosphate-3-epimerase activity SYNONYMS - D-ribulose-5-P 3-epimerase activity SYNONYMS - D-ribulose-5-phosphate 3-epimerase activity SYNONYMS - D-ribulose-5-phosphate epimerase activity SYNONYMS - D-xylulose-5-phosphate 3-epimerase activity SYNONYMS - erythrose-4-phosphate epimerase activity SYNONYMS - erythrose-4-phosphate isomerase activity SYNONYMS - pentose-5-phosphate 3-epimerase activity SYNONYMS - phosphoketopentose 3-epimerase activity SYNONYMS - phosphoketopentose epimerase activity SYNONYMS - phosphoribulose epimerase activity SYNONYMS - ribulose 5-phosphate 3-epimerase activity SYNONYMS - xylulose phosphate 3-epimerase activity // UNIQUE-ID - GO:0008761 TYPES - GO:0016857 COMMON-NAME - UDP-N-acetylglucosamine 2-epimerase activity SYNONYMS - UDP-GlcNAc-2-epimerase activity SYNONYMS - UDP-N-acetyl-D-glucosamine 2-epimerase activity SYNONYMS - UDP-N-acetylglucosamine 2'-epimerase activity SYNONYMS - uridine diphosphate-N-acetylglucosamine-2'-epimerase activity SYNONYMS - uridine diphospho-N-acetylglucosamine 2'-epimerase activity SYNONYMS - uridine diphosphoacetylglucosamine 2'-epimerase activity // UNIQUE-ID - GO:0050121 TYPES - GO:0016857 COMMON-NAME - N-acylglucosamine 2-epimerase activity SYNONYMS - acylglucosamine 2-epimerase activity SYNONYMS - GlcNAc 2-epimerase activity SYNONYMS - N-acetyl-D-glucosamine 2-epimerase activity SYNONYMS - N-acetylglucosamine 2-epimerase activity SYNONYMS - N-acyl-D-glucosamine 2-epimerase activity // UNIQUE-ID - GO:0050178 TYPES - GO:0016862 COMMON-NAME - phenylpyruvate tautomerase activity SYNONYMS - phenylpyruvate keto--enol tautomerase activity SYNONYMS - phenylpyruvate keto-enol-isomerase activity SYNONYMS - phenylpyruvic keto--enol isomerase activity // UNIQUE-ID - GO:0004165 TYPES - GO:0016863 COMMON-NAME - dodecenoyl-CoA delta-isomerase activity SYNONYMS - 3,2-trans-enoyl-CoA isomerase activity SYNONYMS - acetylene-allene isomerase activity SYNONYMS - delta(3),Delta(2)-enoyl-CoA isomerase activity SYNONYMS - delta(3)-cis-Delta(2)-trans-enoyl-CoA isomerase activity SYNONYMS - delta3,Delta2-enoyl-CoA isomerase activity SYNONYMS - delta3-cis-delta2-trans-enoyl-CoA isomerase SYNONYMS - dodecenoyl-CoA (3Z)-(2E)-isomerase activity SYNONYMS - dodecenoyl-CoA D-isomerase activity SYNONYMS - dodecenoyl-CoA Delta-isomerase activity SYNONYMS - dodecenoyl-CoA delta3-cis-delta2-trans-isomerase activity SYNONYMS - dodecenoyl-CoA isomerase activity // UNIQUE-ID - GO:0004452 TYPES - GO:0016863 COMMON-NAME - isopentenyl-diphosphate delta-isomerase activity SYNONYMS - IPP isomerase activity SYNONYMS - ipp isomerase activity SYNONYMS - isopentenyl-diphosphate D-isomerase activity SYNONYMS - isopentenyl-diphosphate delta3-delta2-isomerase activity SYNONYMS - isopentenylpyrophosphate delta-isomerase activity SYNONYMS - isopentenylpyrophosphate Delta-isomerase activity SYNONYMS - isopentenylpyrophosphate isomerase activity SYNONYMS - methylbutenylpyrophosphate isomerase activity // UNIQUE-ID - GO:0004769 TYPES - GO:0016863 COMMON-NAME - steroid delta-isomerase activity SYNONYMS - steroid D-isomerase activity // UNIQUE-ID - GO:0047750 TYPES - GO:0016863 COMMON-NAME - cholestenol delta-isomerase activity SYNONYMS - cholestenol D-isomerase activity SYNONYMS - delta7-cholestenol delta7-delta8-isomerase activity // UNIQUE-ID - GO:0016439 TYPES - GO:0009982 COMMON-NAME - tRNA-pseudouridine synthase activity COMMENT - Note that this term should not be confused with 'pseudouridylate synthase activity ; GO:0004730', which refers to the formation of free pseudouridine from uracil and ribose-5-phosphate. SYNONYMS - transfer ribonucleate pseudouridine synthetase activity SYNONYMS - transfer RNA pseudouridine synthetase activity SYNONYMS - tRNA pseudouridylate synthase I activity SYNONYMS - tRNA-pseudouridine synthase I activity SYNONYMS - tRNA-uridine isomerase activity SYNONYMS - tRNA-uridine uracilmutase activity // UNIQUE-ID - GO:0004082 TYPES - GO:0016868 COMMON-NAME - bisphosphoglycerate mutase activity SYNONYMS - 2,3-bisphosphoglycerate mutase activity SYNONYMS - 2,3-bisphosphoglycerate synthase activity SYNONYMS - 2,3-diphosphoglycerate mutase activity SYNONYMS - 2,3-diphosphoglycerate synthase activity SYNONYMS - 2,3-diphosphoglyceromutase activity SYNONYMS - 3-phospho-D-glycerate 1,2-phosphomutase activity SYNONYMS - biphosphoglycerate synthase activity SYNONYMS - bisphosphoglycerate synthase activity SYNONYMS - bisphosphoglyceromutase SYNONYMS - BPGM activity SYNONYMS - diphosphoglycerate mutase activity SYNONYMS - diphosphoglyceric mutase activity SYNONYMS - diphosphoglyceromutase activity SYNONYMS - DPGM SYNONYMS - glycerate phosphomutase activity // UNIQUE-ID - GO:0004610 TYPES - GO:0016868 COMMON-NAME - phosphoacetylglucosamine mutase activity SYNONYMS - acetylaminodeoxyglucose phosphomutase activity SYNONYMS - acetylglucosamine phosphomutase activity SYNONYMS - N-acetyl-alpha-D-glucosamine 1,6-phosphomutase activity SYNONYMS - N-acetyl-D-glucosamine 1,6-phosphomutase activity SYNONYMS - N-acetylglucosamine-phosphate mutase activity SYNONYMS - phospho-N-acetylglucosamine mutase activity // UNIQUE-ID - GO:0004614 TYPES - GO:0016868 COMMON-NAME - phosphoglucomutase activity SYNONYMS - alpha-D-glucose 1,6-phosphomutase activity SYNONYMS - glucose phosphomutase activity SYNONYMS - phosphoglucose mutase activity // UNIQUE-ID - GO:0004615 TYPES - GO:0016868 COMMON-NAME - phosphomannomutase activity SYNONYMS - alpha-D-mannose 1,6-phosphomutase activity SYNONYMS - D-mannose 1,6-phosphomutase activity SYNONYMS - mannose phosphomutase activity SYNONYMS - phosphomannose mutase activity // UNIQUE-ID - GO:0004619 TYPES - GO:0016868 COMMON-NAME - phosphoglycerate mutase activity SYNONYMS - bisphosphoglyceromutase SYNONYMS - D-phosphoglycerate 2,3-phosphomutase activity SYNONYMS - diphosphoglycomutase SYNONYMS - GriP mutase SYNONYMS - monophosphoglycerate mutase activity SYNONYMS - monophosphoglyceromutase activity SYNONYMS - MPGM SYNONYMS - PGA mutase activity SYNONYMS - PGAM activity SYNONYMS - PGM SYNONYMS - phosphoglycerate phosphomutase activity SYNONYMS - phosphoglyceromutase activity // UNIQUE-ID - GO:0000250 TYPES - GO:0031559 COMMON-NAME - lanosterol synthase activity SYNONYMS - 2,3-epoxysqualene-lanosterol cyclase SYNONYMS - OSC SYNONYMS - oxidosqualene-lanosterol cyclase // UNIQUE-ID - GO:0004812 TYPES - GO:0016876 COMMON-NAME - aminoacyl-tRNA ligase activity COMMENT - Note that the bond resulting from this reaction is a carboxylic acid ester bond, linking the alpha carboxyl group of the amino acid to either the 2' or 3' hydroxyl of the 3'- terminal adenyl residue of the tRNA. SYNONYMS - aminoacyl-tRNA synthetase activity // UNIQUE-ID - GO:0004467 TYPES - GO:0015645 COMMON-NAME - long-chain-fatty-acid-CoA ligase activity SYNONYMS - ACS3 SYNONYMS - acyl-activating enzyme activity SYNONYMS - acyl-CoA synthetase activity SYNONYMS - arachidonyl-CoA synthetase SYNONYMS - FAA1 SYNONYMS - fatty acid thiokinase (long chain) activity SYNONYMS - fatty acid thiokinase (long-chain) activity SYNONYMS - LCFA synthetase activity SYNONYMS - lignoceroyl-CoA synthase activity SYNONYMS - long chain fatty acyl-CoA synthetase activity SYNONYMS - long-chain acyl CoA synthetase activity SYNONYMS - long-chain acyl-CoA synthetase activity SYNONYMS - long-chain acyl-CoA synthetase I SYNONYMS - long-chain acyl-CoA synthetase II SYNONYMS - long-chain acyl-coenzyme A synthetase activity SYNONYMS - long-chain fatty acid activation SYNONYMS - long-chain fatty acid-CoA ligase activity SYNONYMS - long-chain fatty acyl coenzyme A synthetase activity SYNONYMS - long-chain-fatty-acyl-CoA synthetase activity SYNONYMS - oleoyl-CoA synthetase SYNONYMS - palmitoyl coenzyme A synthetase SYNONYMS - palmitoyl-CoA ligase SYNONYMS - palmitoyl-CoA synthase SYNONYMS - pristanoyl-CoA synthetase SYNONYMS - stearoyl-CoA synthetase SYNONYMS - thiokinase // UNIQUE-ID - GO:0003987 TYPES - GO:0016405 TYPES - GO:0016878 COMMON-NAME - acetate-CoA ligase activity SYNONYMS - acetate to acetyl-CoA SYNONYMS - acetyl-CoA synthetase // UNIQUE-ID - GO:0003996 TYPES - GO:0016405 TYPES - GO:0016878 COMMON-NAME - acyl-CoA ligase activity // UNIQUE-ID - GO:0004774 TYPES - GO:0016405 TYPES - GO:0016878 COMMON-NAME - succinate-CoA ligase activity // UNIQUE-ID - GO:0030729 TYPES - GO:0016878 COMMON-NAME - acetoacetate-CoA ligase activity SYNONYMS - acetoacetate:CoA ligase (AMP-forming) SYNONYMS - acetoacetyl-CoA synthetase activity // UNIQUE-ID - GO:0047747 TYPES - GO:0016878 COMMON-NAME - cholate-CoA ligase activity SYNONYMS - 3-alpha,7-alpha,12-alpha-trihydroxy-5-beta-cholestanate--CoA ligase activity SYNONYMS - 3-alpha,7-alpha,12-alpha-trihydroxy-5-beta-cholestanate-CoA ligase activity SYNONYMS - 3-alpha,7-alpha,12-alpha-trihydroxy-5-beta-cholestanate:CoA ligase (AMP-forming) activity SYNONYMS - 3-alpha,7-alpha,12-alpha-trihydroxy-5-beta-cholestanoate-CoA ligase activity SYNONYMS - 3-alpha,7-alpha,12-alpha-trihydroxy-5-beta-cholestanoate-CoA synthetase activity SYNONYMS - 3-alpha,7-alpha,12-alpha-trihydroxy-5-beta-cholestanoyl coenzyme A synthetase activity SYNONYMS - 3alpha,7alpha,12alpha-trihydroxy-5beta-cholestanate-CoA ligase activity SYNONYMS - 3alpha,7alpha,12alpha-trihydroxy-5beta-cholestanate:CoA ligase (AMP-forming) SYNONYMS - 3alpha,7alpha,12alpha-trihydroxy-5beta-cholestanoate-CoA ligase activity SYNONYMS - 3alpha,7alpha,12alpha-trihydroxy-5beta-cholestanoate-CoA synthetase activity SYNONYMS - 3alpha,7alpha,12alpha-trihydroxy-5beta-cholestanoyl coenzyme A synthetase activity SYNONYMS - BAL activity SYNONYMS - bile acid CoA ligase activity SYNONYMS - bile acid coenzyme A ligase activity SYNONYMS - cholate thiokinase activity SYNONYMS - cholate:CoA ligase (AMP-forming) SYNONYMS - cholic acid:CoA ligase activity SYNONYMS - cholic thiokinase activity SYNONYMS - choloyl coenzyme A synthetase activity SYNONYMS - choloyl-CoA synthetase activity SYNONYMS - cholyl-CoA synthetase activity SYNONYMS - THCA-CoA ligase activity SYNONYMS - trihydroxycoprostanoyl-CoA synthetase activity // UNIQUE-ID - GO:0047760 TYPES - GO:0016878 COMMON-NAME - butyrate-CoA ligase activity SYNONYMS - acyl-activating enzyme activity SYNONYMS - butanoate:CoA ligase (AMP-forming) SYNONYMS - butyryl-CoA synthetase activity SYNONYMS - butyryl-coenzyme A synthetase activity SYNONYMS - fatty acid activating enzyme SYNONYMS - fatty acid thiokinase (medium chain) activity SYNONYMS - fatty acyl coenzyme A synthetase activity SYNONYMS - L-(+)-3-hydroxybutyryl CoA ligase activity SYNONYMS - medium chain acyl-CoA synthetase activity SYNONYMS - short-chain acyl-CoA synthetase activity // UNIQUE-ID - GO:0004087 TYPES - GO:0004086 COMMON-NAME - carbamoyl-phosphate synthase (ammonia) activity SYNONYMS - carbamoyl phosphate synthase (ammonia) activity SYNONYMS - carbamoyl-phosphate synthetase (ammonia) activity SYNONYMS - carbamoyl-phosphate synthetase I activity SYNONYMS - carbamoylphosphate synthase (ammonia) SYNONYMS - carbamoylphosphate synthase activity SYNONYMS - carbamoylphosphate synthetase (ammonia) activity SYNONYMS - carbamylphosphate synthetase activity SYNONYMS - carbamylphosphate synthetase I SYNONYMS - carbmoylphosphate synthetase activity SYNONYMS - carbon-dioxide--ammonia ligase activity SYNONYMS - carbon-dioxide:ammonia ligase (ADP-forming, carbamate-phosphorylating) SYNONYMS - CPS I activity // UNIQUE-ID - GO:0008795 TYPES - GO:0016880 COMMON-NAME - NAD+ synthase activity SYNONYMS - deamido-NAD+:ammonia ligase (AMP-forming) SYNONYMS - diphosphopyridine nucleotide synthetase activity SYNONYMS - NAD synthase (AMP-forming) SYNONYMS - NAD synthase activity SYNONYMS - NAD synthetase activity SYNONYMS - NAD(+) synthetase activity SYNONYMS - NAD+ synthetase activity SYNONYMS - nicotinamide adenine dinucleotide synthetase activity // UNIQUE-ID - GO:0016211 TYPES - GO:0016880 COMMON-NAME - ammonia ligase activity // UNIQUE-ID - GO:0004326 TYPES - GO:0016881 COMMON-NAME - tetrahydrofolylpolyglutamate synthase activity SYNONYMS - folate polyglutamate synthetase activity SYNONYMS - folylpoly(gamma-glutamate) synthase activity SYNONYMS - folylpoly-gamma-glutamate synthase activity SYNONYMS - folylpoly-gamma-glutamate synthetase-dihydrofolate synthetase activity SYNONYMS - folylpolyglutamate synthase activity SYNONYMS - folylpolyglutamate synthetase activity SYNONYMS - folylpolyglutamyl synthetase activity SYNONYMS - formyltetrahydropteroyldiglutamate synthetase activity SYNONYMS - FPGS activity SYNONYMS - N(10)-formyltetrahydropteroyldiglutamate synthetase activity SYNONYMS - N10-formyltetrahydropteroyldiglutamate synthetase activity SYNONYMS - tetrahydrofolate synthase activity SYNONYMS - tetrahydrofolate:L-glutamate gamma-ligase (ADP-forming) activity SYNONYMS - tetrahydrofolyl-[gamma-Glu]n:L-glutamate gamma-ligase (ADP-forming) SYNONYMS - tetrahydropteroyl-[gamma-polyglutamate]:L-glutamate gamma-ligase (ADP-forming) // UNIQUE-ID - GO:0004357 TYPES - GO:0016881 COMMON-NAME - glutamate-cysteine ligase activity SYNONYMS - gamma-glutamyl-L-cysteine synthetase activity SYNONYMS - gamma-glutamylcysteine synthetase activity SYNONYMS - gamma-glutamylcysteinyl synthetase activity SYNONYMS - L-glutamate:L-cysteine gamma-ligase (ADP-forming) activity // UNIQUE-ID - GO:0004363 TYPES - GO:0016881 COMMON-NAME - glutathione synthase activity SYNONYMS - gamma-L-glutamyl-L-cysteine:glycine ligase (ADP-forming) SYNONYMS - glutathione synthetase activity SYNONYMS - GSH synthetase activity // UNIQUE-ID - GO:0004639 TYPES - GO:0016881 COMMON-NAME - phosphoribosylaminoimidazolesuccinocarboxamide synthase activity SYNONYMS - 4-((N-succinylamino)carbonyl)-5-aminoimidazole ribonucleotide synthetase activity SYNONYMS - 4-(N-succinocarboxamide)-5-aminoimidazole synthetase activity SYNONYMS - 4-[(N-succinylamino)carbonyl]-5-aminoimidazole ribonucleotide synthetase activity SYNONYMS - 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate:L-aspartate ligase (ADP-forming) SYNONYMS - 5-aminoimidazole-4-N-succinocarboxamide ribonucleotide synthetase activity SYNONYMS - phosphoribosylaminoimidazole-succinocarboxamide synthase activity SYNONYMS - phosphoribosylaminoimidazole-succinocarboxamide synthetase activity SYNONYMS - phosphoribosylaminoimidazolesuccinocarboxamide synthetase activity SYNONYMS - PurC SYNONYMS - SAICAR synthase activity SYNONYMS - SAICAR synthetase activity SYNONYMS - SAICARs activity // UNIQUE-ID - GO:0004835 TYPES - GO:0016881 COMMON-NAME - tubulin-tyrosine ligase activity SYNONYMS - alpha-tubulin:L-tyrosine ligase (ADP-forming) SYNONYMS - TTL activity SYNONYMS - tubulinyl-tyrosine ligase activity // UNIQUE-ID - GO:0019787 TYPES - GO:0016881 COMMON-NAME - small conjugating protein ligase activity SYNONYMS - ubiquitin-like-protein ligase activity // UNIQUE-ID - GO:0004641 TYPES - GO:0016882 COMMON-NAME - phosphoribosylformylglycinamidine cyclo-ligase activity SYNONYMS - 2-(formamido)-1-N-(5-phosphoribosyl)acetamidine cyclo-ligase (ADP-forming) SYNONYMS - 2-(formamido)-N1-(5-phosphoribosyl)acetamidine cyclo-ligase (ADP-forming) SYNONYMS - 5'-aminoimidazole ribonucleotide synthetase activity SYNONYMS - AIR synthase activity SYNONYMS - AIR synthetase activity SYNONYMS - AIRS activity SYNONYMS - phosphoribosyl-aminoimidazole synthetase activity SYNONYMS - phosphoribosylaminoimidazole synthetase activity // UNIQUE-ID - GO:0003922 TYPES - GO:0016884 COMMON-NAME - GMP synthase (glutamine-hydrolyzing) activity SYNONYMS - glutamine amidotransferase activity SYNONYMS - GMP synthase (glutamine-hydrolysing) SYNONYMS - GMP synthetase (glutamine-hydrolysing) SYNONYMS - GMP synthetase (glutamine-hydrolyzing) activity SYNONYMS - guanosine 5'-monophosphate synthetase activity SYNONYMS - guanosine monophosphate synthetase (glutamine-hydrolyzing) SYNONYMS - guanylate synthetase (glutamine-hydrolyzing) SYNONYMS - xanthosine 5'-phosphate amidotransferase activity SYNONYMS - xanthosine-5'-phosphate:L-glutamine amido-ligase (AMP-forming) // UNIQUE-ID - GO:0003952 TYPES - GO:0016884 COMMON-NAME - NAD+ synthase (glutamine-hydrolyzing) activity SYNONYMS - deamido-NAD+:L-glutamine amido-ligase (AMP-forming) SYNONYMS - desamidonicotinamide adenine dinucleotide amidotransferase activity SYNONYMS - DPN synthetase activity SYNONYMS - NAD synthase (glutamine-hydrolyzing) activity SYNONYMS - NAD synthetase (glutamine-hydrolysing) SYNONYMS - NAD(+) synthetase (glutamine-hydrolyzing) activity SYNONYMS - NAD+ synthase (glutamine-hydrolysing) SYNONYMS - NAD+ synthetase (glutamine-hydrolyzing) SYNONYMS - nicotinamide adenine dinucleotide synthetase (glutamine) activity // UNIQUE-ID - GO:0004077 TYPES - GO:0018271 COMMON-NAME - biotin-[acetyl-CoA-carboxylase] ligase activity SYNONYMS - acetyl CoA holocarboxylase synthetase activity SYNONYMS - acetyl coenzyme A holocarboxylase synthetase activity SYNONYMS - acetyl-CoA carboxylase biotin holoenzyme synthetase activity SYNONYMS - biotin holoenzyme synthetase activity SYNONYMS - biotin--[acetyl-CoA carboxylase] synthetase activity SYNONYMS - biotin--protein ligase activity SYNONYMS - biotin-acetyl coenzyme A carboxylase synthetase activity SYNONYMS - biotin-acetyl-CoA carboxylase synthetase SYNONYMS - biotin-acetyl-CoA-carboxylase ligase activity SYNONYMS - biotin:apo-acetyl-CoA:carbon-dioxide ligase (ADP-forming) ligase (AMP-forming) SYNONYMS - biotin:apocarboxylase ligase activity SYNONYMS - HCS // UNIQUE-ID - GO:0004078 TYPES - GO:0018271 COMMON-NAME - biotin-[methylcrotonoyl-CoA-carboxylase] ligase activity SYNONYMS - beta-methylcrotonyl coenzyme A holocarboxylase synthetase activity SYNONYMS - biotin--[methylcrotonoyl-CoA-carboxylase] synthetase activity SYNONYMS - biotin-beta-methylcrotonyl coenzyme A carboxylase synthetase activity SYNONYMS - biotin-methylcrotonoyl-CoA-carboxylase ligase activity SYNONYMS - biotin-methylcrotonoyl-CoA-carboxylase synthetase SYNONYMS - biotin:apo-3-methylcrotonoyl-CoA:carbon-dioxide ligase (ADP-forming) ligase (AMP-forming) SYNONYMS - holocarboxylase-synthetase activity // UNIQUE-ID - GO:0004079 TYPES - GO:0018271 COMMON-NAME - biotin-[methylmalonyl-CoA-carboxytransferase] ligase activity SYNONYMS - biotin--[methylmalonyl-CoA-carboxyltransferase] ligase activity SYNONYMS - biotin--[methylmalonyl-CoA-carboxyltransferase] synthetase activity SYNONYMS - biotin--[methylmalonyl-CoA-carboxytransferase] synthetase activity SYNONYMS - biotin-[methylmalonyl-CoA-carboxyltransferase] ligase activity SYNONYMS - biotin-methylmalonyl coenzyme A carboxyltransferase synthetase activity SYNONYMS - biotin-methylmalonyl-CoA-carboxyltransferase ligase activity SYNONYMS - biotin-methylmalonyl-CoA-carboxyltransferase synthetase SYNONYMS - biotin-methylmalonyl-CoA-carboxytransferase ligase activity SYNONYMS - biotin-methylmalonyl-CoA-carboxytransferase synthetase activity SYNONYMS - biotin-transcarboxylase synthetase activity SYNONYMS - biotin:apomethylmalonyl-CoA:pyruvate carboxyltransferase ligase (AMP-forming) SYNONYMS - biotin:apomethylmalonyl-CoA:pyruvate carboxytransferase ligase (AMP-forming) SYNONYMS - methylmalonyl coenzyme A holotranscarboxylase synthetase activity // UNIQUE-ID - GO:0004080 TYPES - GO:0018271 COMMON-NAME - biotin-[propionyl-CoA-carboxylase (ATP-hydrolyzing)] ligase activity SYNONYMS - biotin-[propionyl-CoA-carboxylase (ATP-hydrolyzing)] synthetase activity SYNONYMS - biotin-propionyl coenzyme A carboxylase synthetase activity SYNONYMS - biotin-propionyl-CoA-carboxylase (ATP-hydrolysing) ligase activity SYNONYMS - biotin-propionyl-CoA-carboxylase (ATP-hydrolysing) synthetase activity SYNONYMS - biotin:apo-propanoyl-CoA:carbon-dioxide ligase (ADP-forming) ligase (AMP-forming) SYNONYMS - holocarboxylase synthetase activity SYNONYMS - propionyl coenzyme A holocarboxylase synthetase activity SYNONYMS - propionyl-CoA holocarboxylase synthetase activity // UNIQUE-ID - GO:0003989 TYPES - GO:0016421 COMMON-NAME - acetyl-CoA carboxylase activity SYNONYMS - acetyl coenzyme A carboxylase activity SYNONYMS - acetyl-CoA:carbon-dioxide ligase (ADP-forming) // UNIQUE-ID - GO:0004485 TYPES - GO:0016421 COMMON-NAME - methylcrotonoyl-CoA carboxylase activity SYNONYMS - 3-methylcrotonoyl-CoA:carbon-dioxide ligase (ADP-forming) SYNONYMS - beta-methylcrotonyl CoA carboxylase activity SYNONYMS - beta-methylcrotonyl coenzyme A carboxylase activity SYNONYMS - beta-methylcrotonyl-CoA carboxylase activity SYNONYMS - methylcrotonyl coenzyme A carboxylase activity SYNONYMS - methylcrotonyl-CoA carboxylase activity // UNIQUE-ID - GO:0004658 TYPES - GO:0016421 COMMON-NAME - propionyl-CoA carboxylase activity SYNONYMS - PCCase activity SYNONYMS - propanoyl-CoA:carbon-dioxide ligase (ADP-forming) SYNONYMS - propionyl coenzyme A carboxylase activity // UNIQUE-ID - GO:0003910 TYPES - GO:0003909 COMMON-NAME - DNA ligase (ATP) activity SYNONYMS - deoxyribonucleate ligase SYNONYMS - deoxyribonucleic acid joinase SYNONYMS - deoxyribonucleic acid ligase SYNONYMS - deoxyribonucleic acid repair enzyme SYNONYMS - deoxyribonucleic acid-joining enzyme SYNONYMS - deoxyribonucleic joinase SYNONYMS - deoxyribonucleic ligase SYNONYMS - deoxyribonucleic repair enzyme SYNONYMS - deoxyribonucleic-joining enzyme SYNONYMS - DNA joinase activity SYNONYMS - DNA repair enzyme activity SYNONYMS - DNA-joining enzyme SYNONYMS - poly(deoxyribonucleotide):poly(deoxyribonucleotide) ligase (AMP-forming) SYNONYMS - polydeoxyribonucleotide synthase (ATP) activity SYNONYMS - polynucleotide ligase SYNONYMS - polynucleotide ligase (ATP) activity SYNONYMS - sealase activity // UNIQUE-ID - GO:0022829 TYPES - GO:0015267 COMMON-NAME - wide pore channel activity SYNONYMS - gap junction activity SYNONYMS - non-gated, wide pore channel activity // UNIQUE-ID - GO:0022836 TYPES - GO:0015267 COMMON-NAME - gated channel activity // UNIQUE-ID - GO:0022838 TYPES - GO:0015267 COMMON-NAME - substrate specific channel activity // UNIQUE-ID - GO:0005216 TYPES - GO:0015075 TYPES - GO:0022838 COMMON-NAME - ion channel activity // UNIQUE-ID - GO:0005368 TYPES - GO:0005275 TYPES - GO:0008028 COMMON-NAME - taurine transmembrane transporter activity // UNIQUE-ID - GO:0005416 TYPES - GO:0005275 TYPES - GO:0015294 COMMON-NAME - cation:amino acid symporter activity SYNONYMS - cation/amino acid symporter // UNIQUE-ID - GO:0008504 TYPES - GO:0005275 COMMON-NAME - monoamine transmembrane transporter activity // UNIQUE-ID - GO:0015193 TYPES - GO:0005275 TYPES - GO:0015175 TYPES - GO:0015179 COMMON-NAME - L-proline transmembrane transporter activity SYNONYMS - glycine betaine/proline porter activity SYNONYMS - L-proline permease activity SYNONYMS - L-proline transporter activity SYNONYMS - proline/glycine/betaine:hydrogen/sodium symporter activity // UNIQUE-ID - GO:0015220 TYPES - GO:0005275 COMMON-NAME - choline transmembrane transporter activity SYNONYMS - amino acid/choline transmembrane transporter activity SYNONYMS - choline permease activity // UNIQUE-ID - GO:0015326 TYPES - GO:0005275 TYPES - GO:0008324 COMMON-NAME - cationic amino acid transmembrane transporter activity // UNIQUE-ID - GO:0005315 TYPES - GO:0015114 TYPES - GO:0015291 COMMON-NAME - inorganic phosphate transmembrane transporter activity // UNIQUE-ID - GO:0008271 TYPES - GO:0015116 TYPES - GO:0015291 COMMON-NAME - secondary active sulfate transmembrane transporter activity SYNONYMS - secondary active sulphate transmembrane transporter activity SYNONYMS - sulfate porter activity SYNONYMS - sulphate porter activity // UNIQUE-ID - GO:0008490 TYPES - GO:0015105 TYPES - GO:0015291 COMMON-NAME - arsenite secondary active transmembrane transporter activity SYNONYMS - arsenite porter activity // UNIQUE-ID - GO:0008518 TYPES - GO:0015291 COMMON-NAME - reduced folate carrier activity SYNONYMS - reduced folate transporter // UNIQUE-ID - GO:0015292 TYPES - GO:0015291 COMMON-NAME - uniporter activity SYNONYMS - facilitated diffusion carrier SYNONYMS - single-species transporter SYNONYMS - uniport // UNIQUE-ID - GO:0015293 TYPES - GO:0015291 COMMON-NAME - symporter activity SYNONYMS - cotransporter SYNONYMS - porter SYNONYMS - symport // UNIQUE-ID - GO:0015297 TYPES - GO:0015291 COMMON-NAME - antiporter activity SYNONYMS - antiport SYNONYMS - countertransporter SYNONYMS - dicarboxylate (succinate/fumarate/malate) antiporter activity SYNONYMS - exchange transporter SYNONYMS - exchanger SYNONYMS - porter // UNIQUE-ID - GO:0015322 TYPES - GO:0015198 TYPES - GO:0015291 COMMON-NAME - secondary active oligopeptide transmembrane transporter activity SYNONYMS - oligopeptide porter activity // UNIQUE-ID - GO:0015355 TYPES - GO:0008028 TYPES - GO:0015291 COMMON-NAME - secondary active monocarboxylate transmembrane transporter activity SYNONYMS - monocarboxylate porter activity // UNIQUE-ID - GO:0005343 TYPES - GO:0005342 TYPES - GO:0015370 COMMON-NAME - organic acid:sodium symporter activity SYNONYMS - sodium/chloride-dependent organic acid cotransporter SYNONYMS - sodium:dicarboxylate/tricarboxylate symporter activity // UNIQUE-ID - GO:0015405 TYPES - GO:0015399 COMMON-NAME - P-P-bond-hydrolysis-driven transmembrane transporter activity SYNONYMS - P-P-bond-hydrolysis-driven transporters // UNIQUE-ID - GO:0015453 TYPES - GO:0015399 COMMON-NAME - oxidoreduction-driven active transmembrane transporter activity // UNIQUE-ID - GO:0046943 TYPES - GO:0005342 COMMON-NAME - carboxylic acid transmembrane transporter activity // UNIQUE-ID - GO:0015136 TYPES - GO:0008028 TYPES - GO:0015144 COMMON-NAME - sialic acid transmembrane transporter activity // UNIQUE-ID - GO:0008324 TYPES - GO:0015075 COMMON-NAME - cation transmembrane transporter activity SYNONYMS - transmembrane cation transporter activity // UNIQUE-ID - GO:0008509 TYPES - GO:0015075 COMMON-NAME - anion transmembrane transporter activity SYNONYMS - anion transporter activity // UNIQUE-ID - GO:0005338 TYPES - GO:0015144 COMMON-NAME - nucleotide-sugar transmembrane transporter activity // UNIQUE-ID - GO:0051119 TYPES - GO:0015144 COMMON-NAME - sugar transmembrane transporter activity SYNONYMS - sugar/polyol channel activity // UNIQUE-ID - GO:0005337 TYPES - GO:0015932 COMMON-NAME - nucleoside transmembrane transporter activity SYNONYMS - intracellular nucleoside transmembrane transporter activity // UNIQUE-ID - GO:0015205 TYPES - GO:0015932 COMMON-NAME - nucleobase transmembrane transporter activity // UNIQUE-ID - GO:0008526 TYPES - GO:0005548 COMMON-NAME - phosphatidylinositol transporter activity SYNONYMS - phosphatidylinositol transfer // UNIQUE-ID - GO:0015247 TYPES - GO:0005548 COMMON-NAME - aminophospholipid transporter activity // UNIQUE-ID - GO:0017127 TYPES - GO:0015248 COMMON-NAME - cholesterol transporter activity // UNIQUE-ID - GO:0015334 TYPES - GO:0015198 COMMON-NAME - high affinity oligopeptide transporter activity // UNIQUE-ID - GO:0032561 TYPES - GO:0019001 TYPES - GO:0032555 COMMON-NAME - guanyl ribonucleotide binding // UNIQUE-ID - GO:0032559 TYPES - GO:0032555 TYPES - GO:0030554 COMMON-NAME - adenyl ribonucleotide binding // UNIQUE-ID - GO:0001874 TYPES - GO:0001872 TYPES - GO:0001873 COMMON-NAME - zymosan receptor activity // UNIQUE-ID - GO:0005540 TYPES - GO:0005539 COMMON-NAME - hyaluronic acid binding SYNONYMS - hyaluronan binding // UNIQUE-ID - GO:0008201 TYPES - GO:0005539 COMMON-NAME - heparin binding // UNIQUE-ID - GO:0003688 TYPES - GO:0043565 COMMON-NAME - DNA replication origin binding SYNONYMS - ARS binding // UNIQUE-ID - GO:0019237 TYPES - GO:0043565 COMMON-NAME - centromeric DNA binding SYNONYMS - centromere binding // UNIQUE-ID - GO:0042162 TYPES - GO:0043565 COMMON-NAME - telomeric DNA binding SYNONYMS - telomere binding // UNIQUE-ID - GO:0003690 TYPES - GO:0043566 COMMON-NAME - double-stranded DNA binding // UNIQUE-ID - GO:0003692 TYPES - GO:0043566 COMMON-NAME - left-handed Z-DNA binding // UNIQUE-ID - GO:0003697 TYPES - GO:0043566 COMMON-NAME - single-stranded DNA binding // UNIQUE-ID - GO:0008143 TYPES - GO:0003727 TYPES - GO:0003729 COMMON-NAME - poly(A) binding SYNONYMS - poly-A binding SYNONYMS - polyadenylate binding // UNIQUE-ID - GO:0008266 TYPES - GO:0003727 COMMON-NAME - poly(U) binding // UNIQUE-ID - GO:0017130 TYPES - GO:0003727 COMMON-NAME - poly(rC) binding // UNIQUE-ID - GO:0003730 TYPES - GO:0003729 COMMON-NAME - mRNA 3'-UTR binding SYNONYMS - mRNA 3' UTR binding // UNIQUE-ID - GO:0030350 TYPES - GO:0003729 COMMON-NAME - iron-responsive element binding SYNONYMS - IRE binding // UNIQUE-ID - GO:0017070 TYPES - GO:0017069 COMMON-NAME - U6 snRNA binding COMMENT - Note that this term may be useful for annotating small nuclear RNAs (snRNAs). // UNIQUE-ID - GO:0008097 TYPES - GO:0019843 COMMON-NAME - 5S rRNA binding // UNIQUE-ID - GO:0042134 TYPES - GO:0019843 COMMON-NAME - rRNA primary transcript binding // UNIQUE-ID - GO:0016149 TYPES - GO:0003747 COMMON-NAME - translation release factor activity, codon specific // UNIQUE-ID - GO:0017075 TYPES - GO:0019905 COMMON-NAME - syntaxin-1 binding // UNIQUE-ID - GO:0031690 TYPES - GO:0001664 COMMON-NAME - adrenergic receptor binding SYNONYMS - adrenergic receptor ligand // UNIQUE-ID - GO:0031701 TYPES - GO:0001664 COMMON-NAME - angiotensin receptor binding SYNONYMS - angiotensin receptor ligand // UNIQUE-ID - GO:0031705 TYPES - GO:0001664 COMMON-NAME - bombesin receptor binding SYNONYMS - bombesin receptor ligand // UNIQUE-ID - GO:0031716 TYPES - GO:0001664 COMMON-NAME - calcitonin receptor binding SYNONYMS - calcitonin receptor ligand // UNIQUE-ID - GO:0042379 TYPES - GO:0001664 COMMON-NAME - chemokine receptor binding SYNONYMS - chemokine receptor ligand // UNIQUE-ID - GO:0008009 TYPES - GO:0005125 TYPES - GO:0042379 COMMON-NAME - chemokine activity COMMENT - See also the molecular function term 'cytokine activity ; GO:0005125'. // UNIQUE-ID - GO:0005104 TYPES - GO:0005125 COMMON-NAME - fibroblast growth factor receptor binding COMMENT - Note that branchless is the Drosophila gene encoding fibroblast growth factor. SYNONYMS - FGF receptor binding SYNONYMS - FGFR binding SYNONYMS - FGFR ligand SYNONYMS - fibroblast growth factor SYNONYMS - fibroblast growth factor receptor ligand // UNIQUE-ID - GO:0005126 TYPES - GO:0005125 COMMON-NAME - hematopoietin/interferon-class (D200-domain) cytokine receptor binding SYNONYMS - hematopoietin/interferon-class (D200-domain) cytokine receptor ligand // UNIQUE-ID - GO:0005149 TYPES - GO:0005125 TYPES - GO:0008083 COMMON-NAME - interleukin-1 receptor binding SYNONYMS - IL-1 SYNONYMS - interleukin-1 receptor ligand // UNIQUE-ID - GO:0005171 TYPES - GO:0005125 COMMON-NAME - hepatocyte growth factor receptor binding SYNONYMS - hepatocyte growth factor SYNONYMS - hepatocyte growth factor receptor ligand SYNONYMS - HGF receptor binding // UNIQUE-ID - GO:0005176 TYPES - GO:0005125 COMMON-NAME - ErbB-2 class receptor binding SYNONYMS - ErbB-2 class receptor ligand SYNONYMS - HER2 receptor binding SYNONYMS - HER2 receptor ligand SYNONYMS - Neu receptor binding SYNONYMS - Neu receptor ligand // UNIQUE-ID - GO:0032813 TYPES - GO:0005125 COMMON-NAME - tumor necrosis factor receptor superfamily binding SYNONYMS - TNF receptor superfamily binding // UNIQUE-ID - GO:0045523 TYPES - GO:0005125 COMMON-NAME - interleukin-27 receptor binding SYNONYMS - IL-27 SYNONYMS - interleukin-27 receptor ligand // UNIQUE-ID - GO:0030353 TYPES - GO:0005104 TYPES - GO:0048019 COMMON-NAME - fibroblast growth factor receptor antagonist activity SYNONYMS - FGF receptor antagonist activity SYNONYMS - FGFR antagonist activity // UNIQUE-ID - GO:0005134 TYPES - GO:0005126 TYPES - GO:0008083 COMMON-NAME - interleukin-2 receptor binding SYNONYMS - IL-2 SYNONYMS - interleukin-2 receptor ligand // UNIQUE-ID - GO:0005135 TYPES - GO:0005126 TYPES - GO:0008083 COMMON-NAME - interleukin-3 receptor binding SYNONYMS - IL-3 SYNONYMS - interleukin-3 receptor ligand // UNIQUE-ID - GO:0005136 TYPES - GO:0005126 TYPES - GO:0008083 COMMON-NAME - interleukin-4 receptor binding SYNONYMS - IL-4 SYNONYMS - interleukin-4 receptor ligand // UNIQUE-ID - GO:0005137 TYPES - GO:0005126 TYPES - GO:0008083 COMMON-NAME - interleukin-5 receptor binding SYNONYMS - IL-5 SYNONYMS - interleukin-5 receptor ligand // UNIQUE-ID - GO:0005138 TYPES - GO:0005126 TYPES - GO:0008083 COMMON-NAME - interleukin-6 receptor binding SYNONYMS - IL-6 SYNONYMS - interleukin-6 receptor ligand // UNIQUE-ID - GO:0005139 TYPES - GO:0005126 TYPES - GO:0008083 COMMON-NAME - interleukin-7 receptor binding SYNONYMS - IL-7 SYNONYMS - interleukin-7 receptor ligand // UNIQUE-ID - GO:0005140 TYPES - GO:0005126 TYPES - GO:0008083 COMMON-NAME - interleukin-9 receptor binding SYNONYMS - IL-9 SYNONYMS - interleukin-9 receptor ligand // UNIQUE-ID - GO:0005142 TYPES - GO:0005126 TYPES - GO:0008083 COMMON-NAME - interleukin-11 receptor binding SYNONYMS - IL-11 SYNONYMS - interleukin-11 receptor ligand // UNIQUE-ID - GO:0005143 TYPES - GO:0005126 TYPES - GO:0008083 COMMON-NAME - interleukin-12 receptor binding SYNONYMS - IL-12 SYNONYMS - interleukin-12 receptor ligand // UNIQUE-ID - GO:0005129 TYPES - GO:0005128 TYPES - GO:0008083 COMMON-NAME - granulocyte macrophage colony-stimulating factor receptor binding SYNONYMS - GM-CSF receptor ligand SYNONYMS - GMC-SF receptor ligand SYNONYMS - granulocyte macrophage colony-stimulating factor receptor ligand SYNONYMS - granulocyte-macrophage colony stimulating factor // UNIQUE-ID - GO:0005183 TYPES - GO:0005179 COMMON-NAME - luteinizing hormone-releasing factor activity // UNIQUE-ID - GO:0005184 TYPES - GO:0005179 COMMON-NAME - neuropeptide hormone activity SYNONYMS - neurohormone // UNIQUE-ID - GO:0008437 TYPES - GO:0005179 COMMON-NAME - thyrotropin-releasing hormone activity // UNIQUE-ID - GO:0016608 TYPES - GO:0005179 COMMON-NAME - growth hormone-releasing hormone activity // UNIQUE-ID - GO:0030116 TYPES - GO:0008083 COMMON-NAME - glial cell line-derived neurotrophic factor receptor binding SYNONYMS - glial cell line-derived neurotrophic factor receptor ligand // UNIQUE-ID - GO:0042288 TYPES - GO:0042287 COMMON-NAME - MHC class I protein binding COMMENT - Note that this term does not include binding to the antigen peptide bound to the MHC protein. Consider also annotating to the molecular function term 'peptide antigen binding ; GO:0042605' or one of its children. SYNONYMS - alpha-beta T cell receptor activity SYNONYMS - gamma-delta T cell receptor activity SYNONYMS - major histocompatibility complex class I binding SYNONYMS - major histocompatibility complex class I ligand SYNONYMS - T cell receptor activity // UNIQUE-ID - GO:0042289 TYPES - GO:0042287 COMMON-NAME - MHC class II protein binding COMMENT - Note that this term does not include binding to the antigen peptide bound to the MHC protein. Consider also annotating to the molecular function term 'peptide antigen binding ; GO:0042605' or one of its children. SYNONYMS - major histocompatibility complex class II binding SYNONYMS - major histocompatibility complex class II ligand // UNIQUE-ID - GO:0035257 TYPES - GO:0051427 COMMON-NAME - nuclear hormone receptor binding // UNIQUE-ID - GO:0005041 TYPES - GO:0030169 TYPES - GO:0030228 COMMON-NAME - low-density lipoprotein receptor activity SYNONYMS - LDL receptor // UNIQUE-ID - GO:0003785 TYPES - GO:0003779 COMMON-NAME - actin monomer binding SYNONYMS - G actin binding // UNIQUE-ID - GO:0051015 TYPES - GO:0003779 COMMON-NAME - actin filament binding SYNONYMS - actin cross-linking activity SYNONYMS - F-actin binding // UNIQUE-ID - GO:0008017 TYPES - GO:0015631 COMMON-NAME - microtubule binding SYNONYMS - microtubule severing activity SYNONYMS - microtubule/chromatin interaction // UNIQUE-ID - GO:0043015 TYPES - GO:0015631 COMMON-NAME - gamma-tubulin binding SYNONYMS - gamma tubulin binding // UNIQUE-ID - GO:0031489 TYPES - GO:0017022 COMMON-NAME - myosin V binding // UNIQUE-ID - GO:0030375 TYPES - GO:0030374 COMMON-NAME - thyroid hormone receptor coactivator activity SYNONYMS - thyroid hormone receptor co-activator activity // UNIQUE-ID - GO:0004908 TYPES - GO:0004907 TYPES - GO:0019966 COMMON-NAME - interleukin-1 receptor activity SYNONYMS - IL-1R // UNIQUE-ID - GO:0019967 TYPES - GO:0019966 COMMON-NAME - interleukin-1, Type I, activating binding SYNONYMS - IL-1 type I, activating binding // UNIQUE-ID - GO:0019968 TYPES - GO:0019966 COMMON-NAME - interleukin-1, Type II, blocking binding SYNONYMS - IL-1 type II, blocking binding // UNIQUE-ID - GO:0004920 TYPES - GO:0004907 TYPES - GO:0019969 COMMON-NAME - interleukin-10 receptor activity SYNONYMS - IL-10R // UNIQUE-ID - GO:0004921 TYPES - GO:0004907 TYPES - GO:0019970 COMMON-NAME - interleukin-11 receptor activity SYNONYMS - gp130 SYNONYMS - IL-11R // UNIQUE-ID - GO:0004911 TYPES - GO:0004907 TYPES - GO:0019976 COMMON-NAME - interleukin-2 receptor activity SYNONYMS - IL-2R // UNIQUE-ID - GO:0048406 TYPES - GO:0043121 COMMON-NAME - nerve growth factor binding SYNONYMS - neurotrophin TRKA receptor activity SYNONYMS - NGF binding // UNIQUE-ID - GO:0019901 TYPES - GO:0019900 COMMON-NAME - protein kinase binding // UNIQUE-ID - GO:0019903 TYPES - GO:0019902 COMMON-NAME - protein phosphatase binding // UNIQUE-ID - GO:0031267 TYPES - GO:0051020 COMMON-NAME - small GTPase binding // UNIQUE-ID - GO:0019957 TYPES - GO:0019956 COMMON-NAME - C-C chemokine binding // UNIQUE-ID - GO:0019958 TYPES - GO:0019956 COMMON-NAME - C-X-C chemokine binding // UNIQUE-ID - GO:0019959 TYPES - GO:0019958 TYPES - GO:0019965 COMMON-NAME - interleukin-8 binding SYNONYMS - IL-8 binding // UNIQUE-ID - GO:0004904 TYPES - GO:0004896 TYPES - GO:0019961 COMMON-NAME - interferon receptor activity // UNIQUE-ID - GO:0019962 TYPES - GO:0019961 COMMON-NAME - interferon-alpha/beta binding // UNIQUE-ID - GO:0004907 TYPES - GO:0004896 TYPES - GO:0019965 COMMON-NAME - interleukin receptor activity SYNONYMS - IL receptor // UNIQUE-ID - GO:0019972 TYPES - GO:0019965 COMMON-NAME - interleukin-12 binding SYNONYMS - IL-12 binding // UNIQUE-ID - GO:0042019 TYPES - GO:0019965 COMMON-NAME - interleukin-23 binding SYNONYMS - IL-23 binding // UNIQUE-ID - GO:0045513 TYPES - GO:0019965 COMMON-NAME - interleukin-27 binding SYNONYMS - IL-27 binding // UNIQUE-ID - GO:0005031 TYPES - GO:0005035 TYPES - GO:0043120 COMMON-NAME - tumor necrosis factor receptor activity SYNONYMS - NGF/TNF (6 C-domain) receptor activity SYNONYMS - TNF receptor activity SYNONYMS - TNF receptor activity, type I SYNONYMS - TNF receptor activity, type II SYNONYMS - tumor necrosis factor receptor activity, type I SYNONYMS - tumor necrosis factor receptor activity, type II // UNIQUE-ID - GO:0019763 TYPES - GO:0004888 TYPES - GO:0019865 COMMON-NAME - immunoglobulin receptor activity SYNONYMS - FC receptor activity // UNIQUE-ID - GO:0019863 TYPES - GO:0019865 COMMON-NAME - IgE binding // UNIQUE-ID - GO:0019864 TYPES - GO:0019865 COMMON-NAME - IgG binding // UNIQUE-ID - GO:0030160 TYPES - GO:0030159 COMMON-NAME - GKAP/Homer scaffold activity SYNONYMS - GKAP/Homer scaffold protein SYNONYMS - postsynaptic density scaffold protein // UNIQUE-ID - GO:0001784 TYPES - GO:0045309 COMMON-NAME - phosphotyrosine binding // UNIQUE-ID - GO:0005498 TYPES - GO:0032934 COMMON-NAME - sterol carrier activity // UNIQUE-ID - GO:0005545 TYPES - GO:0035091 COMMON-NAME - phosphatidylinositol binding // UNIQUE-ID - GO:0005547 TYPES - GO:0035091 COMMON-NAME - phosphatidylinositol-3,4,5-triphosphate binding // UNIQUE-ID - GO:0048503 TYPES - GO:0035091 COMMON-NAME - GPI anchor binding SYNONYMS - glycosylphosphatidylinositol binding // UNIQUE-ID - GO:0005536 TYPES - GO:0048029 COMMON-NAME - glucose binding // UNIQUE-ID - GO:0005537 TYPES - GO:0048029 COMMON-NAME - mannose binding SYNONYMS - mannose binding lectin // UNIQUE-ID - GO:0030395 TYPES - GO:0048030 COMMON-NAME - lactose binding // UNIQUE-ID - GO:0005046 TYPES - GO:0046923 COMMON-NAME - KDEL sequence binding SYNONYMS - KDEL receptor activity // UNIQUE-ID - GO:0000287 TYPES - GO:0046872 COMMON-NAME - magnesium ion binding SYNONYMS - magnesium binding // UNIQUE-ID - GO:0005509 TYPES - GO:0046872 COMMON-NAME - calcium ion binding SYNONYMS - calcium ion storage activity // UNIQUE-ID - GO:0031420 TYPES - GO:0046872 COMMON-NAME - alkali metal ion binding // UNIQUE-ID - GO:0046914 TYPES - GO:0046872 COMMON-NAME - transition metal ion binding // UNIQUE-ID - GO:0004861 TYPES - GO:0004860 COMMON-NAME - cyclin-dependent protein kinase inhibitor activity SYNONYMS - CDK inhibitor SYNONYMS - cyclin dependent kinase inhibitor SYNONYMS - cyclin dependent protein kinase inhibitor activity SYNONYMS - cyclin-dependent kinase inhibitor // UNIQUE-ID - GO:0004862 TYPES - GO:0004860 COMMON-NAME - cAMP-dependent protein kinase inhibitor activity // UNIQUE-ID - GO:0004865 TYPES - GO:0004864 COMMON-NAME - type 1 serine/threonine specific protein phosphatase inhibitor activity // UNIQUE-ID - GO:0004867 TYPES - GO:0004866 COMMON-NAME - serine-type endopeptidase inhibitor activity SYNONYMS - serine protease inhibitor activity SYNONYMS - serine proteinase inhibitor activity SYNONYMS - serpin activity // UNIQUE-ID - GO:0004869 TYPES - GO:0004866 COMMON-NAME - cysteine protease inhibitor activity SYNONYMS - thiol protease inhibitor // UNIQUE-ID - GO:0008191 TYPES - GO:0004866 COMMON-NAME - metalloendopeptidase inhibitor activity SYNONYMS - metalloprotease inhibitor SYNONYMS - metalloproteinase inhibitor // UNIQUE-ID - GO:0017114 TYPES - GO:0004866 COMMON-NAME - wide-spectrum protease inhibitor activity SYNONYMS - wide-spectrum proteinase inhibitor // UNIQUE-ID - GO:0019834 TYPES - GO:0004859 COMMON-NAME - phospholipase A2 inhibitor activity // UNIQUE-ID - GO:0005097 TYPES - GO:0005099 COMMON-NAME - Rab GTPase activator activity // UNIQUE-ID - GO:0005098 TYPES - GO:0005099 COMMON-NAME - Ran GTPase activator activity SYNONYMS - RanGAP // UNIQUE-ID - GO:0005100 TYPES - GO:0005099 COMMON-NAME - Rho GTPase activator activity // UNIQUE-ID - GO:0016534 TYPES - GO:0030295 COMMON-NAME - cyclin-dependent protein kinase 5 activator activity SYNONYMS - cyclin-dependent protein kinase 5 activator, intrinsic catalyst activity // UNIQUE-ID - GO:0005087 TYPES - GO:0005088 COMMON-NAME - Ran guanyl-nucleotide exchange factor activity SYNONYMS - RCC1 // UNIQUE-ID - GO:0005089 TYPES - GO:0005088 COMMON-NAME - Rho guanyl-nucleotide exchange factor activity SYNONYMS - Rho guanine nucleotide exchange factor SYNONYMS - RhoGEF // UNIQUE-ID - GO:0008321 TYPES - GO:0005088 COMMON-NAME - Ral guanyl-nucleotide exchange factor activity // UNIQUE-ID - GO:0017112 TYPES - GO:0005088 COMMON-NAME - Rab guanyl-nucleotide exchange factor activity // UNIQUE-ID - GO:0003707 TYPES - GO:0004879 COMMON-NAME - steroid hormone receptor activity COMMENT - Note that this term represents a function and not a gene product. Consider also annotating to the molecular function term 'transcription regulator activity ; GO:0030528'. // UNIQUE-ID - GO:0003708 TYPES - GO:0004879 COMMON-NAME - retinoic acid receptor activity COMMENT - Note that this term represents a function and not a gene product. Consider also annotating to the molecular function term 'transcription regulator activity ; GO:0030528'. SYNONYMS - vitamin A receptor activity // UNIQUE-ID - GO:0004887 TYPES - GO:0004879 COMMON-NAME - thyroid hormone receptor activity COMMENT - Note that this term represents a function and not a gene product. Consider also annotating to the molecular function term 'transcription regulator activity ; GO:0030528'. // UNIQUE-ID - GO:0004896 TYPES - GO:0004888 COMMON-NAME - hematopoietin/interferon-class (D200-domain) cytokine receptor activity // UNIQUE-ID - GO:0004926 TYPES - GO:0004888 COMMON-NAME - non-G-protein coupled 7TM receptor activity SYNONYMS - non G protein coupled 7TM receptor activity SYNONYMS - non-G-protein-coupled 7TM receptor activity // UNIQUE-ID - GO:0004930 TYPES - GO:0004888 COMMON-NAME - G-protein coupled receptor activity SYNONYMS - G protein coupled receptor activity SYNONYMS - G protein linked receptor activity SYNONYMS - G-protein coupled receptor activity, unknown ligand SYNONYMS - G-protein linked receptor activity SYNONYMS - G-protein-coupled receptor activity SYNONYMS - GPCR activity SYNONYMS - orphan G protein coupled receptor activity SYNONYMS - orphan G-protein coupled receptor activity SYNONYMS - orphan GPCR activity // UNIQUE-ID - GO:0004998 TYPES - GO:0004888 COMMON-NAME - transferrin receptor activity // UNIQUE-ID - GO:0005034 TYPES - GO:0004888 COMMON-NAME - osmosensor activity // UNIQUE-ID - GO:0005035 TYPES - GO:0004888 COMMON-NAME - death receptor activity // UNIQUE-ID - GO:0005042 TYPES - GO:0004888 COMMON-NAME - netrin receptor activity // UNIQUE-ID - GO:0005044 TYPES - GO:0004888 COMMON-NAME - scavenger receptor activity COMMENT - Note that many gene products that are called scavenger receptors have a broad range of potential ligands and also can be annotated to 'pattern recognition receptor activity ; GO:0008329' or its child terms, or to 'lipoprotein receptor activity ; GO:0030228' or its child terms. SYNONYMS - macrophage receptor activity // UNIQUE-ID - GO:0008046 TYPES - GO:0004888 COMMON-NAME - axon guidance receptor activity // UNIQUE-ID - GO:0008066 TYPES - GO:0004888 COMMON-NAME - glutamate receptor activity // UNIQUE-ID - GO:0008158 TYPES - GO:0004888 COMMON-NAME - hedgehog receptor activity SYNONYMS - patched activity // UNIQUE-ID - GO:0008281 TYPES - GO:0004888 COMMON-NAME - sulfonylurea receptor activity COMMENT - Note that this term represents an activity and not a gene product. Consider also annotating to the molecular function term 'potassium channel activity ; GO:0005267'. SYNONYMS - sulphonylurea receptor activity // UNIQUE-ID - GO:0016502 TYPES - GO:0004888 COMMON-NAME - nucleotide receptor activity // UNIQUE-ID - GO:0016524 TYPES - GO:0004888 COMMON-NAME - latrotoxin receptor activity SYNONYMS - latrophilin // UNIQUE-ID - GO:0016917 TYPES - GO:0004888 COMMON-NAME - GABA receptor activity COMMENT - See also the molecular function term 'neurotransmitter receptor activity ; GO:0030594'. SYNONYMS - 4-aminobutanoate receptor activity SYNONYMS - 4-aminobutyrate receptor activity SYNONYMS - GABA binding SYNONYMS - gamma-aminobutyrate binding SYNONYMS - gamma-aminobutyric acid binding SYNONYMS - gamma-aminobutyric acid receptor activity // UNIQUE-ID - GO:0017154 TYPES - GO:0004888 COMMON-NAME - semaphorin receptor activity // UNIQUE-ID - GO:0042813 TYPES - GO:0004888 COMMON-NAME - Wnt receptor activity SYNONYMS - frizzled receptor activity SYNONYMS - frizzled-2 receptor activity // UNIQUE-ID - GO:0045233 TYPES - GO:0004888 COMMON-NAME - natural killer cell receptor activity SYNONYMS - Ly49i SYNONYMS - NK cell receptor activity // UNIQUE-ID - GO:0015027 TYPES - GO:0015026 COMMON-NAME - coreceptor, soluble ligand activity // UNIQUE-ID - GO:0005069 TYPES - GO:0005066 COMMON-NAME - transmembrane receptor protein tyrosine kinase docking protein activity // UNIQUE-ID - GO:0005072 TYPES - GO:0005071 COMMON-NAME - transforming growth factor beta receptor, cytoplasmic mediator activity COMMENT - Note that this term and its children are useful for annotating proteins of the SMAD family. SYNONYMS - TGF-beta receptor, cytoplasmic mediator activity SYNONYMS - TGFbeta receptor, cytoplasmic mediator activity // UNIQUE-ID - GO:0030547 TYPES - GO:0030545 COMMON-NAME - receptor inhibitor activity // UNIQUE-ID - GO:0030548 TYPES - GO:0030545 COMMON-NAME - acetylcholine receptor regulator activity // UNIQUE-ID - GO:0005777 TYPES - GO:0042579 COMMON-NAME - peroxisome SYNONYMS - peroxisomal fatty acyl transporter SYNONYMS - peroxisomal membrane transporter SYNONYMS - peroxisome receptor SYNONYMS - peroxisome vesicle // UNIQUE-ID - GO:0042598 TYPES - GO:0005624 COMMON-NAME - vesicular fraction COMMENT - Note that this term refers to disrupted cells, and does not necessarily correspond to any specific structure(s) in an intact cell. // UNIQUE-ID - GO:0005887 TYPES - GO:0016021 TYPES - GO:0031226 COMMON-NAME - integral to plasma membrane SYNONYMS - proteoglycan integral to plasma membrane SYNONYMS - transmembrane ephrin // UNIQUE-ID - GO:0046349 TYPES - GO:0006040 TYPES - GO:0046364 COMMON-NAME - amino sugar biosynthetic process // UNIQUE-ID - GO:0006006 TYPES - GO:0019318 COMMON-NAME - glucose metabolic process // UNIQUE-ID - GO:0019319 TYPES - GO:0019318 TYPES - GO:0046364 COMMON-NAME - hexose biosynthetic process // UNIQUE-ID - GO:0019320 TYPES - GO:0019318 TYPES - GO:0046365 COMMON-NAME - hexose catabolic process // UNIQUE-ID - GO:0019692 TYPES - GO:0006014 COMMON-NAME - deoxyribose phosphate metabolic process SYNONYMS - deoxyribose phosphate metabolism // UNIQUE-ID - GO:0006695 TYPES - GO:0008203 TYPES - GO:0016126 COMMON-NAME - cholesterol biosynthetic process SYNONYMS - cholesterol anabolism SYNONYMS - cholesterol formation SYNONYMS - cholesterol synthesis // UNIQUE-ID - GO:0042423 TYPES - GO:0006584 TYPES - GO:0042401 COMMON-NAME - catecholamine biosynthesis SYNONYMS - catecholamine anabolism SYNONYMS - catecholamine formation SYNONYMS - catecholamine synthesis // UNIQUE-ID - GO:0019540 TYPES - GO:0009712 TYPES - GO:0019290 COMMON-NAME - siderophore biosynthetic process from catechol SYNONYMS - siderochrome biosynthesis from catechol // UNIQUE-ID - GO:0009239 TYPES - GO:0009238 TYPES - GO:0019540 COMMON-NAME - enterobactin biosynthetic process SYNONYMS - enterochelin biosynthesis // UNIQUE-ID - GO:0006071 TYPES - GO:0019400 COMMON-NAME - glycerol metabolic process // UNIQUE-ID - GO:0006069 TYPES - GO:0006067 COMMON-NAME - ethanol oxidation // UNIQUE-ID - GO:0006260 TYPES - GO:0034645 TYPES - GO:0006259 COMMON-NAME - DNA replication COMMENT - See also the biological process terms 'DNA-dependent DNA replication ; GO:0006261' and 'RNA-dependent DNA replication ; GO:0006278'. SYNONYMS - DNA biosynthesis SYNONYMS - DNA replication accessory factor SYNONYMS - DNA replication factor SYNONYMS - DNA synthesis // UNIQUE-ID - GO:0006281 TYPES - GO:0006259 TYPES - GO:0034984 COMMON-NAME - DNA repair // UNIQUE-ID - GO:0009307 TYPES - GO:0006304 COMMON-NAME - DNA restriction-modification system // UNIQUE-ID - GO:0006351 TYPES - GO:0032774 TYPES - GO:0006350 COMMON-NAME - transcription, DNA-dependent // UNIQUE-ID - GO:0006396 TYPES - GO:0016070 COMMON-NAME - RNA processing // UNIQUE-ID - GO:0006401 TYPES - GO:0016070 TYPES - GO:0044265 COMMON-NAME - RNA catabolic process // UNIQUE-ID - GO:0034660 TYPES - GO:0016070 COMMON-NAME - ncRNA metabolic process SYNONYMS - ncRNA metabolism // UNIQUE-ID - GO:0006400 TYPES - GO:0008033 TYPES - GO:0009451 COMMON-NAME - tRNA modification COMMENT - The term 'RNA editing' (GO:0016547) was merged into 'RNA modification' (GO:0009451) on the basis of statements in the preface of Modification and Editing of RNA (ISBN:1555811337) that there is no clear distinction between modification and editing. Parallel changes were made for substrate (e.g. tRNA, rRNA, etc.) specific child terms of 'RNA editing'. // UNIQUE-ID - GO:0034404 TYPES - GO:0034654 TYPES - GO:0055086 COMMON-NAME - nucleobase, nucleoside and nucleotide biosynthetic process SYNONYMS - nucleobase, nucleoside and nucleotide anabolism SYNONYMS - nucleobase, nucleoside and nucleotide biosynthesis SYNONYMS - nucleobase, nucleoside and nucleotide formation SYNONYMS - nucleobase, nucleoside and nucleotide synthesis // UNIQUE-ID - GO:0006753 TYPES - GO:0055086 COMMON-NAME - nucleoside phosphate metabolic process SYNONYMS - nucleoside phosphate metabolism // UNIQUE-ID - GO:0009116 TYPES - GO:0055086 COMMON-NAME - nucleoside metabolic process // UNIQUE-ID - GO:0015949 TYPES - GO:0055086 COMMON-NAME - nucleobase, nucleoside and nucleotide interconversion // UNIQUE-ID - GO:0006164 TYPES - GO:0006163 TYPES - GO:0009165 COMMON-NAME - purine nucleotide biosynthetic process // UNIQUE-ID - GO:0009150 TYPES - GO:0006163 TYPES - GO:0009259 COMMON-NAME - purine ribonucleotide metabolic process // UNIQUE-ID - GO:0006221 TYPES - GO:0006220 TYPES - GO:0009165 COMMON-NAME - pyrimidine nucleotide biosynthetic process // UNIQUE-ID - GO:0009398 TYPES - GO:0006746 TYPES - GO:0009108 TYPES - GO:0009156 TYPES - GO:0042727 TYPES - GO:0044271 TYPES - GO:0046444 COMMON-NAME - FMN biosynthetic process // UNIQUE-ID - GO:0009124 TYPES - GO:0009123 TYPES - GO:0009165 COMMON-NAME - nucleoside monophosphate biosynthetic process SYNONYMS - nucleoside monophosphate anabolism SYNONYMS - nucleoside monophosphate formation SYNONYMS - nucleoside monophosphate synthesis // UNIQUE-ID - GO:0046444 TYPES - GO:0009161 TYPES - GO:0042726 TYPES - GO:0006732 COMMON-NAME - FMN metabolic process // UNIQUE-ID - GO:0009260 TYPES - GO:0009259 TYPES - GO:0009165 COMMON-NAME - ribonucleotide biosynthetic process SYNONYMS - ribonucleotide anabolism SYNONYMS - ribonucleotide formation SYNONYMS - ribonucleotide synthesis // UNIQUE-ID - GO:0009263 TYPES - GO:0009165 TYPES - GO:0009262 COMMON-NAME - deoxyribonucleotide biosynthetic process SYNONYMS - deoxyribonucleotide anabolism SYNONYMS - deoxyribonucleotide formation SYNONYMS - deoxyribonucleotide synthesis // UNIQUE-ID - GO:0019363 TYPES - GO:0009108 TYPES - GO:0009165 TYPES - GO:0019362 TYPES - GO:0042364 COMMON-NAME - pyridine nucleotide biosynthetic process // UNIQUE-ID - GO:0019674 TYPES - GO:0046496 TYPES - GO:0006769 COMMON-NAME - NAD metabolic process SYNONYMS - NAD (oxidized) metabolism SYNONYMS - nicotinamide adenine dinucleotide metabolism SYNONYMS - oxidized NAD metabolism SYNONYMS - oxidized nicotinamide adenine dinucleotide metabolism // UNIQUE-ID - GO:0000256 TYPES - GO:0000255 TYPES - GO:0043605 TYPES - GO:0046700 COMMON-NAME - allantoin catabolic process SYNONYMS - allantoin breakdown SYNONYMS - allantoin degradation // UNIQUE-ID - GO:0006023 TYPES - GO:0006022 TYPES - GO:0000271 COMMON-NAME - aminoglycan biosynthetic process SYNONYMS - aminoglycan anabolism SYNONYMS - aminoglycan biosynthesis SYNONYMS - aminoglycan formation SYNONYMS - aminoglycan synthesis // UNIQUE-ID - GO:0030203 TYPES - GO:0006022 COMMON-NAME - glycosaminoglycan metabolic process SYNONYMS - glycosaminoglycan metabolism // UNIQUE-ID - GO:0009252 TYPES - GO:0000270 TYPES - GO:0006024 TYPES - GO:0044038 COMMON-NAME - peptidoglycan biosynthetic process SYNONYMS - murein biosynthesis // UNIQUE-ID - GO:0008652 TYPES - GO:0006520 TYPES - GO:0009309 TYPES - GO:0046394 COMMON-NAME - cellular amino acid biosynthetic process // UNIQUE-ID - GO:0042401 TYPES - GO:0006576 TYPES - GO:0009309 TYPES - GO:0042398 COMMON-NAME - cellular biogenic amine biosynthetic process // UNIQUE-ID - GO:0000097 TYPES - GO:0000096 TYPES - GO:0008652 TYPES - GO:0044272 COMMON-NAME - sulfur amino acid biosynthetic process SYNONYMS - sulfur amino acid anabolism SYNONYMS - sulfur amino acid formation SYNONYMS - sulfur amino acid synthesis SYNONYMS - sulphur amino acid biosynthesis // UNIQUE-ID - GO:0009073 TYPES - GO:0008652 TYPES - GO:0009072 TYPES - GO:0019438 TYPES - GO:0046417 COMMON-NAME - aromatic amino acid family biosynthetic process // UNIQUE-ID - GO:0046656 TYPES - GO:0008652 TYPES - GO:0009396 TYPES - GO:0042364 TYPES - GO:0042559 TYPES - GO:0046655 COMMON-NAME - folic acid biosynthetic process SYNONYMS - folate biosynthesis SYNONYMS - vitamin B9 biosynthesis SYNONYMS - vitamin M biosynthesis // UNIQUE-ID - GO:0009089 TYPES - GO:0009085 TYPES - GO:0046451 COMMON-NAME - lysine biosynthetic process via diaminopimelate // UNIQUE-ID - GO:0000105 TYPES - GO:0006547 TYPES - GO:0009076 TYPES - GO:0018130 COMMON-NAME - histidine biosynthetic process // UNIQUE-ID - GO:0006561 TYPES - GO:0006560 TYPES - GO:0009084 TYPES - GO:0018130 COMMON-NAME - proline biosynthetic process // UNIQUE-ID - GO:0046219 TYPES - GO:0006586 TYPES - GO:0018130 TYPES - GO:0042401 TYPES - GO:0042435 COMMON-NAME - indolalkylamine biosynthetic process // UNIQUE-ID - GO:0009063 TYPES - GO:0009310 TYPES - GO:0046395 TYPES - GO:0006520 COMMON-NAME - cellular amino acid catabolic process // UNIQUE-ID - GO:0042402 TYPES - GO:0006576 TYPES - GO:0009310 TYPES - GO:0042219 COMMON-NAME - cellular biogenic amine catabolic process // UNIQUE-ID - GO:0009450 TYPES - GO:0042219 TYPES - GO:0009448 COMMON-NAME - gamma-aminobutyric acid catabolic process COMMENT - See also the biological process term 'neurotransmitter catabolic process ; GO:0042135'. SYNONYMS - 4-aminobutanoate catabolism SYNONYMS - 4-aminobutyrate catabolism SYNONYMS - GABA catabolism // UNIQUE-ID - GO:0006576 TYPES - GO:0006575 TYPES - GO:0044106 COMMON-NAME - cellular biogenic amine metabolic process // UNIQUE-ID - GO:0009064 TYPES - GO:0006520 COMMON-NAME - glutamine family amino acid metabolic process // UNIQUE-ID - GO:0009066 TYPES - GO:0006520 COMMON-NAME - aspartate family amino acid metabolic process // UNIQUE-ID - GO:0009069 TYPES - GO:0006520 COMMON-NAME - serine family amino acid metabolic process // UNIQUE-ID - GO:0009075 TYPES - GO:0006520 COMMON-NAME - histidine family amino acid metabolic process // UNIQUE-ID - GO:0009078 TYPES - GO:0006520 COMMON-NAME - pyruvate family amino acid metabolic process // UNIQUE-ID - GO:0009081 TYPES - GO:0006520 COMMON-NAME - branched chain family amino acid metabolic process // UNIQUE-ID - GO:0043038 TYPES - GO:0006520 COMMON-NAME - amino acid activation // UNIQUE-ID - GO:0006534 TYPES - GO:0009069 TYPES - GO:0000096 COMMON-NAME - cysteine metabolic process // UNIQUE-ID - GO:0006555 TYPES - GO:0000096 TYPES - GO:0009066 COMMON-NAME - methionine metabolic process SYNONYMS - methionine and threonine metabolism // UNIQUE-ID - GO:0006558 TYPES - GO:0009072 COMMON-NAME - L-phenylalanine metabolic process SYNONYMS - phenylalanine metabolism // UNIQUE-ID - GO:0006568 TYPES - GO:0006586 TYPES - GO:0009072 COMMON-NAME - tryptophan metabolic process // UNIQUE-ID - GO:0006570 TYPES - GO:0009072 COMMON-NAME - tyrosine metabolic process // UNIQUE-ID - GO:0006586 TYPES - GO:0006576 TYPES - GO:0042434 COMMON-NAME - indolalkylamine metabolic process SYNONYMS - indolamine metabolism // UNIQUE-ID - GO:0009437 TYPES - GO:0006577 TYPES - GO:0032787 TYPES - GO:0006767 COMMON-NAME - carnitine metabolic process SYNONYMS - vitamin Bt metabolism // UNIQUE-ID - GO:0006779 TYPES - GO:0006778 TYPES - GO:0033014 TYPES - GO:0051188 COMMON-NAME - porphyrin biosynthetic process SYNONYMS - porphyrin anabolism SYNONYMS - porphyrin formation SYNONYMS - porphyrin synthesis // UNIQUE-ID - GO:0009235 TYPES - GO:0006778 TYPES - GO:0006767 COMMON-NAME - cobalamin metabolic process SYNONYMS - vitamin B12 metabolism SYNONYMS - vitamin B12 reduction // UNIQUE-ID - GO:0009440 TYPES - GO:0009439 TYPES - GO:0044270 COMMON-NAME - cyanate catabolic process // UNIQUE-ID - GO:0043605 TYPES - GO:0043603 TYPES - GO:0044270 COMMON-NAME - cellular amide catabolic process // UNIQUE-ID - GO:0032324 TYPES - GO:0042559 TYPES - GO:0043545 TYPES - GO:0051188 COMMON-NAME - molybdopterin cofactor biosynthetic process SYNONYMS - molybdopterin cofactor anabolism SYNONYMS - molybdopterin cofactor biosynthesis SYNONYMS - molybdopterin cofactor formation SYNONYMS - molybdopterin cofactor synthesis // UNIQUE-ID - GO:0046654 TYPES - GO:0009396 TYPES - GO:0042559 TYPES - GO:0046653 COMMON-NAME - tetrahydrofolate biosynthetic process SYNONYMS - tetrahydrofolate anabolism SYNONYMS - tetrahydrofolate biosynthesis SYNONYMS - tetrahydrofolate formation SYNONYMS - tetrahydrofolate synthesis // UNIQUE-ID - GO:0009228 TYPES - GO:0006772 TYPES - GO:0042724 COMMON-NAME - thiamin biosynthetic process SYNONYMS - thiamine biosynthesis SYNONYMS - vitamin B1 biosynthesis // UNIQUE-ID - GO:0019720 TYPES - GO:0043545 COMMON-NAME - Mo-molybdopterin cofactor metabolic process SYNONYMS - molybdopterin cofactor metabolism // UNIQUE-ID - GO:0009256 TYPES - GO:0046653 COMMON-NAME - 10-formyltetrahydrofolate metabolic process SYNONYMS - 10-formyl-THF metabolism // UNIQUE-ID - GO:0009050 TYPES - GO:0006516 TYPES - GO:0043171 COMMON-NAME - glycopeptide catabolic process SYNONYMS - glycopeptide degradation // UNIQUE-ID - GO:0006508 TYPES - GO:0030163 COMMON-NAME - proteolysis // UNIQUE-ID - GO:0044257 TYPES - GO:0030163 TYPES - GO:0044265 TYPES - GO:0044267 COMMON-NAME - cellular protein catabolism // UNIQUE-ID - GO:0034962 TYPES - GO:0043285 TYPES - GO:0044265 TYPES - GO:0034960 COMMON-NAME - cellular biopolymer catabolic process SYNONYMS - cellular biopolymer catabolism SYNONYMS - cellular biopolymer degradation // UNIQUE-ID - GO:0009062 TYPES - GO:0006631 TYPES - GO:0044242 TYPES - GO:0046395 COMMON-NAME - fatty acid catabolic process SYNONYMS - fatty acid breakdown SYNONYMS - fatty acid catabolism SYNONYMS - fatty acid degradation // UNIQUE-ID - GO:0046395 TYPES - GO:0016054 TYPES - GO:0019752 COMMON-NAME - carboxylic acid catabolic process SYNONYMS - carboxylic acid breakdown SYNONYMS - carboxylic acid degradation // UNIQUE-ID - GO:0009436 TYPES - GO:0046185 TYPES - GO:0046395 TYPES - GO:0046487 COMMON-NAME - glyoxylate catabolic process // UNIQUE-ID - GO:0009109 TYPES - GO:0006732 TYPES - GO:0051187 COMMON-NAME - coenzyme catabolic process SYNONYMS - coenzyme breakdown SYNONYMS - coenzyme degradation SYNONYMS - coenzyme and prosthetic group catabolism // UNIQUE-ID - GO:0009245 TYPES - GO:0046493 TYPES - GO:0009247 TYPES - GO:0008654 COMMON-NAME - lipid A biosynthetic process // UNIQUE-ID - GO:0046474 TYPES - GO:0006650 TYPES - GO:0008654 TYPES - GO:0045017 COMMON-NAME - glycerophospholipid biosynthetic process SYNONYMS - phosphoglyceride biosynthesis // UNIQUE-ID - GO:0009247 TYPES - GO:0006664 TYPES - GO:0046467 COMMON-NAME - glycolipid biosynthetic process SYNONYMS - glycolipid anabolism SYNONYMS - glycolipid biosynthesis SYNONYMS - glycolipid formation SYNONYMS - glycolipid synthesis // UNIQUE-ID - GO:0033692 TYPES - GO:0044264 TYPES - GO:0000271 TYPES - GO:0034645 TYPES - GO:0034637 COMMON-NAME - cellular polysaccharide biosynthetic process SYNONYMS - cellular glycan biosynthesis SYNONYMS - cellular glycan biosynthetic process SYNONYMS - cellular polysaccharide anabolism SYNONYMS - cellular polysaccharide biosynthesis SYNONYMS - cellular polysaccharide formation SYNONYMS - cellular polysaccharide synthesis // UNIQUE-ID - GO:0006412 TYPES - GO:0034645 TYPES - GO:0044267 COMMON-NAME - translation // UNIQUE-ID - GO:0034961 TYPES - GO:0034645 TYPES - GO:0034960 TYPES - GO:0043284 COMMON-NAME - cellular biopolymer biosynthetic process SYNONYMS - cellular biopolymer anabolism SYNONYMS - cellular biopolymer biosynthesis SYNONYMS - cellular biopolymer formation SYNONYMS - cellular biopolymer synthesis // UNIQUE-ID - GO:0070589 TYPES - GO:0034645 COMMON-NAME - cellular component macromolecule biosynthetic process SYNONYMS - cellular component macromolecule biosynthesis // UNIQUE-ID - GO:0009244 TYPES - GO:0009312 TYPES - GO:0046401 COMMON-NAME - lipopolysaccharide core region biosynthetic process // UNIQUE-ID - GO:0042364 TYPES - GO:0006767 TYPES - GO:0009110 COMMON-NAME - water-soluble vitamin biosynthetic process // UNIQUE-ID - GO:0042819 TYPES - GO:0042364 TYPES - GO:0042816 COMMON-NAME - vitamin B6 biosynthetic process // UNIQUE-ID - GO:0042823 TYPES - GO:0009108 TYPES - GO:0042819 TYPES - GO:0042822 COMMON-NAME - pyridoxal phosphate biosynthetic process SYNONYMS - active vitamin B6 biosynthesis SYNONYMS - pyridoxal phosphate anabolism SYNONYMS - pyridoxal phosphate formation SYNONYMS - pyridoxal phosphate synthesis // UNIQUE-ID - GO:0009443 TYPES - GO:0008615 TYPES - GO:0042823 TYPES - GO:0043094 COMMON-NAME - pyridoxal 5'-phosphate salvage SYNONYMS - pyridoxal 5' phosphate salvage // UNIQUE-ID - GO:0046394 TYPES - GO:0016053 TYPES - GO:0019752 COMMON-NAME - carboxylic acid biosynthetic process // UNIQUE-ID - GO:0009105 TYPES - GO:0000273 TYPES - GO:0009108 TYPES - GO:0018130 TYPES - GO:0044272 TYPES - GO:0046394 COMMON-NAME - lipoic acid biosynthetic process SYNONYMS - lipoic acid anabolism SYNONYMS - lipoic acid formation SYNONYMS - lipoic acid synthesis // UNIQUE-ID - GO:0006750 TYPES - GO:0006749 TYPES - GO:0009108 TYPES - GO:0042398 TYPES - GO:0043043 TYPES - GO:0044272 COMMON-NAME - glutathione biosynthetic process // UNIQUE-ID - GO:0019184 TYPES - GO:0043043 COMMON-NAME - nonribosomal peptide biosynthetic process SYNONYMS - nonribosomal peptide synthesis // UNIQUE-ID - GO:0019290 TYPES - GO:0009237 TYPES - GO:0019184 TYPES - GO:0051188 COMMON-NAME - siderophore biosynthetic process COMMENT - See also the biological process term 'nonribosomal peptide biosynthetic process ; GO:0019184'. SYNONYMS - siderochrome biosynthesis // UNIQUE-ID - GO:0009108 TYPES - GO:0006732 TYPES - GO:0051188 COMMON-NAME - coenzyme biosynthetic process // UNIQUE-ID - GO:0009396 TYPES - GO:0006760 TYPES - GO:0009108 COMMON-NAME - folic acid and derivative biosynthetic process SYNONYMS - folate and derivative biosynthesis SYNONYMS - folic acid and derivative anabolism SYNONYMS - folic acid and derivative formation SYNONYMS - folic acid and derivative synthesis SYNONYMS - vitamin B9 and derivative biosynthesis SYNONYMS - vitamin M and derivative biosynthesis // UNIQUE-ID - GO:0045426 TYPES - GO:0009108 TYPES - GO:0042375 COMMON-NAME - quinone cofactor biosynthetic process // UNIQUE-ID - GO:0006744 TYPES - GO:0006743 TYPES - GO:0045426 COMMON-NAME - ubiquinone biosynthetic process // UNIQUE-ID - GO:0046473 TYPES - GO:0006650 TYPES - GO:0019752 COMMON-NAME - phosphatidic acid metabolic process // UNIQUE-ID - GO:0006073 TYPES - GO:0044042 TYPES - GO:0044264 COMMON-NAME - cellular glucan metabolic process // UNIQUE-ID - GO:0046375 TYPES - GO:0044264 COMMON-NAME - K antigen metabolic process // UNIQUE-ID - GO:0046377 TYPES - GO:0044264 COMMON-NAME - colanic acid metabolic process // UNIQUE-ID - GO:0046378 TYPES - GO:0044264 COMMON-NAME - enterobacterial common antigen metabolic process // UNIQUE-ID - GO:0046402 TYPES - GO:0044264 COMMON-NAME - O antigen metabolic process // UNIQUE-ID - GO:0006457 TYPES - GO:0044267 COMMON-NAME - protein folding SYNONYMS - chaperone activity // UNIQUE-ID - GO:0043687 TYPES - GO:0006464 COMMON-NAME - post-translational protein modification SYNONYMS - post-translational amino acid modification SYNONYMS - post-translational modification SYNONYMS - posttranslational amino acid modification SYNONYMS - posttranslational modification SYNONYMS - posttranslational protein modification SYNONYMS - PTM // UNIQUE-ID - GO:0016485 TYPES - GO:0051604 COMMON-NAME - protein processing // UNIQUE-ID - GO:0019752 TYPES - GO:0043436 COMMON-NAME - carboxylic acid metabolic process // UNIQUE-ID - GO:0009106 TYPES - GO:0000273 COMMON-NAME - lipoate metabolic process // UNIQUE-ID - GO:0019395 TYPES - GO:0006631 TYPES - GO:0034440 COMMON-NAME - fatty acid oxidation // UNIQUE-ID - GO:0046459 TYPES - GO:0006631 COMMON-NAME - short-chain fatty acid metabolic process SYNONYMS - short-chain fatty acid metabolism // UNIQUE-ID - GO:0045333 TYPES - GO:0015980 COMMON-NAME - cellular respiration SYNONYMS - oxidative metabolism SYNONYMS - respiration // UNIQUE-ID - GO:0042726 TYPES - GO:0006767 COMMON-NAME - riboflavin and derivative metabolic process SYNONYMS - vitamin B2 and derivative metabolism // UNIQUE-ID - GO:0008614 TYPES - GO:0042816 COMMON-NAME - pyridoxine metabolic process SYNONYMS - vitamin B6 metabolism // UNIQUE-ID - GO:0006664 TYPES - GO:0006643 COMMON-NAME - glycolipid metabolic process SYNONYMS - glycolipid metabolism // UNIQUE-ID - GO:0034440 TYPES - GO:0030258 COMMON-NAME - lipid oxidation // UNIQUE-ID - GO:0006084 TYPES - GO:0006732 COMMON-NAME - acetyl-CoA metabolic process SYNONYMS - acetyl coenzyme A metabolism // UNIQUE-ID - GO:0006733 TYPES - GO:0006732 COMMON-NAME - oxidoreduction coenzyme metabolic process // UNIQUE-ID - GO:0006752 TYPES - GO:0006732 COMMON-NAME - group transfer coenzyme metabolic process // UNIQUE-ID - GO:0046401 TYPES - GO:0009311 COMMON-NAME - lipopolysaccharide core region metabolic process // UNIQUE-ID - GO:0017004 TYPES - GO:0043623 COMMON-NAME - cytochrome complex assembly SYNONYMS - cytochrome biogenesis // UNIQUE-ID - GO:0015674 TYPES - GO:0006812 COMMON-NAME - di-, tri-valent inorganic cation transport // UNIQUE-ID - GO:0030001 TYPES - GO:0006812 COMMON-NAME - metal ion transport SYNONYMS - heavy metal ion transport // UNIQUE-ID - GO:0015698 TYPES - GO:0006820 COMMON-NAME - inorganic anion transport // UNIQUE-ID - GO:0010556 TYPES - GO:0009889 TYPES - GO:0060255 COMMON-NAME - regulation of macromolecule biosynthetic process // UNIQUE-ID - GO:0031326 TYPES - GO:0009889 TYPES - GO:0031323 COMMON-NAME - regulation of cellular biosynthetic process SYNONYMS - regulation of cellular anabolism SYNONYMS - regulation of cellular formation SYNONYMS - regulation of cellular synthesis // UNIQUE-ID - GO:0019219 TYPES - GO:0031323 TYPES - GO:0051171 TYPES - GO:0080090 COMMON-NAME - regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process // UNIQUE-ID - GO:0051252 TYPES - GO:0019219 TYPES - GO:0060255 COMMON-NAME - regulation of RNA metabolic process SYNONYMS - regulation of RNA metabolism // UNIQUE-ID - GO:0010468 TYPES - GO:0060255 COMMON-NAME - regulation of gene expression // UNIQUE-ID - S-adenosyl-L-methionine-cycle TYPES - METHIONINE-SYN COMMON-NAME - S-adenosyl-L-methionine cycle COMMENT - This class holds pathways that describe the S-adenosyl-L-methionine cycle // UNIQUE-ID - Citrulline-Biosynthesis TYPES - Other-Amino-Acid-Biosynthesis // UNIQUE-ID - Sorbitol-Biosynthesis TYPES - Sugar-Alcohols-Biosynthesis COMMON-NAME - Sorbitol Biosynthesis COMMENT - This class hold pathways for the biosynthesis of sorbitol // UNIQUE-ID - CMP-N-Acetylneuraminate-Biosynthesis TYPES - SUGAR-NUCLEOTIDES COMMON-NAME - CMP-N-acetylneuraminate biosynthesis COMMENT - This class holds pathways for biosynthesis of the CMP derivative of N-acetylneuraminate, a sialic acid. Sialic acids are acidic sugars present in oligosaccharide chains of many glycoconjugates. // UNIQUE-ID - GDP-Mannose-Biosynthesis TYPES - SUGAR-NUCLEOTIDES COMMON-NAME - GDP Mannose Biosynthesis COMMENT - This class holds pathways for the biosynthesis of GDP-mannose // UNIQUE-ID - Rhamnose-Biosynthesis TYPES - SUGAR-NUCLEOTIDES COMMON-NAME - Rhamnose Biosynthesis COMMENT - This class holds pathways for the biosynthesis of L-and D-rhamnose and their /derivatives. // UNIQUE-ID - Chlorophyll-a-Biosynthesis TYPES - Chlorophyll-Biosynthesis COMMON-NAME - Chlorophyll a-Biosynthesis COMMENT - This class holds pathway for the biosynthesis of chlorophyll a // UNIQUE-ID - Chlorophyllide-a-Biosynthesis TYPES - Chlorophyll-Biosynthesis COMMON-NAME - Chlorophyllide a Biosynthesis COMMENT - This class holds pathways for the biosynthesis of chlorophyllide a // UNIQUE-ID - Adenosylcobalamin-Biosynthesis TYPES - Cobalamin-Biosynthesis COMMON-NAME - Adenosylcobalamin Biosynthesis COMMENT - This class holds pathways for the biosynthesis of adenosylcobalamin, also known as vitamin B12 // UNIQUE-ID - Abscisic-Acid-Derivative-Biosynthesis TYPES - Abscisic-Acid-Biosynthesis COMMON-NAME - Abscisic acid derivative Biosynthesis // UNIQUE-ID - Conjugated-Fatty-Acid-Biosynthesis TYPES - Unusual-fatty-acid-biosynthesis COMMON-NAME - Conjugated Fatty Acid Biosynthesis COMMENT - Conjugated fatty acids are those containing conjugated or non-methylene-interrupted double bonds. Seed oils of a limited number of plant species are enriched in such fatty acids. // UNIQUE-ID - Cyclopropane-fatty-acid-biosyn TYPES - Unusual-fatty-acid-biosynthesis COMMON-NAME - Cyclopropane Fatty Acids Biosynthesis // UNIQUE-ID - BETALAIN-ALKALOIDS TYPES - ALKALOIDS-SYN COMMON-NAME - Betalaine alkaloids COMMENT - Betalain alkaloids are derived biosynthetically from the amino acid 3,4-dihydroxyphenylalanine (DOPA) via the intermediate betalamic acid representing the common chromphore of betalains. The water soluble betalain alkaloids split up into two major groups, the betacyanins and betaxanthins. Betacyanins, for instance amaranthin and betaxanthins such as indicaxanthin are often found in fruits, flowers and leaves of higher plants. Betalaines replace other biological important plant pigments such as anthocyanine in most of the plant families of the order Centrospermae. // UNIQUE-ID - INDOLE-ALKALOIDS TYPES - ALKALOIDS-SYN COMMON-NAME - Indole alkaloids COMMENT - The majority of indole alkaloids are derived biosynthetically from the amino acid tryptophan and the monoterpenoid precursor secologanin. Condensation of these two classes produces a wide range of complex skeletons in this division. Indole alkaloids such as vindoline occur extensively in the plant families Apocynacea, borreline in the Rubiacea and strychnine in the Loganiacea but are also present in a smaller number and variety in other angiosperm families. Many indole alkaloids are useful drugs possessing clinical values such as the tranquillizer reserpine or the ergot alkaloids employed for their relaxing and migraine relieving properties. // UNIQUE-ID - ISOQUINOLINE-ALKALOIDS TYPES - ALKALOIDS-SYN COMMON-NAME - Isoquinoline and Benzylisoquinoline alkaloids COMMENT - Isoquinoline alkaloids constitute the group of the most abundant alkaloids in the COMMENT - plant kingdom. Isoquinolines are derived biosynthetically from the amino acid tyrosine COMMENT - generating the fundamental intermediate 3,4-dihydroxyphenylethylamine (dopamine) COMMENT - and carbonyl units of different origin. The carbonyl donor unit is an α-ketoacid COMMENT - for isoquinoline and an aldehyde, i.e. 4-hydroxyphenylacetaldehyde in the case of COMMENT - benzylisoquinoline alkaloids. Some representatives of isoquinoline and COMMENT - benzylisoquinoline alkaloids such as berberine are widely distributed in the plant COMMENT - kingdom. Others are more restricted to certain plant families such as pellotine in COMMENT - the Cactaceae, cularine in the Fumariacea and morphine in the COMMENT - Papaveraceae. Morphine is still the most used painkiller in medicine. Other COMMENT - isoquinoline flavonoids such as codeine or papaverine are also considered COMMENT - useful medicinal drugs. // UNIQUE-ID - PEPTIDE-ALKALOIDS TYPES - ALKALOIDS-SYN COMMON-NAME - Peptide alkaloids COMMENT - Peptide alkaloids are derived biosynthetically from a varying number of peptide-bounded and subsequently cyclized amino acids. A discrete structural feature is the almost common occurrence of an aromatic styrylamide group formed from the amino acid phenylalanine. Peptide alkaloids such as zizyphine are mostly found in the plant family Rhamnaceae but are also present in a few other plant families and in fungi, for instance α-amanithin the toxic principle in the death cap mushroom (Amanita phalloides). // UNIQUE-ID - POLYKETIDE-ALKALOIDS TYPES - ALKALOIDS-SYN COMMON-NAME - Polyketide alkaloids COMMENT - A smaller number of alkaloids that are derived from a polyketide pathway are combined under the subclass of polyketide alkaloids. Polyketide alkaloids, for instance pinidine are found in plant families such as the Pinaceae and γ-coniceine in the Apiacea where alkaloids are known to be rather uncommon. // UNIQUE-ID - PURINE-ALKALOIDS TYPES - ALKALOIDS-SYN COMMON-NAME - Purine alkaloids COMMENT - Purine alkaloids are biosynthetically derived from xanthosine. Purine alkaloids contain e.g. N-alkyl derivatives such as caffeine, theophylline and theobromine that have been widely used due to their pharmacological properties. Many of the purine alkaloids such as trans-zeatin being found in a number of plant families exhibit phytohormonal activity as cytokinins. // UNIQUE-ID - PYRROLIDINE-ALKALOIDS TYPES - ALKALOIDS-SYN COMMON-NAME - Pyrrolidine, Piperidine and Pyridine alkaloids COMMENT - This subclass constitutes plant alkaloids which originate from solitary nitrogen containing 5-membered ring (pyrrolidines), 6-membered ring (piperidines) or aromatic 6-membered ring (pyridine) systems. They are biosynthetically derived from ornithine (pyrrolidine), lysine (piperidine) and nicotinic acid (via tryptophan) in the case of pyridine alkaloids. Pyrrolidine alkaloids such as stachyhydrine are widespread in plants with no obvious restriction to monocots or dicots. Piperidine alkaloids, for instance piperine are often found in plant families such as Piperaceae or coniine in the Apiacea. Pyridine alkaloids such as nicotine are again more widely distributed and often associated with other alkaloids of the pyrrolidine and piperidine type. Some members of this subclass are biological active, acting as inhibitors for sugar-hydrolyzing enzymes, others have been utilized because of their pharmaceutical potential in the treatment of the human disease AIDS. // UNIQUE-ID - PYRROLIZIDINE-ALKALOIDS TYPES - ALKALOIDS-SYN COMMON-NAME - Pyrrolizidine alkaloids COMMENT - The group of pyrolizidine contains some of the most poisonous plant alkaloids. Pyrrolizidine alkaloids are biosynthetically derived from the amino acid ornithine via the amines putrescine and homospermidine. The skeleton of pyrrolizidine is composed of fused two 5-membered rings connected through a nitrogen bridge which are often esterified with amino alcohols (necines). Pyrrolizidine alkaloids such as senecionine occur mostly in the Compositae family especially in the genus Senecio. // UNIQUE-ID - QUINOLINE-ALKALOIDS TYPES - ALKALOIDS-SYN COMMON-NAME - Quinoline alkaloids COMMENT - The biosynthetic origin of quinoline alkaloids is the aromatic amine anthranilic (2-aminobenzoic) acid involved in the metabolism of the amino acid tryptophan. The skeleton of quinoline alkaloids constitutes a bicyclic system with a fused benzene and pyridine ring. The attachment of a furan ring to the pyridine nucleus generates furoquinolines (e.g. furacridone), an important subgroup of quinoline alkaloids. The plant family Rutaceae represents the major source of quinoline alkaloids, e.g. maculine. Quinoline alkaloide are known to possess pharmaceutical activites but only a few such as quinine are used in medicine because of their antimalarial properties. // UNIQUE-ID - QUINOLIZIDINE-ALKALOIDS TYPES - ALKALOIDS-SYN COMMON-NAME - Quinolizidine alkaloids COMMENT - Quinolizidine alkaloids are derived biosynthetically from the amino acid lysine. The skeleton of quinolizidine is composed of fused two 6-membered rings connected through a nitrogen bridge. Quinolizidine alkaloids such as lupinin are mostly restricted to the plant family Fabaceae and are found especially in the genus Lupinus which is why they are often referred to as lupin alkaloids. The value of quinolizidine alkaloids for plants is connected to their anti-herbivory properties but a few also have also been used in medicine such as retamine (hypotensive activity). // UNIQUE-ID - TROPANE-ALKALOIDS TYPES - ALKALOIDS-SYN COMMON-NAME - Tropane alkaloids COMMENT - Tropane alkaloids are derived biosynthetically from the amino acid ornithine. Some tropane alkaloids such as atropine and hyoscyamine also recruit parts of their structure (tropanic acid moiety) from phenylalanine. Tropane alkaloids such as tropine occur primarily in the plant families Solanaceae and cocaine in the family Erythroxylaceae. Many members of the tropane alkaloid group have been exploited for their useful medicinal properties but are also considered to be highly addictive. // UNIQUE-ID - CYANOGENIC-GLUCOSIDE-SYN TYPES - N-CONTAINING-GLUCOSIDE-SYN COMMON-NAME - Cyanogenic glucosides COMMENT - This class contains biosynthetic pathways of defense compounds cyanogenic glucosides. Cyanogenic glucosides are derivatives of 2-hydroxynitriles. They are stored in the central vacuole as glucosides, often with beta-D-glucose. Upon activation toxic hydrogen cyanide are released. // UNIQUE-ID - GLUCOSINOLATE-SYN TYPES - N-CONTAINING-GLUCOSIDE-SYN COMMON-NAME - Glucosinolates COMMENT - This class contains biosynthetic pathways of glucosinolates. Glucosinolates are derivatives of amino acids. In addition to nitrogen, they also contain sulfur. When hydrolyzed, glucosinolates release isothiocyanate, responsible for the odor of mustard and horseradish. Glucosinolates are mainly found in the order Capparales which include the model plant Arabidopsis. // UNIQUE-ID - Salicylate-Biosynthesis TYPES - BENZENOID-SYN COMMON-NAME - Salicylate Biosynthesis COMMENT - This class holds pathways for the biosynthesis of salicylate. // UNIQUE-ID - ELLAGITANNINS TYPES - TANNIN-SYN COMMON-NAME - Ellagitannins Biosynthesis // UNIQUE-ID - GALLOTANNINS TYPES - TANNIN-SYN COMMON-NAME - Gallotannins Biosynthesis // UNIQUE-ID - Phytate-Biosynthesis TYPES - Cyclitols-Biosynthesis COMMON-NAME - Phytate Biosynthesis COMMENT - This class holds pathways for the biosynthesis of phytate (1D-myo-Inositol 1,2,3,4,5,6-hexakisphosphate) SYNONYMS - 1D-myo-Inositol 1,2,3,4,5,6-hexakisphosphate Biosynthesis // UNIQUE-ID - Phytyl-Diphosphate-Biosynthesis TYPES - DITERPENOID-SYN COMMON-NAME - Phytyl Diphosphate Biosynthesis COMMENT - This class holds pathways for the biosynthesis of phytyl diphosphate. // UNIQUE-ID - Resin-Acids-Biosynthesis TYPES - DITERPENOID-SYN COMMON-NAME - Resin Acids Biosynthesis // UNIQUE-ID - APOCAROTENOID-SYN TYPES - TETRATERPENOID-SYN COMMON-NAME - Apocarotenoids Biosynthesis COMMENT - Apocarotenoids are a class of natural products derived from the oxidative cleavage of carotenoids (tetraterpenoids). Some apocarotenoids have agronomic value as pigments and flavor/aroma components in a variety of foods. // UNIQUE-ID - CAROTENOID-SYN TYPES - TETRATERPENOID-SYN COMMON-NAME - Carotenoids Biosynthesis // UNIQUE-ID - 3-Chlorobenzoate-Degradation TYPES - Chlorobenzoate-Degradation COMMON-NAME - 3-Chlorobenzoate Degradation COMMENT - This class holds pathways for the degradation of 3-chlorobenzoate // UNIQUE-ID - 3-Chlorocatechol-Degradation TYPES - Chlorocatechol-Degradation COMMON-NAME - 3-Chlorocatechol Degradation COMMENT - This class holds pathways for the degradation of 3-chlorocatechol. // UNIQUE-ID - 3-Chlorotoluene-Degradation TYPES - Chlorotoluene-Degradation COMMON-NAME - 3 Chlorotoluene Degradation COMMENT - This class holds pathways for the degradation of 3-chlorotoluene // UNIQUE-ID - Dichlorotoluene-Degradation TYPES - Chlorotoluene-Degradation COMMON-NAME - Dichlorotoluene Degradation COMMENT - This class holds pathways for the degradationn of dichlorotoluenes. // UNIQUE-ID - 4-Nitrotoluene-Degradation TYPES - Nitro-Toluene-Degradation COMMON-NAME - 4-Nitrotoluene Degradation COMMENT - This class holds pathways for the degradation of 4-nitroroluene // UNIQUE-ID - 2-Nirobenzoate-Degradation TYPES - Nitrobenzoate-Degradation COMMON-NAME - 2-Nitrobenzoate Degradation COMMENT - This class holds pathways for the degradation of 2-nitrobenzoate // UNIQUE-ID - o-Nitrophenol-Degradation TYPES - Nitrophenol-Degradation COMMON-NAME - 2-Nitrophenol Degradation COMMENT - This class holds pathways for the degradation of the aromatic compound o-nitrophenol SYNONYMS - o-Nitrophenol Degradation // UNIQUE-ID - p-Nitrophenol-Degradation TYPES - Nitrophenol-Degradation COMMON-NAME - 4-Nitrophenol Degradation COMMENT - This class holds pathways for the degradation of the aromatic compound p-nitrophenol SYNONYMS - p-Nitrophenol Degradation // UNIQUE-ID - Reductive-TCA-Cycles TYPES - Autotrophic-CO2-Fixation COMMON-NAME - Reductive TCA Cycles COMMENT - This class holds pathways which are variants of reductive TCA cycles. // UNIQUE-ID - CYANOGENIC-GLUCOSIDE-DEG TYPES - N-CONTAINING-GLUCOSIDE-DEG COMMON-NAME - Cyanogenic Glucosides Degradation COMMENT - This class contains catabolic pathways of defense compounds cyanogenic glucosides. Cyanogenic glucosides are derivatives of 2-hydroxynitriles. They are stored in the central vacuole as glucosides, often with beta-D-glucose. Upon activation toxic hydrogen cyanide are released. // UNIQUE-ID - GLUCOSINOLATE-DEG TYPES - N-CONTAINING-GLUCOSIDE-DEG COMMON-NAME - Glucosinolates Degradation COMMENT - This class contains catabolic pathways of glucosinolates. Glucosinolates are derivatives of amino acids. In addition to nitrogen, they also contain sulfur. When hydrolyzed, glucosinolates release isothiocyanate, responsible for the odor of mustard and horseradish. Glucosinolates are mainly found in the order Capparales which include the model plant Arabidopsis. // UNIQUE-ID - Phytate-Degradation TYPES - CYCLITOLS-DEG COMMON-NAME - Phytate Degradation COMMENT - This class holds pathways for phytate degradation // UNIQUE-ID - Carotenoid-Degradation TYPES - Tetraterpenoid-Degradation COMMON-NAME - Carotenoids Degradation // UNIQUE-ID - Transcription-Factor-Binding-Reactions TYPES - Protein-DNA-Binding-Reactions COMMENT - Reactions in which a transcription factor binds to a DNA binding-site. // UNIQUE-ID - Electron-Transfer-Reactions TYPES - Composite-Reactions COMMENT - Electron transfer reactions (ETRs) describe reactions that transfer /electrons between substrates, which are thus involved in redox /processes that oxidize and reduce some of the substrates. ETRs /usually take place at membranes, because a key purpose of ETRs is to /use the electron energy to build up a proton gradient across the /membrane, which can then be used for energy generation by the cell, /using ATP synthesis driven by the proton gradient. ETRs very often /involve the pool of membrane-bound quinone substrates, which can /shuttle electrons to or from an ETR. / /All ETRs are composite reactions, because they involve at least two /redox half reactions. These half reactions involve explicit /electrons, which cannot occur freely. Thus, the half reactions have to /be paired up, with the result that the electrons are used only /internally to connect the half reactions, and are not visible /as substrates of the ETR. / /Sometimes, a proton transport reaction can also be a sub-reaction of /the ETR, to represent so-called vectoral proton movement. In the /vectoral case, protons are actively pumped across the membrane, using /energy extracted from the redox processes. The proton transport /reaction is not directly connected to the redox half reactions in the /pathway representation of the composite reaction. / /Because ETRs tend to occur at membranes, substrates that are not in /the default compartment (the cytoplasm) need to have compartment /information associated by means of value annotations. The exception /to this are the membrane-bound quinone substrates, which are always /assumed to reside in the membrane itself. // UNIQUE-ID - EC-1 TYPES - EC-Reactions COMMON-NAME - 1 -- Oxidoreductases // UNIQUE-ID - EC-2 TYPES - EC-Reactions COMMON-NAME - 2 -- Transferases // UNIQUE-ID - EC-3 TYPES - EC-Reactions COMMON-NAME - 3 -- Hydrolases // UNIQUE-ID - EC-4 TYPES - EC-Reactions COMMON-NAME - 4 -- Lyases // UNIQUE-ID - EC-5 TYPES - EC-Reactions COMMON-NAME - 5 -- Isomerases // UNIQUE-ID - EC-6 TYPES - EC-Reactions COMMON-NAME - 6 -- Ligases // UNIQUE-ID - DNA-REPAIR TYPES - DNA-Reactions COMMENT - Reactions involved in the repair of DNA // UNIQUE-ID - tRNA-Reactions TYPES - RNA-Reactions COMMENT - Reactions in which at least one substrate is a tRNA or a modified tRNA. // UNIQUE-ID - TAX-131221 TYPES - TAX-35493 COMMON-NAME - Streptophytina SYNONYMS - charophyte/embryophyte group SYNONYMS - Charophyta/Embryophyta group // UNIQUE-ID - TAX-6072 TYPES - TAX-33208 COMMON-NAME - Eumetazoa // UNIQUE-ID - BC-1.1 TYPES - BC-1 COMMON-NAME - carbon utilization // UNIQUE-ID - BC-1.2 TYPES - BC-1 COMMON-NAME - degradation of macromolecules // UNIQUE-ID - BC-1.3 TYPES - BC-1 COMMON-NAME - energy metabolism, carbon // UNIQUE-ID - BC-1.4 TYPES - BC-1 COMMON-NAME - energy production/transport // UNIQUE-ID - BC-1.5 TYPES - BC-1 COMMON-NAME - biosynthesis of building blocks // UNIQUE-ID - BC-1.6 TYPES - BC-1 COMMON-NAME - biosynthesis of macromolecules (cellular constituents) COMMENT - The cell structure category contains both genes encoding components of the structure and genes encoding products involved in the biosynthesis of the structure. // UNIQUE-ID - BC-1.7 TYPES - BC-1 COMMON-NAME - central intermediary metabolism // UNIQUE-ID - BC-1.8 TYPES - BC-1 COMMON-NAME - metabolism of other compounds // UNIQUE-ID - BC-2.1 TYPES - BC-2 COMMON-NAME - DNA related // UNIQUE-ID - BC-2.2 TYPES - BC-2 COMMON-NAME - RNA related // UNIQUE-ID - BC-2.3 TYPES - BC-2 COMMON-NAME - protein related // UNIQUE-ID - BC-3.1 TYPES - BC-3 COMMON-NAME - type of regulation // UNIQUE-ID - BC-3.3 TYPES - BC-3 COMMON-NAME - genetic unit regulated // UNIQUE-ID - BC-3.4 TYPES - BC-3 COMMON-NAME - trigger (some information added) COMMENT - The terms trigger (3.4) and modulator (3.5) were meant to specify specific compounds/proteins either triggering a response or modulating a response. Ie for lacI, lactose is the trigger and CRP a modulator of the regulation. The activator or repressor would be specified by 3.1.2.2 or 3.1.2.3 respectively. // UNIQUE-ID - BC-3.5 TYPES - BC-3 COMMON-NAME - trigger modulation (some information added) COMMENT - The terms trigger (3.4) and modulator (3.5) were meant to specify specific compounds/proteins either triggering a response or modulating a response. Ie for lacI, lactose is the trigger and CRP a modulator of the regulation. The activator or repressor would be specified by 3.1.2.2 or 3.1.2.3 respectively. // UNIQUE-ID - BC-4.1 TYPES - BC-4 COMMON-NAME - Channel-type Transporters // UNIQUE-ID - BC-4.2 TYPES - BC-4 COMMON-NAME - Electrochemical potential driven transporters // UNIQUE-ID - BC-4.3 TYPES - BC-4 COMMON-NAME - Primary Active Transporters // UNIQUE-ID - BC-4.4 TYPES - BC-4 COMMON-NAME - Group Translocators // UNIQUE-ID - BC-4.8.A TYPES - BC-4 COMMON-NAME - Accessory Factors Involved in Transport // UNIQUE-ID - BC-4.9.A TYPES - BC-4 COMMON-NAME - Transporters of Unknown Classification // UNIQUE-ID - BC-4.9.B TYPES - BC-4 COMMON-NAME - Putative uncharacterized transport protein // UNIQUE-ID - BC-4.S TYPES - BC-4 COMMON-NAME - substrate // UNIQUE-ID - BC-5.1 TYPES - BC-5 COMMON-NAME - cell division // UNIQUE-ID - BC-5.10 TYPES - BC-5 COMMON-NAME - defense/survival COMMENT - The adaptation to stress was meant to cover the classical stress inducers such as osmotic pressure, temperature, starvation. /The protection category was meant to cover those related to compound / chemical induced killing or stress. /The defense/survival category was meant to cover virulence factors (although K-12 does not have many). // UNIQUE-ID - BC-5.11 TYPES - BC-5 COMMON-NAME - DNA uptake // UNIQUE-ID - BC-5.2 TYPES - BC-5 COMMON-NAME - cell cycle physiology // UNIQUE-ID - BC-5.3 TYPES - BC-5 COMMON-NAME - motility, chemotaxis, energytaxis (aerotaxis, redoxtaxis etc) // UNIQUE-ID - BC-5.4 TYPES - BC-5 COMMON-NAME - genetic exchange, recombination (for future) // UNIQUE-ID - BC-5.5 TYPES - BC-5 COMMON-NAME - adaptations COMMENT - The adaptation to stress was meant to cover the classical stress inducers such as osmotic pressure, temperature, starvation. /The protection category was meant to cover those related to compound / chemical induced killing or stress. /The defense/survival category was meant to cover virulence factors (although K-12 does not have many). // UNIQUE-ID - BC-5.6 TYPES - BC-5 COMMON-NAME - protection COMMENT - The adaptation to stress was meant to cover the classical stress inducers such as osmotic pressure, temperature, starvation. /The protection category was meant to cover those related to compound / chemical induced killing or stress. /The defense/survival category was meant to cover virulence factors (although K-12 does not have many). // UNIQUE-ID - BC-5.8 TYPES - BC-5 COMMON-NAME - SOS response // UNIQUE-ID - BC-6.1 TYPES - BC-6 COMMON-NAME - membrane // UNIQUE-ID - BC-6.2 TYPES - BC-6 COMMON-NAME - murein // UNIQUE-ID - BC-6.3 TYPES - BC-6 COMMON-NAME - surface antigens (ECA, O antigen of LPS) // UNIQUE-ID - BC-6.4 TYPES - BC-6 COMMON-NAME - flagella // UNIQUE-ID - BC-6.5 TYPES - BC-6 COMMON-NAME - pilus // UNIQUE-ID - BC-6.6 TYPES - BC-6 COMMON-NAME - ribosomes // UNIQUE-ID - BC-6.7 TYPES - BC-6 COMMON-NAME - capsule (M and K antigens) // UNIQUE-ID - BC-7.1 TYPES - BC-7 COMMON-NAME - cytoplasm // UNIQUE-ID - BC-7.2 TYPES - BC-7 COMMON-NAME - periplasm // UNIQUE-ID - BC-7.3 TYPES - BC-7 COMMON-NAME - inner membrane // UNIQUE-ID - BC-7.4 TYPES - BC-7 COMMON-NAME - outer membrane // UNIQUE-ID - BC-7.5 TYPES - BC-7 COMMON-NAME - extracellular // UNIQUE-ID - BC-8.1 TYPES - BC-8 COMMON-NAME - prophage genes and phage related functions // UNIQUE-ID - BC-8.2 TYPES - BC-8 COMMON-NAME - plasmid related // UNIQUE-ID - BC-8.3 TYPES - BC-8 COMMON-NAME - transposon related // UNIQUE-ID - BC-8.4 TYPES - BC-8 COMMON-NAME - colicin related // UNIQUE-ID - CPD-187 TYPES - 2-Oxo-carboxylates COMMON-NAME - 4-hydroxy-4-methyl-2-oxoglutarate SYNONYMS - 4-hydroxy-4-carboxy-2-oxovalerate SYNONYMS - 4-hydroxy-4-methyl-2-ketoglutarate // UNIQUE-ID - CPD-10071 TYPES - 6-H-5-I-2-methylhexanoates COMMON-NAME - (5R)-6-hydroxy-5-isopropenyl-2-methylhexanoate // UNIQUE-ID - CPD-10072 TYPES - 6-H-5-I-2-methylhexanoates COMMON-NAME - (5S)-6-hydroxy-5-isopropenyl-2-methylhexanoate // UNIQUE-ID - 2R-HYDROPEROXY-FATTY-ACIDS TYPES - Fatty-Acids COMMON-NAME - a 2(R)-hydroperoxy fatty acid COMMENT - This class of compounds, found as intermediates of fatty acid alpha-oxidation, is chemically unstable. The compounds are quickly turned over to alpha-oxidation products.|CITS: [10455113]| // UNIQUE-ID - 2R-HYDROXY-FATTY-ACIDS TYPES - Fatty-Acids COMMON-NAME - a 2(R)-hydroxy fatty acid // UNIQUE-ID - CPD-8190 TYPES - Fatty-Acids COMMON-NAME - a phospholipid methylene fatty acid // UNIQUE-ID - Long-Chain-Fatty-Acids TYPES - Fatty-Acids COMMON-NAME - a long-chain fatty acid SYNONYMS - Long-Chain-Fatty-Acids // UNIQUE-ID - Medium-chain-fatty-acids TYPES - Fatty-Acids COMMON-NAME - a medium chain fatty acid // UNIQUE-ID - OMEGA-ALDEHYDE-FATTY-ACID TYPES - Fatty-Acids COMMON-NAME - a ω-oxo fatty acid // UNIQUE-ID - OMEGA-HYDROXY-FATTY-ACID TYPES - Fatty-Acids COMMON-NAME - a ω-hydroxy fatty acid // UNIQUE-ID - Phospholipid-Cyclopropane-Fatty-Acids TYPES - Fatty-Acids COMMON-NAME - a phospholipid cyclopropane fatty acid // UNIQUE-ID - Phospholipid-Olefinic-Fatty-Acids TYPES - Fatty-Acids COMMON-NAME - a phospholipid olefinic fatty acid // UNIQUE-ID - Short-chain-fatty-acids TYPES - Fatty-Acids COMMON-NAME - a short chain fatty acid // UNIQUE-ID - Very-long-chain-fatty-acids TYPES - Fatty-Acids COMMON-NAME - a very long chain fatty acid // UNIQUE-ID - 2-Hydroxy-carboxylates TYPES - Hydroxy-carboxylates COMMON-NAME - a 2-hydroxy carboxylate // UNIQUE-ID - 11-13-Eicosadienoates TYPES - Long-Chain-Carboxylates COMMON-NAME - an 11,13-eicosadienoate COMMENT - The chemical formula for this long dienoic fatty acid is /C20H36O2 /and it has a molecular weight of 308.503 daltons, but there are 4 possible structures with different /cis and trans configuations within this class. / SYNONYMS - 11,13-eicosadienoic acid // UNIQUE-ID - RS-Malate TYPES - C4-dicarboxylates COMMON-NAME - (RS)-malate SYNONYMS - (RS)-malic acid SYNONYMS - DL-apple acid SYNONYMS - DL-malic acid SYNONYMS - hydroxysuccinic acid SYNONYMS - hydroxybutanedioic acid SYNONYMS - malic acid SYNONYMS - DL-malate SYNONYMS - malate // UNIQUE-ID - Myo-inositol-monophosphates TYPES - Inositol-Phosphates COMMON-NAME - a myo-inositol monophosphate SYNONYMS - an inositol monophosphate // UNIQUE-ID - Myo-inositol-polyphosphates TYPES - Inositol-Phosphates COMMON-NAME - a myo-inositol-polyphosphate // UNIQUE-ID - 1-PHOSPHATIDYL-1D-MYO-INOSITOL-34-BISPH TYPES - L-1-phosphatidyl-inositols COMMON-NAME - a 1-phosphatidyl-1D-myo-inositol 3,4-bisphosphate COMMENT - The phosphorylated derivatives of |FRAME: L-1-phosphatidyl-inositols "phosphatidylinositol"| (PtdIns), collectively called phosphoinositides (PIs), are eukaryotic cell membrane phospholipids whose inositol head group is phosphorylated at position D3, D4, or D5, singly or in all combinations, to yield seven PI metabolites. / / /The seven phosphoinositides found in animals include: / /Phosphatidylinositol monophosphates: |FRAME: CPD-177|, |FRAME: CPD-1108| and |FRAME: 1-PHOSPHATIDYL-1D-MYO-INOSITOL-5-PHOSPHA|. / /Phosphatidylinositol bisphophosphates: |FRAME: 1-PHOSPHATIDYL-1D-MYO-INOSITOL-34-BISPH|, |FRAME: 1-PHOSPHATIDYL-1D-MYO-INOSITOL-35-BISPH|, and |FRAME: PHOSPHATIDYL-MYO-INOSITOL-45-BISPHOSPHA|. / /Phosphatidylinositol trisphophosphate: |FRAME: PHOSPHATIDYLINOSITOL-345-TRIPHOSPHATE|. / /|FRAME: 1-PHOSPHATIDYL-1D-MYO-INOSITOL-34-BISPH "1-Phosphatidyl-1D-myo-inositol 3,4-bisphosphate"| is used in eukaryotic cells as a second messenger, involved in the regulation of cellular events including growth, differentiation, vesicular sorting, glucose transport and platelet aggregation |CITS:[9599410][11485317]|. /At the plasma membrane, |FRAME: 1-PHOSPHATIDYL-1D-MYO-INOSITOL-34-BISPH "phosphatidylinositol-3,4-bisphosphate"| binds the pleckstrin homology (PH) domain-containing proteins Akt and TAPP1 |CITS: [15716355]|. SYNONYMS - a 1-phosphatidyl-myo-inositol 3,4-bisphosphate // UNIQUE-ID - 1-PHOSPHATIDYL-1D-MYO-INOSITOL-5-PHOSPHA TYPES - L-1-phosphatidyl-inositols COMMON-NAME - a 1-phosphatidyl-1D-myo-inositol 5-phosphate COMMENT - The phosphorylated derivatives of |FRAME: L-1-phosphatidyl-inositols "phosphatidylinositol"| (PtdIns), collectively called phosphoinositides (PIs), are eukaryotic cell membrane phospholipids whose inositol head group is phosphorylated at position D3, D4, or D5, singly or in all combinations, to yield seven PI metabolites. / / /The seven phosphoinositides found in animals include: / /Phosphatidylinositol monophosphates: |FRAME: CPD-177|, |FRAME: CPD-1108| and |FRAME: 1-PHOSPHATIDYL-1D-MYO-INOSITOL-5-PHOSPHA|. / /Phosphatidylinositol bisphophosphates: |FRAME: 1-PHOSPHATIDYL-1D-MYO-INOSITOL-34-BISPH|, |FRAME: 1-PHOSPHATIDYL-1D-MYO-INOSITOL-35-BISPH|, and |FRAME: PHOSPHATIDYL-MYO-INOSITOL-45-BISPHOSPHA|. / /Phosphatidylinositol trisphophosphate: |FRAME: PHOSPHATIDYLINOSITOL-345-TRIPHOSPHATE|. / /About phosphatidylinositol 5-phosphate (PI5P): / /Several studies found changes in intracellular PI5P levels during cell cycle progression, as well as upon thrombin treatment and osmotic stress |CITS: [10854858][11463365][11716778]|. The plant homeodomain-containing ING2 protein, a candidate tumor suppressor, was shown to act as a nuclear PI5P receptor, a function that regulates its ability to activate p53 |CITS: [12859901]|. PI5P has also been tied to tumor suppression via its potential regulation of Akt. It was demonstrated that the loss of PI5P, via a conversion to |FRAME: PHOSPHATIDYL-MYO-INOSITOL-45-BISPHOSPHA|, resulted in a decrease in Akt activity |CITS: [12897244]|. In addition, PI5P was shown to enhance the activity of various myotubularin phosphatases (MTM1, MTMR3, and MTMR6) toward their preferred substrate |FRAME: 1-PHOSPHATIDYL-1D-MYO-INOSITOL-35-BISPH|, presumably through allosteric regulation |CITS: [12646134]|). Together these studies stress the importance of PI5P as a bona fide signaling molecule |CITS: [15247229]|. // UNIQUE-ID - CPD-1108 TYPES - L-1-phosphatidyl-inositols COMMON-NAME - a 1-phosphatidyl-1D-myo-inositol 4-phosphate COMMENT - The phosphorylated derivatives of |FRAME: L-1-phosphatidyl-inositols "phosphatidylinositol"| (PtdIns), collectively called phosphoinositides (PIs), are eukaryotic cell membrane phospholipids whose inositol head group is phosphorylated at position D3, D4, or D5, singly or in all combinations, to yield seven PI metabolites. / / /The seven phosphoinositides found in animals include: / /Phosphatidylinositol monophosphates: |FRAME: CPD-177|, |FRAME: CPD-1108| and |FRAME: 1-PHOSPHATIDYL-1D-MYO-INOSITOL-5-PHOSPHA|. / /Phosphatidylinositol bisphophosphates: |FRAME: 1-PHOSPHATIDYL-1D-MYO-INOSITOL-34-BISPH|, |FRAME: 1-PHOSPHATIDYL-1D-MYO-INOSITOL-35-BISPH|, and |FRAME: PHOSPHATIDYL-MYO-INOSITOL-45-BISPHOSPHA|. / /Phosphatidylinositol trisphophosphate: |FRAME: PHOSPHATIDYLINOSITOL-345-TRIPHOSPHATE|. SYNONYMS - phosphatidylinositol-4-phosphate // UNIQUE-ID - CPD-177 TYPES - L-1-phosphatidyl-inositols COMMON-NAME - a 1-phosphatidyl-1D-myo-inositol 3-phosphate COMMENT - The phosphorylated derivatives of |FRAME: L-1-phosphatidyl-inositols "phosphatidylinositol"| (PtdIns), collectively called phosphoinositides (PIs), are eukaryotic cell membrane phospholipids whose inositol head group is phosphorylated at position D3, D4, or D5, singly or in all combinations, to yield seven PI metabolites. / / /The seven phosphoinositides found in animals include: / /Phosphatidylinositol monophosphates: |FRAME: CPD-177|, |FRAME: CPD-1108| and |FRAME: 1-PHOSPHATIDYL-1D-MYO-INOSITOL-5-PHOSPHA|. / /Phosphatidylinositol bisphophosphates: |FRAME: 1-PHOSPHATIDYL-1D-MYO-INOSITOL-34-BISPH|, |FRAME: 1-PHOSPHATIDYL-1D-MYO-INOSITOL-35-BISPH|, and |FRAME: PHOSPHATIDYL-MYO-INOSITOL-45-BISPHOSPHA|. / /Phosphatidylinositol trisphophosphate: |FRAME: PHOSPHATIDYLINOSITOL-345-TRIPHOSPHATE|. // UNIQUE-ID - PHOSPHATIDYL-MYO-INOSITOL-45-BISPHOSPHA TYPES - L-1-phosphatidyl-inositols COMMON-NAME - a 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate COMMENT - The phosphorylated derivatives of |FRAME: L-1-phosphatidyl-inositols "phosphatidylinositol"| (PtdIns), collectively called phosphoinositides (PIs), are eukaryotic cell membrane phospholipids whose inositol head group is phosphorylated at position D3, D4, or D5, singly or in all combinations, to yield seven PI metabolites. / / /The seven phosphoinositides found in animals include: / /Phosphatidylinositol monophosphates: |FRAME: CPD-177|, |FRAME: CPD-1108| and |FRAME: 1-PHOSPHATIDYL-1D-MYO-INOSITOL-5-PHOSPHA|. / /Phosphatidylinositol bisphophosphates: |FRAME: 1-PHOSPHATIDYL-1D-MYO-INOSITOL-34-BISPH|, |FRAME: 1-PHOSPHATIDYL-1D-MYO-INOSITOL-35-BISPH|, and |FRAME: PHOSPHATIDYL-MYO-INOSITOL-45-BISPHOSPHA|. / /Phosphatidylinositol trisphophosphate: |FRAME: PHOSPHATIDYLINOSITOL-345-TRIPHOSPHATE|. / /|FRAME: PHOSPHATIDYL-MYO-INOSITOL-45-BISPHOSPHA| is present at the plasma membrane and is a key regulator of actin remodelling and endocytosis, in addition to its role as a precursor to second messengers |CITS: [18774718]|. /It recruits and/or regulates several proteins that are implicated in the first step of endocytosis, including the clathrin adaptor complex AP-2 and the large GTPase dynamin |CITS: [12119359]|. SYNONYMS - a phosphatidyl-myo-inositol 4,5-biphosphate SYNONYMS - PtdIns(4,5)P2 // UNIQUE-ID - Phosphatidylinositols-34-1 TYPES - L-1-phosphatidyl-inositols COMMON-NAME - phosphatidylinositol-34:1 COMMENT - In this group of Phosphatidylinositols, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 34, and the total number of double bonds in the two acyl groups adds up to 1. SYNONYMS - PI-34:1 SYNONYMS - PI34:1 // UNIQUE-ID - Phosphatidylinositols-34-2 TYPES - L-1-phosphatidyl-inositols COMMON-NAME - phosphatidylinositol-34:2 COMMENT - In this group of Phosphatidylinositols, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 34, and the total number of double bonds in the two acyl groups adds up to 2. SYNONYMS - PI-34:2 SYNONYMS - PI34:2 // UNIQUE-ID - Phosphatidylinositols-34-3 TYPES - L-1-phosphatidyl-inositols COMMON-NAME - phosphatidylinositol-34:3 COMMENT - In this group of Phosphatidylinositols, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 34, and the total number of double bonds in the two acyl groups adds up to 3. SYNONYMS - PI-34:3 SYNONYMS - PI34:3 // UNIQUE-ID - Phosphatidylinositols-34-4 TYPES - L-1-phosphatidyl-inositols COMMON-NAME - phosphatidylinositol-34:4 COMMENT - In this group of Phosphatidylinositols, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 34, and the total number of double bonds in the two acyl groups adds up to 4. SYNONYMS - PI-34:4 SYNONYMS - PI34:4 // UNIQUE-ID - Phosphatidylinositols-36-1 TYPES - L-1-phosphatidyl-inositols COMMON-NAME - phosphatidylinositol-36:1 COMMENT - In this group of Phosphatidylinositols, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 36, and the total number of double bonds in the two acyl groups adds up to 1. SYNONYMS - PI-36:1 SYNONYMS - PI36:1 // UNIQUE-ID - Phosphatidylinositols-36-2 TYPES - L-1-phosphatidyl-inositols COMMON-NAME - phosphatidylinositol-36:2 COMMENT - In this group of Phosphatidylinositols, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 36, and the total number of double bonds in the two acyl groups adds up to 2. SYNONYMS - PI-36:2 SYNONYMS - PI36:2 // UNIQUE-ID - Phosphatidylinositols-36-3 TYPES - L-1-phosphatidyl-inositols COMMON-NAME - phosphatidylinositol-36:3 COMMENT - In this group of Phosphatidylinositols, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 36, and the total number of double bonds in the two acyl groups adds up to 3. SYNONYMS - PI-36:3 SYNONYMS - PI36:3 // UNIQUE-ID - Phosphatidylinositols-36-4 TYPES - L-1-phosphatidyl-inositols COMMON-NAME - phosphatidylinositol-36:4 COMMENT - In this group of Phosphatidylinositols, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 36, and the total number of double bonds in the two acyl groups adds up to 4. SYNONYMS - PI-36:4 SYNONYMS - PI36:4 // UNIQUE-ID - Phosphatidylinositols-36-5 TYPES - L-1-phosphatidyl-inositols COMMON-NAME - phosphatidylinositol-36:5 COMMENT - In this group of Phosphatidylinositols, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 36, and the total number of double bonds in the two acyl groups adds up to 5. SYNONYMS - PI-36:5 SYNONYMS - PI36:5 // UNIQUE-ID - Phosphatidylinositols-36-6 TYPES - L-1-phosphatidyl-inositols COMMON-NAME - phosphatidylinositol-36:6 COMMENT - In this group of Phosphatidylinositols, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 36, and the total number of double bonds in the two acyl groups adds up to 6. SYNONYMS - PI-36:6 SYNONYMS - PI36:6 // UNIQUE-ID - Phosphoinositides TYPES - L-1-phosphatidyl-inositols COMMON-NAME - a phosphoinositide COMMENT - Phosphorylated forms of phosphatidylinositol are called phosphoinositides and play important roles in lipid signaling, cell signaling and membrane trafficking. The inositol ring can be phosphorylated by a variety of kinases on the three, four and five hydroxyl groups in seven different combinations. However, the two and six hydroxyl group is typically not phosphorylated due to steric hindrance. // UNIQUE-ID - N-Acetyl-2-Arylethylamines TYPES - N-Acetylarylalkylamines COMMON-NAME - an N-acetyl-2-arylethylamine // UNIQUE-ID - ALLO-THR TYPES - Non-standard-amino-acids COMMON-NAME - allothreonine SYNONYMS - DL-allothreonine SYNONYMS - allo-thr // UNIQUE-ID - L-Methionine-sulfoxides TYPES - Non-standard-amino-acids COMMON-NAME - L-methionine S-oxide SYNONYMS - L-methionine-S-sulfoxide SYNONYMS - L-methionine sulfoxide SYNONYMS - methionine sulfoxide // UNIQUE-ID - Lysine-or-DAP TYPES - Non-standard-amino-acids COMMON-NAME - an L-lysine or meso-2,6-diaminoheptanedioate // UNIQUE-ID - N-Methyl-L-Amino-Acids TYPES - Non-standard-amino-acids COMMON-NAME - a N-methyl-L-amino acid COMMENT - This compound class stands for generic and unspecified N-methylated amino acids. // UNIQUE-ID - Phosphoserines TYPES - Non-standard-amino-acids COMMON-NAME - L(or D)-O-phosphoserine // UNIQUE-ID - S-Substituted-L-Cysteines TYPES - Non-standard-amino-acids COMMON-NAME - an L-cysteine-S-conjugate SYNONYMS - a cysteine-S-conjugate SYNONYMS - an S-substituted-L-cysteine SYNONYMS - an L-cysteine conjugate // UNIQUE-ID - Phosphatidylserines-34-1 TYPES - L-1-PHOSPHATIDYL-SERINE COMMON-NAME - phosphatidylserine-34:1 COMMENT - In this group of Phosphatidylserines, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 34, and the total number of double bonds in the two acyl groups adds up to 1. SYNONYMS - PS-34:1 SYNONYMS - PS34:1 // UNIQUE-ID - Phosphatidylserines-34-2 TYPES - L-1-PHOSPHATIDYL-SERINE COMMON-NAME - phosphatidylserine-34:2 COMMENT - In this group of Phosphatidylserines, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 34, and the total number of double bonds in the two acyl groups adds up to 2. SYNONYMS - PS-34:2 SYNONYMS - PS34:2 // UNIQUE-ID - Phosphatidylserines-34-3 TYPES - L-1-PHOSPHATIDYL-SERINE COMMON-NAME - phosphatidylserine-34:3 COMMENT - In this group of Phosphatidylserines, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 34, and the total number of double bonds in the two acyl groups adds up to 3. SYNONYMS - PS-34:3 SYNONYMS - PS34:3 // UNIQUE-ID - Phosphatidylserines-34-4 TYPES - L-1-PHOSPHATIDYL-SERINE COMMON-NAME - phosphatidylserine-34:4 COMMENT - In this group of Phosphatidylserines, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 34, and the total number of double bonds in the two acyl groups adds up to 4. SYNONYMS - PS-34:4 SYNONYMS - PS34:4 // UNIQUE-ID - Phosphatidylserines-36-1 TYPES - L-1-PHOSPHATIDYL-SERINE COMMON-NAME - phosphatidylserine-36:1 COMMENT - In this group of Phosphatidylserines, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 36, and the total number of double bonds in the two acyl groups adds up to 1. SYNONYMS - PS-36:1 SYNONYMS - PS36:1 // UNIQUE-ID - Phosphatidylserines-36-2 TYPES - L-1-PHOSPHATIDYL-SERINE COMMON-NAME - phosphatidylserine-36:2 COMMENT - In this group of Phosphatidylserines, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 36, and the total number of double bonds in the two acyl groups adds up to 2. SYNONYMS - PS-36:2 SYNONYMS - PS36:2 // UNIQUE-ID - Phosphatidylserines-36-3 TYPES - L-1-PHOSPHATIDYL-SERINE COMMON-NAME - phosphatidylserine-36:3 COMMENT - In this group of Phosphatidylserines, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 36, and the total number of double bonds in the two acyl groups adds up to 3. SYNONYMS - PS-36:3 SYNONYMS - PS36:3 // UNIQUE-ID - Phosphatidylserines-36-4 TYPES - L-1-PHOSPHATIDYL-SERINE COMMON-NAME - phosphatidylserine-36:4 COMMENT - In this group of Phosphatidylserines, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 36, and the total number of double bonds in the two acyl groups adds up to 4. SYNONYMS - PS-36:4 SYNONYMS - PS36:4 // UNIQUE-ID - Phosphatidylserines-36-5 TYPES - L-1-PHOSPHATIDYL-SERINE COMMON-NAME - phosphatidylserine-36:5 COMMENT - In this group of Phosphatidylserines, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 36, and the total number of double bonds in the two acyl groups adds up to 5. SYNONYMS - PS-36:5 SYNONYMS - PS36:5 // UNIQUE-ID - Phosphatidylserines-36-6 TYPES - L-1-PHOSPHATIDYL-SERINE COMMON-NAME - phosphatidylserine-36:6 COMMENT - In this group of Phosphatidylserines, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 36, and the total number of double bonds in the two acyl groups adds up to 6. SYNONYMS - PS-36:6 SYNONYMS - PS36:6 // UNIQUE-ID - Phosphatidylserines-38-1 TYPES - L-1-PHOSPHATIDYL-SERINE COMMON-NAME - phosphatidylserine-38:1 COMMENT - In this group of Phosphatidylserines, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 38, and the total number of double bonds in the two acyl groups adds up to 1. SYNONYMS - PS-38:1 SYNONYMS - PS38:1 // UNIQUE-ID - Phosphatidylserines-38-2 TYPES - L-1-PHOSPHATIDYL-SERINE COMMON-NAME - phosphatidylserine-38:2 COMMENT - In this group of Phosphatidylserines, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 38, and the total number of double bonds in the two acyl groups adds up to 2. SYNONYMS - PS-38:2 SYNONYMS - PS38:2 // UNIQUE-ID - Phosphatidylserines-38-3 TYPES - L-1-PHOSPHATIDYL-SERINE COMMON-NAME - phosphatidylserine-38:3 COMMENT - In this group of Phosphatidylserines, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 38, and the total number of double bonds in the two acyl groups adds up to 3. SYNONYMS - PS-38:3 SYNONYMS - PS38:3 // UNIQUE-ID - Phosphatidylserines-38-4 TYPES - L-1-PHOSPHATIDYL-SERINE COMMON-NAME - phosphatidylserine-38:4 COMMENT - In this group of Phosphatidylserines, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 38, and the total number of double bonds in the two acyl groups adds up to 4. SYNONYMS - PS-38:4 SYNONYMS - PS38:4 // UNIQUE-ID - Phosphatidylserines-38-5 TYPES - L-1-PHOSPHATIDYL-SERINE COMMON-NAME - phosphatidylserine-38:5 COMMENT - In this group of Phosphatidylserines, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 38, and the total number of double bonds in the two acyl groups adds up to 5. SYNONYMS - PS-38:5 SYNONYMS - PS38:5 // UNIQUE-ID - Phosphatidylserines-38-6 TYPES - L-1-PHOSPHATIDYL-SERINE COMMON-NAME - phosphatidylserine-38:6 COMMENT - In this group of Phosphatidylserines, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 38, and the total number of double bonds in the two acyl groups adds up to 6. SYNONYMS - PS-38:6 SYNONYMS - PS38:6 // UNIQUE-ID - Phosphatidylserines-40-1 TYPES - L-1-PHOSPHATIDYL-SERINE COMMON-NAME - phosphatidylserine-40:1 COMMENT - In this group of Phosphatidylserines, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 40, and the total number of double bonds in the two acyl groups adds up to 1. SYNONYMS - PS-40:1 SYNONYMS - PS40:1 // UNIQUE-ID - Phosphatidylserines-40-2 TYPES - L-1-PHOSPHATIDYL-SERINE COMMON-NAME - phosphatidylserine-40:2 COMMENT - In this group of Phosphatidylserines, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 40, and the total number of double bonds in the two acyl groups adds up to 2. SYNONYMS - PS-40:2 SYNONYMS - PS40:2 // UNIQUE-ID - Phosphatidylserines-40-3 TYPES - L-1-PHOSPHATIDYL-SERINE COMMON-NAME - phosphatidylserine-40:3 COMMENT - In this group of Phosphatidylserines, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 40, and the total number of double bonds in the two acyl groups adds up to 3. SYNONYMS - PS-40:3 SYNONYMS - PS40:3 // UNIQUE-ID - Phosphatidylserines-40-4 TYPES - L-1-PHOSPHATIDYL-SERINE COMMON-NAME - phosphatidylserine-40:4 COMMENT - In this group of Phosphatidylserines, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 40, and the total number of double bonds in the two acyl groups adds up to 4. SYNONYMS - PS-40:4 SYNONYMS - PS40:4 // UNIQUE-ID - Phosphatidylserines-42-1 TYPES - L-1-PHOSPHATIDYL-SERINE COMMON-NAME - phosphatidylserine-42:1 COMMENT - In this group of Phosphatidylserines, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 42, and the total number of double bonds in the two acyl groups adds up to 1. SYNONYMS - PS-42:1 SYNONYMS - PS42:1 // UNIQUE-ID - Phosphatidylserines-42-2 TYPES - L-1-PHOSPHATIDYL-SERINE COMMON-NAME - phosphatidylserine-42:2 COMMENT - In this group of Phosphatidylserines, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 42, and the total number of double bonds in the two acyl groups adds up to 2. SYNONYMS - PS-42:2 SYNONYMS - PS42:2 // UNIQUE-ID - Phosphatidylserines-42-3 TYPES - L-1-PHOSPHATIDYL-SERINE COMMON-NAME - phosphatidylserine-42:3 COMMENT - In this group of Phosphatidylserines, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 42, and the total number of double bonds in the two acyl groups adds up to 3. SYNONYMS - PS-42:3 SYNONYMS - PS42:3 // UNIQUE-ID - Phosphatidylserines-42-4 TYPES - L-1-PHOSPHATIDYL-SERINE COMMON-NAME - phosphatidylserine-42:4 COMMENT - In this group of Phosphatidylserines, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 42, and the total number of double bonds in the two acyl groups adds up to 4. SYNONYMS - PS-42:4 SYNONYMS - PS42:4 // UNIQUE-ID - Phosphatidylserines-44-2 TYPES - L-1-PHOSPHATIDYL-SERINE COMMON-NAME - phosphatidylserine-44:2 COMMENT - In this group of Phosphatidylserines, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 44, and the total number of double bonds in the two acyl groups adds up to 2. SYNONYMS - PS-44:2 SYNONYMS - PS44:2 // UNIQUE-ID - Phosphatidylserines-44-3 TYPES - L-1-PHOSPHATIDYL-SERINE COMMON-NAME - phosphatidylserine-44:3 COMMENT - In this group of Phosphatidylserines, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 44, and the total number of double bonds in the two acyl groups adds up to 3. SYNONYMS - PS-44:3 SYNONYMS - PS44:3 // UNIQUE-ID - Protein-3-phospho-L-histidines TYPES - Protein-phospho-L-histidines COMMON-NAME - a protein-Nπ-phospho-L-histidine SYNONYMS - a protein-N-phosphohistidine SYNONYMS - 3'-phospho-L-histidine // UNIQUE-ID - Protein-N-phosphohistidine TYPES - Protein-phospho-L-histidines COMMON-NAME - a protein-Nτ-phospho-L-histidine SYNONYMS - a protein-N-phosphohistidine SYNONYMS - 1'-phospho-L-histidine // UNIQUE-ID - Cytochrome-c-N6-methyl-lysine TYPES - Cytochrome-c-L-lysine COMMON-NAME - a [cytochrome c]-N6-methyl-L-lysine // UNIQUE-ID - Tubulin-acetyl-L-lysine TYPES - Tubulin-L-Lysine COMMON-NAME - an [α-tubulin]-N6-acetyl-L-lysine // UNIQUE-ID - Cytochrome-c-S-methyl-methionine TYPES - Cytochrome-c-L-methionine COMMON-NAME - a [cytochrome c]-S-methyl-methionine // UNIQUE-ID - LDL-receptor-O-phospho-L-serine TYPES - LDL-receptor-L-serine COMMON-NAME - [low-density-lipoprotein receptor]-O-phospho-L-serine // UNIQUE-ID - Beta-D-Galactosides TYPES - Galactosides COMMON-NAME - a β-D-galactoside COMMENT - This compound class stands for generic and unspecified β-D-galactosides. SYNONYMS - a β-D-galactoside SYNONYMS - β-D-galactoside // UNIQUE-ID - Thioglucosides TYPES - Glucosides COMMON-NAME - a thioglucoside // UNIQUE-ID - Alpha-D-Glucuronides TYPES - Glucuronides COMMON-NAME - an α-D-glucuronoside // UNIQUE-ID - Beta-D-Glucuronides TYPES - Glucuronides COMMON-NAME - a β-D-glucuronoside SYNONYMS - a β-D-glucuronoside SYNONYMS - an acceptor β-D-glucuronoside SYNONYMS - a glucuronide // UNIQUE-ID - 3-Dehydropyranosides TYPES - Pyranosides COMMON-NAME - a 3-dehydropyranoside // UNIQUE-ID - 34-Didehydropyranosides TYPES - Pyranosides COMMON-NAME - a 3,4-didehydropyranoside // UNIQUE-ID - NDP-glucoses TYPES - NDP-sugars COMMON-NAME - an NDP-glucose SYNONYMS - a nucleoside diphosphate-glucose SYNONYMS - nucleoside diphosphate-glucose // UNIQUE-ID - D-Hexose-Phosphate TYPES - Hexose-phosphates COMMON-NAME - a D-hexose-phosphate // UNIQUE-ID - Hexose-1-Phosphate TYPES - Hexose-phosphates TYPES - Sugar-1-Phosphate COMMON-NAME - a hexose-1-phosphate // UNIQUE-ID - HEXOSE-6-PHOSPHATES TYPES - Hexose-phosphates TYPES - SUGAR-6-PHOSPHATES COMMON-NAME - a hexose-6-phosphate // UNIQUE-ID - Sorbose-phosphates TYPES - Hexose-phosphates COMMON-NAME - a sorbose-1-phosphate // UNIQUE-ID - PENTOSE-1-PHOSPHATES TYPES - Pentose-phosphates TYPES - Sugar-1-Phosphate COMMON-NAME - a pentose-1-phosphate // UNIQUE-ID - PENTOSE-5-PHOSPHATES TYPES - SUGAR-5-PHOSPHATES TYPES - Pentose-phosphates COMMON-NAME - a pentose-5-phosphate // UNIQUE-ID - D-Aldose-1-phosphates TYPES - Sugar-1-Phosphate COMMON-NAME - a D-aldose 1-phosphate // UNIQUE-ID - 36-Dideoxyhexoses TYPES - D-Hexoses TYPES - Modified-Sugars COMMON-NAME - a 3,6-dideoxyhexose // UNIQUE-ID - Beta-D-Fructofuranosides TYPES - Modified-Sugars COMMON-NAME - a β-D-fructofuranoside // UNIQUE-ID - BETA-GLUCOSIDES TYPES - Modified-Sugars COMMON-NAME - a β-glucoside // UNIQUE-ID - Aldoses TYPES - Monosaccharides COMMON-NAME - an aldose SYNONYMS - an aldose // UNIQUE-ID - Amino-Sugars TYPES - Monosaccharides COMMON-NAME - an amino sugar // UNIQUE-ID - Heptoses TYPES - Monosaccharides COMMON-NAME - a heptose // UNIQUE-ID - Hexoses TYPES - Monosaccharides COMMON-NAME - a hexose // UNIQUE-ID - Pentoses TYPES - Monosaccharides COMMON-NAME - a pentose // UNIQUE-ID - Tetroses TYPES - Monosaccharides COMMON-NAME - a tetrose // UNIQUE-ID - Galactose-beta-13-N-glycans TYPES - N-Glycans COMMON-NAME - a galactose-β-1,3-N-glycan // UNIQUE-ID - 16-a-D-Man-16-a-D-Man-Oligosac TYPES - Oligosaccharides COMMON-NAME - a (1->6)-α-D-mannose-(1->6)α-D-mannosyl-oligosaccharide // UNIQUE-ID - 16-alpha-D-Mannosyloligosaccharides TYPES - Oligosaccharides COMMON-NAME - a 1,6-α-D-mannosyloligosaccharide // UNIQUE-ID - D-fructofuranosyl-2-1-D-glucopyranosides TYPES - Oligosaccharides COMMON-NAME - [1-β-D-fructofuranosyl-(2->1)-](n)α-D-glucopyranoside // UNIQUE-ID - D-fructofuranosyl-26-D-glucopyranosides TYPES - Oligosaccharides COMMON-NAME - [1-β-D-fructofuranosyl-(2->1)-](n) β-D-fructofuranosyl-(2->6)-α-D-glucopyranoside // UNIQUE-ID - Disaccharides TYPES - Oligosaccharides COMMON-NAME - a disaccharide // UNIQUE-ID - Hexasaccharides TYPES - Oligosaccharides COMMON-NAME - an hexasaccharide // UNIQUE-ID - Lipid-linked-13-mannosyl-mannose-oligos TYPES - Oligosaccharides COMMON-NAME - a lipid-linked α(1->3)-D-mannosyl-D-mannose-oligosaccharide // UNIQUE-ID - Neoagaro-oligosaccharides TYPES - Oligosaccharides COMMON-NAME - a neoagaro-oligosaccharide // UNIQUE-ID - Osmoregulated-Periplasmic-Glucans TYPES - Oligosaccharides COMMON-NAME - an osmoregulated periplasmic glucan SYNONYMS - OPGs SYNONYMS - periplasmic β-D-glucans // UNIQUE-ID - Pentasaccharides TYPES - Oligosaccharides COMMON-NAME - a pentasaccharide // UNIQUE-ID - Tetrasaccharides TYPES - Oligosaccharides COMMON-NAME - a tetrasaccharide // UNIQUE-ID - Trisaccharides TYPES - Oligosaccharides COMMON-NAME - a trisaccharide // UNIQUE-ID - Agaroses TYPES - Polysaccharides COMMON-NAME - an agarose // UNIQUE-ID - Arabinan TYPES - Polysaccharides COMMON-NAME - an arabinan // UNIQUE-ID - Carrageenans TYPES - Polysaccharides COMMON-NAME - a carrageenan COMMENT - Carrageenans are sulphated polysaccharides that are extracted from sea weeds belonging to the Rhodophyta, mainly from |FRAME: TAX-2769|, Euchema and Gigartina. The basic units are repeats of alpha -1,3 linked D-galactose and beta 1,4- linked D-galactose |CITS: [1367970]|. These repeating units allow gelation due to the presence of a 3,6 - anhydro bridge on the beta 1,4- linked galactose unit giving rise to a double helix during gelation. // UNIQUE-ID - CPD-11244 TYPES - Polysaccharides COMMON-NAME - a pectate oligosaccharide with 4-(4-deoxy-α-D-galact-4-enuronosyl)-D-galacturonate end // UNIQUE-ID - Dextrins TYPES - Polysaccharides COMMON-NAME - a dextrin // UNIQUE-ID - Feruloyl-polysaccharides TYPES - Polysaccharides COMMON-NAME - a feruloyl-polysaccharide // UNIQUE-ID - Fructans TYPES - Polysaccharides COMMON-NAME - a fructan COMMENT - Fructans are a class of highly water-soluble polysaccharides consisting of linear or branched /|FRAME:FRU| chains attached to |FRAME: SUCROSE| by β-2,1or β-2,6-linkage. /There are 3 types of fructans: / /1. |FRAME: Inulin| - linear fructans generally linked by β(2->1) glycosidic bonds / /2. |FRAME: Levan| - linear fructans generally linked by β(2->6) glycosidic bonds / /3. |FRAME: Graminans| - branched fructans linked by both β(2->1) and β(2->6) glycosidic bonds. / /The fructosyl units may be linked to the sucrose base unit either to the fructose moiety, or to the /glucose moiety by a β 6->2 bond. In the later case, the resulting molecule name is marked by a /6G, as in |FRAME: 6G-KESTOTETRAOSE|. // UNIQUE-ID - Galactogen TYPES - Polysaccharides COMMON-NAME - a galactogen COMMENT - Galactogen is a branched-chain homopolymer of galactose. /Galactogen has been found in the albumen glands of several molluscan genera, as well as in /cattle, carp, rabbit and man |CITS: [14931082][14338985][2505854 ]|. SYNONYMS - 1,6-β-D-galactosyl-galactogen // UNIQUE-ID - Glucomannans TYPES - Polysaccharides COMMON-NAME - a glucomannan // UNIQUE-ID - Glycogens TYPES - Polysaccharides COMMON-NAME - a glycogen COMMENT - Glycogen is a glucose polymer resembling the starch in plants (so it is sometimes called "animal starch"). /Glycogen is a highly branched glucose polymer. It is formed of small chains of 8 to 12 glucose molecules linked /together with α (1->4) bonds (also called maltodextrin). These small chains are in turn linked together with /α (1->6) bonds. /A single molecule of glycogen can be made of up to 120,000 molecules of glucose. It is stored in the form of granules /in the cytosol. // UNIQUE-ID - Hemicelluloses TYPES - Polysaccharides COMMON-NAME - a hemicellulose // UNIQUE-ID - Heteroglycans TYPES - Polysaccharides COMMON-NAME - heteroglycan // UNIQUE-ID - Large-branched-glucans TYPES - Polysaccharides COMMON-NAME - a large-branched glucan // UNIQUE-ID - Long-linear-glucans TYPES - Polysaccharides COMMON-NAME - a long-linear glucan // UNIQUE-ID - O-Antigens TYPES - Polysaccharides COMMON-NAME - an O-antigen COMMENT - O-antigens are part of |FRAME: Lipopolysaccharides|. /Lipopolysaccharides are a major component of the outer membrane of Gram-negative bacteria. /While they are protecting the membrane from certain kinds of chemical attacks, they also /induce a strong response from animal immune systems. /Lipopolysaccharides contain three parts: a lipid (lipid A), a core polysaccharide, and polysaccharide /(O) side chains. / /The side chain is referred to as an O-antigen. Its composition varies among different strains. / SYNONYMS - an O-specific polysaccharide // UNIQUE-ID - PECTATE TYPES - Polysaccharides COMMON-NAME - a pectate COMMENT - |FRAME: Pectin| is a structural heteropolysaccharide consisting of a complex set of polysaccharides that is present in most /primary cell walls and is particularly abundant in the non-woody parts of terrestrial plants. /The characteristic structure of pectin is a linear chain of α-(1-4)-linked D-galacturonate that forms the /pectin-backbone, |FRAME: 1-4-alpha-D-galacturonosyl|. / /Diferent types of pectin have different substitutions and additions. /A common type is rhamnogalacturonan, where some galacturonate units are replaced by (1-2)-linked L-rhamnose, to which. /sidechains of various neutral sugars branch off, mostly D-galactose, L-arabinose and D-xylose. / /In nature, around 80% of the carboxyl groups of the galacturonate units are esterified with methanol. /Some plants like sugar beet, potatoes and pears contain pectins with acetylated galacturonic acid in addition to /methyl esters. / /The salt of partially esterified pectins is called a pectinate, and if the degree of esterification is below 5%, /|FRAME: PECTATE|. SYNONYMS - a pectic acid SYNONYMS - an α-D-polygalacturonic acid SYNONYMS - a poly(1,4-α-D-galacturonate) SYNONYMS - a poly(1,4-α-D-galacturonate)(n) // UNIQUE-ID - Pectin TYPES - Polysaccharides COMMON-NAME - a pectin COMMENT - |FRAME: Pectin "Pectin"| is a structural heteropolysaccharide consisting of a complex set of polysaccharides that is present in most primary cell walls and is particularly abundant in the non-woody parts of terrestrial plants. /The characteristic structure of pectin is a linear chain of α-(1-4)-linked |FRAME: D-GALACTURONATE| that forms the pectin-backbone, |FRAME: 1-4-alpha-D-galacturonosyl|. / /Diferent types of pectin have different substitutions and additions. /A common type is rhamnogalacturonan, where some |FRAME: D-GALACTURONATE| units are replaced by (1-2)-linked |FRAME: L-rhamnose|, to which side chains of various neutral sugars branch off, mostly |FRAME: D-Galactose|, |FRAME: L-ARABINOSE| and |FRAME: XYLOSE|. / /In nature, around 80% of the carboxyl groups of the galacturonate units are esterified with |FRAME: METOH|. /Some plants, including sugar beet, potatoes and pears, contain pectins with acetylated galacturonate in addition to /methyl esters. / /The salt of partially esterified pectins is called a pectinate, and if the degree of esterification is below 5%, /|FRAME: PECTATE|. // UNIQUE-ID - Short-glucans TYPES - Polysaccharides COMMON-NAME - a short glucan // UNIQUE-ID - Starch TYPES - Polysaccharides COMMON-NAME - starch COMMENT - Starch is a combination of two polymeric carbohydrates (polysaccharides) called |FRAME: Alpha-Amyloses| /and |FRAME: CPD-7043|. /|FRAME: Alpha-Amyloses| contains up to several thousand α-glucosyl units linked almost exclusively in /linear α(1->4) linkages, with very few branches of α(1->6) linkages. In |FRAME: CPD-7043|, /on the other hand, branching is common, and occurs approximately every 24-30 glucose monomer units. /|FRAME: Alpha-Amyloses| accounts for 30% of starch, while |FRAME: CPD-7043| accounts for the other 70%. / // UNIQUE-ID - Xyloglucans TYPES - Polysaccharides COMMON-NAME - a xylose/galactose/fucose xyloglucan COMMENT - This compound consists of a backbone of β-1,4-linked glucosyl residues. It is /substituted with sidechains composed of xylosyl, galactosyl, fucosyl, and arabinosyl residues |CITS: [9884411]|. SYNONYMS - a xyloglucan // UNIQUE-ID - Purine-Diphosphates TYPES - Ribonucleoside-Diphosphates COMMON-NAME - a purine diphosphate SYNONYMS - RDP SYNONYMS - purine-diphosphate // UNIQUE-ID - Purine-Triphosphates TYPES - Ribonucleoside-Triphosphates COMMON-NAME - a purine triphosphate COMMENT - Purines are heterocyclic aromatic compounds that contain a |FRAME:PYRIMIDINE-RING| ring fused to an /|FRAME: IMIDAZOLE-RING| ring. /Two of the bases in nucleic acids, adenine and guanine, are purines. / SYNONYMS - RTP // UNIQUE-ID - Pyrimidine-Triphosphates TYPES - Ribonucleoside-Triphosphates COMMON-NAME - a pyrimidine triphosphate COMMENT - Pyrimidines are heterocyclic aromatic compounds similar to benzene, containing two nitrogen atoms /at positions 1 and 3 of the ring. /Three of the nucleosides found in nucleic acids, cytosine, thymine, and uracil, are pyrimidine derivatives. / // UNIQUE-ID - CPD-10363 TYPES - GLYCOSYLGLYCERIDES COMMON-NAME - a β,β digalactosyldiacylglycerol COMMENT - Note, this is different from the most commonly found DGDG, the α-D-galactosyl-(1->6)-β-D-galactosyl)-1,2-diacyl-sn-glycerol (|FRAME: Galactosyl-galactosyl-diacyl-glycerols|). SYNONYMS - a (β-D-galactosyl-(1->6)-β-D-galactosyl)-1,2-diacyl-sn-glycerol SYNONYMS - an β-D-galactosyl-β-D-galactosyldiacylglycerol SYNONYMS - DGDG // UNIQUE-ID - CPD-10364 TYPES - GLYCOSYLGLYCERIDES COMMON-NAME - a trigalactosyldiacylglycerol SYNONYMS - a (β-D-galactosyl-(1->6)-β-D-galactosyl-(1->6)-β-D-galactosyl)-1,2-diacyl-sn-glycerol SYNONYMS - TGDG SYNONYMS - 1,2-Diacyl-3-O-(beta-D-galactosyl(1->6)-O-beta-D-galactosyl(1->6)-O-beta-D-galactosyl)-sn-glycerol // UNIQUE-ID - D-Galactosyl-12-diacyl-glycerols TYPES - GLYCOSYLGLYCERIDES COMMON-NAME - a monogalactosyldiacylgycerol SYNONYMS - a D-galactosyldiacylglycerol SYNONYMS - a 3-(β-D-galactosyl)-1,2-diacyl-sn-glycerol SYNONYMS - a 3-β-D-galactosyl-1,2-diacylglycerol SYNONYMS - a / /monogalactosyldiglyceride SYNONYMS - MGDG SYNONYMS - a Galβ1->3acyl2Gro SYNONYMS - a mono-β-D-galactosyldiacylglycerol // UNIQUE-ID - Galactosyl-galactosyl-diacyl-glycerols TYPES - GLYCOSYLGLYCERIDES COMMON-NAME - a digalactosyldiacylglycerol SYNONYMS - a (α-D-galactosyl-(1->6)-β-D-galactosyl)-1,2-diacyl-sn-glycerol SYNONYMS - a 3(α-D-galactosyl-(1->6)-β-D-galactosyl)-1,2-diacyl-sn-glycerol SYNONYMS - DGDG SYNONYMS - an α-D-galactosyl-β-D-galactosyldiacylglycerol // UNIQUE-ID - D-3-HYDROXYACYL-COA TYPES - 3-HYDROXYACYL-COA COMMON-NAME - a (3R)-3-hydroxyacyl-CoA SYNONYMS - a D-3-hydroxyacyl-CoA SYNONYMS - an (R)-hydroxyacyl-CoA SYNONYMS - a cis-3-hydroxyacyl-CoA SYNONYMS - a 3-OH-acyl-CoA SYNONYMS - a 3-hydroxyacyl-CoA // UNIQUE-ID - L-3-HYDROXYACYL-COA TYPES - 3-HYDROXYACYL-COA COMMON-NAME - a (3S)-3-hydroxyacyl-CoA SYNONYMS - a (S)-3-hydroxyacyl-CoA SYNONYMS - a trans-3-hydroxyacyl-CoA SYNONYMS - a 3-OH-acyl-CoA SYNONYMS - a 3-hydroxyacyl-CoA SYNONYMS - an L-3-hydroxyacyl-CoA // UNIQUE-ID - Fatty-Acyl-CoA TYPES - ACYL-COA COMMON-NAME - a fatty acyl CoA COMMENT - The fatty acid moiety typically has 14-24 carbon atoms. The 16- and 18-carbon fatty acids are the most common. / SYNONYMS - a fatty acyl-CoA SYNONYMS - fatty acyl CoA- SYNONYMS - acyl-CoA // UNIQUE-ID - Long-Chain-Acyl-CoAs TYPES - ACYL-COA COMMON-NAME - a long-chain acyl-CoA SYNONYMS - long-chain acyl-CoA // UNIQUE-ID - CIS-D2-ENOYL-COA TYPES - D2-ENOYL-COA COMMON-NAME - a cis-2,3-dehydroacyl-CoA // UNIQUE-ID - TRANS-D2-ENOYL-COA TYPES - D2-ENOYL-COA COMMON-NAME - a trans-2-enoyl-CoA SYNONYMS - trans-2,3-didehydroacyl-CoA SYNONYMS - trans-2,3-dehydroacyl-CoA SYNONYMS - trans-Δ2-enoyl-CoA SYNONYMS - trans-didehydroacyl-CoA SYNONYMS - a (2E)-2-enoyl-CoA // UNIQUE-ID - Long-Chain-Polyphosphate TYPES - Polyphosphates COMMON-NAME - long chain polyphosphate COMMENT - This class stands for long chain polyphosphates, which are linear polymers of tens or hundreds of orthophosphate /(Pi) residues linked in the same manner as the two high-energy phosphoanhydride bonds in ATP. /They are substrates of different enzymes, such as exophosphatases (e.g. Ppx in E. coli and the /polyphosphate-dependent glucokinases (EC 2.7.1.63). SYNONYMS - (phosphate)(n) SYNONYMS - (phosphate)(n+1) SYNONYMS - (phosphate)(n-1) SYNONYMS - (polyphosphate)(n) SYNONYMS - (polyphosphate)(n+1) SYNONYMS - (polyphosphate)(n-1) SYNONYMS - PolyP SYNONYMS - inorganic polyphosphate // UNIQUE-ID - Lysophosphatidylcholines-16-0 TYPES - 1-Acylglycero-Phosphocholines COMMON-NAME - lysophosphatidylcholine-16:0 SYNONYMS - lysoPC-16:0 SYNONYMS - lysoPC16:0 // UNIQUE-ID - Lysophosphatidylcholines-16-1 TYPES - 1-Acylglycero-Phosphocholines COMMON-NAME - lysophosphatidylcholine-16:1 SYNONYMS - lysoPC-16:1 SYNONYMS - lysoPC16:1 // UNIQUE-ID - Lysophosphatidylcholines-18-0 TYPES - 1-Acylglycero-Phosphocholines COMMON-NAME - lysophosphatidylcholine-18:0 SYNONYMS - lysoPC-18:0 SYNONYMS - lysoPC18:0 // UNIQUE-ID - Lysophosphatidylcholines-18-1 TYPES - 1-Acylglycero-Phosphocholines COMMON-NAME - lysophosphatidylcholine-18:1 SYNONYMS - lysoPC-18:1 SYNONYMS - lysoPC18:1 // UNIQUE-ID - Lysophosphatidylcholines-18-2 TYPES - 1-Acylglycero-Phosphocholines COMMON-NAME - lysophosphatidylcholine-18:2 SYNONYMS - lysoPC-18:2 SYNONYMS - lysoPC18:2 // UNIQUE-ID - Lysophosphatidylcholines-18-3 TYPES - 1-Acylglycero-Phosphocholines COMMON-NAME - lysophosphatidylcholine-18:3 SYNONYMS - lysoPC-18:3 SYNONYMS - lysoPC18:3 // UNIQUE-ID - Lysophosphatidylglycerols-16-0 TYPES - 1-Lysophosphatidylglycerols SYNONYMS - lysophosphatidylglycerol-16:0 SYNONYMS - lysoPG-16:0 SYNONYMS - lysoPG16:0 // UNIQUE-ID - Lysophosphatidylglycerols-16-1 TYPES - 1-Lysophosphatidylglycerols SYNONYMS - lysophosphatidylglycerol-16:1 SYNONYMS - lysoPG-16:1 SYNONYMS - lysoPG16:1 // UNIQUE-ID - Lysophosphatidylethanolamines-16-0 TYPES - 2-LYSOPHOSPHATIDYLETHANOLAMINES COMMON-NAME - lysophosphatidylethanolamine-16:0 SYNONYMS - lysoPE-16:0 SYNONYMS - lysoPE16:0 // UNIQUE-ID - Lysophosphatidylethanolamines-16-1 TYPES - 2-LYSOPHOSPHATIDYLETHANOLAMINES COMMON-NAME - lysophosphatidylethanolamine-16:1 SYNONYMS - lysoPE-16:1 SYNONYMS - lysoPE16:1 // UNIQUE-ID - Lysophosphatidylethanolamines-18-1 TYPES - 2-LYSOPHOSPHATIDYLETHANOLAMINES COMMON-NAME - lysophosphatidylethanolamine-18:1 SYNONYMS - lysoPE-18:1 SYNONYMS - lysoPE18:1 // UNIQUE-ID - Lysophosphatidylethanolamines-18-2 TYPES - 2-LYSOPHOSPHATIDYLETHANOLAMINES COMMON-NAME - lysophosphatidylethanolamine-18:2 SYNONYMS - lysoPE-18:2 SYNONYMS - lysoPE18:2 // UNIQUE-ID - Lysophosphatidylethanolamines-18-3 TYPES - 2-LYSOPHOSPHATIDYLETHANOLAMINES COMMON-NAME - lysophosphatidylethanolamine-18:3 SYNONYMS - lysoPE-18:3 SYNONYMS - lysoPE18:3 // UNIQUE-ID - Lysophosphatidylglycerols-18-1 TYPES - 2-Lysophosphatidylglycerols COMMON-NAME - lysophosphatidylglycerol-18:1 SYNONYMS - lysoPG-18:1 SYNONYMS - lysoPG18:1 // UNIQUE-ID - Lysophosphatidylglycerols-18-2 TYPES - 2-Lysophosphatidylglycerols COMMON-NAME - lysophosphatidylglycerol-18:2 SYNONYMS - lysoPG-18:2 SYNONYMS - lysoPG18:2 // UNIQUE-ID - Lysophosphatidylglycerols-18-3 TYPES - 2-Lysophosphatidylglycerols COMMON-NAME - lysophosphatidylglycerol-18:3 SYNONYMS - lysoPG-18:3 SYNONYMS - lysoPG18:3 // UNIQUE-ID - Saturated-2-Lysophosphatidates TYPES - ACYL-SN-GLYCEROL-3P COMMON-NAME - a 2,3,4-saturated 2-lysophosphatidate SYNONYMS - 1-acyl-sn-glycerol-3-phosphate SYNONYMS - acyl-sn-glycerol-3P SYNONYMS - acyl-sn-glycerol-3-phosphate SYNONYMS - a 1-acyl-sn-glycerol-3-phosphate SYNONYMS - an acyl-sn-glycerol-3P SYNONYMS - an acyl-sn-glycerol-3-phosphate SYNONYMS - a 1-acyl-sn-glycerol-3P // UNIQUE-ID - Phosphatidylethanolamines-34-1 TYPES - L-1-PHOSPHATIDYL-ETHANOLAMINE COMMON-NAME - phosphatidylethanolamine-34:1 COMMENT - In this group of Phosphatidylethanolamines, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 34, and the total number of double bonds in the two acyl groups adds up to 1. SYNONYMS - PE-34:1 SYNONYMS - PE34:1 // UNIQUE-ID - Phosphatidylethanolamines-34-2 TYPES - L-1-PHOSPHATIDYL-ETHANOLAMINE COMMON-NAME - phosphatidylethanolamine-34:2 COMMENT - In this group of Phosphatidylethanolamines, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 34, and the total number of double bonds in the two acyl groups adds up to 2. SYNONYMS - PE-34:2 SYNONYMS - PE34:2 // UNIQUE-ID - Phosphatidylethanolamines-34-3 TYPES - L-1-PHOSPHATIDYL-ETHANOLAMINE COMMON-NAME - phosphatidylethanolamine-34:3 COMMENT - In this group of Phosphatidylethanolamines, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 34, and the total number of double bonds in the two acyl groups adds up to 3. SYNONYMS - PE-34:3 SYNONYMS - PE34:3 // UNIQUE-ID - Phosphatidylethanolamines-34-4 TYPES - L-1-PHOSPHATIDYL-ETHANOLAMINE COMMON-NAME - phosphatidylethanolamine-34:4 COMMENT - In this group of Phosphatidylethanolamines, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 34, and the total number of double bonds in the two acyl groups adds up to 4. SYNONYMS - PE-34:4 SYNONYMS - PE34:4 // UNIQUE-ID - Phosphatidylethanolamines-36-1 TYPES - L-1-PHOSPHATIDYL-ETHANOLAMINE COMMON-NAME - phosphatidylethanolamine-36:1 COMMENT - In this group of Phosphatidylethanolamines, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 36, and the total number of double bonds in the two acyl groups adds up to 1. SYNONYMS - PE-36:1 SYNONYMS - PE36:1 // UNIQUE-ID - Phosphatidylethanolamines-36-2 TYPES - L-1-PHOSPHATIDYL-ETHANOLAMINE COMMON-NAME - phosphatidylethanolamine-36:2 COMMENT - In this group of Phosphatidylethanolamines, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 36, and the total number of double bonds in the two acyl groups adds up to 2. SYNONYMS - PE-36:2 SYNONYMS - PE36:2 // UNIQUE-ID - Phosphatidylethanolamines-36-3 TYPES - L-1-PHOSPHATIDYL-ETHANOLAMINE COMMON-NAME - phosphatidylethanolamine-36:3 COMMENT - In this group of Phosphatidylethanolamines, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 36, and the total number of double bonds in the two acyl groups adds up to 3. SYNONYMS - PE-36:3 SYNONYMS - PE36:3 // UNIQUE-ID - Phosphatidylethanolamines-36-4 TYPES - L-1-PHOSPHATIDYL-ETHANOLAMINE COMMON-NAME - phosphatidylethanolamine-36:4 COMMENT - In this group of Phosphatidylethanolamines, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 36, and the total number of double bonds in the two acyl groups adds up to 4. SYNONYMS - PE-36:4 SYNONYMS - PE36:4 // UNIQUE-ID - Phosphatidylethanolamines-36-5 TYPES - L-1-PHOSPHATIDYL-ETHANOLAMINE COMMON-NAME - phosphatidylethanolamine-36:5 COMMENT - In this group of Phosphatidylethanolamines, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 36, and the total number of double bonds in the two acyl groups adds up to 5. SYNONYMS - PE-36:5 SYNONYMS - PE36:5 // UNIQUE-ID - Phosphatidylethanolamines-36-6 TYPES - L-1-PHOSPHATIDYL-ETHANOLAMINE COMMON-NAME - phosphatidylethanolamine-36:6 COMMENT - In this group of Phosphatidylethanolamines, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 36, and the total number of double bonds in the two acyl groups adds up to 6. SYNONYMS - PE-36:6 SYNONYMS - PE36:6 // UNIQUE-ID - Phosphatidylethanolamines-38-2 TYPES - L-1-PHOSPHATIDYL-ETHANOLAMINE COMMON-NAME - phosphatidylethanolamine-38:2 COMMENT - In this group of Phosphatidylethanolamines, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 38, and the total number of double bonds in the two acyl groups adds up to 2. SYNONYMS - PE-38:2 SYNONYMS - PE38:2 // UNIQUE-ID - Phosphatidylethanolamines-38-3 TYPES - L-1-PHOSPHATIDYL-ETHANOLAMINE COMMON-NAME - phosphatidylethanolamine-38:3 COMMENT - In this group of Phosphatidylethanolamines, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 38, and the total number of double bonds in the two acyl groups adds up to 3. SYNONYMS - PE-38:3 SYNONYMS - PE38:3 // UNIQUE-ID - Phosphatidylethanolamines-38-4 TYPES - L-1-PHOSPHATIDYL-ETHANOLAMINE COMMON-NAME - phosphatidylethanolamine-38:4 COMMENT - In this group of Phosphatidylethanolamines, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 38, and the total number of double bonds in the two acyl groups adds up to 4. SYNONYMS - PE-38:4 SYNONYMS - PE38:4 // UNIQUE-ID - Phosphatidylethanolamines-38-5 TYPES - L-1-PHOSPHATIDYL-ETHANOLAMINE COMMON-NAME - phosphatidylethanolamine-38:5 COMMENT - In this group of Phosphatidylethanolamines, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 38, and the total number of double bonds in the two acyl groups adds up to 5. SYNONYMS - PE-38:5 SYNONYMS - PE38:5 // UNIQUE-ID - Phosphatidylethanolamines-38-6 TYPES - L-1-PHOSPHATIDYL-ETHANOLAMINE COMMON-NAME - phosphatidylethanolamine-38:6 COMMENT - In this group of Phosphatidylethanolamines, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 38, and the total number of double bonds in the two acyl groups adds up to 6. SYNONYMS - PE-38:6 SYNONYMS - PE38:6 // UNIQUE-ID - Phosphatidylethanolamines-40-2 TYPES - L-1-PHOSPHATIDYL-ETHANOLAMINE COMMON-NAME - phosphatidylethanolamine-40:2 COMMENT - In this group of Phosphatidylethanolamines, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 40, and the total number of double bonds in the two acyl groups adds up to 2. SYNONYMS - PE-40:2 SYNONYMS - PE40:2 // UNIQUE-ID - Phosphatidylethanolamines-40-3 TYPES - L-1-PHOSPHATIDYL-ETHANOLAMINE COMMON-NAME - phosphatidylethanolamine-40:3 COMMENT - In this group of Phosphatidylethanolamines, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 40, and the total number of double bonds in the two acyl groups adds up to 3. SYNONYMS - PE-40:3 SYNONYMS - PE40:3 // UNIQUE-ID - Phosphatidylethanolamines-42-2 TYPES - L-1-PHOSPHATIDYL-ETHANOLAMINE COMMON-NAME - phosphatidylethanolamine-42:2 COMMENT - In this group of Phosphatidylethanolamines, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 42, and the total number of double bonds in the two acyl groups adds up to 2. SYNONYMS - PE-42:2 SYNONYMS - PE42:2 // UNIQUE-ID - Phosphatidylethanolamines-42-3 TYPES - L-1-PHOSPHATIDYL-ETHANOLAMINE COMMON-NAME - phosphatidylethanolamine-42:3 COMMENT - In this group of Phosphatidylethanolamines, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 42, and the total number of double bonds in the two acyl groups adds up to 3. SYNONYMS - PE-42:3 SYNONYMS - PE42:3 // UNIQUE-ID - Phosphatidylethanolamines-42-4 TYPES - L-1-PHOSPHATIDYL-ETHANOLAMINE COMMON-NAME - phosphatidylethanolamine-42:4 COMMENT - In this group of Phosphatidylethanolamines, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 42, and the total number of double bonds in the two acyl groups adds up to 4. SYNONYMS - PE-42:4 SYNONYMS - PE42:4 // UNIQUE-ID - Phosphatidylglycerols-32-0 TYPES - L-1-PHOSPHATIDYL-GLYCEROL COMMON-NAME - phosphatidylglycerol-32:0 COMMENT - In this group of Phosphatidylglycerols, the length of the two acyl chains varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 32. SYNONYMS - PG-32:0 SYNONYMS - PG32:0 // UNIQUE-ID - Phosphatidylglycerols-32-1 TYPES - L-1-PHOSPHATIDYL-GLYCEROL COMMON-NAME - phosphatidylglycerol-32:1 COMMENT - In this group of Phosphatidylglycerols, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 32, and the total number of double bonds in the two acyl groups adds up to 1. SYNONYMS - PG-32:1 SYNONYMS - PG32:1 // UNIQUE-ID - Phosphatidylglycerols-34-0 TYPES - L-1-PHOSPHATIDYL-GLYCEROL COMMON-NAME - phosphatidylglycerol-34:0 COMMENT - In this group of Phosphatidylglycerols, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 34, and the total number of double bonds in the two acyl groups adds up to 0. SYNONYMS - PG-34:0 SYNONYMS - PG34:0 // UNIQUE-ID - Phosphatidylglycerols-34-1 TYPES - L-1-PHOSPHATIDYL-GLYCEROL COMMON-NAME - phosphatidylglycerol-34:1 COMMENT - In this group of Phosphatidylglycerols, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 34, and the total number of double bonds in the two acyl groups adds up to 1. SYNONYMS - PG-34:1 SYNONYMS - PG34:1 // UNIQUE-ID - Phosphatidylglycerols-34-2 TYPES - L-1-PHOSPHATIDYL-GLYCEROL COMMON-NAME - phosphatidylglycerol-34:2 COMMENT - In this group of Phosphatidylglycerols, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 34, and the total number of double bonds in the two acyl groups adds up to 2. SYNONYMS - PG-34:2 SYNONYMS - PG34:2 // UNIQUE-ID - Phosphatidylglycerols-34-3 TYPES - L-1-PHOSPHATIDYL-GLYCEROL COMMON-NAME - phosphatidylglycerol-34:3 COMMENT - In this group of Phosphatidylglycerols, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 34, and the total number of double bonds in the two acyl groups adds up to 3. SYNONYMS - PG-34:3 SYNONYMS - PG34:3 // UNIQUE-ID - Phosphatidylglycerols-34-4 TYPES - L-1-PHOSPHATIDYL-GLYCEROL COMMON-NAME - phosphatidylglycerol-34:4 COMMENT - In this group of Phosphatidylglycerols, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 34, and the total number of double bonds in the two acyl groups adds up to 4. SYNONYMS - PG-34:4 SYNONYMS - PG34:4 // UNIQUE-ID - 2-3-4-Saturated-L-Phosphatidates TYPES - L-PHOSPHATIDATE COMMON-NAME - a 2,3,4-saturated L-phosphatidate COMMENT - Phosphatidates consist of a glycerol backbone, with a (usually) saturated fatty acid bonded to carbon-1, /a (usually) unsaturated fatty acid bonded to carbon-2, and a phosphate group bonded to carbon-3. SYNONYMS - phosphatidate (E.coli) SYNONYMS - L-phosphatidate SYNONYMS - A 3-SN-phosphatidate SYNONYMS - diacyl-glycerol-3p SYNONYMS - diacyl-glycerol-p SYNONYMS - 1,2-diacyl-sn-glycerol-3-phosphate SYNONYMS - phosphatidic acid SYNONYMS - 1,2-diacylglycerol-3-phosphate SYNONYMS - phosphatidate SYNONYMS - diacylglycerol-3-phosphate SYNONYMS - a phosphatidylglycerol SYNONYMS - a 3-sn-phosphatidate SYNONYMS - a diacyl-glycerol-3p SYNONYMS - a diacyl-glycerol-p SYNONYMS - a 1,2-diacyl-sn-glycerol-3-phosphate SYNONYMS - a phosphatidic acid SYNONYMS - a 1,2-diacylglycerol-3-phosphate SYNONYMS - a phosphatidate SYNONYMS - a diacylglycerol-3-phosphate // UNIQUE-ID - Phosphatidates-34-1 TYPES - L-PHOSPHATIDATE COMMON-NAME - phosphatidate-34:1 COMMENT - In this group of phosphatidates, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 34, and the total number of double bonds in the two acyl groups adds up to 1. SYNONYMS - phosphatidic acid-34:1 SYNONYMS - PA-34:1 SYNONYMS - PA34:1 // UNIQUE-ID - Phosphatidates-34-2 TYPES - L-PHOSPHATIDATE COMMON-NAME - phosphatidate-34:2 COMMENT - In this group of phosphatidates, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 34, and the total number of double bonds in the two acyl groups adds up to 2. SYNONYMS - phosphatidic acid-34:2 SYNONYMS - PA-34:2 SYNONYMS - PA34:2 // UNIQUE-ID - Phosphatidates-34-3 TYPES - L-PHOSPHATIDATE COMMON-NAME - phosphatidate-34:3 COMMENT - In this group of phosphatidates, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 34, and the total number of double bonds in the two acyl groups adds up to 3. SYNONYMS - phosphatidic acid-34:3 SYNONYMS - PA-34:3 SYNONYMS - PA34:3 // UNIQUE-ID - Phosphatidates-34-4 TYPES - L-PHOSPHATIDATE COMMON-NAME - phosphatidate-34:4 COMMENT - In this group of phosphatidates, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 34, and the total number of double bonds in the two acyl groups adds up to 4. SYNONYMS - phosphatidic acid-34:4 SYNONYMS - PA-34:4 SYNONYMS - PA34:4 // UNIQUE-ID - Phosphatidates-34-6 TYPES - L-PHOSPHATIDATE COMMON-NAME - phosphatidate-34:6 COMMENT - In this group of phosphatidates, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 34, and the total number of double bonds in the two acyl groups adds up to 6. SYNONYMS - phosphatidic acid-34:6 SYNONYMS - PA-34:6 SYNONYMS - PA34:6 // UNIQUE-ID - Phosphatidates-36-2 TYPES - L-PHOSPHATIDATE COMMON-NAME - phosphatidate-36:2 COMMENT - In this group of phosphatidates, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 36, and the total number of double bonds in the two acyl groups adds up to 2. SYNONYMS - phosphatidic acid-36:2 SYNONYMS - PA-36:2 SYNONYMS - PA36:2 // UNIQUE-ID - Phosphatidates-36-3 TYPES - L-PHOSPHATIDATE COMMON-NAME - phosphatidate-36:3 COMMENT - In this group of phosphatidates, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 36, and the total number of double bonds in the two acyl groups adds up to 3. SYNONYMS - phosphatidic acid-36:3 SYNONYMS - PA-36:3 SYNONYMS - PA36:3 // UNIQUE-ID - Phosphatidates-36-4 TYPES - L-PHOSPHATIDATE COMMON-NAME - phosphatidate-36:4 COMMENT - In this group of phosphatidates, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 36, and the total number of double bonds in the two acyl groups adds up to 4. SYNONYMS - phosphatidic acid-36:4 SYNONYMS - PA-36:4 SYNONYMS - PA36:4 // UNIQUE-ID - Phosphatidates-36-5 TYPES - L-PHOSPHATIDATE COMMON-NAME - phosphatidate-36:5 COMMENT - In this group of phosphatidates, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 36, and the total number of double bonds in the two acyl groups adds up to 5. SYNONYMS - phosphatidic acid-36:5 SYNONYMS - PA-36:5 SYNONYMS - PA36:5 // UNIQUE-ID - Phosphatidates-36-6 TYPES - L-PHOSPHATIDATE COMMON-NAME - phosphatidate-36:6 COMMENT - In this group of phosphatidates, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 36, and the total number of double bonds in the two acyl groups adds up to 6. SYNONYMS - phosphatidic acid-36:6 SYNONYMS - PA-36:6 SYNONYMS - PA36:6 // UNIQUE-ID - Phosphatidylcholines-32-0 TYPES - PHOSPHATIDYLCHOLINE COMMON-NAME - phosphatidylcholine-32:0 COMMENT - In this group of Phosphatidylcholines, the length of the two acyl chains varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 32. SYNONYMS - PC-32:0 SYNONYMS - PC32:0 // UNIQUE-ID - Phosphatidylcholines-34-1 TYPES - PHOSPHATIDYLCHOLINE COMMON-NAME - phosphatidylcholine-34:1 COMMENT - In this group of Phosphatidylcholines, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 34, and the total number of double bonds in the two acyl groups adds up to 1. SYNONYMS - PC-34:1 SYNONYMS - PC34:1 // UNIQUE-ID - Phosphatidylcholines-34-2 TYPES - PHOSPHATIDYLCHOLINE COMMON-NAME - phosphatidylcholine-34:2 COMMENT - In this group of Phosphatidylcholines, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 34, and the total number of double bonds in the two acyl groups adds up to 2. SYNONYMS - PC-34:2 SYNONYMS - PC34:2 // UNIQUE-ID - Phosphatidylcholines-34-3 TYPES - PHOSPHATIDYLCHOLINE COMMON-NAME - phosphatidylcholine-34:3 COMMENT - In this group of Phosphatidylcholines, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 34, and the total number of double bonds in the two acyl groups adds up to 3. SYNONYMS - PC-34:3 SYNONYMS - PC34:3 // UNIQUE-ID - Phosphatidylcholines-34-4 TYPES - PHOSPHATIDYLCHOLINE COMMON-NAME - phosphatidylcholine-34:4 COMMENT - In this group of Phosphatidylcholines, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 34, and the total number of double bonds in the two acyl groups adds up to 4. SYNONYMS - PC-34:4 SYNONYMS - PC34:4 // UNIQUE-ID - Phosphatidylcholines-36-1 TYPES - PHOSPHATIDYLCHOLINE COMMON-NAME - phosphatidylcholine-36:1 COMMENT - In this group of Phosphatidylcholines, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 36, and the total number of double bonds in the two acyl groups adds up to 1. SYNONYMS - PC-36:1 SYNONYMS - PC36:1 // UNIQUE-ID - Phosphatidylcholines-36-2 TYPES - PHOSPHATIDYLCHOLINE COMMON-NAME - phosphatidylcholine-36:2 COMMENT - In this group of Phosphatidylcholines, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 36, and the total number of double bonds in the two acyl groups adds up to 2. SYNONYMS - PC-36:2 SYNONYMS - PC36:2 // UNIQUE-ID - Phosphatidylcholines-36-3 TYPES - PHOSPHATIDYLCHOLINE COMMON-NAME - phosphatidylcholine-36:3 COMMENT - In this group of Phosphatidylcholines, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 36, and the total number of double bonds in the two acyl groups adds up to 3. SYNONYMS - PC-36:3 SYNONYMS - PC36:3 // UNIQUE-ID - Phosphatidylcholines-36-4 TYPES - PHOSPHATIDYLCHOLINE COMMON-NAME - phosphatidylcholine-36:4 COMMENT - In this group of Phosphatidylcholines, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 36, and the total number of double bonds in the two acyl groups adds up to 4. SYNONYMS - PC-36:4 SYNONYMS - PC36:4 // UNIQUE-ID - Phosphatidylcholines-36-5 TYPES - PHOSPHATIDYLCHOLINE COMMON-NAME - phosphatidylcholine-36:5 COMMENT - In this group of Phosphatidylcholines, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 36, and the total number of double bonds in the two acyl groups adds up to 5. SYNONYMS - PC-36:5 SYNONYMS - PC36:5 // UNIQUE-ID - Phosphatidylcholines-36-6 TYPES - PHOSPHATIDYLCHOLINE COMMON-NAME - phosphatidylcholine-36:6 COMMENT - In this group of Phosphatidylcholines, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 36, and the total number of double bonds in the two acyl groups adds up to 6. SYNONYMS - PC-36:6 SYNONYMS - PC36:6 // UNIQUE-ID - Phosphatidylcholines-38-2 TYPES - PHOSPHATIDYLCHOLINE COMMON-NAME - phosphatidylcholine-38:2 COMMENT - In this group of Phosphatidylcholines, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 38, and the total number of double bonds in the two acyl groups adds up to 2. SYNONYMS - PC-38:2 SYNONYMS - PC38:2 // UNIQUE-ID - Phosphatidylcholines-38-3 TYPES - PHOSPHATIDYLCHOLINE COMMON-NAME - phosphatidylcholine-38:3 COMMENT - In this group of Phosphatidylcholines, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 38, and the total number of double bonds in the two acyl groups adds up to 3. SYNONYMS - PC-38:3 SYNONYMS - PC38:3 // UNIQUE-ID - Phosphatidylcholines-38-4 TYPES - PHOSPHATIDYLCHOLINE COMMON-NAME - phosphatidylcholine-38:4 COMMENT - In this group of Phosphatidylcholines, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 38, and the total number of double bonds in the two acyl groups adds up to 4. SYNONYMS - PC-38:4 SYNONYMS - PC38:4 // UNIQUE-ID - Phosphatidylcholines-38-5 TYPES - PHOSPHATIDYLCHOLINE COMMON-NAME - phosphatidylcholine-38:5 COMMENT - In this group of Phosphatidylcholines, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 38, and the total number of double bonds in the two acyl groups adds up to 5. SYNONYMS - PC-38:5 SYNONYMS - PC38:5 // UNIQUE-ID - Phosphatidylcholines-38-6 TYPES - PHOSPHATIDYLCHOLINE COMMON-NAME - phosphatidylcholine-38:6 COMMENT - In this group of Phosphatidylcholines, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 38, and the total number of double bonds in the two acyl groups adds up to 6. SYNONYMS - PC-38:6 SYNONYMS - PC38:6 // UNIQUE-ID - Phosphatidylcholines-40-2 TYPES - PHOSPHATIDYLCHOLINE COMMON-NAME - phosphatidylcholine-40:2 COMMENT - In this group of Phosphatidylcholines, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 40, and the total number of double bonds in the two acyl groups adds up to 2. SYNONYMS - PC-40:2 SYNONYMS - PC40:2 // UNIQUE-ID - Phosphatidylcholines-40-3 TYPES - PHOSPHATIDYLCHOLINE COMMON-NAME - phosphatidylcholine-40:3 COMMENT - In this group of Phosphatidylcholines, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 40, and the total number of double bonds in the two acyl groups adds up to 3. SYNONYMS - PC-40:3 SYNONYMS - PC40:3 // UNIQUE-ID - Phosphatidylcholines-40-4 TYPES - PHOSPHATIDYLCHOLINE COMMON-NAME - phosphatidylcholine-40:4 COMMENT - In this group of Phosphatidylcholines, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 40, and the total number of double bonds in the two acyl groups adds up to 4. SYNONYMS - PC-40:4 SYNONYMS - PC40:4 // UNIQUE-ID - Phosphatidylcholines-40-5 TYPES - PHOSPHATIDYLCHOLINE COMMON-NAME - phosphatidylcholine-40:5 COMMENT - In this group of Phosphatidylcholines, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 40, and the total number of double bonds in the two acyl groups adds up to 5. SYNONYMS - PC-40:5 SYNONYMS - PC40:5 // UNIQUE-ID - Di-trans-poly-cis-polyprenyl-PP TYPES - CIS-TRANS-POLYISOPRENYL-PP COMMON-NAME - a di-trans, poly-cis-polyisoprenyl diphosphate COMMENT - For polyisoprenols and polyisoprenyl phosphates nomenclature, see |FRAME: Polyisoprenoids|. // UNIQUE-ID - Mono-trans-poly-cis-polyprenyl-PP TYPES - CIS-TRANS-POLYISOPRENYL-PP COMMON-NAME - a mono-trans, poly-cis-polyisoprenyl diphosphate COMMENT - For polyisoprenols and polyisoprenyl phosphates nomenclature, see |FRAME: Polyisoprenoids|. // UNIQUE-ID - Rubbers TYPES - CIS-TRANS-POLYISOPRENYL-PP COMMON-NAME - rubber SYNONYMS - natural rubber SYNONYMS - cis-1,4-polyisoprene // UNIQUE-ID - Alpha-hydroxyphytoceramides TYPES - Phytoceramides COMMON-NAME - an α hydroxyphytoceramide // UNIQUE-ID - Sphinga-4-8-dienine-18-O-Ceramides TYPES - Phytoceramides COMMON-NAME - a sphinga-4,8-dienine-18:0, ceramide COMMENT - Compounds in this class are ceramides formed from /a saturated 18-carbon fatty acid (octadecanoate) /and the long chain base (LCB) /sphinga-(4,8)-dienine. They /have a molecular formula of /C36H69NO3. /In plants, /there is commonly a mixture of ceramides with /the double bond in the cis and trans /configuration at position 8 in the LCB, /whereas the double bond at the 4 position /is generally in the trans /configuration |CITS: [Lynch04]|. SYNONYMS - an octadecanoyl-4,8-sphingadienine SYNONYMS - a 4,8-sphingadienine-stearic acid SYNONYMS - an N-octadecanoyl-4,8-sphingadienine SYNONYMS - a 4,8-sphingadienine-octadecanoate SYNONYMS - a 4,8-sphingadienine-octadecanoic acid SYNONYMS - a 4,8-sphingadienine-18:0 SYNONYMS - an N-octadecanoyl-sphinga-4,8-dienine SYNONYMS - a 4,8-sphingadienine-18:0, ceramide // UNIQUE-ID - 4-Hydroxysphing-8-enine-20-1-Ceramides TYPES - Plant-Ceramides-IV COMMON-NAME - a 4-hydroxysphing-8-enine-20:1, ceramide COMMENT - In plants, there will often be a racemic mixture of molecules with cis and trans configurations /of the double bond at position 8 in the sphingenine |CITS: [Lynch04]|. The double bond in the /fatty acid will most likely be in the cis configuration and occur at C9 from the methyl end of the acid /|CITS: [12782146]|. SYNONYMS - 4-hydroxy-8-sphingenine-20:1, ceramide // UNIQUE-ID - 4-Hydroxysphing-8-enine-22-0-Ceramides TYPES - Plant-Ceramides-IV COMMON-NAME - a 4-hydroxysphing-8-enine-22:0, ceramide COMMENT - In plants, there will often be a racemic mixture of molecules with cis and trans /configurations of the double bond at position 8 in the sphingenine |CITS: [Lynch04]|. SYNONYMS - 4-hydroxy-8-sphingenine-22:0, ceramide SYNONYMS - 4-hydroxy-8-sphingenine-docosanoic acid, ceramide // UNIQUE-ID - 4-Hydroxysphing-8-enine-26-0-Ceramides TYPES - Plant-Ceramides-IV COMMON-NAME - a 4-hydroxysphing-8-enine-26:0, ceramide COMMENT - In plants, there will often be a racemic mixture of molecules with cis and trans /configurations of the double bond at position 8 in the sphingenine |CITS: [Lynch04]|. SYNONYMS - 4-hydroxy-8-sphingenine-26:0, ceramide SYNONYMS - 4-hydroxy-8-sphingenine-hexacosanoic acid, ceramide // UNIQUE-ID - 3-5-Dihydroxy-Flavanones TYPES - Hydroxyflavonones COMMON-NAME - a 3',5'-dihydroxy isoflavanone // UNIQUE-ID - 3-Hydroxy-Flavanones TYPES - Hydroxyflavonones COMMON-NAME - a 3' hydroxy flavanone // UNIQUE-ID - 3-Hydroxy-Flavonoids TYPES - Hydroxyflavonones COMMON-NAME - a 3'-hydroxy-flavonoid // UNIQUE-ID - Flavonol-3-B-D-Xylosyl-12-B-D-Glycoside TYPES - Flavonol-Derivatives COMMON-NAME - a flavonol 3-[β-D-xylosyl-(1->2)-β-D-glycoside] // UNIQUE-ID - Flavonol-3-O-6-O-Malonyl-B-D-Glu TYPES - Flavonol-Derivatives COMMON-NAME - a flavonol 3-O-(6-O-malonyl-β-D-glucoside) // UNIQUE-ID - Flavonol-3-O-Glu-16-Glu-7-O-Rhams TYPES - Flavonol-Derivatives COMMON-NAME - a flavonol-3-O-[D-glucopyranosyl(1->6)D-glucopyranoside]-7-O-L-rhamnopyranoside // UNIQUE-ID - Flavonol-3-O-Glucoside-7-O-Rhamnosides TYPES - Flavonol-Derivatives COMMON-NAME - a flavonol-3-O-glucoside-7-O-rhamnoside // UNIQUE-ID - Flavonol-3-O-Glycosides TYPES - Flavonol-Derivatives COMMON-NAME - a flavonol 3-O-glycoside // UNIQUE-ID - Flavonol-7-O-beta-D-glucosides TYPES - Flavonol-Derivatives COMMON-NAME - a flavonol-7-O-β-D-glucosides // UNIQUE-ID - 4R-Limonene-1-2-epoxides TYPES - Limonene-1-2-epoxides COMMON-NAME - a (4R)-limonene-1,2-epoxide SYNONYMS - 1,2-epoxymenth-8-ene // UNIQUE-ID - 4S-limonene-1-2-epoxides TYPES - Limonene-1-2-epoxides COMMON-NAME - a (4S)-limonene-1,2-epoxide SYNONYMS - 1,2-epoxymenth-8-ene // UNIQUE-ID - 3-Isopropenyl-4H-hexano-lactones TYPES - Monoterpene-Derivatives COMMON-NAME - a 3-isopropenyl-4-hydroxy-hexano-6-lactone SYNONYMS - a 7-hydroxy-4-isoprenyl-7-methyl-2-oxo-oxepanone SYNONYMS - a 7-hydroxy-4-isopropenyl-7-methyloxepan-2-one // UNIQUE-ID - Dihydrocarvones TYPES - Monoterpene-Derivatives COMMON-NAME - a dihydrocarvone // UNIQUE-ID - Monoterpenol-Acetate-Esters TYPES - Monoterpene-Derivatives COMMON-NAME - a monoterpenol acetate ester // UNIQUE-ID - Monoterpenyl-Diphosphates TYPES - Monoterpene-Derivatives COMMON-NAME - a monoterpenyl diphosphate // UNIQUE-ID - Apocarotenoids TYPES - carotenoids COMMON-NAME - an apocarotenoid // UNIQUE-ID - Carotenes TYPES - carotenoids COMMON-NAME - a carotene // UNIQUE-ID - Ketocarotenoids TYPES - carotenoids COMMON-NAME - a ketocarotenoid // UNIQUE-ID - Xanthophylls TYPES - carotenoids COMMON-NAME - a xanthophyll // UNIQUE-ID - PENICILLIN TYPES - Beta-Lactams COMMON-NAME - a penicillin // UNIQUE-ID - Kanamycins TYPES - Deoxystreptamine-Antib COMMON-NAME - a kanamycin COMMENT - kanamycin A R1 = NH2; R2 = OH / kanamycin B R1 = R2 = NH2 / kanamycin C R1 = OH; R2 = NH2 / kanamycin D R1 = NH2; R2 = OH (other monosaccharide residue glucose) / kanamycin X R1 = R2 = OH / /Class name: Antibiotic (a diglycosyl streptamine or diglycosyl cyclitol) / / // UNIQUE-ID - N3-Acetal-deoxystreptamine-antib TYPES - Deoxystreptamine-Antib COMMON-NAME - an N3'-acetyl-2-deoxystreptamine antibiotic // UNIQUE-ID - RubosCO-lysine TYPES - RUBISCO-LYSINE COMMON-NAME - a [ribulose-1,5-bisphosphate-carboxylase]-lysine // UNIQUE-ID - cis-delta11-3-hydroxymelissoyl-ACPs TYPES - BETA-HYDROXY-ACYL-ACPs COMMON-NAME - a cis-delta11-3-hydroxyC30:1-[acp] // UNIQUE-ID - cis-delta13-3-hydroxylacceroyl-ACPs TYPES - BETA-HYDROXY-ACYL-ACPs COMMON-NAME - a cis-delta13-3-hydroxyC32:1-[acp] // UNIQUE-ID - cis-delta15-3-hydroxygheddoyl-ACPs TYPES - BETA-HYDROXY-ACYL-ACPs COMMON-NAME - a cis-delta15-3-hydroxyC34:1-[acp] // UNIQUE-ID - cis-delta17-3-hydroxyC36-ACPs TYPES - BETA-HYDROXY-ACYL-ACPs COMMON-NAME - a cis-delta17-3-hydroxyC36:1-[acp] // UNIQUE-ID - cis-delta19-3-hydroxyC38-ACPs TYPES - BETA-HYDROXY-ACYL-ACPs COMMON-NAME - a cis-delta19-3-hydroxyC38:1-[acp] // UNIQUE-ID - cis-delta21-3-hydroxyC40-ACPs TYPES - BETA-HYDROXY-ACYL-ACPs COMMON-NAME - a cis-delta21-3-hydroxyC40:1-[acp] // UNIQUE-ID - cis-delta5-3-hydroxylignoceroyl-ACPs TYPES - BETA-HYDROXY-ACYL-ACPs COMMON-NAME - a cis-delta5-3-hydroxyC24:1-[acp] // UNIQUE-ID - cis-delta7-3-hydroxycerotoyl-ACPs TYPES - BETA-HYDROXY-ACYL-ACPs COMMON-NAME - a cis-delta7-3-hydroxyC26:1-[acp] // UNIQUE-ID - cis-delta9-3-hydroxymontanoyl-ACPs TYPES - BETA-HYDROXY-ACYL-ACPs COMMON-NAME - a cis-delta9-3-hydroxyC28:1-[acp] // UNIQUE-ID - cis-delta11-3-oxo-melissoyl-ACPs TYPES - BETA-KETO-ACYL-ACPs COMMON-NAME - a cis-delta11-3-oxo-C30:1-[acp] // UNIQUE-ID - cis-delta13-3-oxo-lacceroyl-ACPs TYPES - BETA-KETO-ACYL-ACPs COMMON-NAME - a cis-delta13-3-oxo-C32:1-[acp] // UNIQUE-ID - cis-delta15-3-oxo-gheddoyl-ACPs TYPES - BETA-KETO-ACYL-ACPs COMMON-NAME - a cis-delta15-3-oxo-C34:1-[acp] // UNIQUE-ID - cis-delta17-3-oxo-C36-ACPs TYPES - BETA-KETO-ACYL-ACPs COMMON-NAME - a cis-delta17-3-oxo-C36:1-[acp] // UNIQUE-ID - cis-delta19-3-oxo-C38-ACPs TYPES - BETA-KETO-ACYL-ACPs COMMON-NAME - a cis-delta19-3-oxo-C38:1-[acp] // UNIQUE-ID - cis-delta21-3-oxo-C40-ACPs TYPES - BETA-KETO-ACYL-ACPs COMMON-NAME - a cis-delta21-3-oxo-C40:1-[acp] // UNIQUE-ID - cis-delta5-3-oxo-lignoceroyl-ACPs TYPES - BETA-KETO-ACYL-ACPs COMMON-NAME - a cis-delta5-3-oxo-C24:1-[acp] // UNIQUE-ID - cis-delta7-3-oxo-cerotoyl-ACPs TYPES - BETA-KETO-ACYL-ACPs COMMON-NAME - a cis-delta7-3-oxo-C26:1-[acp] // UNIQUE-ID - cis-delta9-3-oxo-montanoyl-ACPs TYPES - BETA-KETO-ACYL-ACPs COMMON-NAME - a cis-delta9-3-oxo-C28:1-[acp] // UNIQUE-ID - 2-Hexadecenoyl-ACPs TYPES - TRANS-D2-ENOYL-ACP COMMON-NAME - a trans hexadecenoyl-[acp] // UNIQUE-ID - 2-Octenoyl-ACPs TYPES - TRANS-D2-ENOYL-ACP COMMON-NAME - a trans oct-2-enoyl-[acp] SYNONYMS - a trans-oct-2-enoyl-[acp] SYNONYMS - a trans-oct-2-enoyl-[acyl-carrier protein] SYNONYMS - (2E)-octenoyl-[acp] // UNIQUE-ID - cis-vaccen-2-enoyl-ACPs TYPES - TRANS-D2-ENOYL-ACP COMMON-NAME - a cis-vaccen-2-enoyl-[acp] // UNIQUE-ID - Crotonyl-ACPs TYPES - TRANS-D2-ENOYL-ACP COMMON-NAME - a crotonyl-[acp] // UNIQUE-ID - Dodec-2-enoyl-ACPs TYPES - TRANS-D2-ENOYL-ACP COMMON-NAME - a trans dodec-2-enoyl-[acp] // UNIQUE-ID - Hex-2-enoyl-ACPs TYPES - TRANS-D2-ENOYL-ACP COMMON-NAME - a trans hex-2-enoyl-[acp] // UNIQUE-ID - Octadec-2-enoyl-ACPs TYPES - TRANS-D2-ENOYL-ACP COMMON-NAME - a trans-octadec-2-enoyl-[acp] SYNONYMS - trans-2,3-stearoyl-[acp] // UNIQUE-ID - Petrosel-2-enoyl-ACPs TYPES - TRANS-D2-ENOYL-ACP COMMON-NAME - a petrosel-2-enoyl-[acp] // UNIQUE-ID - Tetradec-2-enoyl-ACPs TYPES - TRANS-D2-ENOYL-ACP COMMON-NAME - a trans tetradec-2-enoyl-[acp] // UNIQUE-ID - Trans-D2-decenoyl-ACPs TYPES - TRANS-D2-ENOYL-ACP COMMON-NAME - a trans-Δ2-decenoyl-[acp] // UNIQUE-ID - Trans-D2-hexacos-2-enoyl-ACPs TYPES - TRANS-D2-ENOYL-ACP COMMON-NAME - a trans-hexacos-2-enoyl-[acp] // UNIQUE-ID - trans-delta2-arachidoyl-ACPs TYPES - TRANS-D2-ENOYL-ACP COMMON-NAME - a trans-eicos-2-enoyl-[acp] // UNIQUE-ID - trans-delta2-behenoyl-ACPs TYPES - TRANS-D2-ENOYL-ACP COMMON-NAME - a trans-docos-2-enoyl-[acp] // UNIQUE-ID - trans-delta2-lignoceroyl-ACPs TYPES - TRANS-D2-ENOYL-ACP COMMON-NAME - a trans-tetracos-2-enoyl-[acp] // UNIQUE-ID - ASPARTYL-ASX-TRNAS TYPES - Charged-tRNAs COMMON-NAME - L-aspartyl-tRNAAsx // UNIQUE-ID - Charged-ALA-tRNAs TYPES - Charged-tRNAs COMMON-NAME - L-alanyl-tRNAala SYNONYMS - L-ALANYL-TRNA(ALA) // UNIQUE-ID - Charged-ARG-tRNAs TYPES - Charged-tRNAs COMMON-NAME - L-arginyl-tRNAarg SYNONYMS - L-ARGINYL-TRNA(ARG) // UNIQUE-ID - Charged-ASN-tRNAs TYPES - Charged-tRNAs COMMON-NAME - L-asparaginyl-tRNAasn SYNONYMS - L-ASPARAGINYL-TRNA(ASN) // UNIQUE-ID - Charged-CYS-tRNAs TYPES - Charged-tRNAs COMMON-NAME - L-cysteinyl-tRNAcys SYNONYMS - L-CYSTEINYL-TRNA(CYS) // UNIQUE-ID - Charged-fMET-tRNAs TYPES - Charged-tRNAs COMMON-NAME - an N-formyl-L-methionyl-tRNAmet SYNONYMS - N-formyl-L-methionylaminoacyl-tRNA SYNONYMS - N-FORMYL-L-METHIONYL-TRNA // UNIQUE-ID - Charged-GLN-tRNAs TYPES - Charged-tRNAs COMMON-NAME - L-glutaminyl-tRNAgln SYNONYMS - L-GLUTAMINYL-TRNA(GLN) // UNIQUE-ID - Charged-GLY-tRNAs TYPES - Charged-tRNAs COMMON-NAME - glycyl-tRNAgly SYNONYMS - GLYCYL-TRNA(GLY) // UNIQUE-ID - Charged-HIS-tRNAs TYPES - Charged-tRNAs COMMON-NAME - L-histidyl-tRNAhis SYNONYMS - L-HISTIDYL-TRNA(HIS) // UNIQUE-ID - Charged-ILE-tRNAs TYPES - Charged-tRNAs COMMON-NAME - L-isoleucyl-tRNAile SYNONYMS - L-ISOLEUCYL-TRNA(ILE) // UNIQUE-ID - Charged-LEU-tRNAs TYPES - Charged-tRNAs COMMON-NAME - L-leucyl-tRNAleu SYNONYMS - L-leucyl-tRNA SYNONYMS - L-LEUCYL-TRNA(LEU) // UNIQUE-ID - Charged-LYS-tRNAs TYPES - Charged-tRNAs COMMON-NAME - L-lysyl-tRNAlys SYNONYMS - L-Lysine-tRNA (Lys) SYNONYMS - L-LYSYL-TRNA SYNONYMS - L-LYSYL-TRNA(LYS) // UNIQUE-ID - Charged-MET-tRNAs TYPES - Charged-tRNAs COMMON-NAME - L-methionyl-tRNAmet SYNONYMS - L-METHIONYL-TRNA SYNONYMS - L-METHIONYL-TRNA(MET) // UNIQUE-ID - Charged-PHE-tRNAs TYPES - Charged-tRNAs COMMON-NAME - L-phenylalanyl-tRNAphe SYNONYMS - L-PHENYLALANYL-TRNA(PHE) // UNIQUE-ID - Charged-PRO-tRNAs TYPES - Charged-tRNAs COMMON-NAME - L-prolyl-tRNApro SYNONYMS - L-PROLYL-TRNA(PRO) // UNIQUE-ID - Charged-PYL-tRNAs TYPES - Charged-tRNAs COMMON-NAME - L-pyrrolysyl-tRNAPyl // UNIQUE-ID - Charged-SEC-tRNAs TYPES - Charged-tRNAs COMMON-NAME - L-selenocysteinyl-tRNAsec SYNONYMS - L-SELENOCYSTEINYL-TRNA(SER) // UNIQUE-ID - Charged-SER-tRNAs TYPES - Charged-tRNAs COMMON-NAME - L-seryl-tRNAser SYNONYMS - L-SERYL-TRNA(SER) // UNIQUE-ID - Charged-THR-tRNAs TYPES - Charged-tRNAs COMMON-NAME - L-threonyl-tRNAthr SYNONYMS - L-THREONYL-TRNA(THR) // UNIQUE-ID - Charged-TRP-tRNAs TYPES - Charged-tRNAs COMMON-NAME - L-tryptophanyl-tRNAtrp SYNONYMS - L-TRYPTOPHANYL-TRNA(TRP) // UNIQUE-ID - Charged-TYR-tRNAs TYPES - Charged-tRNAs COMMON-NAME - L-tyrosyl-tRNAtyr SYNONYMS - L-TYROSYL-TRNA(TYR) // UNIQUE-ID - Charged-VAL-tRNAs TYPES - Charged-tRNAs COMMON-NAME - L-valyl-tRNAval SYNONYMS - L-VALYL-TRNA(VAL) // UNIQUE-ID - GLUTAMYL-GLX-TRNAS TYPES - Charged-tRNAs COMMON-NAME - L-glutamyl-tRNAGlx // UNIQUE-ID - L-aspartyl-tRNAAsn TYPES - Charged-tRNAs COMMON-NAME - L-aspartyl-tRNAasn // UNIQUE-ID - L-methionyl-tRNAfmet TYPES - Charged-tRNAs COMMON-NAME - L-methionyl-tRNAfmet // UNIQUE-ID - L-SEP-tRNACys TYPES - Charged-tRNAs COMMON-NAME - O-phospho-L-seryl-tRNACys // UNIQUE-ID - L-seryl-SEC-tRNAs TYPES - Charged-tRNAs COMMON-NAME - L-seryl-tRNAsec // UNIQUE-ID - Lysyl-PYL-tRNAs TYPES - Charged-tRNAs COMMON-NAME - Lysyl-tRNApyl // UNIQUE-ID - N-formyl-L-methionyl-tRNAfmet TYPES - Charged-tRNAs COMMON-NAME - N-formyl-L-methionyl-tRNAfmet // UNIQUE-ID - O-phospho-L-seryl-tRNASecs TYPES - Phosphorylated-Charged-tRNAs COMMON-NAME - O-phospho-L-seryl-tRNASec SYNONYMS - O-phosphoseryl-tRNAsec SYNONYMS - Sep-tRNASec SYNONYMS - O-phosphoseryl-tRNA[Ser]Sec SYNONYMS - O-phosphoseryl-tRNA(Sec) // UNIQUE-ID - TYR-tRNA-Containing-2O-MeGuanosine TYPES - tRNA-Containing-2-O-Methylguanosine TYPES - TYR-tRNAs COMMON-NAME - tRNAtyr-containing-2'-O-methylguanosine // UNIQUE-ID - ASN-tRNAs TYPES - ASX-tRNAs COMMON-NAME - tRNAasn SYNONYMS - TRNA(ASN) // UNIQUE-ID - ASP-tRNAs TYPES - ASX-tRNAs COMMON-NAME - tRNAasp SYNONYMS - TRNA(ASP) // UNIQUE-ID - GLN-tRNAs TYPES - GLX-tRNAs COMMON-NAME - tRNAgln SYNONYMS - TRNA(GLN) // UNIQUE-ID - GLT-tRNAs TYPES - GLX-tRNAs COMMON-NAME - tRNAGlu SYNONYMS - TRNA(GLT) SYNONYMS - tRNAglt // UNIQUE-ID - Cytochromes-B561-Red TYPES - Cytochromes-B-Reduced COMMON-NAME - reduced cytochrome b561 SYNONYMS - a ferrocytochrome b561 SYNONYMS - ferrocytochrome b-561 // UNIQUE-ID - FERROCYTOCHROME-B1 TYPES - Cytochromes-B-Reduced COMMON-NAME - a ferrocytochrome b1 SYNONYMS - reduced cytochrome b1 SYNONYMS - cytochrome b1 reduced // UNIQUE-ID - FERRICYTOCHROME-B5 TYPES - Cytochromes-b5 COMMON-NAME - a ferricytochrome b5 SYNONYMS - an oxidized cytochrome b5 // UNIQUE-ID - FERROCYTOCHROME-B5 TYPES - Cytochromes-b5 COMMON-NAME - a ferrocytochrome b5 // UNIQUE-ID - Cytochromes-B561-Ox TYPES - Cytochromes-B561 COMMON-NAME - oxidized cytochrome b561 SYNONYMS - a ferricytochrome b561 SYNONYMS - ferricytochrome b-561 // UNIQUE-ID - Cytochromes-c3-Oxidized TYPES - Cytochromes-C-Oxidized COMMON-NAME - an oxidized cytochrome c3 SYNONYMS - a ferricytochrome c3 // UNIQUE-ID - Cytochromes-C552-Ox TYPES - Cytochromes-C-Oxidized COMMON-NAME - oxidized cytochrome c552 COMMENT - This compound class stands for oxidized Cytochrome C552 proteins. SYNONYMS - an oxidized cytochrome C552 protein // UNIQUE-ID - Oxidized-cytochromes-c2 TYPES - Cytochromes-C-Oxidized COMMON-NAME - an oxidized cytochrome c2 SYNONYMS - a ferricytochrome c2 // UNIQUE-ID - Oxidized-cytochromes-c553 TYPES - Cytochromes-C-Oxidized COMMON-NAME - an oxidized cytochrome c-553 SYNONYMS - a ferricytochrome c-553 // UNIQUE-ID - Cytochromes-c3-Reduced TYPES - Cytochromes-C-Reduced COMMON-NAME - a reduced cytochrome c3 SYNONYMS - a ferrocytochrome c3 // UNIQUE-ID - Cytochromes-C552-Red TYPES - Cytochromes-C-Reduced COMMON-NAME - reduced cytochrome c552 // UNIQUE-ID - Reduced-cytochromes-c2 TYPES - Cytochromes-C-Reduced COMMON-NAME - a reduced cytochrome c2 SYNONYMS - a ferrocytochrome c2 // UNIQUE-ID - Reduced-cytochromes-c553 TYPES - Cytochromes-C-Reduced COMMON-NAME - a reduced cytochrome c-553 SYNONYMS - a ferrocytochrome c-553 // UNIQUE-ID - GO:0004023 TYPES - GO:0004022 COMMON-NAME - alcohol dehydrogenase activity, metal ion-independent // UNIQUE-ID - GO:0004024 TYPES - GO:0004022 COMMON-NAME - alcohol dehydrogenase activity, zinc-dependent // UNIQUE-ID - GO:0004025 TYPES - GO:0004022 COMMON-NAME - alcohol dehydrogenase activity, iron-dependent // UNIQUE-ID - GO:0008106 TYPES - GO:0004033 COMMON-NAME - alcohol dehydrogenase (NADP+) activity SYNONYMS - aldehyde reductase (NADPH) activity SYNONYMS - aldehyde reductase (NADPH2) SYNONYMS - NADP-aldehyde reductase activity // UNIQUE-ID - GO:0004449 TYPES - GO:0004448 COMMON-NAME - isocitrate dehydrogenase (NAD+) activity SYNONYMS - isocitrate dehydrogenase (NAD) activity SYNONYMS - isocitrate:NAD+ oxidoreductase (decarboxylating) SYNONYMS - NAD dependent isocitrate dehydrogenase activity SYNONYMS - NAD isocitrate dehydrogenase activity SYNONYMS - NAD isocitric dehydrogenase activity SYNONYMS - NAD-linked isocitrate dehydrogenase activity SYNONYMS - NAD-specific isocitrate dehydrogenase activity SYNONYMS - nicotinamide adenine dinucleotide isocitrate dehydrogenase activity // UNIQUE-ID - GO:0004450 TYPES - GO:0004448 COMMON-NAME - isocitrate dehydrogenase (NADP+) activity SYNONYMS - dual-cofactor-specific isocitrate dehydrogenase activity SYNONYMS - isocitrate (NADP) dehydrogenase activity SYNONYMS - isocitrate (nicotinamide adenine dinucleotide phosphate) dehydrogenase activity SYNONYMS - isocitrate dehydrogenase (NADP) activity SYNONYMS - isocitrate dehydrogenase (NADP-dependent) activity SYNONYMS - isocitrate:NADP+ oxidoreductase (decarboxylating) SYNONYMS - NADP isocitric dehydrogenase activity SYNONYMS - NADP(+)-ICDH activity SYNONYMS - NADP(+)-IDH activity SYNONYMS - NADP(+)-linked isocitrate dehydrogenase activity SYNONYMS - NADP-dependent isocitrate dehydrogenase activity SYNONYMS - NADP-dependent isocitric dehydrogenase activity SYNONYMS - NADP-linked isocitrate dehydrogenase activity SYNONYMS - NADP-specific isocitrate dehydrogenase activity SYNONYMS - triphosphopyridine nucleotide-linked isocitrate dehydrogenase- activity // UNIQUE-ID - GO:0004319 TYPES - GO:0004312 TYPES - GO:0016631 COMMON-NAME - enoyl-[acyl-carrier-protein] reductase (NADPH, B-specific) activity SYNONYMS - acyl-acyl-carrier-protein:NADP+ oxidoreductase (B-specific) SYNONYMS - enoyl acyl-carrier-protein reductase activity SYNONYMS - enoyl-[acyl-carrier protein] reductase (NADPH, B-specific) activity SYNONYMS - enoyl-ACP reductase (NADPH, B-specific) activity SYNONYMS - enoyl-acyl-carrier-protein reductase (NADPH, B-specific) SYNONYMS - enoyl-acyl-carrier-protein reductase (NADPH2, B-specific) SYNONYMS - NADPH 2-enoyl Co A reductase activity SYNONYMS - reductase, enoyl-acyl carrier protein (reduced nicotinamide adenine dinucleotide phosphate) // UNIQUE-ID - GO:0016402 TYPES - GO:0003997 COMMON-NAME - pristanoyl-CoA oxidase activity // UNIQUE-ID - GO:0008445 TYPES - GO:0015922 COMMON-NAME - D-aspartate oxidase activity SYNONYMS - aspartic oxidase activity SYNONYMS - D-aspartate:oxygen oxidoreductase (deaminating) SYNONYMS - D-aspartic oxidase activity // UNIQUE-ID - GO:0004488 TYPES - GO:0004486 COMMON-NAME - methylenetetrahydrofolate dehydrogenase (NADP+) activity SYNONYMS - 5,10-methylenetetrahydrofolate:NADP oxidoreductase activity SYNONYMS - 5,10-methylenetetrahydrofolate:NADP+ oxidoreductase activity // UNIQUE-ID - GO:0008137 TYPES - GO:0050136 COMMON-NAME - NADH dehydrogenase (ubiquinone) activity SYNONYMS - coenzyme Q reductase activity SYNONYMS - complex 1 dehydrogenase activity SYNONYMS - complex I (electron transport chain) activity SYNONYMS - complex I (mitochondrial electron transport) activity SYNONYMS - complex I (NADH:Q1 oxidoreductase) activity SYNONYMS - dihydronicotinamide adenine dinucleotide-coenzyme Q reductase activity SYNONYMS - DPNH-coenzyme Q reductase activity SYNONYMS - DPNH-ubiquinone reductase activity SYNONYMS - electron transfer complex I activity SYNONYMS - mitochondrial electron transport complex 1 activity SYNONYMS - mitochondrial electron transport complex I activity SYNONYMS - NADH coenzyme Q1 reductase activity SYNONYMS - NADH-coenzyme Q oxidoreductase activity SYNONYMS - NADH-coenzyme Q reductase activity SYNONYMS - NADH-CoQ oxidoreductase activity SYNONYMS - NADH-CoQ reductase activity SYNONYMS - NADH-Q6 oxidoreductase activity SYNONYMS - NADH-ubiquinone oxidoreductase activity SYNONYMS - NADH-ubiquinone reductase activity SYNONYMS - NADH-ubiquinone-1 reductase activity SYNONYMS - NADH:ubiquinone oxidoreductase activity SYNONYMS - NADH:ubiquinone oxidoreductase complex activity SYNONYMS - reduced nicotinamide adenine dinucleotide-coenzyme Q reductase activity SYNONYMS - type 1 dehydrogenase activity SYNONYMS - ubiquinone reductase activity // UNIQUE-ID - GO:0008750 TYPES - GO:0008746 COMMON-NAME - NAD(P)+ transhydrogenase (AB-specific) activity SYNONYMS - NAD(P) transhydrogenase (AB-specific) activity SYNONYMS - NADPH:NAD+ oxidoreductase (AB-specific) SYNONYMS - pyridine nucleotide transhydrogenase activity SYNONYMS - transhydrogenase activity // UNIQUE-ID - GO:0016971 TYPES - GO:0016972 COMMON-NAME - flavin-linked sulfhydryl oxidase activity // UNIQUE-ID - GO:0019798 TYPES - GO:0031543 COMMON-NAME - procollagen-proline dioxygenase activity // UNIQUE-ID - GO:0031544 TYPES - GO:0031543 COMMON-NAME - peptidyl-proline 3-dioxygenase activity // UNIQUE-ID - GO:0031545 TYPES - GO:0031543 COMMON-NAME - peptidyl-proline 4-dioxygenase activity SYNONYMS - HIF-type prolyl 4-hydroxylase SYNONYMS - prolyl 4-hydroxylase // UNIQUE-ID - GO:0016742 TYPES - GO:0004372 COMMON-NAME - hydroxymethyl-, formyl- and related transferase activity // UNIQUE-ID - GO:0030580 TYPES - GO:0008169 COMMON-NAME - quinone cofactor methyltransferase activity // UNIQUE-ID - GO:0004482 TYPES - GO:0008170 TYPES - GO:0008174 COMMON-NAME - mRNA (guanine-N7-)-methyltransferase activity SYNONYMS - guanine-7-methyltransferase activity SYNONYMS - messenger ribonucleate guanine 7-methyltransferase activity SYNONYMS - messenger RNA guanine 7-methyltransferase activity SYNONYMS - S-adenosyl-L-methionine:mRNA (guanine-7-N-)-methyltransferase activity SYNONYMS - S-adenosyl-L-methionine:mRNA (guanine-N7-)-methyltransferase activity // UNIQUE-ID - GO:0004603 TYPES - GO:0008170 TYPES - GO:0008757 COMMON-NAME - phenylethanolamine N-methyltransferase activity // UNIQUE-ID - GO:0004809 TYPES - GO:0008170 TYPES - GO:0016423 COMMON-NAME - tRNA (guanine-N2-)-methyltransferase activity SYNONYMS - guanine-N2-methylase activity SYNONYMS - N(2),N(2)-dimethylguanine tRNA methyltransferase activity SYNONYMS - N2,N2-dimethylguanine tRNA methyltransferase activity SYNONYMS - S-adenosyl-L-methionine:tRNA (guanine-2-N-)-methyltransferase activity SYNONYMS - S-adenosyl-L-methionine:tRNA (guanine-N2-)-methyltransferase activity SYNONYMS - transfer ribonucleate guanine 2-methyltransferase activity SYNONYMS - transfer ribonucleate guanine N2-methyltransferase activity SYNONYMS - transfer RNA guanine 2-methyltransferase activity SYNONYMS - tRNA 2,2-dimethylguanosine-26 methyltransferase activity SYNONYMS - tRNA(guanine-26,N(2)-N(2)) methyltransferase activity SYNONYMS - tRNA(guanine-26,N2-N2) methyltransferase activity SYNONYMS - tRNA(m(2,2)G26)dimethyltransferase activity // UNIQUE-ID - GO:0016273 TYPES - GO:0008170 TYPES - GO:0008757 COMMON-NAME - arginine N-methyltransferase activity // UNIQUE-ID - GO:0016278 TYPES - GO:0008170 TYPES - GO:0008757 COMMON-NAME - lysine N-methyltransferase activity // UNIQUE-ID - GO:0017174 TYPES - GO:0008170 TYPES - GO:0008757 COMMON-NAME - glycine N-methyltransferase activity SYNONYMS - glycine methyltransferase activity SYNONYMS - GNMT SYNONYMS - S-adenosyl-L-methionine:glycine methyltransferase activity SYNONYMS - S-adenosyl-L-methionine:glycine N-methyltransferase activity // UNIQUE-ID - GO:0016279 TYPES - GO:0008276 TYPES - GO:0016278 COMMON-NAME - protein-lysine N-methyltransferase activity // UNIQUE-ID - GO:0016206 TYPES - GO:0008171 TYPES - GO:0008757 COMMON-NAME - catechol O-methyltransferase activity SYNONYMS - catechol methyltransferase activity SYNONYMS - catecholamine O-methyltransferase activity SYNONYMS - COMT I SYNONYMS - COMT II SYNONYMS - MB-COMT (membrane-bound form of catechol-O-methyltransferase) SYNONYMS - S-adenosyl-L-methionine:catechol O-methyltransferase activity SYNONYMS - S-COMT (soluble form of catechol-O-methyltransferase) // UNIQUE-ID - GO:0003908 TYPES - GO:0008172 COMMON-NAME - methylated-DNA-[protein]-cysteine S-methyltransferase activity COMMENT - Consider also annotating to the molecular function term 'damaged DNA binding ; GO:0003684'. SYNONYMS - 6-O-methylguanine-DNA methyltransferase activity SYNONYMS - DNA-6-O-methylguanine:[protein]-L-cysteine S-methyltransferase activity SYNONYMS - DNA-6-O-methylguanine:protein-L-cysteine S-methyltransferase activity SYNONYMS - methylated-DNA-protein-cysteine S-methyltransferase activity SYNONYMS - MGMT SYNONYMS - O-6-methylguanine-DNA-alkyltransferase activity SYNONYMS - O6-alkylguanine-DNA alkyltransferase // UNIQUE-ID - GO:0008705 TYPES - GO:0008172 TYPES - GO:0042084 COMMON-NAME - methionine synthase activity SYNONYMS - 5-methyltetrahydrofolate--homocysteine S-methyltransferase activity SYNONYMS - 5-methyltetrahydrofolate--homocysteine transmethylase activity SYNONYMS - 5-methyltetrahydrofolate-homocysteine S-methyltransferase activity SYNONYMS - 5-methyltetrahydrofolate:L-homocysteine S-methyltransferase activity SYNONYMS - B12 N(5)-methyltetrahydrofolate homocysteine methyltransferase activity SYNONYMS - B12 N5-methyltetrahydrofolate homocysteine methyltransferase activity SYNONYMS - cobalamin-dependent methionine synthase activity SYNONYMS - MetH SYNONYMS - methionine synthase (cobalamin-dependent) activity SYNONYMS - methyltetrahydrofolate--homocysteine vitamin B12 methyltransferase activity SYNONYMS - N(5)-methyltetrahydrofolate methyltransferase activity SYNONYMS - N(5)-methyltetrahydrofolate--homocysteine cobalamin methyltransferase activity SYNONYMS - N(5)-methyltetrahydrofolic--homocysteine vitamin B12 transmethylase activity SYNONYMS - N-methyltetrahydrofolate:L-homocysteine methyltransferase activity SYNONYMS - N5-methyltetrahydrofolate methyltransferase activity SYNONYMS - N5-methyltetrahydrofolate-homocysteine cobalamin methyltransferase activity SYNONYMS - N5-methyltetrahydrofolic-homocysteine vitamin B12 transmethylase activity SYNONYMS - tetrahydrofolate methyltransferase activity SYNONYMS - tetrahydropteroylglutamate methyltransferase activity SYNONYMS - tetrahydropteroylglutamic methyltransferase activity SYNONYMS - vitamin B12 methyltransferase activity // UNIQUE-ID - GO:0008174 TYPES - GO:0008173 TYPES - GO:0008757 COMMON-NAME - mRNA methyltransferase activity // UNIQUE-ID - GO:0008175 TYPES - GO:0008173 COMMON-NAME - tRNA methyltransferase activity // UNIQUE-ID - GO:0008649 TYPES - GO:0008173 TYPES - GO:0008757 COMMON-NAME - rRNA methyltransferase activity // UNIQUE-ID - GO:0016423 TYPES - GO:0008175 TYPES - GO:0008757 COMMON-NAME - tRNA (guanine) methyltransferase activity // UNIQUE-ID - GO:0016426 TYPES - GO:0008175 TYPES - GO:0008757 COMMON-NAME - tRNA (adenine)-methyltransferase activity // UNIQUE-ID - GO:0016427 TYPES - GO:0008175 TYPES - GO:0008757 COMMON-NAME - tRNA (cytosine)-methyltransferase activity // UNIQUE-ID - GO:0042054 TYPES - GO:0008276 COMMON-NAME - histone methyltransferase activity // UNIQUE-ID - GO:0003886 TYPES - GO:0008757 TYPES - GO:0009008 COMMON-NAME - DNA (cytosine-5-)-methyltransferase activity COMMENT - Note that the enzyme DNA (cytosine-5-)-methyltransferase also has the activity represented by the molecular function term 'site-specific DNA-methyltransferase (cytosine-specific) activity ; GO:0008326'. SYNONYMS - cytosine 5-methyltransferase activity SYNONYMS - cytosine DNA methylase activity SYNONYMS - cytosine DNA methyltransferase activity SYNONYMS - cytosine-specific DNA methyltransferase activity SYNONYMS - deoxyribonucleic (cytosine-5-)-methyltransferase activity SYNONYMS - deoxyribonucleic acid (cytosine-5-)-methyltransferase activity SYNONYMS - deoxyribonucleic methylase activity SYNONYMS - DNA 5-cytosine methylase activity SYNONYMS - DNA cytosine C(5) methylase activity SYNONYMS - DNA cytosine c5 methylase activity SYNONYMS - DNA cytosine C5 methylase activity SYNONYMS - DNA cytosine methylase activity SYNONYMS - DNA-cytosine 5-methylase activity SYNONYMS - DNA-cytosine methyltransferase activity SYNONYMS - methylphosphotriester-DNA methyltransferase activity SYNONYMS - modification methylase activity SYNONYMS - restriction-modification system activity SYNONYMS - S-adenosyl-L-methionine:DNA (cytosine-5-)-methyltransferase activity SYNONYMS - type II DNA methylase activity // UNIQUE-ID - GO:0030731 TYPES - GO:0008757 COMMON-NAME - guanidinoacetate N-methyltransferase activity SYNONYMS - GA methylpherase activity SYNONYMS - guanidinoacetate methyltransferase activity SYNONYMS - guanidinoacetate transmethylase activity SYNONYMS - guanidoacetate methyltransferase activity SYNONYMS - methionine-guanidinoacetic transmethylase activity SYNONYMS - S-adenosyl-L-methionine:N-guanidinoacetate methyltransferase activity // UNIQUE-ID - GO:0030748 TYPES - GO:0008757 COMMON-NAME - amine N-methyltransferase activity SYNONYMS - arylamine N-methyltransferase activity SYNONYMS - nicotine N-methyltransferase activity SYNONYMS - S-adenosyl-L-methionine:amine N-methyltransferase activity SYNONYMS - tryptamine methyltransferase SYNONYMS - tryptamine N-methyltransferase activity // UNIQUE-ID - GO:0030791 TYPES - GO:0008757 COMMON-NAME - arsenite methyltransferase activity COMMENT - Note that the enzyme arsenite methyltransferase also has methylarsonite methyltransferase activity (GO:0030792). SYNONYMS - S-adenosyl-L-methionine:arsenic(III) methyltransferase activity SYNONYMS - S-adenosyl-L-methionine:arsenite As-methyltransferase activity SYNONYMS - S-adenosyl-L-methionine:methylarsonite As-methyltransferase activity // UNIQUE-ID - GO:0004312 TYPES - GO:0008415 COMMON-NAME - fatty-acid synthase activity SYNONYMS - acyl-CoA:malonyl-CoA C-acyltransferase (decarboxylating, oxoacyl- and enoyl-reducing and thioester-hydrolysing) // UNIQUE-ID - GO:0008374 TYPES - GO:0008415 COMMON-NAME - O-acyltransferase activity // UNIQUE-ID - GO:0016407 TYPES - GO:0008415 COMMON-NAME - acetyltransferase activity SYNONYMS - acetylase activity // UNIQUE-ID - GO:0016408 TYPES - GO:0008415 COMMON-NAME - C-acyltransferase activity // UNIQUE-ID - GO:0016409 TYPES - GO:0008415 COMMON-NAME - palmitoyltransferase activity // UNIQUE-ID - GO:0016410 TYPES - GO:0008415 COMMON-NAME - N-acyltransferase activity // UNIQUE-ID - GO:0016415 TYPES - GO:0008415 COMMON-NAME - octanoyltransferase activity // UNIQUE-ID - GO:0016417 TYPES - GO:0008415 COMMON-NAME - S-acyltransferase activity // UNIQUE-ID - GO:0016420 TYPES - GO:0008415 COMMON-NAME - malonyltransferase activity // UNIQUE-ID - GO:0004317 TYPES - GO:0004312 TYPES - GO:0019171 COMMON-NAME - 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity SYNONYMS - (3R)-3-hydroxypalmitoyl-[acyl-carrier-protein] hydro-lyase activity SYNONYMS - (3R)-3-hydroxypalmitoyl-acyl-carrier-protein hydro-lyase (hexadec-2-enoyl-acyl-carrier protein-forming) SYNONYMS - (3R)-3-hydroxypalmitoyl-acyl-carrier-protein hydro-lyase activity SYNONYMS - 3-hydroxypalmitoyl-[acyl-carrier protein] dehydratase activity SYNONYMS - 3-hydroxypalmitoyl-ACP dehydratase activity SYNONYMS - 3-hydroxypalmitoyl-acyl-carrier-protein dehydratase activity SYNONYMS - beta-hydroxypalmitoyl thioester dehydratase activity SYNONYMS - beta-hydroxypalmitoyl-acyl carrier protein dehydrase activity SYNONYMS - beta-hydroxypalmityl-ACP dehydrase activity SYNONYMS - D-3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity SYNONYMS - D-3-hydroxypalmitoyl-acyl-carrier-protein dehydratase activity // UNIQUE-ID - GO:0004320 TYPES - GO:0016297 COMMON-NAME - oleoyl-[acyl-carrier-protein] hydrolase activity SYNONYMS - oleoyl-[acyl-carrier protein] hydrolase activity SYNONYMS - oleoyl-ACP hydrolase activity SYNONYMS - oleoyl-ACP thioesterase activity SYNONYMS - oleoyl-acyl carrier protein thioesterase activity SYNONYMS - oleoyl-acyl-carrier-protein hydrolase // UNIQUE-ID - GO:0008917 TYPES - GO:0008375 COMMON-NAME - lipopolysaccharide N-acetylglucosaminyltransferase activity SYNONYMS - LPS N-acetylglucosaminyltransferase activity SYNONYMS - UDP-N-acetyl-D-glucosamine:lipopolysaccharide N-acetyl-D-glucosaminyltransferase activity SYNONYMS - UDP-N-acetylglucosamine-lipopolysaccharide N-acetylglucosaminyltransferase activity SYNONYMS - uridine diphosphoacetylglucosamine-lipopolysaccharide acetylglucosaminyltransferase activity // UNIQUE-ID - GO:0016262 TYPES - GO:0008375 COMMON-NAME - protein N-acetylglucosaminyltransferase activity SYNONYMS - N-GlcNAc transferase activity SYNONYMS - O-GlcNAc transferase activity SYNONYMS - UDP-N-acetyl-D-glucosamine:protein beta-N-acetyl-D-glucosaminyl-transferase activity SYNONYMS - uridine diphospho-N-acetylglucosamine:polypeptide beta-N-acetylglucosaminyltransferase activity SYNONYMS - uridine diphosphoacetylglucosamine-protein acetylglucosaminyltransferase activity // UNIQUE-ID - GO:0017176 TYPES - GO:0008375 COMMON-NAME - phosphatidylinositol N-acetylglucosaminyltransferase activity SYNONYMS - UDP-N-acetyl-D-glucosamine:1-phosphatidyl-1D-myo-inositol 6-(N-acetyl-alpha-D-glucosaminyl)transferase activity SYNONYMS - UDP-N-acetyl-D-glucosamine:phosphatidylinositol N-acetyl-D-glucosaminyltransferase activity SYNONYMS - uridine diphosphoacetylglucosamine alpha-1,6-acetyl-D-glucosaminyltransferase activity SYNONYMS - uridine diphosphoacetylglucosamine alpha1,6-acetyl-D-glucosaminyltransferase activity // UNIQUE-ID - GO:0030144 TYPES - GO:0008375 COMMON-NAME - alpha-1,6-mannosyl-glycoprotein 6-beta-N-acetylglucosaminyltransferase activity SYNONYMS - alpha-1,3(6)-mannosylglycoprotein beta-1,6-N-acetylglucosaminyltransferase activity SYNONYMS - alpha-mannoside beta-1,6-N-acetylglucosaminyltransferase activity SYNONYMS - GnTV activity SYNONYMS - N-acetylglucosaminyltransferase V activity SYNONYMS - UDP-N-acetyl-D-glucosamine:6-[2-(N-acetyl-beta-D-glucosaminyl)-alpha-D-mannosyl]-glycoprotein 6-beta-N-acetyl-D-glucosaminyltransferase activity SYNONYMS - UDP-N-acetylglucosamine:alpha-mannoside-beta-1,6 N-acetylglucosaminyltransferase activity SYNONYMS - UDP-N-acetylglucosamine:alpha-mannoside-beta1,6 N-acetylglucosaminyltransferase activity SYNONYMS - uridine diphosphoacetylglucosamine-alpha-mannoside beta-1->6-acetylglucosaminyltransferase activity SYNONYMS - uridine diphosphoacetylglucosamine-alpha-mannoside beta1->6-acetylglucosaminyltransferase activity // UNIQUE-ID - GO:0047223 TYPES - GO:0008375 COMMON-NAME - beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,3-N-acetylglucosaminyltransferase activity SYNONYMS - elongation 3-beta-GalNAc-transferase activity SYNONYMS - elongation 3beta-GalNAc-transferase activity SYNONYMS - O-glycosyl-oligosaccharide-glycoprotein N-acetylglucosaminyltransferase II activity SYNONYMS - UDP-N-acetyl-D-glucosamine:O-glycosyl-glycoprotein (N-acetyl-D-glucosamine to -D-galactose of beta-D-galactosyl-1,3-(N-acetyl-D-glucosaminyl-1,6)-N-acetyl-D-galactosaminyl-R) beta-1,3-N-acetyl-D-glucosaminyltransferase activity SYNONYMS - uridine diphosphoacetylglucosamine-mucin beta(1->3)-acetylglucosaminyltransferase (elongating) // UNIQUE-ID - GO:0050508 TYPES - GO:0008375 COMMON-NAME - glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase activity SYNONYMS - alpha-N-acetylglucosaminyltransferase II activity SYNONYMS - glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-a-N-acetylglucosaminyltransferase activity SYNONYMS - glucuronyl-N-acetylglucosaminylproteoglycan alpha-1,4-N-acetylglucosaminyltransferase activity SYNONYMS - UDP-N-acetyl-D-glucosamine:beta-D-glucuronosyl-(1->4)-N-acetyl-alpha-D-glucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase activity // UNIQUE-ID - GO:0047237 TYPES - GO:0008376 COMMON-NAME - glucuronylgalactosylproteoglycan 4-beta-N-acetylgalactosaminyltransferase activity SYNONYMS - glucuronylgalactosylproteoglycan beta-1,4-N-acetylgalactosaminyltransferase activity SYNONYMS - N-acetylgalactosaminyltransferase I activity SYNONYMS - UDP-N-acetyl-D-galactosamine:D-glucuronyl-1,3-beta-D-galactosyl-proteoglycan beta-1,4-N-acetylgalactosaminyltransferase activity SYNONYMS - uridine diphosphoacetylgalactosamine-chondroitin acetylgalactosaminyltransferase I SYNONYMS - uridine diphosphoacetylgalactosamine-chondroitinacetylgalactosaminyltransferase I activity // UNIQUE-ID - GO:0047238 TYPES - GO:0008376 COMMON-NAME - glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity SYNONYMS - chondroitin synthase activity SYNONYMS - glucuronyl-N-acetylgalactosaminylproteoglycan 4-beta-N-acetylgalactosaminyltransferase activity SYNONYMS - glucuronyl-N-acetylgalactosaminylproteoglycan beta-1,4-N-acetylgalactosaminyltransferase activity SYNONYMS - N-acetylgalactosaminyltransferase II activity SYNONYMS - UDP-N-acetyl-D-galactosamine:beta-D-glucuronosyl-(1->3)-N-acetyl-beta-D-galactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity SYNONYMS - UDP-N-acetyl-D-galactosamine:D-glucuronyl-N-acetyl-1,3-beta-D-galactosaminylproteoglycan beta-1,4-N-acetylgalactosaminyltransferase activity SYNONYMS - uridine diphosphoacetylgalactosamine-chondroitin acetylgalactosaminyltransferase II activity // UNIQUE-ID - GO:0047273 TYPES - GO:0008376 COMMON-NAME - galactosylgalactosylglucosylceramide beta-D-acetylgalactosaminyltransferase activity SYNONYMS - beta-3GalNAc-T1 activity SYNONYMS - beta3GalNAc-T1 SYNONYMS - galactosylgalactosylglucosylceramide beta-D- activity SYNONYMS - globoside synthase activity SYNONYMS - globoside synthetase activity SYNONYMS - globotriaosylceramide 3-beta-N-acetylgalactosaminyltransferase activity SYNONYMS - globotriosylceramide beta-1,6-N-acetylgalactosaminyltransferase activity SYNONYMS - UDP-N-acetyl-D-galactosamine:alpha-D-galactosyl-(1->4)-beta-D-galactosyl-(1->4)-beta-D-glucosylceramide 3III-beta-N-acetyl-D-galactosaminyltransferase activity SYNONYMS - UDP-N-acetyl-D-galactosamine:D-galactosyl-1,4-D-galactosyl-1,4-D-glucosylceramide beta-N-acetyl-D-galactosaminyltransferase activity SYNONYMS - UDP-N-acetylgalactosamine:globotriaosylceramide beta-3-N-acetylgalactosaminyltransferase activity SYNONYMS - UDP-N-acetylgalactosamine:globotriaosylceramide beta1,3-N-acetylgalactosaminyltransferase activity SYNONYMS - uridine diphosphoacetylgalactosamine-galactosylgalactosylglucosylceramide acetylgalactosaminyltransferase activity // UNIQUE-ID - GO:0047277 TYPES - GO:0008376 COMMON-NAME - globoside alpha-N-acetylgalactosaminyltransferase activity SYNONYMS - Forssman synthase activity SYNONYMS - forssman synthase activity SYNONYMS - globoside acetylgalactosaminyltransferase activity SYNONYMS - UDP-N-acetyl-D-galactosamine:N-acetyl-D-galactosaminyl-1,3-D-galactosyl-1,4-D-galactosyl-1,4-D-glucosylceramide alpha-N-acetyl-D-galactosaminyltransferase activity SYNONYMS - uridine diphosphoacetylgalactosamine-globoside alpha-acetylgalactosaminyltransferase activity // UNIQUE-ID - GO:0015018 TYPES - GO:0015020 COMMON-NAME - galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity SYNONYMS - glucuronosyltransferase I activity SYNONYMS - UDP-glucuronate:3-beta-D-galactosyl-4-beta-D-galactosyl-O-beta-D-xylosyl-protein D-glucuronosyltransferase activity SYNONYMS - UDPglucuronate:3-beta-D-galactosyl-4-beta-D-galactosyl-O-beta-D-xylosyl-protein D-glucuronosyltransferase activity SYNONYMS - uridine diphosphate glucuronic acid:acceptor glucuronosyltransferase activity // UNIQUE-ID - GO:0050509 TYPES - GO:0015020 COMMON-NAME - N-acetylglucosaminyl-proteoglycan 4-beta-glucuronosyltransferase activity SYNONYMS - heparan glucuronyltransferase II activity SYNONYMS - N-acetylglucosaminyl-proteoglycan 4-b-glucuronosyltransferase activity SYNONYMS - N-acetylglucosaminylproteoglycan beta-1,4-glucuronyltransferase activity SYNONYMS - UDP-alpha-D-glucuronate:N-acetyl-alpha-D-glucosaminyl-(1->4)-beta-D-glucuronosyl-proteoglycan 4-beta-glucuronosyltransferase activity // UNIQUE-ID - GO:0050510 TYPES - GO:0015020 COMMON-NAME - N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase activity SYNONYMS - alpha-D-glucuronate:N-acetyl-beta-D-galactosaminyl-(1->4)-beta-D-glucuronosyl-proteoglycan 3-beta-glucuronosyltransferase activity SYNONYMS - chondroitin glucuronyltransferase II activity SYNONYMS - N-acetylgalactosaminyl-proteoglycan 3-b-glucuronosyltransferase activity // UNIQUE-ID - GO:0003945 TYPES - GO:0035250 COMMON-NAME - N-acetyllactosamine synthase activity SYNONYMS - acetyllactosamine synthetase activity SYNONYMS - beta-1,4-galactosyltransferase activity SYNONYMS - beta-N-acetylglucosaminide beta1-4-galactosyltransferase activity SYNONYMS - beta1-4-galactosyltransferase activity SYNONYMS - beta1-4GalT SYNONYMS - Gal-T SYNONYMS - lactosamine synthase activity SYNONYMS - lactosamine synthetase activity SYNONYMS - lactose synthetase A protein SYNONYMS - N-acetylglucosamine (beta-1,4)galactosyltransferase activity SYNONYMS - N-acetylglucosamine (beta1,4)galactosyltransferase activity SYNONYMS - N-acetyllactosamine synthetase activity SYNONYMS - NAL synthetase activity SYNONYMS - UDP-beta-1,4-galactosyltransferase activity SYNONYMS - UDP-Gal:N-acetylglucosamine beta1-4-galactosyltransferase activity SYNONYMS - UDP-galactose N-acetylglucosamine beta-4-galactosyltransferase activity SYNONYMS - UDP-galactose-acetylglucosamine galactosyltransferase activity SYNONYMS - UDP-galactose-N-acetylglucosamine beta-1,4-galactosyltransferase activity SYNONYMS - UDP-galactose-N-acetylglucosamine beta-D-galactosyltransferase activity SYNONYMS - UDP-galactose-N-acetylglucosamine galactosyltransferase activity SYNONYMS - UDP-galactose:N-acetyl-D-glucosamine 4-beta-D-galactosyltransferase activity SYNONYMS - UDP-galactose:N-acetylglucosaminide beta1-4-galactosyltransferase activity SYNONYMS - UDPgalactose-N-acetylglucosamine beta-D-galactosyltransferase activity SYNONYMS - UDPgalactose:N-acetyl-D-glucosamine 4-beta-D-galactosyltransferase activity SYNONYMS - UDPgalactose:N-acetylglucosaminyl(beta1-4)galactosyltransferase activity SYNONYMS - uridine diphosphogalactose-acetylglucosamine galactosyltransferase activity // UNIQUE-ID - GO:0004381 TYPES - GO:0035250 COMMON-NAME - fucosylgalactoside 3-alpha-galactosyltransferase activity SYNONYMS - [blood group substance] alpha-galactosyltransferase activity SYNONYMS - B transferase activity SYNONYMS - blood-group substance B-dependent galactosyltransferase activity SYNONYMS - blood-group substance beta-dependent galactosyltransferase activity SYNONYMS - fucosylglycoprotein 3-alpha-galactosyltransferase activity SYNONYMS - glycoprotein-fucosylgalactoside alpha-galactosyltransferase activity SYNONYMS - histo-blood group B transferase activity SYNONYMS - histo-blood substance B-dependent galactosyltransferase activity SYNONYMS - histo-blood substance beta-dependent galactosyltransferase activity SYNONYMS - UDP-galactose:alpha-L-fucosyl-(1->2)-D-galactoside 3-alpha-D-galactosyltransferase activity SYNONYMS - UDPgalactose:alpha-L-fucosyl-(1->2)-D-galactoside 3-alpha-D-galactosyltransferase activity SYNONYMS - UDPgalactose:glycoprotein-alpha-L-fucosyl-(1,2)-D-galactose 3-alpha-D-galactosyltransferase activity SYNONYMS - UDPgalactose:O-alpha-L-fucosyl(1->2)D-galactose alpha-D-galactosyltransferase activity // UNIQUE-ID - GO:0004461 TYPES - GO:0035250 COMMON-NAME - lactose synthase activity SYNONYMS - lactose synthetase activity SYNONYMS - UDP-galactose-glucose galactosyltransferase activity SYNONYMS - UDP-galactose:D-glucose 4-beta-D-galactotransferase activity SYNONYMS - UDPgalactose-glucose galactosyltransferase activity SYNONYMS - UDPgalactose:D-glucose 4-beta-D-galactotransferase activity SYNONYMS - uridine diphosphogalactose-glucose galactosyltransferase activity // UNIQUE-ID - GO:0008499 TYPES - GO:0035250 TYPES - GO:0048531 COMMON-NAME - UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity SYNONYMS - beta-1,3-GalTase activity SYNONYMS - beta3Gal-Ts activity SYNONYMS - UDP-Gal:beta-GlcNAc beta-1,3-galactosyltransferase activity SYNONYMS - UDP-galactose beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity // UNIQUE-ID - GO:0046525 TYPES - GO:0035250 COMMON-NAME - xylosylprotein 4-beta-galactosyltransferase activity SYNONYMS - galactosyltransferase I activity SYNONYMS - UDP-D-galactose:D-xylose galactosyltransferase activity SYNONYMS - UDP-D-galactose:xylose galactosyltransferase activity SYNONYMS - UDP-galactose:O-beta-D-xylosylprotein 4-beta-D-galactosyltransferase activity SYNONYMS - UDP-galactose:xylose galactosyltransferase activity SYNONYMS - UDPgalactose:O-beta-D-xylosylprotein 4-beta-D-galactosyltransferase activity SYNONYMS - uridine diphosphogalactose-xylose galactosyltransferase activity // UNIQUE-ID - GO:0047220 TYPES - GO:0035250 COMMON-NAME - galactosylxylosylprotein 3-beta-galactosyltransferase activity SYNONYMS - galactosyltransferase II activity SYNONYMS - UDP-galactose:4-beta-D-galactosyl-O-beta-D-xylosylprotein 3-beta-D-galactosyltransferase activity SYNONYMS - UDPgalactose:4-beta-D-galactosyl-O-beta-D-xylosylprotein 3-beta-D-galactosyltransferase activity SYNONYMS - uridine diphosphogalactose-galactosylxylose galactosyltransferase activity // UNIQUE-ID - GO:0047276 TYPES - GO:0035250 COMMON-NAME - N-acetyllactosaminide 3-alpha-galactosyltransferase activity SYNONYMS - alpha-galactosyltransferase activity SYNONYMS - beta-D-galactosyl-N-acetylglucosaminylglycopeptide alpha-1,3-galactosyltransferase activity SYNONYMS - beta-galactosyl-N-acetylglucosaminylglycopeptide alpha-1,3-galactosyltransferase activity SYNONYMS - glucosaminylglycopeptide alpha-1,3-galactosyltransferase activity SYNONYMS - N-acetyllactosaminide alpha-1,3-galactosyltransferase activity SYNONYMS - UDP-Gal:beta-D-Gal(1,4)-D-GlcNAc alpha(1,3)-galactosyltransferase activity SYNONYMS - UDP-Gal:beta-D-Gal(1,4)-D-GlcNAc alpha-(1,3)-galactosyltransferase activity SYNONYMS - UDP-Gal:Gal-beta-1->4GlcNAc-R alpha-1->3-galactosyltransferase activity SYNONYMS - UDP-Gal:Galbeta1->4GlcNAc-R alpha1->3-galactosyltransferase activity SYNONYMS - UDP-Gal:N-acetyllactosaminide alpha(1,3)-galactosyltransferase activity SYNONYMS - UDP-Gal:N-acetyllactosaminide alpha-(1,3)-galactosyltransferase activity SYNONYMS - UDP-Gal:N-acetyllactosaminide alpha-1,3-D-galactosyltransferase activity SYNONYMS - UDP-galactose-acetyllactosamine alpha-D-galactosyltransferase activity SYNONYMS - UDP-galactose:N-acetyllactosaminide 3-alpha-D-galactosyltransferase activity SYNONYMS - UDPgalactose:beta-D-galactosyl-beta-1,4-N-acetyl-D-glucosaminyl-glycopeptide alpha-1,3-D-galactosyltransferase activity SYNONYMS - uridine diphosphogalactose-acetyllactosamine alpha-1->3-galactosyltransferase activity SYNONYMS - uridine diphosphogalactose-acetyllactosamine alpha1->3-galactosyltransferase activity SYNONYMS - uridine diphosphogalactose-acetyllactosamine galactosyltransferase activity SYNONYMS - uridine diphosphogalactose-galactosylacetylglucosaminylgalactosyl-glucosylceramide galactosyltransferase activity SYNONYMS - uridine diphosphogalactose-galactosylacetylglucosaminylgalactosylglucosylceramide galactosyltransferase activity // UNIQUE-ID - GO:0047915 TYPES - GO:0035250 COMMON-NAME - ganglioside galactosyltransferase activity SYNONYMS - GM1-synthase activity SYNONYMS - UDP galactose-LAC Tet-ceramide alpha-galactosyltransferase activity SYNONYMS - UDP-galactose-GM2 galactosyltransferase activity SYNONYMS - UDP-galactose-GM2 ganglioside galactosyltransferase activity SYNONYMS - UDP-galactose:N-acetyl-D-galactosaminyl-(N-acetylneuraminyl)-D-galactosyl-D-glucosyl-N-acylsphingosine beta-1,3-D-galactosyltransferase activity SYNONYMS - UDP-galactose:N-acetylgalactosaminyl-(N-acetylneuraminyl) galactosyl-glucosyl-ceramide galactosyltransferase activity SYNONYMS - UDPgalactose-ceramide galactosyltransferase activity SYNONYMS - UDPgalactose:N-acetyl-D-galactosaminyl-(N-acetylneuraminyl)-D-galactosyl-D-glucosyl-N-acylsphingosine beta-1,3-D-galactosyltransferase activity SYNONYMS - uridine diphosphate D-galactose:glycolipid galactosyltransferase activity SYNONYMS - uridine diphosphogalactose-ceramide galactosyltransferase activity SYNONYMS - uridine diphosphogalactose-GM2 galactosyltransferase activity // UNIQUE-ID - GO:0050512 TYPES - GO:0035250 COMMON-NAME - lactosylceramide 4-alpha-galactosyltransferase activity SYNONYMS - Gal-beta-1-4Glc-beta-1-Cer alpha-1,4-galactosyltransferase activity SYNONYMS - galbeta1-4Glcbeta1-Cer alpha1,4-galactosyltransferase activity SYNONYMS - globotriaosylceramide/CD77 synthase activity SYNONYMS - histo-blood group P(k) UDP-galactose activity SYNONYMS - histo-blood group Pk UDP-galactose SYNONYMS - lactosylceramide 4-a-galactosyltransferase activity SYNONYMS - UDP-galactose:lactosylceramide 4II-alpha-D-galactosyltransferase activity // UNIQUE-ID - GO:0004373 TYPES - GO:0035251 COMMON-NAME - glycogen (starch) synthase activity SYNONYMS - glycogen (starch) synthetase activity SYNONYMS - UDP-glucose-glycogen glucosyltransferase activity SYNONYMS - UDP-glucose:glycogen 4-alpha-D-glucosyltransferase activity SYNONYMS - UDP-glycogen synthase activity SYNONYMS - UDPG-glycogen synthetase activity SYNONYMS - UDPG-glycogen transglucosylase activity SYNONYMS - UDPglucose:glycogen 4-alpha-D-glucosyltransferase activity SYNONYMS - uridine diphosphoglucose-glycogen glucosyltransferase activity // UNIQUE-ID - GO:0008120 TYPES - GO:0035251 COMMON-NAME - ceramide glucosyltransferase activity SYNONYMS - ceramide:UDP-glucose glucosyltransferase activity SYNONYMS - ceramide:UDPGlc glucosyltransferase activity SYNONYMS - glucosylceramide synthase activity SYNONYMS - UDP-glucose-ceramide glucosyltransferase activity SYNONYMS - UDP-glucose:ceramide glucosyltransferase activity SYNONYMS - UDP-glucose:N-acylsphingosine D-glucosyltransferase activity SYNONYMS - UDPglucose:N-acylsphingosine D-glucosyltransferase activity SYNONYMS - uridine diphosphoglucose-ceramide glucosyltransferase activity // UNIQUE-ID - GO:0030158 TYPES - GO:0035252 COMMON-NAME - protein xylosyltransferase activity SYNONYMS - peptide O-xylosyltransferase activity SYNONYMS - UDP-D-xylose:core protein beta-D-xylosyltransferase activity SYNONYMS - UDP-D-xylose:core protein xylosyltransferase activity SYNONYMS - UDP-D-xylose:protein beta-D-xylosyltransferase activity SYNONYMS - UDP-D-xylose:proteoglycan core protein beta-D-xylosyltransferase activity SYNONYMS - UDP-xylose-core protein beta-D-xylosyltransferase activity SYNONYMS - uridine diphosphoxylose-core protein beta-xylosyltransferase activity SYNONYMS - uridine diphosphoxylose-protein xylosyltransferase activity // UNIQUE-ID - GO:0004169 TYPES - GO:0000030 COMMON-NAME - dolichyl-phosphate-mannose-protein mannosyltransferase activity SYNONYMS - dolichol phosphomannose-protein mannosyltransferase activity SYNONYMS - dolichyl-phosphate-D-mannose:protein O-D-mannosyltransferase activity SYNONYMS - dolichyl-phosphate-mannose-protein O-mannosyltransferase activity SYNONYMS - O-glycoside mannosyltransferase SYNONYMS - protein O-D-mannosyltransferase activity SYNONYMS - protein O-mannosyltransferase activity // UNIQUE-ID - GO:0004582 TYPES - GO:0000030 COMMON-NAME - dolichyl-phosphate beta-D-mannosyltransferase activity SYNONYMS - dolichol phosphate mannose synthase activity SYNONYMS - dolichol-phosphate mannose synthase activity SYNONYMS - dolichol-phosphate mannosyltransferase activity SYNONYMS - dolichol-phosphate-mannose synthase activity SYNONYMS - dolichyl mannosyl phosphate synthase activity SYNONYMS - dolichyl phosphate mannosyltransferase activity SYNONYMS - dolichyl-phosphate mannose synthase activity SYNONYMS - dolichyl-phospho-mannose synthase activity SYNONYMS - DPM synthase activity SYNONYMS - GDP-mannose-dolichol phosphate mannosyltransferase activity SYNONYMS - GDP-mannose:dolichyl-phosphate beta-D-mannosyltransferase activity SYNONYMS - GDPMan:DolP mannosyltransferase activity SYNONYMS - GDPmannose-dolichylmonophosphate mannosyltransferase activity SYNONYMS - GDPmannose:dolichyl-phosphate mannosyltransferase activity SYNONYMS - guanosine diphosphomannose-dolichol phosphate mannosyltransferase activity SYNONYMS - mannosylphosphodolichol synthase activity SYNONYMS - mannosylphosphoryldolichol synthase activity // UNIQUE-ID - GO:0004579 TYPES - GO:0004576 COMMON-NAME - dolichyl-diphosphooligosaccharide-protein glycotransferase activity SYNONYMS - asparagine N-glycosyltransferase activity SYNONYMS - dolichyl-diphosphooligosaccharide-protein glycosyltransferase activity SYNONYMS - dolichyl-diphosphooligosaccharide:protein-L-asparagine oligopolysaccharidotransferase activity SYNONYMS - dolichyldiphosphooligosaccharide-protein glycosyltransferase activity SYNONYMS - dolichyldiphosphooligosaccharide-protein oligosaccharyltransferase activity SYNONYMS - dolichyldiphosphoryloligosaccharide-protein oligosaccharyltransferase activity SYNONYMS - dolichylpyrophosphodiacetylchitobiose-protein glycosyltransferase activity SYNONYMS - oligomannosyltransferase activity SYNONYMS - oligosaccharide transferase activity // UNIQUE-ID - GO:0008184 TYPES - GO:0004645 COMMON-NAME - glycogen phosphorylase activity // UNIQUE-ID - GO:0048531 TYPES - GO:0008378 COMMON-NAME - beta-1,3-galactosyltransferase activity // UNIQUE-ID - GO:0046921 TYPES - GO:0008417 COMMON-NAME - alpha(1,6)-fucosyltransferase activity // UNIQUE-ID - GO:0046922 TYPES - GO:0008417 COMMON-NAME - peptide-O-fucosyltransferase activity SYNONYMS - GDP-beta-L-fucose:polypeptide O-alpha-L-fucosyltransferase activity SYNONYMS - GDP-fucose protein O-fucosyltransferase activity SYNONYMS - GDP-fucose:polypeptide fucosyltransferase activity SYNONYMS - GDP-L-fucose:polypeptide fucosyltransferase activity // UNIQUE-ID - GO:0004310 TYPES - GO:0004311 COMMON-NAME - farnesyl-diphosphate farnesyltransferase activity SYNONYMS - farnesyl-diphosphate farnesyl transferase complex SYNONYMS - squalene synthase SYNONYMS - farnesyltransferase // UNIQUE-ID - GO:0004660 TYPES - GO:0008318 COMMON-NAME - protein farnesyltransferase activity SYNONYMS - CAAX farnesyltransferase activity SYNONYMS - farnesyl-diphosphate:protein-cysteine farnesyltransferase activity SYNONYMS - FTase activity SYNONYMS - protein-cysteine farnesyltransferase activity // UNIQUE-ID - GO:0004661 TYPES - GO:0008318 COMMON-NAME - protein geranylgeranyltransferase activity SYNONYMS - protein-cysteine geranylgeranyltransferase activity // UNIQUE-ID - GO:0004838 TYPES - GO:0070547 COMMON-NAME - L-tyrosine:2-oxoglutarate aminotransferase activity SYNONYMS - glutamic phenylpyruvic aminotransferase activity SYNONYMS - glutamic-hydroxyphenylpyruvic transaminase activity SYNONYMS - L-phenylalanine 2-oxoglutarate aminotransferase activity SYNONYMS - L-tyrosine aminotransferase activity SYNONYMS - L-tyrosine:2-oxoglutarate aminotransferase activity SYNONYMS - phenylalanine aminotransferase activity SYNONYMS - phenylalanine transaminase activity SYNONYMS - phenylalanine-alpha-ketoglutarate transaminase activity SYNONYMS - phenylpyruvate transaminase activity SYNONYMS - phenylpyruvic acid transaminase activity SYNONYMS - TyrAT activity SYNONYMS - tyrosine aminotransferase activity SYNONYMS - tyrosine-2-ketoglutarate aminotransferase activity SYNONYMS - tyrosine-alpha-ketoglutarate aminotransferase activity SYNONYMS - tyrosine-alpha-ketoglutarate transaminase activity // UNIQUE-ID - GO:0001729 TYPES - GO:0001727 COMMON-NAME - ceramide kinase activity SYNONYMS - acylsphingosine kinase activity SYNONYMS - ATP:ceramide 1-phosphotransferase activity // UNIQUE-ID - GO:0016308 TYPES - GO:0016307 COMMON-NAME - 1-phosphatidylinositol-4-phosphate 5-kinase activity SYNONYMS - 1-phosphatidylinositol-4-phosphate kinase activity SYNONYMS - 1-phosphatidylinositol-4-phosphate kinase, class IA SYNONYMS - 1-phosphatidylinositol-4-phosphate kinase, class IB SYNONYMS - ATP:1-phosphatidyl-1D-myo-inositol-4-phosphate 5-phosphotransferase activity SYNONYMS - diphosphoinositide kinase activity SYNONYMS - phosphatidylinositol 4-phosphate kinase activity SYNONYMS - phosphatidylinositol-4-phosphate 5-kinase activity SYNONYMS - PIP kinase activity SYNONYMS - PIP5K SYNONYMS - PtdIns(4)P-5-kinase activity SYNONYMS - type I PIP kinase activity // UNIQUE-ID - GO:0035005 TYPES - GO:0016307 TYPES - GO:0035004 COMMON-NAME - phosphatidylinositol-4-phosphate 3-kinase activity SYNONYMS - ATP:1-phosphatidyl-1D-myo-inositol-4-phosphate 3-phosphotransferase activity SYNONYMS - C2-domain-containing phosphoinositide 3-kinase activity SYNONYMS - phosphatidylinositol 3-kinase activity, class I SYNONYMS - phosphatidylinositol 3-kinase activity, class II SYNONYMS - phosphatidylinositol 3-kinase, class I, catalyst activity SYNONYMS - type II phosphoinositide 3-kinase activity // UNIQUE-ID - GO:0016303 TYPES - GO:0035004 COMMON-NAME - 1-phosphatidylinositol-3-kinase activity SYNONYMS - 1-phosphatidylinositol 3-kinase activity SYNONYMS - ATP:1-phosphatidyl-1D-myo-inositol 3-phosphotransferase activity SYNONYMS - phosphatidylinositol 3-kinase activity SYNONYMS - phosphatidylinositol 3-kinase activity, class I SYNONYMS - phosphatidylinositol 3-kinase activity, class II SYNONYMS - phosphatidylinositol 3-kinase activity, class III SYNONYMS - phosphatidylinositol 3-kinase, class I, catalyst activity SYNONYMS - PI3-kinase activity SYNONYMS - PI3K SYNONYMS - PtdIns-3-kinase activity SYNONYMS - type I phosphatidylinositol kinase activity SYNONYMS - type III phosphoinositide 3-kinase activity SYNONYMS - Vps34p // UNIQUE-ID - GO:0046934 TYPES - GO:0035004 COMMON-NAME - phosphatidylinositol-4,5-bisphosphate 3-kinase activity SYNONYMS - ATP:1-phosphatidyl-1D-myo-inositol-4,5-bisphosphate 3-phosphotransferase activity SYNONYMS - phosphatidylinositol 3-kinase activity, class I SYNONYMS - phosphatidylinositol 3-kinase activity, class II SYNONYMS - phosphatidylinositol 3-kinase, class I, catalyst activity SYNONYMS - type I phosphoinositide 3-kinase activity // UNIQUE-ID - GO:0047325 TYPES - GO:0051765 COMMON-NAME - inositol tetrakisphosphate 1-kinase activity SYNONYMS - 1D-myo-inositol-tetrakisphosphate 1-kinase activity SYNONYMS - 1D-myo-inositol-trisphosphate 5-kinase activity SYNONYMS - 1D-myo-inositol-trisphosphate 6-kinase activity SYNONYMS - ATP:1D-myo-inositol-1,3,4-trisphosphate 5-phosphotransferase activity SYNONYMS - ATP:1D-myo-inositol-1,3,4-trisphosphate 6-phosphotransferase activity SYNONYMS - ATP:1D-myo-inositol-3,4,5,6-tetrakisphosphate 1-phosphotransferase activity SYNONYMS - inositol 3,4,5,6-tetrakisphosphate 1-kinase activity SYNONYMS - inositol-tetrakisphosphate 1-kinase activity SYNONYMS - inositol-trisphosphate 5-kinase activity SYNONYMS - inositol-trisphosphate 6-kinase activity // UNIQUE-ID - GO:0008440 TYPES - GO:0051766 COMMON-NAME - inositol trisphosphate 3-kinase activity SYNONYMS - 1D-myo-inositol-trisphosphate 3-kinase activity SYNONYMS - ATP:1D-myo-inositol-1,4,5-trisphosphate 3-phosphotransferase activity SYNONYMS - inositol 1,4,5-trisphosphate 3-kinase activity SYNONYMS - inositol-trisphosphate 3-kinase activity SYNONYMS - ins(1,4,5)P(3) 3-kinase activity SYNONYMS - Ins(1,4,5)P3 3-kinase activity SYNONYMS - IP3 3-kinase activity SYNONYMS - IP3K activity // UNIQUE-ID - GO:0004674 TYPES - GO:0004672 COMMON-NAME - protein serine/threonine kinase activity SYNONYMS - A-kinase activity SYNONYMS - AP50 kinase activity SYNONYMS - ATP-protein transphosphorylase activity SYNONYMS - ATP:protein phosphotransferase (non-specific) activity SYNONYMS - betaIIPKC SYNONYMS - calcium-dependent protein kinase C activity SYNONYMS - calcium/phospholipid-dependent protein kinase activity SYNONYMS - casein kinase (phosphorylating) activity SYNONYMS - cytidine 3',5'-cyclic monophosphate-responsive protein kinase activity SYNONYMS - dsk1 SYNONYMS - epsilon PKC SYNONYMS - glycogen synthase a kinase activity SYNONYMS - glycogen synthase A kinase activity SYNONYMS - glycogen synthase kinase activity SYNONYMS - HIPK2 SYNONYMS - Hpr kinase activity SYNONYMS - hydroxyalkyl-protein kinase activity SYNONYMS - M phase-specific cdc2 kinase activity SYNONYMS - MAPK SYNONYMS - mitogen-activated protein kinase activity SYNONYMS - mitogen-activated S6 kinase activity SYNONYMS - non-specific serine/threonine protein kinase activity SYNONYMS - p82 kinase activity SYNONYMS - phosphorylase B kinase kinase activity SYNONYMS - phosphorylase b kinase kinase activity SYNONYMS - PKA SYNONYMS - PKC SYNONYMS - protein glutamyl kinase activity SYNONYMS - protein kinase (phosphorylating) activity SYNONYMS - protein kinase A activity SYNONYMS - protein kinase p58 activity SYNONYMS - protein phosphokinase activity SYNONYMS - protein serine kinase activity SYNONYMS - protein serine-threonine kinase activity SYNONYMS - protein-aspartyl kinase activity SYNONYMS - protein-cysteine kinase activity SYNONYMS - protein-serine kinase activity SYNONYMS - Prp4 protein kinase activity SYNONYMS - Raf kinase activity SYNONYMS - Raf-1 SYNONYMS - ribosomal protein S6 kinase II activity SYNONYMS - ribosomal S6 protein kinase activity SYNONYMS - serine kinase activity SYNONYMS - serine protein kinase activity SYNONYMS - serine(threonine) protein kinase activity SYNONYMS - serine-specific protein kinase activity SYNONYMS - serine/threonine protein kinase activity SYNONYMS - STK32 SYNONYMS - T-antigen kinase activity SYNONYMS - threonine-specific protein kinase activity SYNONYMS - twitchin kinase activity SYNONYMS - Wee 1-like kinase activity SYNONYMS - Wee-kinase activity SYNONYMS - WEE1Hu // UNIQUE-ID - GO:0004712 TYPES - GO:0004672 COMMON-NAME - protein serine/threonine/tyrosine kinase activity SYNONYMS - ADK1 SYNONYMS - Arabidopsis dual specificity kinase 1 activity SYNONYMS - ATP:protein phosphotransferase (Ser/Thr- and Tyr-phosphorylating) activity SYNONYMS - CLK1 SYNONYMS - dDYRK2 SYNONYMS - dual-specificity kinase activity SYNONYMS - dual-specificity protein kinase SYNONYMS - Mps1p SYNONYMS - protein threonine/tyrosine kinase activity // UNIQUE-ID - GO:0004713 TYPES - GO:0004672 COMMON-NAME - protein tyrosine kinase activity SYNONYMS - protein tyrosine kinase activity // UNIQUE-ID - GO:0047696 TYPES - GO:0004672 COMMON-NAME - beta-adrenergic receptor kinase activity SYNONYMS - [b-adrenergic-receptor] kinase activity SYNONYMS - ADRBK1 SYNONYMS - adrenergic receptor kinase activity SYNONYMS - ATP:beta-adrenergic-receptor phosphotransferase activity SYNONYMS - BARK1 SYNONYMS - beta-adrenergic receptor-specific kinase activity SYNONYMS - beta-adrenergic-receptor kinase (phosphorylating) activity SYNONYMS - beta-adrenergic-receptor kinase activity SYNONYMS - beta-adrenoceptor kinase 1 activity SYNONYMS - beta-adrenoceptor kinase 2 activity SYNONYMS - beta-adrenoceptor kinase activity SYNONYMS - beta-AR kinase activity SYNONYMS - beta-ARK SYNONYMS - beta-ARK 1 SYNONYMS - beta-ARK 2 SYNONYMS - beta-receptor kinase activity SYNONYMS - beta2ARK SYNONYMS - betaARK1 SYNONYMS - GRK2 SYNONYMS - GRK3 SYNONYMS - STK15 // UNIQUE-ID - GO:0050321 TYPES - GO:0004672 COMMON-NAME - tau-protein kinase activity SYNONYMS - [Tau protein] kinase activity SYNONYMS - ATP:tau-protein O-phosphotransferase activity SYNONYMS - brain protein kinase PK40erk activity SYNONYMS - cdk5/p20 SYNONYMS - CDK5/p23 SYNONYMS - glycogen synthase kinase-3beta activity SYNONYMS - GSK SYNONYMS - protein tau kinase activity SYNONYMS - STK31 SYNONYMS - tau kinase activity SYNONYMS - tau protein kinase activity SYNONYMS - tau-protein kinase I activity SYNONYMS - tau-protein kinase II activity SYNONYMS - tau-tubulin kinase activity SYNONYMS - TPK SYNONYMS - TPK I SYNONYMS - TPK II SYNONYMS - TTK // UNIQUE-ID - GO:0004698 TYPES - GO:0004697 COMMON-NAME - calcium-dependent protein kinase C activity SYNONYMS - calcium-dependent PKC activity // UNIQUE-ID - GO:0004699 TYPES - GO:0004697 COMMON-NAME - calcium-independent protein kinase C activity SYNONYMS - calcium-independent PKC activity // UNIQUE-ID - GO:0004700 TYPES - GO:0004697 COMMON-NAME - atypical protein kinase C activity SYNONYMS - atypical PKC activity // UNIQUE-ID - GO:0005024 TYPES - GO:0004675 COMMON-NAME - transforming growth factor beta receptor activity SYNONYMS - TGF-beta receptor activity SYNONYMS - TGFbeta receptor activity SYNONYMS - TGFbetaR // UNIQUE-ID - GO:0016909 TYPES - GO:0004707 COMMON-NAME - SAP kinase activity SYNONYMS - SAPK SYNONYMS - stress-activated kinase activity SYNONYMS - stress-activated protein kinase activity // UNIQUE-ID - GO:0004714 TYPES - GO:0004713 TYPES - GO:0019199 COMMON-NAME - transmembrane receptor protein tyrosine kinase activity SYNONYMS - AATK SYNONYMS - AATYK SYNONYMS - AATYK2 SYNONYMS - AATYK3 SYNONYMS - ACH SYNONYMS - ALK SYNONYMS - anaplastic lymphoma kinase activity SYNONYMS - ARK SYNONYMS - ATP:protein-L-tyrosine O-phosphotransferase (receptor-type) activity SYNONYMS - ATP:protein-tyrosine O-phosphotransferase activity SYNONYMS - AXL SYNONYMS - Bek SYNONYMS - bfgfr SYNONYMS - BRT SYNONYMS - Bsk SYNONYMS - C-FMS SYNONYMS - CAK SYNONYMS - CCK4 SYNONYMS - CD115 SYNONYMS - CD135 SYNONYMS - CDw135 SYNONYMS - Cek1 SYNONYMS - Cek10 SYNONYMS - Cek11 SYNONYMS - Cek2 SYNONYMS - Cek3 SYNONYMS - Cek5 SYNONYMS - Cek6 SYNONYMS - Cek7 SYNONYMS - CFD1 SYNONYMS - CKIT SYNONYMS - CSF1R SYNONYMS - DAlk SYNONYMS - DDR1 SYNONYMS - DDR2 SYNONYMS - Dek SYNONYMS - DKFZp434C1418 SYNONYMS - Drosophila Eph kinase activity SYNONYMS - DRT SYNONYMS - DTK SYNONYMS - Ebk SYNONYMS - ECK SYNONYMS - EDDR1 SYNONYMS - Eek SYNONYMS - EGFR SYNONYMS - Ehk2 SYNONYMS - Ehk3 SYNONYMS - Elk SYNONYMS - EPH SYNONYMS - EPHA1 SYNONYMS - EPHA2 SYNONYMS - EPHA6 SYNONYMS - EPHA7 SYNONYMS - EPHA8 SYNONYMS - EPHB1 SYNONYMS - EPHB2 SYNONYMS - EPHB3 SYNONYMS - EPHB4 SYNONYMS - EphB5 SYNONYMS - ephrin-B3 receptor tyrosine kinase activity SYNONYMS - EPHT SYNONYMS - EPHT2 SYNONYMS - EPHT3 SYNONYMS - EPHX SYNONYMS - ERBB SYNONYMS - ERBB1 SYNONYMS - ERBB2 SYNONYMS - ERBB3 SYNONYMS - ERBB4 SYNONYMS - ERK SYNONYMS - Eyk SYNONYMS - FGFR1 SYNONYMS - FGFR2 SYNONYMS - FGFR3 SYNONYMS - FGFR4 SYNONYMS - FLG SYNONYMS - FLK1 SYNONYMS - FLK2 SYNONYMS - FLT1 SYNONYMS - FLT2 SYNONYMS - FLT3 SYNONYMS - FLT4 SYNONYMS - FMS SYNONYMS - Fv2 SYNONYMS - HBGFR SYNONYMS - HEK11 SYNONYMS - HEK2 SYNONYMS - HEK3 SYNONYMS - HEK5 SYNONYMS - HEK6 SYNONYMS - HEP SYNONYMS - HER2 SYNONYMS - HER3 SYNONYMS - HER4 SYNONYMS - HGFR SYNONYMS - HSCR1 SYNONYMS - HTK SYNONYMS - IGF1R SYNONYMS - INSR SYNONYMS - INSRR SYNONYMS - insulin receptor protein-tyrosine kinase activity SYNONYMS - IR SYNONYMS - IRR SYNONYMS - JTK12 SYNONYMS - JTK13 SYNONYMS - JTK14 SYNONYMS - JWS SYNONYMS - K-SAM SYNONYMS - KDR SYNONYMS - KGFR SYNONYMS - KIA0641 SYNONYMS - KIAA1079 SYNONYMS - KIAA1459 SYNONYMS - Kil SYNONYMS - Kin15 SYNONYMS - Kin16 SYNONYMS - KIT SYNONYMS - KLG SYNONYMS - LTK SYNONYMS - MCF3 SYNONYMS - Mdk1 SYNONYMS - Mdk2 SYNONYMS - Mdk5 SYNONYMS - MEhk1 SYNONYMS - MEN2A/B SYNONYMS - Mep SYNONYMS - MER SYNONYMS - MERTK SYNONYMS - MET SYNONYMS - Mlk1 SYNONYMS - Mlk2 SYNONYMS - Mrk SYNONYMS - MST1R SYNONYMS - MTC1 SYNONYMS - MUSK SYNONYMS - Myk1 SYNONYMS - N-SAM SYNONYMS - NEP SYNONYMS - NET SYNONYMS - Neu SYNONYMS - neurite outgrowth regulating kinase activity SYNONYMS - neurotrophin TRK receptor activity SYNONYMS - neurotrophin TRKA receptor activity SYNONYMS - neurotrophin TRKB receptor activity SYNONYMS - neurotrophin TRKC receptor activity SYNONYMS - NGL SYNONYMS - NOK SYNONYMS - nork SYNONYMS - novel oncogene with kinase-domain activity SYNONYMS - Nsk2 SYNONYMS - NTRK1 SYNONYMS - NTRK2 SYNONYMS - NTRK3 SYNONYMS - NTRK4 SYNONYMS - NTRKR1 SYNONYMS - NTRKR2 SYNONYMS - NTRKR3 SYNONYMS - Nuk SYNONYMS - NYK SYNONYMS - PCL SYNONYMS - PDGFR SYNONYMS - PDGFRA SYNONYMS - PDGFRB SYNONYMS - PHB6 SYNONYMS - PTK SYNONYMS - PTK3 SYNONYMS - PTK7 SYNONYMS - receptor protein tyrosine kinase activity SYNONYMS - receptor protein-tyrosine kinase activity SYNONYMS - RET SYNONYMS - RON SYNONYMS - ROR1 SYNONYMS - ROR2 SYNONYMS - ROS1 SYNONYMS - RSE SYNONYMS - RTK SYNONYMS - RYK SYNONYMS - SEA SYNONYMS - Sek2 SYNONYMS - Sek3 SYNONYMS - Sek4 SYNONYMS - sevenless receptor activity SYNONYMS - Sfr SYNONYMS - SKY SYNONYMS - STK SYNONYMS - STK1 SYNONYMS - TEK SYNONYMS - TIE SYNONYMS - TIE1 SYNONYMS - TIE2 SYNONYMS - TIF SYNONYMS - TKT SYNONYMS - TRK SYNONYMS - TRKA SYNONYMS - TRKB SYNONYMS - TRKC SYNONYMS - TRKE SYNONYMS - TYK1 SYNONYMS - TYRO10 SYNONYMS - tyro11 SYNONYMS - TYRO3 SYNONYMS - tyro5 SYNONYMS - tyro6 SYNONYMS - TYRO7 SYNONYMS - UFO SYNONYMS - VEGFR1 SYNONYMS - VEGFR2 SYNONYMS - VEGFR3 SYNONYMS - Vik SYNONYMS - YK1 SYNONYMS - Yrk // UNIQUE-ID - GO:0045127 TYPES - GO:0019200 COMMON-NAME - N-acetylglucosamine kinase activity SYNONYMS - 2-acetylamino-2-deoxy-D-glucose kinase activity SYNONYMS - acetylaminodeoxyglucokinase activity SYNONYMS - acetylglucosamine kinase (phosphorylating) SYNONYMS - ATP:2-acetylamino-2-deoxy-D-glucose 6-phosphotransferase activity SYNONYMS - ATP:N-acetyl-D-glucosamine 6-phosphotransferase activity SYNONYMS - GlcNAc kinase activity // UNIQUE-ID - GO:0004340 TYPES - GO:0004396 COMMON-NAME - glucokinase activity SYNONYMS - ATP:D-glucose 6-phosphotransferase activity SYNONYMS - glucokinase (phosphorylating) SYNONYMS - glucose kinase activity // UNIQUE-ID - GO:0003872 TYPES - GO:0008443 COMMON-NAME - 6-phosphofructokinase activity SYNONYMS - 6-phosphofructokinase reduction SYNONYMS - 6-phosphofructose 1-kinase activity SYNONYMS - ATP-dependent phosphofructokinase activity SYNONYMS - ATP:D-fructose-6-phosphate 1-phosphotransferase activity SYNONYMS - D-fructose-6-phosphate 1-phosphotransferase activity SYNONYMS - fructose 6-phosphate kinase activity SYNONYMS - fructose 6-phosphokinase activity SYNONYMS - nucleotide triphosphate-dependent phosphofructokinase activity SYNONYMS - PFK SYNONYMS - phospho-1,6-fructokinase activity SYNONYMS - phosphofructokinase (phosphorylating) SYNONYMS - phosphofructokinase I activity SYNONYMS - phosphohexokinase activity // UNIQUE-ID - GO:0003873 TYPES - GO:0008443 COMMON-NAME - 6-phosphofructo-2-kinase activity SYNONYMS - 6-phosphofructo-2-kinase (phosphorylating) SYNONYMS - 6-phosphofructose 2-kinase activity SYNONYMS - ATP:beta-D-fructose-6-phosphate 2-phosphotransferase activity SYNONYMS - ATP:D-fructose-6-phosphate 2-phosphotransferase activity SYNONYMS - fructose 6-phosphate 2-kinase activity SYNONYMS - phosphofructokinase 2 activity // UNIQUE-ID - GO:0019201 TYPES - GO:0019205 COMMON-NAME - nucleotide kinase activity // UNIQUE-ID - GO:0019206 TYPES - GO:0019205 COMMON-NAME - nucleoside kinase activity // UNIQUE-ID - GO:0051733 TYPES - GO:0051731 COMMON-NAME - polydeoxyribonucleotide kinase activity SYNONYMS - DNA 5'-hydroxyl kinase activity SYNONYMS - DNA kinase activity // UNIQUE-ID - GO:0051734 TYPES - GO:0051731 COMMON-NAME - ATP-dependent polynucleotide kinase activity SYNONYMS - ATP-dependent polynucleotide 5'-hydroxyl-kinase activity SYNONYMS - ATP:5'-dephosphopolynucleotide 5'-phosphatase activity SYNONYMS - ATP:5'-dephosphopolynucleotide 5'-phosphotransferase activity // UNIQUE-ID - GO:0004484 TYPES - GO:0008192 COMMON-NAME - mRNA guanylyltransferase activity SYNONYMS - GTP--RNA guanylyltransferase activity SYNONYMS - GTP:mRNA guanylyltransferase activity SYNONYMS - messenger RNA guanylyltransferase activity SYNONYMS - mRNA capping enzyme activity SYNONYMS - protein lambda2 // UNIQUE-ID - GO:0003887 TYPES - GO:0034061 COMMON-NAME - DNA-directed DNA polymerase activity SYNONYMS - deoxynucleoside-triphosphate:DNA deoxynucleotidyltransferase (DNA-directed) activity SYNONYMS - deoxyribonucleic acid duplicase activity SYNONYMS - deoxyribonucleic duplicase activity SYNONYMS - deoxyribonucleic polymerase I SYNONYMS - DNA duplicase activity SYNONYMS - DNA nucleotidyltransferase (DNA-directed) activity SYNONYMS - DNA polymerase I SYNONYMS - DNA polymerase II SYNONYMS - DNA polymerase III SYNONYMS - DNA replicase activity SYNONYMS - DNA-dependent DNA polymerase activity SYNONYMS - duplicase SYNONYMS - Klenow fragment SYNONYMS - sequenase SYNONYMS - Taq DNA polymerase SYNONYMS - Taq Pol I SYNONYMS - Tca DNA polymerase // UNIQUE-ID - GO:0003964 TYPES - GO:0034061 COMMON-NAME - RNA-directed DNA polymerase activity SYNONYMS - deoxynucleoside-triphosphate:DNA deoxynucleotidyltransferase (RNA-directed) activity SYNONYMS - DNA nucleotidyltransferase (RNA-directed) activity SYNONYMS - reverse transcriptase activity SYNONYMS - revertase activity SYNONYMS - RNA revertase activity SYNONYMS - RNA-dependent deoxyribonucleate nucleotidyltransferase activity SYNONYMS - RNA-dependent DNA polymerase activity SYNONYMS - RNA-directed DNA polymerase, group II intron encoded SYNONYMS - RNA-directed DNA polymerase, transposon encoded SYNONYMS - RNA-instructed DNA polymerase activity SYNONYMS - RT // UNIQUE-ID - GO:0003899 TYPES - GO:0034062 COMMON-NAME - DNA-directed RNA polymerase activity SYNONYMS - C ribonucleic acid formation factors SYNONYMS - C RNA formation factors SYNONYMS - deoxyribonucleic acid-dependent ribonucleic acid polymerase activity SYNONYMS - DNA-dependent ribonucleate nucleotidyltransferase activity SYNONYMS - DNA-dependent RNA nucleotidyltransferase activity SYNONYMS - DNA-dependent RNA polymerase activity SYNONYMS - DNA-directed RNA polymerase I activity SYNONYMS - DNA-directed RNA polymerase II activity SYNONYMS - DNA-directed RNA polymerase III activity SYNONYMS - nucleoside-triphosphate:RNA nucleotidyltransferase (DNA-directed) activity SYNONYMS - RNA nucleotidyltransferase (DNA-directed) activity SYNONYMS - RNA polymerase I activity SYNONYMS - RNA polymerase II activity SYNONYMS - RNA polymerase III activity SYNONYMS - transcriptase // UNIQUE-ID - GO:0000309 TYPES - GO:0070566 COMMON-NAME - nicotinamide-nucleotide adenylyltransferase activity SYNONYMS - adenosine triphosphate-nicotinamide mononucleotide transadenylase activity SYNONYMS - ATP:nicotinamide-nucleotide adenylyltransferase activity SYNONYMS - ATP:NMN adenylyltransferase activity SYNONYMS - diphosphopyridine nucleotide pyrophosphorylase activity SYNONYMS - NAD(+) diphosphorylase activity SYNONYMS - NAD(+) pyrophosphorylase activity SYNONYMS - NAD+ diphosphorylase activity SYNONYMS - NAD+ pyrophosphorylase activity SYNONYMS - nicotinamide adenine dinucleotide pyrophosphorylase activity SYNONYMS - nicotinamide mononucleotide adenylyltransferase activity SYNONYMS - NMN adenylyltransferase activity SYNONYMS - NMNAT activity // UNIQUE-ID - GO:0004515 TYPES - GO:0070566 COMMON-NAME - nicotinate-nucleotide adenylyltransferase activity SYNONYMS - ATP:nicotinate-nucleotide adenylyltransferase activity SYNONYMS - ATP:nicotinate-ribonucleotide adenylyltransferase activity SYNONYMS - deamido-NAD(+) diphosphorylase activity SYNONYMS - deamido-NAD(+) pyrophosphorylase activity SYNONYMS - deamido-NAD+ pyrophosphorylase activity SYNONYMS - deamidonicotinamide adenine dinucleotide pyrophosphorylase activity SYNONYMS - NaMN-ATase activity SYNONYMS - nicotinate mononucleotide adenylyltransferase activity SYNONYMS - nicotinic acid mononucleotide adenylyltransferase // UNIQUE-ID - GO:0004595 TYPES - GO:0070566 COMMON-NAME - pantetheine-phosphate adenylyltransferase activity SYNONYMS - 3'-dephospho-CoA pyrophosphorylase activity SYNONYMS - ATP:pantetheine-4'-phosphate adenylyltransferase activity SYNONYMS - ATP:pantetheine-phosphate adenylyltransferase activity SYNONYMS - dephospho-CoA diphosphorylase activity SYNONYMS - dephospho-CoA pyrophosphorylase activity SYNONYMS - dephospho-coenzyme A pyrophosphorylase activity SYNONYMS - pantetheine phosphate adenylyltransferase activity SYNONYMS - phosphopantetheine adenylyltransferase activity SYNONYMS - PPAT activity // UNIQUE-ID - GO:0004652 TYPES - GO:0070566 COMMON-NAME - polynucleotide adenylyltransferase activity SYNONYMS - adenosine triphosphate:ribonucleic acid adenylyltransferase activity SYNONYMS - AMP polynucleotidylexotransferase activity SYNONYMS - ATP-polynucleotide adenylyltransferase activity SYNONYMS - ATP:polynucleotide adenylyltransferase activity SYNONYMS - ATP:polynucleotidylexotransferase activity SYNONYMS - NTP polymerase activity SYNONYMS - poly(A) hydrolase activity SYNONYMS - poly(A) polymerase activity SYNONYMS - poly(A) synthetase activity SYNONYMS - poly-A polymerase activity SYNONYMS - polyadenylate nucleotidyltransferase activity SYNONYMS - polyadenylate polymerase activity SYNONYMS - polyadenylate synthetase activity SYNONYMS - polyadenylic acid polymerase activity SYNONYMS - polyadenylic polymerase activity SYNONYMS - RNA adenylating enzyme activity SYNONYMS - RNA formation factors, PF1 SYNONYMS - terminal riboadenylate transferase activity // UNIQUE-ID - GO:0004779 TYPES - GO:0070566 COMMON-NAME - sulfate adenylyltransferase activity SYNONYMS - sulphate adenylyltransferase activity // UNIQUE-ID - GO:0004605 TYPES - GO:0070567 COMMON-NAME - phosphatidate cytidylyltransferase activity SYNONYMS - CDP diglyceride pyrophosphorylase activity SYNONYMS - CDP-DG SYNONYMS - CDP-diacylglyceride synthetase activity SYNONYMS - CDP-diacylglycerol synthase activity SYNONYMS - CDP-diglyceride diphosphorylase activity SYNONYMS - CDP-diglyceride pyrophosphorylase activity SYNONYMS - CDP-diglyceride synthase activity SYNONYMS - CDP-diglyceride synthetase activity SYNONYMS - CTP-diacylglycerol synthetase activity SYNONYMS - CTP:1,2-diacylglycerophosphate-cytidyl transferase activity SYNONYMS - CTP:phosphatidate cytidylyltransferase activity SYNONYMS - cytidine diphosphoglyceride pyrophosphorylase activity SYNONYMS - DAG synthetase activity SYNONYMS - phosphatidate cytidyltransferase activity SYNONYMS - phosphatidic acid cytidylyltransferase activity // UNIQUE-ID - GO:0008108 TYPES - GO:0070569 COMMON-NAME - UDP-glucose:hexose-1-phosphate uridylyltransferase activity SYNONYMS - Gal-1-P uridylyltransferase activity SYNONYMS - galactose-1-phosphate uridylyltransferase activity SYNONYMS - hexose 1-phosphate uridyltransferase activity SYNONYMS - hexose-1-phosphate uridylyltransferase activity SYNONYMS - UDP-glucose-hexose-1-phosphate uridylyltransferase activity SYNONYMS - UDP-glucose:alpha-D-galactose-1-phosphate uridylyltransferase activity SYNONYMS - UDPglucose-hexose-1-phosphate uridylyltransferase activity SYNONYMS - UDPglucose:alpha-D-galactose-1-phosphate uridylyltransferase activity SYNONYMS - uridyl transferase activity SYNONYMS - uridyltransferase activity SYNONYMS - uridylyl removing enzyme activity // UNIQUE-ID - GO:0051748 TYPES - GO:0070569 COMMON-NAME - UTP-monosaccharide-1-phosphate uridylyltransferase activity SYNONYMS - PsUSP SYNONYMS - UDP-monosaccharide diphosphorylase activity SYNONYMS - UDP-monosaccharide pyrophosphorylase activity SYNONYMS - UDP-sugar pyrophosphorylase activity SYNONYMS - USP SYNONYMS - UTP-monosaccharide-1-phosphate uridylyltransferase activity // UNIQUE-ID - GO:0051267 TYPES - GO:0051377 COMMON-NAME - CP2 mannose-ethanolamine phosphotransferase activity SYNONYMS - addition of ethanolamine phosphate to mannose of GPI precursor CP2 SYNONYMS - CP2 ethanolamine phosphate transferase activity SYNONYMS - CP2 EtN-P transferase activity SYNONYMS - CP2 phosphoethanolamine transferase activity SYNONYMS - gpi7 activity // UNIQUE-ID - GO:0001733 TYPES - GO:0050694 COMMON-NAME - galactosylceramide sulfotransferase activity SYNONYMS - 3'-phosphoadenosine-5'-phosphosulfate-cerebroside sulfotransferase activity SYNONYMS - 3'-phosphoadenylyl-sulfate:galactosylceramide 3'-sulfotransferase activity SYNONYMS - cerebroside sulfotransferase activity SYNONYMS - galactocerebroside sulfotransferase activity SYNONYMS - galactolipid sulfotransferase activity SYNONYMS - galactosylceramide sulphotransferase activity SYNONYMS - glycolipid sulfotransferase activity SYNONYMS - glycosphingolipid sulfotransferase activity SYNONYMS - GSase // UNIQUE-ID - GO:0004190 TYPES - GO:0004175 COMMON-NAME - aspartic-type endopeptidase activity SYNONYMS - aspartic endopeptidase activity SYNONYMS - aspartic protease activity SYNONYMS - aspartyl protease activity SYNONYMS - carboxyl protease activity // UNIQUE-ID - GO:0004197 TYPES - GO:0004175 TYPES - GO:0008234 COMMON-NAME - cysteine-type endopeptidase activity SYNONYMS - lysosomal cysteine-type endopeptidase SYNONYMS - thiol endopeptidase activity // UNIQUE-ID - GO:0004222 TYPES - GO:0004175 TYPES - GO:0008237 COMMON-NAME - metalloendopeptidase activity SYNONYMS - metalloprotease SYNONYMS - metalloproteinase // UNIQUE-ID - GO:0004244 TYPES - GO:0004175 COMMON-NAME - mitochondrial inner membrane peptidase activity SYNONYMS - IMP // UNIQUE-ID - GO:0004298 TYPES - GO:0004175 COMMON-NAME - threonine endopeptidase activity SYNONYMS - 26S protease SYNONYMS - alkaline protease SYNONYMS - ingensin SYNONYMS - large multicatalytic protease SYNONYMS - lens neutral proteinase SYNONYMS - MCP SYNONYMS - multicatalytic endopeptidase complex SYNONYMS - multicatalytic proteinase SYNONYMS - multicatalytic proteinase (complex) SYNONYMS - prosome SYNONYMS - proteasome endopeptidase complex SYNONYMS - tricorn protease SYNONYMS - tricorn proteinase // UNIQUE-ID - GO:0008717 TYPES - GO:0004175 COMMON-NAME - D-alanyl-D-alanine endopeptidase activity SYNONYMS - penicillin-binding protein 7 SYNONYMS - penicillin-binding protein 8 // UNIQUE-ID - GO:0042708 TYPES - GO:0004175 COMMON-NAME - elastase activity // UNIQUE-ID - GO:0004253 TYPES - GO:0004252 COMMON-NAME - gamma-renin activity // UNIQUE-ID - GO:0004254 TYPES - GO:0004252 COMMON-NAME - acylaminoacyl-peptidase activity SYNONYMS - acylamino-acid-releasing enzyme activity SYNONYMS - alpha-N-acylpeptide hydrolase activity SYNONYMS - N-acylpeptide hydrolase activity SYNONYMS - N-formylmethionine (fMet) aminopeptidase activity // UNIQUE-ID - GO:0004261 TYPES - GO:0004252 COMMON-NAME - cathepsin G activity SYNONYMS - chymotrypsin-like proteinase activity SYNONYMS - neutral proteinase activity // UNIQUE-ID - GO:0004263 TYPES - GO:0004252 COMMON-NAME - chymotrypsin activity SYNONYMS - alpha-chymar SYNONYMS - alpha-chymar ophth SYNONYMS - alpha-chymotrypsin A SYNONYMS - alpha-chymotrypsin activity SYNONYMS - avazyme SYNONYMS - chymar SYNONYMS - chymotest SYNONYMS - chymotrypsin A activity SYNONYMS - chymotrypsin B activity SYNONYMS - chymotrypsins A and B SYNONYMS - enzeon SYNONYMS - quimar SYNONYMS - quimotrase activity // UNIQUE-ID - GO:0004275 TYPES - GO:0004252 COMMON-NAME - enteropeptidase activity SYNONYMS - enterokinase activity // UNIQUE-ID - GO:0004276 TYPES - GO:0004252 COMMON-NAME - furin activity SYNONYMS - dibasic processing enzyme activity SYNONYMS - PACE SYNONYMS - paired basic amino acid cleaving enzyme SYNONYMS - paired basic amino acid converting enzyme SYNONYMS - paired basic amino acid residue cleaving enzyme activity SYNONYMS - prohormone convertase activity SYNONYMS - serine proteinase PACE SYNONYMS - SPC3 // UNIQUE-ID - GO:0004277 TYPES - GO:0004252 COMMON-NAME - granzyme A activity SYNONYMS - CTLA3 SYNONYMS - cytotoxic T lymphocyte serine protease SYNONYMS - cytotoxic T-lymphocyte proteinase 1 activity SYNONYMS - HuTPS SYNONYMS - T-cell associated protease 1 SYNONYMS - T-cell derived serine proteinase SYNONYMS - TSP-1 // UNIQUE-ID - GO:0004278 TYPES - GO:0004252 COMMON-NAME - granzyme B activity SYNONYMS - CCP1 proteinase SYNONYMS - CCPII SYNONYMS - CTLA1 SYNONYMS - cytotoxic cell proteinase-1 SYNONYMS - cytotoxic t-lymphocyte proteinase 2 activity SYNONYMS - granzyme G SYNONYMS - granzyme H // UNIQUE-ID - GO:0004283 TYPES - GO:0004252 COMMON-NAME - plasmin activity SYNONYMS - actase activity SYNONYMS - fibrinase activity SYNONYMS - fibrinolysin activity SYNONYMS - serum tryptase activity SYNONYMS - thrombolysin // UNIQUE-ID - GO:0004284 TYPES - GO:0004252 COMMON-NAME - acrosin activity SYNONYMS - acrosin amidase activity SYNONYMS - acrosomal protease activity SYNONYMS - acrosomal proteinase activity SYNONYMS - acrozonase activity SYNONYMS - alpha-acrosin SYNONYMS - beta-acrosin SYNONYMS - psi-acrosin // UNIQUE-ID - GO:0004287 TYPES - GO:0004252 COMMON-NAME - prolyl oligopeptidase activity SYNONYMS - endoprolylpeptidase activity SYNONYMS - post-proline cleaving enzyme activity SYNONYMS - post-proline endopeptidase activity SYNONYMS - proline endopeptidase activity SYNONYMS - proline-specific endopeptidase activity SYNONYMS - prolyl endopeptidase activity // UNIQUE-ID - GO:0004289 TYPES - GO:0004252 COMMON-NAME - subtilase activity // UNIQUE-ID - GO:0004293 TYPES - GO:0004252 COMMON-NAME - tissue kallikrein activity SYNONYMS - bradykininogenase SYNONYMS - callicrein SYNONYMS - depot-padutin SYNONYMS - dilminal D SYNONYMS - glandular kallikrein activity SYNONYMS - glumorin SYNONYMS - kallidinogenase SYNONYMS - kallikrein SYNONYMS - kidney kallikrein SYNONYMS - kininogenase SYNONYMS - kininogenin activity SYNONYMS - onokrein P SYNONYMS - padreatin SYNONYMS - padutin SYNONYMS - pancreatic kallikrein SYNONYMS - salivary kallikrein SYNONYMS - submandibular kallikrein SYNONYMS - submaxillary kallikrein SYNONYMS - urinary kallikrein SYNONYMS - urokallikrein // UNIQUE-ID - GO:0004295 TYPES - GO:0004252 COMMON-NAME - trypsin activity // UNIQUE-ID - GO:0008132 TYPES - GO:0004252 TYPES - GO:0042708 COMMON-NAME - pancreatic elastase activity // UNIQUE-ID - GO:0008243 TYPES - GO:0004252 COMMON-NAME - plasminogen activator activity SYNONYMS - abbokinase activity SYNONYMS - cellular plasminogen activator activity SYNONYMS - double-chain urokinase-type plasminogen activator SYNONYMS - plasminogen activator, tissue-type SYNONYMS - t-PA SYNONYMS - t-plasminogen activator activity SYNONYMS - tissue plasminogen activator activity SYNONYMS - tissue-type plasminogen activator activity SYNONYMS - tPA activity SYNONYMS - two-chain urokinase-type plasminogen activator SYNONYMS - u-PA SYNONYMS - u-plasminogen activator activity SYNONYMS - uPA SYNONYMS - urinary esterase A SYNONYMS - urinary plasminogen activator activity SYNONYMS - urokinase activity SYNONYMS - urokinase plasminogen activator SYNONYMS - urokinase-type plasminogen activator // UNIQUE-ID - GO:0008462 TYPES - GO:0004252 COMMON-NAME - endopeptidase Clp activity SYNONYMS - ATP-dependent Clp protease SYNONYMS - caseinolytic protease activity SYNONYMS - Clp protease SYNONYMS - ClpP SYNONYMS - endopeptidase Ti activity SYNONYMS - protease Ti activity // UNIQUE-ID - GO:0016808 TYPES - GO:0004252 COMMON-NAME - proprotein convertase activity // UNIQUE-ID - GO:0004214 TYPES - GO:0008234 TYPES - GO:0008239 COMMON-NAME - dipeptidyl-peptidase I activity SYNONYMS - cathepsin C activity SYNONYMS - cathepsin J activity SYNONYMS - DAP I SYNONYMS - dipeptide arylamidase I SYNONYMS - dipeptidyl aminopeptidase I activity SYNONYMS - dipeptidyl transferase activity // UNIQUE-ID - GO:0019783 TYPES - GO:0008234 COMMON-NAME - small conjugating protein-specific protease activity SYNONYMS - ubiquitin-like specific protease activity SYNONYMS - ubiquitin-like-protein-specific protease activity // UNIQUE-ID - GO:0004294 TYPES - GO:0008240 COMMON-NAME - tripeptidyl-peptidase II activity SYNONYMS - TPP SYNONYMS - tripeptidyl aminopeptidase activity SYNONYMS - tripeptidyl aminopeptidase II SYNONYMS - tripeptidyl peptidase activity SYNONYMS - tripeptidyl peptidase II // UNIQUE-ID - GO:0019131 TYPES - GO:0008240 COMMON-NAME - tripeptidyl-peptidase I activity SYNONYMS - tripeptidyl aminopeptidase activity SYNONYMS - tripeptidyl peptidase activity // UNIQUE-ID - GO:0004185 TYPES - GO:0004180 TYPES - GO:0070008 COMMON-NAME - serine-type carboxypeptidase activity // UNIQUE-ID - GO:0004246 TYPES - GO:0008237 TYPES - GO:0008241 COMMON-NAME - peptidyl-dipeptidase A activity SYNONYMS - ACE activity SYNONYMS - angiotensin converting enzyme SYNONYMS - angiotensin I-converting enzyme activity SYNONYMS - carboxycathepsin activity SYNONYMS - DCP SYNONYMS - dipeptide hydrolase SYNONYMS - dipeptidyl carboxypeptidase I activity SYNONYMS - endothelial cell peptidyl dipeptidase activity SYNONYMS - kininase II activity SYNONYMS - PDH SYNONYMS - peptidase P activity SYNONYMS - peptidyl dipeptidase A SYNONYMS - peptidyl dipeptidase I activity SYNONYMS - peptidyl dipeptidase-4 SYNONYMS - peptidyl dipeptide hydrolase activity SYNONYMS - peptidyl-dipeptide hydrolase activity SYNONYMS - peptidyldipeptide hydrolase activity // UNIQUE-ID - GO:0008235 TYPES - GO:0008237 TYPES - GO:0008238 COMMON-NAME - metalloexopeptidase activity // UNIQUE-ID - GO:0016921 TYPES - GO:0008237 TYPES - GO:0016920 COMMON-NAME - pyroglutamyl-peptidase II activity SYNONYMS - PAP-II activity SYNONYMS - pyroglutamate aminopeptidase II SYNONYMS - pyroglutamyl aminopeptidase II activity SYNONYMS - pyroglutamyl peptidase II SYNONYMS - thyroliberin-hydrolyzing pyroglutamate aminopeptidase activity SYNONYMS - thyroliberinase activity SYNONYMS - thyrotropin-releasing factor pyroglutamate aminopeptidase activity SYNONYMS - thyrotropin-releasing hormone degrading ectoenzyme activity SYNONYMS - thyrotropin-releasing hormone-degrading peptidase activity SYNONYMS - thyrotropin-releasing hormone-degrading pyroglutamate aminopeptidase activity SYNONYMS - TRH-DE activity SYNONYMS - TRH-degrading ectoenzyme activity SYNONYMS - TRH-specific aminopeptidase activity // UNIQUE-ID - GO:0004177 TYPES - GO:0008238 COMMON-NAME - aminopeptidase activity // UNIQUE-ID - GO:0004180 TYPES - GO:0008238 COMMON-NAME - carboxypeptidase activity // UNIQUE-ID - GO:0008241 TYPES - GO:0008238 COMMON-NAME - peptidyl-dipeptidase activity // UNIQUE-ID - GO:0008242 TYPES - GO:0008238 COMMON-NAME - omega peptidase activity // UNIQUE-ID - GO:0016805 TYPES - GO:0008238 COMMON-NAME - dipeptidase activity // UNIQUE-ID - GO:0016806 TYPES - GO:0008238 COMMON-NAME - dipeptidyl-peptidase and tripeptidyl-peptidase activity // UNIQUE-ID - GO:0047499 TYPES - GO:0004623 COMMON-NAME - calcium-independent phospholipase A2 activity SYNONYMS - calcium-independent cytosolic phospholipase A2 activity // UNIQUE-ID - GO:0004520 TYPES - GO:0004519 TYPES - GO:0004536 COMMON-NAME - endodeoxyribonuclease activity SYNONYMS - endonuclease G activity // UNIQUE-ID - GO:0004521 TYPES - GO:0004519 TYPES - GO:0004540 COMMON-NAME - endoribonuclease activity SYNONYMS - endonuclease G activity // UNIQUE-ID - GO:0016893 TYPES - GO:0004519 COMMON-NAME - endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters COMMENT - Note that this activity can catalyze cleavage of DNA or RNA. SYNONYMS - 5'-endonuclease activity SYNONYMS - endoribonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters // UNIQUE-ID - GO:0016894 TYPES - GO:0004519 COMMON-NAME - endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters COMMENT - Note that this activity can catalyze cleavage of DNA or RNA. SYNONYMS - 3'-endonuclease activity SYNONYMS - endoribonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters // UNIQUE-ID - GO:0004528 TYPES - GO:0004527 TYPES - GO:0008081 COMMON-NAME - phosphodiesterase I activity SYNONYMS - 5' nucleotide phosphodiesterase/alkaline phosphodiesterase I activity SYNONYMS - 5'-exonuclease activity SYNONYMS - 5'-NPDase activity SYNONYMS - 5'-nucleotide phosphodiesterase activity SYNONYMS - 5'-PDase activity SYNONYMS - 5'-PDE activity SYNONYMS - 5'-phosphodiesterase activity SYNONYMS - 5'NPDE activity SYNONYMS - alkaline phosphodiesterase activity SYNONYMS - exonuclease I activity SYNONYMS - nucleotide pyrophosphatase/phosphodiesterase I activity SYNONYMS - oligonucleate 5'-nucleotidohydrolase activity SYNONYMS - orthophosphoric diester phosphohydrolase activity SYNONYMS - PDE I activity SYNONYMS - phosphodiesterase activity // UNIQUE-ID - GO:0004529 TYPES - GO:0004527 TYPES - GO:0004536 COMMON-NAME - exodeoxyribonuclease activity // UNIQUE-ID - GO:0004532 TYPES - GO:0004527 TYPES - GO:0004540 COMMON-NAME - exoribonuclease activity // UNIQUE-ID - GO:0008408 TYPES - GO:0004527 COMMON-NAME - 3'-5' exonuclease activity SYNONYMS - 3'-5'-exonuclease activity // UNIQUE-ID - GO:0008409 TYPES - GO:0004527 COMMON-NAME - 5'-3' exonuclease activity // UNIQUE-ID - GO:0016796 TYPES - GO:0004527 COMMON-NAME - exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters COMMENT - Note that this activity can catalyze cleavage of DNA or RNA. SYNONYMS - exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5' phosphomonoesters // UNIQUE-ID - GO:0004549 TYPES - GO:0004540 COMMON-NAME - tRNA-specific ribonuclease activity SYNONYMS - tRNA-specific RNase activity // UNIQUE-ID - GO:0008995 TYPES - GO:0004540 COMMON-NAME - ribonuclease E activity // UNIQUE-ID - GO:0004629 TYPES - GO:0004620 TYPES - GO:0008081 COMMON-NAME - phospholipase C activity SYNONYMS - alpha-toxin SYNONYMS - Clostridium oedematiens beta- and gamma-toxins activity SYNONYMS - Clostridium welchii alpha-toxin activity SYNONYMS - heat-labile hemolysin SYNONYMS - lecithinase C activity SYNONYMS - lipophosphodiesterase C SYNONYMS - lipophosphodiesterase I activity SYNONYMS - phosphatidase C SYNONYMS - phosphatidylcholine cholinephosphohydrolase activity SYNONYMS - phospholipase C, acting on phosphatidylcholine // UNIQUE-ID - GO:0004630 TYPES - GO:0004620 TYPES - GO:0008081 COMMON-NAME - phospholipase D activity SYNONYMS - choline phosphatase activity SYNONYMS - lecithinase D activity SYNONYMS - lipophosphodiesterase II activity SYNONYMS - phosphatidylcholine phosphatidohydrolase activity // UNIQUE-ID - GO:0004767 TYPES - GO:0004620 TYPES - GO:0008081 COMMON-NAME - sphingomyelin phosphodiesterase activity SYNONYMS - acid sphingomyelin phosphodiesterase SYNONYMS - acid sphingomyelinase activity SYNONYMS - neutral sphingomyelin phosphodiesterase SYNONYMS - neutral sphingomyelinase activity SYNONYMS - sphingomyelin cholinephosphohydrolase activity SYNONYMS - sphingomyelinase activity // UNIQUE-ID - GO:0003986 TYPES - GO:0016289 COMMON-NAME - acetyl-CoA hydrolase activity SYNONYMS - acetyl coenzyme A acylase activity SYNONYMS - acetyl coenzyme A deacylase activity SYNONYMS - acetyl coenzyme A hydrolase activity SYNONYMS - acetyl-CoA acylase activity SYNONYMS - acetyl-CoA deacylase activity SYNONYMS - acetyl-CoA thiol esterase activity // UNIQUE-ID - GO:0016291 TYPES - GO:0016289 COMMON-NAME - acyl-CoA thioesterase activity SYNONYMS - acyl-CoA thiolesterase activity // UNIQUE-ID - GO:0004112 TYPES - GO:0008081 COMMON-NAME - cyclic-nucleotide phosphodiesterase activity // UNIQUE-ID - GO:0008889 TYPES - GO:0008081 COMMON-NAME - glycerophosphodiester phosphodiesterase activity SYNONYMS - gene hpd protein SYNONYMS - glycerophosphodiester glycerophosphohydrolase activity SYNONYMS - glycerophosphoryl diester phosphodiesterase activity SYNONYMS - IgD-binding protein D // UNIQUE-ID - GO:0047395 TYPES - GO:0008081 COMMON-NAME - glycerophosphoinositol glycerophosphodiesterase activity SYNONYMS - 1-(sn-glycero-3-phospho)-1D-myo-inositol glycerophosphohydrolase activity SYNONYMS - sn-glycero(3)phosphoinositol glycerophosphohydrolase activity SYNONYMS - sn-glycero-3-phospho-1-inositol glycerophosphohydrolase activity // UNIQUE-ID - GO:0003993 TYPES - GO:0016791 COMMON-NAME - acid phosphatase activity SYNONYMS - acid monophosphatase activity SYNONYMS - acid nucleoside diphosphate phosphatase activity SYNONYMS - acid phosphohydrolase activity SYNONYMS - acid phosphomonoester hydrolase activity SYNONYMS - acid phosphomonoesterase activity SYNONYMS - glycerophosphatase activity SYNONYMS - orthophosphoric-monoester phosphohydrolase (acid optimum) SYNONYMS - phosphate-monoester phosphohydrolase (acid optimum) SYNONYMS - phosphomonoesterase activity SYNONYMS - uteroferrin // UNIQUE-ID - GO:0004035 TYPES - GO:0016791 COMMON-NAME - alkaline phosphatase activity SYNONYMS - alkaline phenyl phosphatase activity SYNONYMS - alkaline phosphohydrolase activity SYNONYMS - alkaline phosphomonoesterase activity SYNONYMS - glycerophosphatase activity SYNONYMS - orthophosphoric-monoester phosphohydrolase (alkaline optimum) SYNONYMS - phosphate-monoester phosphohydrolase (alkaline optimum) SYNONYMS - phosphomonoesterase activity // UNIQUE-ID - GO:0004083 TYPES - GO:0016791 COMMON-NAME - bisphosphoglycerate phosphatase activity SYNONYMS - 2,3-bisphospho-D-glycerate 2-phosphohydrolase activity SYNONYMS - 2,3-bisphosphoglycerate phosphatase activity SYNONYMS - 2,3-diphosphoglycerate phosphatase activity SYNONYMS - 2,3-diphosphoglyceric acid phosphatase activity SYNONYMS - diphosphoglycerate phosphatase activity SYNONYMS - glycerate-2,3-diphosphate phosphatase activity // UNIQUE-ID - GO:0004437 TYPES - GO:0016791 COMMON-NAME - inositol or phosphatidylinositol phosphatase activity SYNONYMS - inositol/phosphatidylinositol phosphatase activity // UNIQUE-ID - GO:0004647 TYPES - GO:0016791 COMMON-NAME - phosphoserine phosphatase activity SYNONYMS - O-phosphoserine phosphohydrolase activity // UNIQUE-ID - GO:0004721 TYPES - GO:0016791 COMMON-NAME - phosphoprotein phosphatase activity SYNONYMS - phosphoprotein phosphohydrolase activity SYNONYMS - protein phosphatase activity SYNONYMS - protein phosphatase-1 activity SYNONYMS - protein phosphatase-2A activity SYNONYMS - protein phosphatase-2B activity SYNONYMS - protein phosphatase-2C activity // UNIQUE-ID - GO:0004741 TYPES - GO:0016791 COMMON-NAME - [pyruvate dehydrogenase (lipoamide)] phosphatase activity SYNONYMS - [pyruvate dehydrogenase (lipoamide)] phosphatase, intrinsic catalyst activity SYNONYMS - phosphopyruvate dehydrogenase phosphatase activity SYNONYMS - pyruvate dehydrogenase (lipoamide) phosphatase activity SYNONYMS - pyruvate dehydrogenase (lipoamide)-phosphatase activity SYNONYMS - pyruvate dehydrogenase (lipoamide)-phosphate phosphohydrolase activity SYNONYMS - pyruvate dehydrogenase phosphatase activity // UNIQUE-ID - GO:0008252 TYPES - GO:0016791 COMMON-NAME - nucleotidase activity SYNONYMS - acid nucleotidase activity SYNONYMS - deoxyinosine-activated nucleotidase (DIAN) SYNONYMS - deoxyribonucleoside-activated nucleotidase (DAN) SYNONYMS - NSP I SYNONYMS - NSP II SYNONYMS - nucleotide phosphohydrolase activity SYNONYMS - nucleotide-specific phosphatase activity // UNIQUE-ID - GO:0017120 TYPES - GO:0016791 COMMON-NAME - polyphosphoinositide phosphatase activity // UNIQUE-ID - GO:0019203 TYPES - GO:0016791 COMMON-NAME - carbohydrate phosphatase activity // UNIQUE-ID - GO:0019204 TYPES - GO:0016791 COMMON-NAME - nucleotide phosphatase activity // UNIQUE-ID - GO:0042392 TYPES - GO:0016791 COMMON-NAME - sphingosine-1-phosphate phosphatase activity SYNONYMS - sphingosine-1-phosphate phosphohydrolase activity SYNONYMS - SPP phosphatase activity SYNONYMS - SPPase activity // UNIQUE-ID - GO:0042577 TYPES - GO:0016791 COMMON-NAME - lipid phosphatase activity // UNIQUE-ID - GO:0050124 TYPES - GO:0016791 COMMON-NAME - N-acylneuraminate-9-phosphatase activity SYNONYMS - acylneuraminate 9-phosphatase activity SYNONYMS - N-acylneuraminate-9-phosphate phosphohydrolase activity SYNONYMS - N-acylneuraminic (sialic) acid 9-phosphatase activity SYNONYMS - N-acylneuraminic acid 9-phosphate phosphatase activity // UNIQUE-ID - GO:0005001 TYPES - GO:0004725 TYPES - GO:0019198 COMMON-NAME - transmembrane receptor protein tyrosine phosphatase activity // UNIQUE-ID - GO:0004567 TYPES - GO:0015923 COMMON-NAME - beta-mannosidase activity SYNONYMS - beta-D-mannosidase activity SYNONYMS - beta-D-mannoside mannohydrolase activity SYNONYMS - beta-mannoside mannohydrolase activity SYNONYMS - exo-beta-D-mannanase activity SYNONYMS - mannanase activity SYNONYMS - mannase activity // UNIQUE-ID - GO:0015924 TYPES - GO:0015923 COMMON-NAME - mannosyl-oligosaccharide mannosidase activity // UNIQUE-ID - GO:0004557 TYPES - GO:0015925 COMMON-NAME - alpha-galactosidase activity SYNONYMS - alpha-D-galactosidase activity SYNONYMS - alpha-D-galactoside galactohydrolase activity SYNONYMS - alpha-galactosidase A SYNONYMS - alpha-galactoside galactohydrolase activity SYNONYMS - melibiase activity // UNIQUE-ID - GO:0004565 TYPES - GO:0015925 COMMON-NAME - beta-galactosidase activity COMMENT - Note that the inclusion of 'MetaCyc:BGALACT-PWY' is exceptional: normally MetaCyc pathway entries are database references for biological process terms, not molecular function terms. An exception was made in this case because the MetaCyc entry 'BGALACT-PWY' describes only one reaction, that catalyzed by beta-galactosidase. SYNONYMS - beta-D-galactanase activity SYNONYMS - beta-D-galactoside galactohydrolase activity SYNONYMS - beta-D-lactosidase activity SYNONYMS - beta-lactosidase activity SYNONYMS - exo-(1->4)-beta-D-galactanase activity SYNONYMS - hydrolact SYNONYMS - lactose hydrolysis SYNONYMS - lactozym SYNONYMS - maxilact SYNONYMS - oryzatym SYNONYMS - S 2107 SYNONYMS - sumiklat SYNONYMS - trilactase activity // UNIQUE-ID - GO:0004558 TYPES - GO:0015926 COMMON-NAME - alpha-glucosidase activity SYNONYMS - acid maltase activity SYNONYMS - alpha-1,4-glucosidase activity SYNONYMS - alpha-D-glucosidase activity SYNONYMS - alpha-D-glucoside glucohydrolase activity SYNONYMS - alpha-glucopyranosidase activity SYNONYMS - alpha-glucosidase II SYNONYMS - alpha-glucoside hydrolase activity SYNONYMS - glucoinvertase activity SYNONYMS - glucosidoinvertase activity SYNONYMS - glucosidosucrase activity SYNONYMS - lysosomal alpha-glucosidase activity SYNONYMS - maltase-glucoamylase activity // UNIQUE-ID - GO:0004563 TYPES - GO:0015929 COMMON-NAME - beta-N-acetylhexosaminidase activity SYNONYMS - beta-acetylaminodeoxyhexosidase activity SYNONYMS - beta-acetylhexosaminidinase activity SYNONYMS - beta-D-hexosaminidase activity SYNONYMS - beta-D-N-acetylhexosaminidase activity SYNONYMS - beta-hexosaminidase activity SYNONYMS - beta-N-acetyl-D-hexosaminidase activity SYNONYMS - beta-N-acetyl-D-hexosaminide N-acetylhexosaminohydrolase activity SYNONYMS - hexosaminidase A SYNONYMS - N-acetyl-beta-D-hexosaminidase activity SYNONYMS - N-acetyl-beta-glucosaminidase activity SYNONYMS - N-acetyl-beta-hexosaminidase activity SYNONYMS - N-acetylhexosaminidase activity // UNIQUE-ID - GO:0008456 TYPES - GO:0015929 COMMON-NAME - alpha-N-acetylgalactosaminidase activity SYNONYMS - alpha-acetylgalactosaminidase activity SYNONYMS - alpha-galactosidase B activity SYNONYMS - alpha-N-acetyl-D-galactosaminide N-acetylgalactosaminohydrolase activity SYNONYMS - alpha-NAGA activity SYNONYMS - N-acetyl-alpha-D-galactosaminidase activity SYNONYMS - N-acetyl-alpha-galactosaminidase activity // UNIQUE-ID - GO:0004556 TYPES - GO:0016160 COMMON-NAME - alpha-amylase activity SYNONYMS - 1,4-alpha-D-glucan glucanohydrolase activity SYNONYMS - alpha amylase activity SYNONYMS - endoamylase activity SYNONYMS - glycogenase activity SYNONYMS - taka-amylase A // UNIQUE-ID - GO:0000702 TYPES - GO:0019104 COMMON-NAME - oxidized base lesion DNA N-glycosylase activity // UNIQUE-ID - GO:0003905 TYPES - GO:0019104 COMMON-NAME - alkylbase DNA N-glycosylase activity SYNONYMS - 3-methyladenine DNA glycosylase II SYNONYMS - AlkA SYNONYMS - alkylated-DNA glycohydrolase (releasing methyladenine and methylguanine) SYNONYMS - alkylbase DNA glycosidase activity SYNONYMS - deoxyribonucleate 3-methyladenine glycosidase II SYNONYMS - DNA glycosidase II activity SYNONYMS - DNA-3-methyladenine glycosidase II activity SYNONYMS - DNA-3-methyladenine glycosylase II // UNIQUE-ID - GO:0004844 TYPES - GO:0019104 COMMON-NAME - uracil DNA N-glycosylase activity SYNONYMS - uracil-DNA glycosylase activity // UNIQUE-ID - GO:0017136 TYPES - GO:0004407 COMMON-NAME - NAD-dependent histone deacetylase activity SYNONYMS - SIR2 // UNIQUE-ID - GO:0003933 TYPES - GO:0019238 COMMON-NAME - GTP cyclohydrolase activity // UNIQUE-ID - GO:0003937 TYPES - GO:0019238 COMMON-NAME - IMP cyclohydrolase activity SYNONYMS - IMP 1,2-hydrolase (decyclizing) SYNONYMS - IMP synthetase activity SYNONYMS - inosinate cyclohydrolase activity SYNONYMS - inosinicase activity // UNIQUE-ID - GO:0004477 TYPES - GO:0019238 COMMON-NAME - methenyltetrahydrofolate cyclohydrolase activity SYNONYMS - 5,10-methenyltetrahydrofolate 5-hydrolase (decyclizing) SYNONYMS - citrovorum factor cyclodehydrase activity SYNONYMS - formyl-methenyl-methylenetetrahydrofolate synthetase (combined) // UNIQUE-ID - GO:0004427 TYPES - GO:0016462 COMMON-NAME - inorganic diphosphatase activity SYNONYMS - diphosphate phosphohydrolase activity SYNONYMS - inorganic pyrophosphatase activity SYNONYMS - pyrophosphate phosphohydrolase activity // UNIQUE-ID - GO:0004551 TYPES - GO:0016462 COMMON-NAME - nucleotide diphosphatase activity SYNONYMS - dinucleotide nucleotidohydrolase activity SYNONYMS - nucleotide pyrophosphatase activity SYNONYMS - nucleotide-sugar pyrophosphatase activity // UNIQUE-ID - GO:0008486 TYPES - GO:0016462 COMMON-NAME - diphosphoinositol-polyphosphate diphosphatase activity SYNONYMS - diadenosine 5',5'''-P1,P6-hexaphosphate hydrolase SYNONYMS - diphospho-myo-inositol-polyphosphate diphosphohydrolase activity SYNONYMS - diphosphoinositol polyphosphate phosphohydrolase activity SYNONYMS - diphosphoinositol-polyphosphate phosphohydrolase activity SYNONYMS - DIPP activity // UNIQUE-ID - GO:0008768 TYPES - GO:0016462 COMMON-NAME - UDP-sugar diphosphatase activity SYNONYMS - nucleosidediphosphate-sugar diphosphatase activity SYNONYMS - nucleosidediphosphate-sugar pyrophosphatase activity SYNONYMS - UDP-sugar hydrolase activity SYNONYMS - UDP-sugar pyrophosphatase activity SYNONYMS - UDP-sugar sugarphosphohydrolase activity // UNIQUE-ID - GO:0017110 TYPES - GO:0016462 COMMON-NAME - nucleoside-diphosphatase activity SYNONYMS - apyrase activity SYNONYMS - CDPase SYNONYMS - IDPase SYNONYMS - inosine 5'-diphosphatase SYNONYMS - inosine diphosphatase SYNONYMS - NDPase activity SYNONYMS - nucleoside 5'-diphosphatase activity SYNONYMS - nucleoside diphosphatase activity SYNONYMS - nucleoside diphosphate phosphatase activity SYNONYMS - nucleoside diphosphate phosphohydrolase activity SYNONYMS - nucleoside-diphosphate phosphohydrolase activity SYNONYMS - type B nucleoside diphosphatase SYNONYMS - type L nucleoside diphosphatase // UNIQUE-ID - GO:0017111 TYPES - GO:0016462 COMMON-NAME - nucleoside-triphosphatase activity SYNONYMS - apyrase activity SYNONYMS - NTPase activity SYNONYMS - nucleoside 5-triphosphatase activity SYNONYMS - nucleoside triphosphatase activity SYNONYMS - nucleoside triphosphate hydrolase activity SYNONYMS - nucleoside triphosphate phosphohydrolase activity SYNONYMS - nucleoside-5-triphosphate phosphohydrolase activity SYNONYMS - unspecific diphosphate phosphohydrolase activity // UNIQUE-ID - GO:0019144 TYPES - GO:0016462 COMMON-NAME - ADP-sugar diphosphatase activity SYNONYMS - adenosine diphosphosugar pyrophosphatase activity SYNONYMS - ADP-sugar pyrophosphatase activity SYNONYMS - ADP-sugar sugarphosphohydrolase activity SYNONYMS - ADPsugar pyrophosphatase activity // UNIQUE-ID - GO:0047429 TYPES - GO:0016462 COMMON-NAME - nucleoside-triphosphate diphosphatase activity SYNONYMS - nucleoside-triphosphate diphosphohydrolase activity SYNONYMS - nucleoside-triphosphate pyrophosphatase activity // UNIQUE-ID - GO:0047874 TYPES - GO:0016462 COMMON-NAME - dolichyldiphosphatase activity SYNONYMS - dolichol diphosphatase activity SYNONYMS - dolichyl diphosphate phosphohydrolase activity SYNONYMS - dolichyl pyrophosphatase activity SYNONYMS - dolichyl-diphosphate phosphohydrolase activity // UNIQUE-ID - GO:0015662 TYPES - GO:0042625 COMMON-NAME - ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism COMMENT - Consider also annotating to the molecular function term 'ATP binding ; GO:0005524'. SYNONYMS - P-type ATPase activity SYNONYMS - zinc, cadmium, cobalt, nickel, lead-efflux ATPase activity // UNIQUE-ID - GO:0019829 TYPES - GO:0008324 TYPES - GO:0042625 COMMON-NAME - cation-transporting ATPase activity COMMENT - Consider also annotating to the molecular function term 'ATP binding ; GO:0005524'. SYNONYMS - cation ABC transporter SYNONYMS - plasma membrane cation-transporting ATPase // UNIQUE-ID - GO:0043225 TYPES - GO:0008509 TYPES - GO:0042625 COMMON-NAME - anion transmembrane-transporting ATPase activity COMMENT - Consider also annotating to the molecular function term 'ATP binding ; GO:0005524'. SYNONYMS - anion ABC transporter SYNONYMS - anion-transporting ATPase activity // UNIQUE-ID - GO:0015446 TYPES - GO:0008490 TYPES - GO:0019829 TYPES - GO:0043225 COMMON-NAME - arsenite transmembrane-transporting ATPase activity COMMENT - Consider also annotating to the molecular function term 'ATP binding ; GO:0005524'. SYNONYMS - arsenical pump-driving ATPase activity SYNONYMS - arsenical resistance ATPase activity SYNONYMS - arsenical resistance efflux pump SYNONYMS - arsenite ABC transporter SYNONYMS - arsenite transporting ATPase activity SYNONYMS - arsenite-translocating ATPase activity SYNONYMS - arsenite-transporting ATPase activity SYNONYMS - ATP phosphohydrolase (arsenite-exporting) activity // UNIQUE-ID - GO:0004613 TYPES - GO:0004611 COMMON-NAME - phosphoenolpyruvate carboxykinase (GTP) activity SYNONYMS - GTP:oxaloacetate carboxy-lyase (adding GTP; phosphoenolpyruvate-forming) SYNONYMS - GTP:oxaloacetate carboxy-lyase (transphosphorylating) SYNONYMS - phosphoenolpyruvate carboxylase (GTP) SYNONYMS - phosphoenolpyruvic carboxykinase SYNONYMS - phosphoenolpyruvic carboxykinase (GTP) SYNONYMS - phosphoenolpyruvic carboxylase (GTP) SYNONYMS - phosphopyruvate (guanosine triphosphate) carboxykinase activity SYNONYMS - phosphopyruvate carboxylase (GTP) // UNIQUE-ID - GO:0004813 TYPES - GO:0004812 COMMON-NAME - alanine-tRNA ligase activity SYNONYMS - Ala-tRNA synthetase activity SYNONYMS - alanine transfer RNA synthetase activity SYNONYMS - alanine translase activity SYNONYMS - alanine tRNA synthetase activity SYNONYMS - alanine-transfer RNA ligase activity SYNONYMS - alanyl-transfer ribonucleate synthase activity SYNONYMS - alanyl-transfer ribonucleate synthetase activity SYNONYMS - alanyl-transfer ribonucleic acid synthetase activity SYNONYMS - alanyl-transfer RNA synthetase activity SYNONYMS - alanyl-tRNA synthetase activity SYNONYMS - AlaRS SYNONYMS - L-alanine:tRNAAla ligase (AMP-forming) // UNIQUE-ID - GO:0004814 TYPES - GO:0004812 COMMON-NAME - arginine-tRNA ligase activity SYNONYMS - arginine translase activity SYNONYMS - arginine-tRNA synthetase activity SYNONYMS - arginyl transfer ribonucleic acid synthetase activity SYNONYMS - arginyl-transfer ribonucleate synthetase activity SYNONYMS - arginyl-transfer RNA synthetase activity SYNONYMS - arginyl-tRNA synthetase activity SYNONYMS - L-arginine:tRNAArg ligase (AMP-forming) // UNIQUE-ID - GO:0004815 TYPES - GO:0004812 COMMON-NAME - aspartate-tRNA ligase activity SYNONYMS - aspartic acid translase activity SYNONYMS - aspartyl ribonucleate synthetase activity SYNONYMS - aspartyl ribonucleic synthetase activity SYNONYMS - aspartyl-transfer ribonucleic acid synthetase activity SYNONYMS - aspartyl-transfer RNA synthetase activity SYNONYMS - aspartyl-tRNA synthetase activity SYNONYMS - L-aspartate:tRNAAsp ligase (AMP-forming) // UNIQUE-ID - GO:0004816 TYPES - GO:0004812 COMMON-NAME - asparagine-tRNA ligase activity SYNONYMS - asparagine translase activity SYNONYMS - asparaginyl transfer ribonucleic acid synthetase activity SYNONYMS - asparaginyl transfer RNA synthetase activity SYNONYMS - asparaginyl-transfer ribonucleate synthetase activity SYNONYMS - asparaginyl-tRNA synthetase activity SYNONYMS - asparagyl-transfer RNA synthetase activity SYNONYMS - L-asparagine:tRNAAsn ligase (AMP-forming) // UNIQUE-ID - GO:0004817 TYPES - GO:0004812 COMMON-NAME - cysteine-tRNA ligase activity SYNONYMS - cysteine translase activity SYNONYMS - cysteinyl-transfer ribonucleate synthetase activity SYNONYMS - cysteinyl-transferRNA synthetase activity SYNONYMS - cysteinyl-tRNA synthetase activity SYNONYMS - L-cysteine:tRNACys ligase (AMP-forming) // UNIQUE-ID - GO:0004818 TYPES - GO:0004812 COMMON-NAME - glutamate-tRNA ligase activity SYNONYMS - glutamate-tRNA synthetase activity SYNONYMS - glutamic acid translase activity SYNONYMS - glutamyl-transfer ribonucleate synthetase activity SYNONYMS - glutamyl-transfer ribonucleic acid synthetase activity SYNONYMS - glutamyl-transfer RNA synthetase activity SYNONYMS - glutamyl-tRNA synthetase activity SYNONYMS - L-glutamate:tRNAGlu ligase (AMP-forming) activity // UNIQUE-ID - GO:0004819 TYPES - GO:0004812 COMMON-NAME - glutamine-tRNA ligase activity SYNONYMS - GlnRS SYNONYMS - glutamine translase activity SYNONYMS - glutamine-tRNA synthetase activity SYNONYMS - glutaminyl ribonucleic acid SYNONYMS - glutaminyl-transfer ribonucleate synthetase activity SYNONYMS - glutaminyl-transfer RNA synthetase activity SYNONYMS - glutaminyl-tRNA synthetase activity SYNONYMS - L-glutamine:tRNAGln ligase (AMP-forming) // UNIQUE-ID - GO:0004820 TYPES - GO:0004812 COMMON-NAME - glycine-tRNA ligase activity SYNONYMS - glycine:tRNAGly ligase (AMP-forming) activity SYNONYMS - glycyl translase activity SYNONYMS - glycyl-transfer ribonucleate synthetase activity SYNONYMS - glycyl-transfer ribonucleic acid synthetase activity SYNONYMS - glycyl-transfer RNA synthetase activity SYNONYMS - glycyl-tRNA synthetase activity // UNIQUE-ID - GO:0004821 TYPES - GO:0004812 COMMON-NAME - histidine-tRNA ligase activity SYNONYMS - histidine translase activity SYNONYMS - histidyl-transfer ribonucleate synthetase activity SYNONYMS - histidyl-tRNA synthetase activity SYNONYMS - L-histidine:tRNAHis ligase (AMP-forming) // UNIQUE-ID - GO:0004822 TYPES - GO:0004812 COMMON-NAME - isoleucine-tRNA ligase activity SYNONYMS - isoleucine translase activity SYNONYMS - isoleucine-transfer RNA ligase activity SYNONYMS - isoleucine-tRNA synthetase activity SYNONYMS - isoleucyl-transfer ribonucleate synthetase activity SYNONYMS - isoleucyl-transfer RNA synthetase activity SYNONYMS - isoleucyl-tRNA synthetase activity SYNONYMS - L-isoleucine:tRNAIle ligase (AMP-forming) // UNIQUE-ID - GO:0004823 TYPES - GO:0004812 COMMON-NAME - leucine-tRNA ligase activity SYNONYMS - L-leucine:tRNALeu ligase (AMP-forming) SYNONYMS - leucine translase activity SYNONYMS - leucine-tRNA synthetase activity SYNONYMS - leucyl-transfer ribonucleate synthetase activity SYNONYMS - leucyl-transfer ribonucleic acid synthetase activity SYNONYMS - leucyl-transfer RNA synthetase activity SYNONYMS - leucyl-tRNA synthetase activity // UNIQUE-ID - GO:0004824 TYPES - GO:0004812 COMMON-NAME - lysine-tRNA ligase activity SYNONYMS - L-lysine-transfer RNA ligase activity SYNONYMS - L-lysine:tRNALys ligase (AMP-forming) SYNONYMS - lysine translase activity SYNONYMS - lysine-tRNA synthetase activity SYNONYMS - lysyl-transfer ribonucleate synthetase activity SYNONYMS - lysyl-transfer RNA synthetase activity SYNONYMS - lysyl-tRNA synthetase activity // UNIQUE-ID - GO:0004825 TYPES - GO:0004812 COMMON-NAME - methionine-tRNA ligase activity SYNONYMS - L-methionine:tRNAMet ligase (AMP-forming) SYNONYMS - methionine translase activity SYNONYMS - methionyl-transfer ribonucleate synthetase activity SYNONYMS - methionyl-transfer ribonucleic acid synthetase activity SYNONYMS - methionyl-transfer RNA synthetase activity SYNONYMS - methionyl-tRNA synthetase activity SYNONYMS - MetRS activity // UNIQUE-ID - GO:0004826 TYPES - GO:0004812 COMMON-NAME - phenylalanine-tRNA ligase activity SYNONYMS - L-phenylalanine:tRNAPhe ligase (AMP-forming) activity SYNONYMS - L-phenylalanyl-tRNA synthetase activity SYNONYMS - phenylalanine translase activity SYNONYMS - phenylalanine-tRNA synthetase activity SYNONYMS - phenylalanyl-transfer ribonucleate synthetase activity SYNONYMS - phenylalanyl-transfer RNA ligase activity SYNONYMS - phenylalanyl-transfer RNA synthetase activity SYNONYMS - phenylalanyl-tRNA ligase activity SYNONYMS - phenylalanyl-tRNA synthetase activity // UNIQUE-ID - GO:0004827 TYPES - GO:0004812 COMMON-NAME - proline-tRNA ligase activity SYNONYMS - L-proline:tRNAPro ligase (AMP-forming) SYNONYMS - proline translase activity SYNONYMS - prolinyl-tRNA ligase activity SYNONYMS - prolyl-s-RNA synthetase activity SYNONYMS - prolyl-transfer ribonucleate synthetase activity SYNONYMS - prolyl-transfer ribonucleic acid synthetase activity SYNONYMS - prolyl-transferRNA synthetase activity SYNONYMS - prolyl-tRNA synthetase activity // UNIQUE-ID - GO:0004828 TYPES - GO:0004812 COMMON-NAME - serine-tRNA ligase activity SYNONYMS - L-serine:tRNASer ligase (AMP-forming) SYNONYMS - serine translase activity SYNONYMS - SerRS activity SYNONYMS - seryl-transfer ribonucleate synthetase activity SYNONYMS - seryl-transfer ribonucleic acid synthetase activity SYNONYMS - seryl-transfer RNA synthetase activity SYNONYMS - seryl-tRNA synthetase activity // UNIQUE-ID - GO:0004829 TYPES - GO:0004812 COMMON-NAME - threonine-tRNA ligase activity SYNONYMS - L-threonine:tRNAThr ligase (AMP-forming) SYNONYMS - threonine translase activity SYNONYMS - threonine-transfer ribonucleate synthetase activity SYNONYMS - threonyl ribonucleic synthetase activity SYNONYMS - threonyl-transfer ribonucleate synthetase activity SYNONYMS - threonyl-transfer ribonucleic acid synthetase activity SYNONYMS - threonyl-transfer RNA synthetase activity SYNONYMS - threonyl-tRNA synthetase activity SYNONYMS - TRS // UNIQUE-ID - GO:0004830 TYPES - GO:0004812 COMMON-NAME - tryptophan-tRNA ligase activity SYNONYMS - L-tryptophan-tRNA(Trp) ligase (AMP-forming) activity SYNONYMS - L-tryptophan-tRNATrp ligase (AMP-forming) SYNONYMS - L-tryptophan:tRNATrp ligase (AMP-forming) SYNONYMS - TrpRS activity SYNONYMS - tryptophan translase activity SYNONYMS - tryptophanyl ribonucleic synthetase activity SYNONYMS - tryptophanyl-transfer ribonucleate synthetase activity SYNONYMS - tryptophanyl-transfer ribonucleic acid synthetase activity SYNONYMS - tryptophanyl-transfer ribonucleic synthetase activity SYNONYMS - tryptophanyl-transfer RNA synthetase activity SYNONYMS - tryptophanyl-tRNA synthase activity SYNONYMS - tryptophanyl-tRNA synthetase activity // UNIQUE-ID - GO:0004831 TYPES - GO:0004812 COMMON-NAME - tyrosine-tRNA ligase activity SYNONYMS - L-tyrosine-tRNA(Tyr) ligase (AMP-forming) activity SYNONYMS - L-tyrosine-tRNATyr ligase (AMP-forming) SYNONYMS - L-tyrosine:tRNATyr ligase (AMP-forming) SYNONYMS - tyrosine translase activity SYNONYMS - tyrosine tRNA synthetase activity SYNONYMS - tyrosine-transfer ribonucleate synthetase activity SYNONYMS - tyrosine-transfer RNA ligase activity SYNONYMS - tyrosyl-transfer ribonucleate synthetase activity SYNONYMS - tyrosyl-transfer ribonucleic acid synthetase activity SYNONYMS - tyrosyl-transfer RNA synthetase activity SYNONYMS - tyrosyl-tRNA ligase activity SYNONYMS - tyrosyl-tRNA synthetase activity // UNIQUE-ID - GO:0004832 TYPES - GO:0004812 COMMON-NAME - valine-tRNA ligase activity SYNONYMS - L-valine:tRNAVal ligase (AMP-forming) SYNONYMS - valine transfer ribonucleate ligase activity SYNONYMS - valine translase activity SYNONYMS - valyl-transfer ribonucleate synthetase activity SYNONYMS - valyl-transfer ribonucleic acid synthetase activity SYNONYMS - valyl-transfer RNA synthetase activity SYNONYMS - valyl-tRNA synthetase activity // UNIQUE-ID - GO:0004776 TYPES - GO:0004774 COMMON-NAME - succinate-CoA ligase (GDP-forming) activity SYNONYMS - G-STK SYNONYMS - P-enzyme SYNONYMS - SCS SYNONYMS - succinate-phosphorylating enzyme SYNONYMS - succinate:CoA ligase (GDP-forming) activity SYNONYMS - succinic thiokinase SYNONYMS - succinyl CoA synthetase activity SYNONYMS - succinyl coenzyme A synthetase SYNONYMS - succinyl coenzyme A synthetase (GDP-forming) activity SYNONYMS - succinyl coenzyme A synthetase (guanosine diphosphate-forming) activity SYNONYMS - succinyl-CoA synthetase (GDP-forming) activity // UNIQUE-ID - GO:0019789 TYPES - GO:0019787 COMMON-NAME - SUMO ligase activity // UNIQUE-ID - GO:0015288 TYPES - GO:0022829 COMMON-NAME - porin activity SYNONYMS - outer membrane exporter porin SYNONYMS - porin // UNIQUE-ID - GO:0022832 TYPES - GO:0022836 COMMON-NAME - voltage-gated channel activity // UNIQUE-ID - GO:0022834 TYPES - GO:0022836 COMMON-NAME - ligand-gated channel activity // UNIQUE-ID - GO:0022839 TYPES - GO:0022836 COMMON-NAME - ion gated channel activity // UNIQUE-ID - GO:0005244 TYPES - GO:0005216 TYPES - GO:0022832 COMMON-NAME - voltage-gated ion channel activity SYNONYMS - voltage gated ion channel activity SYNONYMS - voltage-dependent ion channel activity // UNIQUE-ID - GO:0015276 TYPES - GO:0005216 TYPES - GO:0022834 COMMON-NAME - ligand-gated ion channel activity SYNONYMS - ionotropic neurotransmitter receptor // UNIQUE-ID - GO:0005253 TYPES - GO:0005216 TYPES - GO:0008509 COMMON-NAME - anion channel activity // UNIQUE-ID - GO:0005261 TYPES - GO:0005216 TYPES - GO:0008324 TYPES - GO:0046873 COMMON-NAME - cation channel activity SYNONYMS - cation diffusion facilitator activity SYNONYMS - nonselective cation channel activity // UNIQUE-ID - GO:0005280 TYPES - GO:0005416 TYPES - GO:0015295 COMMON-NAME - hydrogen:amino acid symporter activity SYNONYMS - cation/amino acid symporter // UNIQUE-ID - GO:0005283 TYPES - GO:0005343 TYPES - GO:0005416 COMMON-NAME - sodium:amino acid symporter activity SYNONYMS - glutamate/aspartate:sodium symporter activity SYNONYMS - isoleucine/valine:sodium symporter activity SYNONYMS - sodium/amino acid transporter SYNONYMS - sodium/excitatory amino acid cotransporter activity SYNONYMS - sodium/excitatory amino acid symporter activity SYNONYMS - sodium:amino acid transporter activity SYNONYMS - threonine/serine:sodium symporter activity // UNIQUE-ID - GO:0005307 TYPES - GO:0015220 TYPES - GO:0015370 COMMON-NAME - choline:sodium symporter activity SYNONYMS - sodium/choline symporter // UNIQUE-ID - GO:0008516 TYPES - GO:0005351 TYPES - GO:0015149 TYPES - GO:0015292 COMMON-NAME - hexose uniporter activity // UNIQUE-ID - GO:0015294 TYPES - GO:0008324 TYPES - GO:0015293 COMMON-NAME - solute:cation symporter activity // UNIQUE-ID - GO:0015296 TYPES - GO:0008509 TYPES - GO:0015294 COMMON-NAME - anion:cation symporter activity // UNIQUE-ID - GO:0005351 TYPES - GO:0051119 TYPES - GO:0005402 TYPES - GO:0015295 COMMON-NAME - sugar:hydrogen symporter activity SYNONYMS - sugar porter activity SYNONYMS - sugar transporter // UNIQUE-ID - GO:0017153 TYPES - GO:0005310 TYPES - GO:0005343 TYPES - GO:0015296 COMMON-NAME - sodium:dicarboxylate symporter activity SYNONYMS - sodium:dicarboxylate cotransporter activity // UNIQUE-ID - GO:0005415 TYPES - GO:0005337 TYPES - GO:0015370 COMMON-NAME - nucleoside:sodium symporter activity SYNONYMS - nucleoside-sodium cotransporter SYNONYMS - sodium-dependent nucleoside transporter // UNIQUE-ID - GO:0008508 TYPES - GO:0005343 TYPES - GO:0015125 COMMON-NAME - bile acid:sodium symporter activity SYNONYMS - sodium/bile acid symporter // UNIQUE-ID - GO:0015300 TYPES - GO:0015297 COMMON-NAME - solute:solute antiporter activity SYNONYMS - solute:solute exchange // UNIQUE-ID - GO:0015301 TYPES - GO:0008509 TYPES - GO:0015297 COMMON-NAME - anion:anion antiporter activity // UNIQUE-ID - GO:0015298 TYPES - GO:0008324 TYPES - GO:0015300 COMMON-NAME - solute:cation antiporter activity // UNIQUE-ID - GO:0005427 TYPES - GO:0015322 COMMON-NAME - proton-dependent oligopeptide secondary active transmembrane transporter activity SYNONYMS - hydrogen/oligopeptide symporter SYNONYMS - proton-dependent oligopeptide transporter activity // UNIQUE-ID - GO:0005310 TYPES - GO:0046943 COMMON-NAME - dicarboxylic acid transmembrane transporter activity SYNONYMS - dicarboxylate (succinate/fumarate/malate) antiporter activity SYNONYMS - dicarboxylate carrier SYNONYMS - dicarboxylic acid permease activity SYNONYMS - sodium:dicarboxylate/tricarboxylate symporter activity // UNIQUE-ID - GO:0008028 TYPES - GO:0046943 COMMON-NAME - monocarboxylic acid transmembrane transporter activity SYNONYMS - monocarboxylate carrier SYNONYMS - prostaglandin/thromboxane transporter activity // UNIQUE-ID - GO:0015142 TYPES - GO:0046943 COMMON-NAME - tricarboxylic acid transmembrane transporter activity SYNONYMS - sodium:dicarboxylate/tricarboxylate symporter activity // UNIQUE-ID - GO:0015171 TYPES - GO:0046943 COMMON-NAME - amino acid transmembrane transporter activity SYNONYMS - amino acid permease activity SYNONYMS - amino acid transporter activity SYNONYMS - amino acid/choline transmembrane transporter activity SYNONYMS - general amino acid permease activity SYNONYMS - hydroxy/aromatic amino acid permease activity // UNIQUE-ID - GO:0015101 TYPES - GO:0008324 COMMON-NAME - organic cation transmembrane transporter activity // UNIQUE-ID - GO:0022890 TYPES - GO:0008324 COMMON-NAME - inorganic cation transmembrane transporter activity // UNIQUE-ID - GO:0046873 TYPES - GO:0008324 COMMON-NAME - metal ion transmembrane transporter activity SYNONYMS - heavy metal ion porter activity SYNONYMS - heavy metal ion transporter activity SYNONYMS - heavy metal ion:hydrogen symporter activity SYNONYMS - heavy metal-exporting ATPase activity SYNONYMS - high affinity metal ion uptake transporter activity SYNONYMS - low affinity metal ion uptake transporter activity // UNIQUE-ID - GO:0008514 TYPES - GO:0008509 COMMON-NAME - organic anion transmembrane transporter activity // UNIQUE-ID - GO:0015103 TYPES - GO:0008509 COMMON-NAME - inorganic anion transmembrane transporter activity // UNIQUE-ID - GO:0015165 TYPES - GO:0005338 COMMON-NAME - pyrimidine nucleotide sugar transmembrane transporter activity // UNIQUE-ID - GO:0015145 TYPES - GO:0051119 COMMON-NAME - monosaccharide transmembrane transporter activity // UNIQUE-ID - GO:0015211 TYPES - GO:0005337 COMMON-NAME - purine nucleoside transmembrane transporter activity // UNIQUE-ID - GO:0005345 TYPES - GO:0015205 COMMON-NAME - purine transmembrane transporter activity // UNIQUE-ID - GO:0005350 TYPES - GO:0015205 COMMON-NAME - pyrimidine transmembrane transporter activity // UNIQUE-ID - GO:0005525 TYPES - GO:0032561 COMMON-NAME - GTP binding // UNIQUE-ID - GO:0019002 TYPES - GO:0032561 COMMON-NAME - GMP binding // UNIQUE-ID - GO:0005524 TYPES - GO:0032559 COMMON-NAME - ATP binding // UNIQUE-ID - GO:0016208 TYPES - GO:0032559 COMMON-NAME - AMP binding // UNIQUE-ID - GO:0030983 TYPES - GO:0003690 COMMON-NAME - mismatched DNA binding // UNIQUE-ID - GO:0030629 TYPES - GO:0017070 COMMON-NAME - U6 snRNA 3'-end binding COMMENT - Note that this term may be useful for annotating small nuclear RNAs (snRNAs). SYNONYMS - U6 snRNA 3' end binding // UNIQUE-ID - GO:0031699 TYPES - GO:0031690 COMMON-NAME - beta-3 adrenergic receptor binding SYNONYMS - beta-3 adrenergic receptor ligand // UNIQUE-ID - GO:0031702 TYPES - GO:0031701 COMMON-NAME - type 1 angiotensin receptor binding SYNONYMS - AT1 receptor binding SYNONYMS - type 1 angiotensin receptor ligand // UNIQUE-ID - GO:0031703 TYPES - GO:0031701 COMMON-NAME - type 2 angiotensin receptor binding SYNONYMS - AT2 receptor binding SYNONYMS - type 2 angiotensin receptor ligand // UNIQUE-ID - GO:0031707 TYPES - GO:0031705 COMMON-NAME - endothelin A receptor binding SYNONYMS - endothelin A receptor ligand SYNONYMS - endothelin-1 receptor binding // UNIQUE-ID - GO:0048020 TYPES - GO:0042379 COMMON-NAME - CCR chemokine receptor binding SYNONYMS - beta chemokine receptor binding SYNONYMS - beta chemokine receptor ligand SYNONYMS - CCR chemokine receptor ligand // UNIQUE-ID - GO:0005152 TYPES - GO:0005149 TYPES - GO:0030353 COMMON-NAME - interleukin-1 receptor antagonist activity SYNONYMS - IL-1ra // UNIQUE-ID - GO:0005127 TYPES - GO:0005126 COMMON-NAME - ciliary neurotrophic factor receptor binding SYNONYMS - ciliary neurotrophic factor SYNONYMS - ciliary neurotrophic factor receptor ligand // UNIQUE-ID - GO:0005128 TYPES - GO:0005126 COMMON-NAME - erythropoietin receptor binding SYNONYMS - erythropoietin SYNONYMS - erythropoietin receptor ligand // UNIQUE-ID - GO:0005132 TYPES - GO:0005126 COMMON-NAME - interferon-alpha/beta receptor binding SYNONYMS - interferon-alpha/beta SYNONYMS - interferon-alpha/beta receptor ligand // UNIQUE-ID - GO:0005133 TYPES - GO:0005126 COMMON-NAME - interferon-gamma receptor binding SYNONYMS - interferon-gamma SYNONYMS - interferon-gamma receptor ligand // UNIQUE-ID - GO:0005144 TYPES - GO:0005126 COMMON-NAME - interleukin-13 receptor binding SYNONYMS - IL-13 SYNONYMS - interleukin-13 receptor ligand // UNIQUE-ID - GO:0005146 TYPES - GO:0005126 COMMON-NAME - leukemia inhibitory factor receptor binding SYNONYMS - leukemia inhibitory factor SYNONYMS - leukemia inhibitory factor receptor ligand // UNIQUE-ID - GO:0005147 TYPES - GO:0005126 COMMON-NAME - oncostatin-M receptor binding SYNONYMS - oncostatin-M SYNONYMS - oncostatin-M receptor ligand // UNIQUE-ID - GO:0030380 TYPES - GO:0005126 COMMON-NAME - interleukin-17E receptor binding SYNONYMS - IL-17E SYNONYMS - interleukin-17E receptor ligand // UNIQUE-ID - GO:0005164 TYPES - GO:0032813 COMMON-NAME - tumor necrosis factor receptor binding SYNONYMS - TNF receptor binding SYNONYMS - tumor necrosis factor SYNONYMS - tumor necrosis factor receptor ligand // UNIQUE-ID - GO:0005185 TYPES - GO:0005184 COMMON-NAME - neurohypophyseal hormone activity // UNIQUE-ID - GO:0018445 TYPES - GO:0005184 COMMON-NAME - prothoracicotrophic hormone activity // UNIQUE-ID - GO:0035258 TYPES - GO:0035257 COMMON-NAME - steroid hormone receptor binding // UNIQUE-ID - GO:0051010 TYPES - GO:0008017 COMMON-NAME - microtubule plus-end binding // UNIQUE-ID - GO:0051011 TYPES - GO:0008017 COMMON-NAME - microtubule minus-end binding // UNIQUE-ID - GO:0004909 TYPES - GO:0004908 TYPES - GO:0019967 COMMON-NAME - interleukin-1, Type I, activating receptor activity SYNONYMS - IL-1 type I, activating receptor // UNIQUE-ID - GO:0004910 TYPES - GO:0004908 TYPES - GO:0019968 COMMON-NAME - interleukin-1, Type II, blocking receptor activity SYNONYMS - IL-1 type II, blocking receptor // UNIQUE-ID - GO:0005080 TYPES - GO:0019901 COMMON-NAME - protein kinase C binding SYNONYMS - PKC binding // UNIQUE-ID - GO:0008432 TYPES - GO:0019901 COMMON-NAME - JUN kinase binding // UNIQUE-ID - GO:0051018 TYPES - GO:0019901 COMMON-NAME - protein kinase A binding SYNONYMS - PKA binding SYNONYMS - protein kinase A anchoring activity // UNIQUE-ID - GO:0051019 TYPES - GO:0019901 COMMON-NAME - mitogen-activated protein kinase binding SYNONYMS - MAP kinase binding SYNONYMS - MAP-kinase anchoring activity SYNONYMS - MAPK binding // UNIQUE-ID - GO:0017016 TYPES - GO:0031267 COMMON-NAME - Ras GTPase binding SYNONYMS - Ras interactor activity // UNIQUE-ID - GO:0004905 TYPES - GO:0004904 TYPES - GO:0019962 COMMON-NAME - interferon-alpha/beta receptor activity // UNIQUE-ID - GO:0042020 TYPES - GO:0004907 TYPES - GO:0042019 COMMON-NAME - interleukin-23 receptor activity SYNONYMS - IL-23R // UNIQUE-ID - GO:0045509 TYPES - GO:0004907 TYPES - GO:0045513 COMMON-NAME - interleukin-27 receptor activity SYNONYMS - IL-27R // UNIQUE-ID - GO:0042163 TYPES - GO:0019972 COMMON-NAME - interleukin-12 beta subunit binding SYNONYMS - CLMFp40 binding SYNONYMS - IL-12B binding SYNONYMS - IL-12p40 binding SYNONYMS - NKSFp40 binding // UNIQUE-ID - GO:0042164 TYPES - GO:0019972 COMMON-NAME - interleukin-12 alpha subunit binding SYNONYMS - CLMFp35 binding SYNONYMS - IL-12A binding SYNONYMS - IL-12p35 binding SYNONYMS - NKSFp35 binding // UNIQUE-ID - GO:0019767 TYPES - GO:0019763 TYPES - GO:0019863 COMMON-NAME - IgE receptor activity // UNIQUE-ID - GO:0019770 TYPES - GO:0019763 TYPES - GO:0019864 COMMON-NAME - IgG receptor activity // UNIQUE-ID - GO:0030955 TYPES - GO:0031420 COMMON-NAME - potassium ion binding // UNIQUE-ID - GO:0031402 TYPES - GO:0031420 COMMON-NAME - sodium ion binding // UNIQUE-ID - GO:0031403 TYPES - GO:0031420 COMMON-NAME - lithium ion binding // UNIQUE-ID - GO:0005506 TYPES - GO:0046914 COMMON-NAME - iron ion binding SYNONYMS - iron binding // UNIQUE-ID - GO:0005507 TYPES - GO:0046914 COMMON-NAME - copper ion binding SYNONYMS - copper binding SYNONYMS - copper/cadmium binding // UNIQUE-ID - GO:0008270 TYPES - GO:0046914 COMMON-NAME - zinc ion binding SYNONYMS - zinc binding // UNIQUE-ID - GO:0016151 TYPES - GO:0046914 COMMON-NAME - nickel ion binding SYNONYMS - nickel binding // UNIQUE-ID - GO:0030145 TYPES - GO:0046914 COMMON-NAME - manganese ion binding SYNONYMS - manganese binding // UNIQUE-ID - GO:0030151 TYPES - GO:0046914 COMMON-NAME - molybdenum ion binding SYNONYMS - molybdenum binding // UNIQUE-ID - GO:0050897 TYPES - GO:0046914 COMMON-NAME - cobalt ion binding SYNONYMS - cobalt binding // UNIQUE-ID - GO:0030304 TYPES - GO:0004867 COMMON-NAME - trypsin inhibitor activity // UNIQUE-ID - GO:0030161 TYPES - GO:0004869 COMMON-NAME - calpain inhibitor activity // UNIQUE-ID - GO:0030675 TYPES - GO:0005100 COMMON-NAME - Rac GTPase activator activity // UNIQUE-ID - GO:0030676 TYPES - GO:0005089 COMMON-NAME - Rac guanyl-nucleotide exchange factor activity // UNIQUE-ID - GO:0004882 TYPES - GO:0003707 COMMON-NAME - androgen receptor activity COMMENT - Note that this term represents a function and not a gene product. Consider also annotating to the molecular function term 'transcription regulator activity ; GO:0030528'. // UNIQUE-ID - GO:0004883 TYPES - GO:0003707 COMMON-NAME - glucocorticoid receptor activity COMMENT - Note that this term represents a function and not a gene product. Consider also annotating to the molecular function term 'transcription regulator activity ; GO:0030528'. // UNIQUE-ID - GO:0004884 TYPES - GO:0003707 COMMON-NAME - ecdysteroid hormone receptor activity COMMENT - Note that this term represents a function and not a gene product. Consider also annotating to the molecular function term 'transcription regulator activity ; GO:0030528'. // UNIQUE-ID - GO:0004924 TYPES - GO:0004896 COMMON-NAME - oncostatin-M receptor activity // UNIQUE-ID - GO:0004925 TYPES - GO:0004896 COMMON-NAME - prolactin receptor activity // UNIQUE-ID - GO:0001633 TYPES - GO:0004930 COMMON-NAME - secretin-like receptor activity SYNONYMS - class B G protein coupled receptor SYNONYMS - class B G-protein coupled receptor SYNONYMS - class B GPCR SYNONYMS - class B orphan receptor activity // UNIQUE-ID - GO:0008067 TYPES - GO:0004930 TYPES - GO:0008066 COMMON-NAME - metabotropic glutamate, GABA-B-like receptor activity SYNONYMS - class C G protein coupled receptor SYNONYMS - class C G-protein coupled receptor SYNONYMS - class C GPCR SYNONYMS - class C orphan receptor activity // UNIQUE-ID - GO:0016503 TYPES - GO:0004930 COMMON-NAME - pheromone receptor activity // UNIQUE-ID - GO:0045125 TYPES - GO:0004930 COMMON-NAME - bioactive lipid receptor activity // UNIQUE-ID - GO:0004965 TYPES - GO:0008067 TYPES - GO:0016917 COMMON-NAME - GABA-B receptor activity // UNIQUE-ID - GO:0004970 TYPES - GO:0008066 COMMON-NAME - ionotropic glutamate receptor activity COMMENT - Note that this term represents an activity and not a gene product. Consider also annotating to the molecular function terms 'glutamate-gated ion channel activity ; GO:0005234' and 'cation channel activity ; GO:0005261'. // UNIQUE-ID - GO:0001614 TYPES - GO:0016502 COMMON-NAME - purinergic nucleotide receptor activity SYNONYMS - P2Y receptor SYNONYMS - purinoceptor // UNIQUE-ID - GO:0004890 TYPES - GO:0016917 COMMON-NAME - GABA-A receptor activity COMMENT - Note that this term represents an activity and not a gene product. Consider also annotating to the molecular function term 'chloride channel activity ; GO:0005254' and 'inhibitory extracellular ligand-gated ion channel activity ; GO:0005237'. // UNIQUE-ID - GO:0030550 TYPES - GO:0030547 TYPES - GO:0030548 COMMON-NAME - acetylcholine receptor inhibitor activity // UNIQUE-ID - GO:0005792 TYPES - GO:0042598 COMMON-NAME - microsome COMMENT - Note that this term refers to disrupted cells, and does not necessarily correspond to any specific structure(s) in an intact cell. // UNIQUE-ID - GO:0006007 TYPES - GO:0006006 TYPES - GO:0019320 COMMON-NAME - glucose catabolic process // UNIQUE-ID - GO:0006094 TYPES - GO:0006006 TYPES - GO:0006090 TYPES - GO:0019319 COMMON-NAME - gluconeogenesis SYNONYMS - glucose biosynthesis // UNIQUE-ID - GO:0006261 TYPES - GO:0006260 COMMON-NAME - DNA-dependent DNA replication // UNIQUE-ID - GO:0034470 TYPES - GO:0006396 COMMON-NAME - ncRNA processing // UNIQUE-ID - GO:0006399 TYPES - GO:0034660 COMMON-NAME - tRNA metabolic process // UNIQUE-ID - GO:0043039 TYPES - GO:0006399 TYPES - GO:0043038 COMMON-NAME - tRNA aminoacylation SYNONYMS - tRNA charging // UNIQUE-ID - GO:0009163 TYPES - GO:0009116 TYPES - GO:0034404 COMMON-NAME - nucleoside biosynthetic process // UNIQUE-ID - GO:0009117 TYPES - GO:0006753 COMMON-NAME - nucleotide metabolic process // UNIQUE-ID - GO:0006746 TYPES - GO:0006733 TYPES - GO:0009117 COMMON-NAME - FADH2 metabolic process // UNIQUE-ID - GO:0019362 TYPES - GO:0006733 TYPES - GO:0009117 COMMON-NAME - pyridine nucleotide metabolic process // UNIQUE-ID - GO:0009152 TYPES - GO:0006164 TYPES - GO:0009150 TYPES - GO:0009260 COMMON-NAME - purine ribonucleotide biosynthetic process // UNIQUE-ID - GO:0009156 TYPES - GO:0009124 TYPES - GO:0009161 TYPES - GO:0009260 COMMON-NAME - ribonucleoside monophosphate biosynthetic process SYNONYMS - ribonucleoside monophosphate anabolism SYNONYMS - ribonucleoside monophosphate formation SYNONYMS - ribonucleoside monophosphate synthesis // UNIQUE-ID - GO:0009265 TYPES - GO:0009263 TYPES - GO:0009394 COMMON-NAME - 2'-deoxyribonucleotide biosynthetic process // UNIQUE-ID - GO:0019359 TYPES - GO:0019363 TYPES - GO:0046496 COMMON-NAME - nicotinamide nucleotide biosynthetic process SYNONYMS - nicotinamide nucleotide anabolism SYNONYMS - nicotinamide nucleotide biosynthesis SYNONYMS - nicotinamide nucleotide formation SYNONYMS - nicotinamide nucleotide synthesis // UNIQUE-ID - GO:0009435 TYPES - GO:0019674 TYPES - GO:0019359 COMMON-NAME - NAD biosynthetic process SYNONYMS - NAD (oxidized) biosynthesis SYNONYMS - NAD (reduced) biosynthesis SYNONYMS - NADH biosynthesis SYNONYMS - nicotinamide adenine dinucleotide biosynthesis SYNONYMS - oxidized NAD biosynthesis SYNONYMS - oxidized nicotinamide adenine dinucleotide biosynthesis SYNONYMS - reduced NAD biosynthesis SYNONYMS - reduced nicotinamide adenine dinucleotide biosynthesis // UNIQUE-ID - GO:0015936 TYPES - GO:0006752 TYPES - GO:0033865 TYPES - GO:0046128 COMMON-NAME - coenzyme A metabolic process // UNIQUE-ID - GO:0015937 TYPES - GO:0009108 TYPES - GO:0015936 COMMON-NAME - coenzyme A biosynthetic process // UNIQUE-ID - GO:0009119 TYPES - GO:0009116 COMMON-NAME - ribonucleoside metabolic process // UNIQUE-ID - GO:0042278 TYPES - GO:0009116 COMMON-NAME - purine nucleoside metabolic process SYNONYMS - purine metabolism // UNIQUE-ID - GO:0009442 TYPES - GO:0000256 COMMON-NAME - allantoin assimilation pathway // UNIQUE-ID - GO:0006024 TYPES - GO:0006023 TYPES - GO:0030203 COMMON-NAME - glycosaminoglycan biosynthetic process SYNONYMS - glycosaminoglycan anabolism SYNONYMS - glycosaminoglycan biosynthesis SYNONYMS - glycosaminoglycan formation SYNONYMS - glycosaminoglycan synthesis // UNIQUE-ID - GO:0000270 TYPES - GO:0030203 COMMON-NAME - peptidoglycan metabolic process SYNONYMS - murein metabolism // UNIQUE-ID - GO:0009067 TYPES - GO:0009066 TYPES - GO:0008652 COMMON-NAME - aspartate family amino acid biosynthetic process // UNIQUE-ID - GO:0009070 TYPES - GO:0009069 TYPES - GO:0008652 COMMON-NAME - serine family amino acid biosynthetic process // UNIQUE-ID - GO:0009076 TYPES - GO:0009075 TYPES - GO:0008652 COMMON-NAME - histidine family amino acid biosynthetic process // UNIQUE-ID - GO:0009079 TYPES - GO:0009078 TYPES - GO:0008652 COMMON-NAME - pyruvate family amino acid biosynthetic process // UNIQUE-ID - GO:0009082 TYPES - GO:0009081 TYPES - GO:0008652 COMMON-NAME - branched chain family amino acid biosynthetic process // UNIQUE-ID - GO:0009084 TYPES - GO:0008652 TYPES - GO:0009064 COMMON-NAME - glutamine family amino acid biosynthetic process // UNIQUE-ID - GO:0009086 TYPES - GO:0000097 TYPES - GO:0006555 TYPES - GO:0009067 COMMON-NAME - methionine biosynthetic process // UNIQUE-ID - GO:0019344 TYPES - GO:0000097 TYPES - GO:0006534 TYPES - GO:0009070 COMMON-NAME - cysteine biosynthetic process // UNIQUE-ID - GO:0000162 TYPES - GO:0006568 TYPES - GO:0009073 TYPES - GO:0046219 COMMON-NAME - tryptophan biosynthetic process // UNIQUE-ID - GO:0009095 TYPES - GO:0009073 COMMON-NAME - aromatic amino acid family biosynthetic process, prephenate pathway SYNONYMS - aromatic amino acid family anabolism, prephenate pathway SYNONYMS - aromatic amino acid family formation, prephenate pathway SYNONYMS - aromatic amino acid family synthesis, prephenate pathway // UNIQUE-ID - GO:0009096 TYPES - GO:0009073 COMMON-NAME - aromatic amino acid family biosynthesis, anthranilate pathway // UNIQUE-ID - GO:0016089 TYPES - GO:0009073 COMMON-NAME - aromatic amino acid family biosynthesis, shikimate pathway // UNIQUE-ID - GO:0006571 TYPES - GO:0009095 TYPES - GO:0006570 COMMON-NAME - tyrosine biosynthetic process // UNIQUE-ID - GO:0009094 TYPES - GO:0009095 TYPES - GO:0006558 COMMON-NAME - L-phenylalanine biosynthetic process SYNONYMS - phenylalanine biosynthesis // UNIQUE-ID - GO:0006578 TYPES - GO:0006577 TYPES - GO:0042401 COMMON-NAME - betaine biosynthetic process SYNONYMS - N-trimethylglycine biosynthesis SYNONYMS - glycine betaine biosynthesis // UNIQUE-ID - GO:0006596 TYPES - GO:0006595 TYPES - GO:0042401 COMMON-NAME - polyamine biosynthetic process // UNIQUE-ID - GO:0006579 TYPES - GO:0042402 TYPES - GO:0006577 COMMON-NAME - betaine catabolic process SYNONYMS - betaine breakdown SYNONYMS - betaine catabolism SYNONYMS - betaine degradation // UNIQUE-ID - GO:0006598 TYPES - GO:0006595 TYPES - GO:0042402 COMMON-NAME - polyamine catabolic process // UNIQUE-ID - GO:0042413 TYPES - GO:0006579 TYPES - GO:0009437 COMMON-NAME - carnitine catabolic process SYNONYMS - vitamin Bt catabolism // UNIQUE-ID - GO:0006525 TYPES - GO:0009064 COMMON-NAME - arginine metabolic process // UNIQUE-ID - GO:0006536 TYPES - GO:0009064 COMMON-NAME - glutamate metabolic process SYNONYMS - glutamic acid metabolism // UNIQUE-ID - GO:0006541 TYPES - GO:0009064 COMMON-NAME - glutamine metabolic process // UNIQUE-ID - GO:0006528 TYPES - GO:0009066 COMMON-NAME - asparagine metabolic process // UNIQUE-ID - GO:0006531 TYPES - GO:0009066 COMMON-NAME - aspartate metabolic process // UNIQUE-ID - GO:0006553 TYPES - GO:0009066 COMMON-NAME - lysine metabolic process // UNIQUE-ID - GO:0006566 TYPES - GO:0009066 COMMON-NAME - threonine metabolic process // UNIQUE-ID - GO:0006544 TYPES - GO:0009069 COMMON-NAME - glycine metabolic process // UNIQUE-ID - GO:0006563 TYPES - GO:0009069 COMMON-NAME - L-serine metabolic process // UNIQUE-ID - GO:0009092 TYPES - GO:0009069 COMMON-NAME - homoserine metabolic process // UNIQUE-ID - GO:0006522 TYPES - GO:0009078 COMMON-NAME - alanine metabolic process // UNIQUE-ID - GO:0006551 TYPES - GO:0009081 COMMON-NAME - leucine metabolic process // UNIQUE-ID - GO:0006573 TYPES - GO:0009081 COMMON-NAME - valine metabolic process // UNIQUE-ID - GO:0006577 TYPES - GO:0006576 TYPES - GO:0019752 COMMON-NAME - betaine metabolic process SYNONYMS - N-trimethylglycine metabolism SYNONYMS - glycine betaine metabolism // UNIQUE-ID - GO:0006595 TYPES - GO:0006576 COMMON-NAME - polyamine metabolic process // UNIQUE-ID - GO:0009236 TYPES - GO:0006779 TYPES - GO:0009235 TYPES - GO:0042364 COMMON-NAME - cobalamin biosynthetic process SYNONYMS - vitamin B12 biosynthesis // UNIQUE-ID - GO:0006777 TYPES - GO:0009108 TYPES - GO:0019720 TYPES - GO:0032324 COMMON-NAME - Mo-molybdopterin cofactor biosynthetic process SYNONYMS - molybdopterin cofactor biosynthesis // UNIQUE-ID - GO:0009257 TYPES - GO:0009256 TYPES - GO:0046654 COMMON-NAME - 10-formyltetrahydrofolate biosynthetic process SYNONYMS - 10-formyl-THF biosynthesis // UNIQUE-ID - GO:0051603 TYPES - GO:0006508 TYPES - GO:0044257 COMMON-NAME - proteolysis during cellular protein catabolism SYNONYMS - peptidolysis during cellular protein catabolism // UNIQUE-ID - GO:0019626 TYPES - GO:0009062 TYPES - GO:0046459 COMMON-NAME - short-chain fatty acid catabolic process SYNONYMS - short-chain fatty acid breakdown SYNONYMS - short-chain fatty acid catabolism SYNONYMS - short-chain fatty acid degradation // UNIQUE-ID - GO:0042867 TYPES - GO:0006090 TYPES - GO:0046395 COMMON-NAME - pyruvate catabolic process // UNIQUE-ID - GO:0045733 TYPES - GO:0006083 TYPES - GO:0046395 COMMON-NAME - acetate catabolic process // UNIQUE-ID - GO:0046356 TYPES - GO:0006084 TYPES - GO:0009109 COMMON-NAME - acetyl-CoA catabolic process // UNIQUE-ID - GO:0006654 TYPES - GO:0046394 TYPES - GO:0046473 TYPES - GO:0046474 COMMON-NAME - phosphatidic acid biosynthetic process // UNIQUE-ID - GO:0009242 TYPES - GO:0033692 TYPES - GO:0046377 COMMON-NAME - colanic acid biosynthetic process SYNONYMS - M antigen biosynthesis // UNIQUE-ID - GO:0009243 TYPES - GO:0046402 TYPES - GO:0033692 COMMON-NAME - O antigen biosynthetic process // UNIQUE-ID - GO:0009246 TYPES - GO:0033692 TYPES - GO:0046378 COMMON-NAME - enterobacterial common antigen biosynthetic process // UNIQUE-ID - GO:0009248 TYPES - GO:0033692 TYPES - GO:0046375 COMMON-NAME - K antigen biosynthetic process // UNIQUE-ID - GO:0009250 TYPES - GO:0006073 TYPES - GO:0033692 COMMON-NAME - glucan biosynthetic process // UNIQUE-ID - GO:0008615 TYPES - GO:0008614 TYPES - GO:0042819 COMMON-NAME - pyridoxine biosynthetic process SYNONYMS - vitamin B6 biosynthesis // UNIQUE-ID - GO:0043650 TYPES - GO:0046394 TYPES - GO:0043648 COMMON-NAME - dicarboxylic acid biosynthetic process SYNONYMS - dicarboxylate biosynthesis SYNONYMS - dicarboxylate biosynthetic process SYNONYMS - dicarboxylic acid anabolism SYNONYMS - dicarboxylic acid biosynthesis SYNONYMS - dicarboxylic acid formation SYNONYMS - dicarboxylic acid synthesis // UNIQUE-ID - GO:0009107 TYPES - GO:0009105 TYPES - GO:0009106 COMMON-NAME - lipoate biosynthetic process // UNIQUE-ID - GO:0006085 TYPES - GO:0006084 TYPES - GO:0009108 COMMON-NAME - acetyl-CoA biosynthetic process // UNIQUE-ID - GO:0032787 TYPES - GO:0019752 COMMON-NAME - monocarboxylic acid metabolic process SYNONYMS - monocarboxylate metabolic process SYNONYMS - monocarboxylic acid metabolism // UNIQUE-ID - GO:0043648 TYPES - GO:0019752 COMMON-NAME - dicarboxylic acid metabolic process SYNONYMS - dicarboxylate metabolic process SYNONYMS - dicarboxylate metabolism SYNONYMS - dicarboxylic acid metabolism // UNIQUE-ID - GO:0019605 TYPES - GO:0046459 COMMON-NAME - butyrate metabolic process // UNIQUE-ID - GO:0009060 TYPES - GO:0045333 COMMON-NAME - aerobic respiration // UNIQUE-ID - GO:0009061 TYPES - GO:0045333 COMMON-NAME - anaerobic respiration // UNIQUE-ID - GO:0042727 TYPES - GO:0042726 COMMON-NAME - riboflavin and derivative biosynthetic process SYNONYMS - riboflavin and derivative anabolism SYNONYMS - riboflavin and derivative formation SYNONYMS - riboflavin and derivative synthesis SYNONYMS - vitamin B2 and derivative biosynthesis // UNIQUE-ID - GO:0006826 TYPES - GO:0000041 TYPES - GO:0015674 COMMON-NAME - iron ion transport SYNONYMS - iron transport // UNIQUE-ID - GO:0000041 TYPES - GO:0030001 COMMON-NAME - transition metal ion transport SYNONYMS - transition metal transport // UNIQUE-ID - GO:0015700 TYPES - GO:0015698 COMMON-NAME - arsenite transport // UNIQUE-ID - GO:0045449 TYPES - GO:0019219 TYPES - GO:0010468 TYPES - GO:0010556 TYPES - GO:0031326 COMMON-NAME - regulation of transcription // UNIQUE-ID - GO:0006355 TYPES - GO:0045449 TYPES - GO:0051252 COMMON-NAME - regulation of transcription, DNA-dependent // UNIQUE-ID - Caffeine-Biosynthesis TYPES - PURINE-ALKALOIDS COMMON-NAME - Caffeine Biosynthesis COMMENT - This class holds pathways for the biosynthesis of caffeine // UNIQUE-ID - EC-1.1 TYPES - EC-1 COMMON-NAME - 1.1 -- Acting on the CH-OH group of donors // UNIQUE-ID - EC-1.10 TYPES - EC-1 COMMON-NAME - 1.10 -- Acting on diphenols and related substances as donors // UNIQUE-ID - EC-1.11 TYPES - EC-1 COMMON-NAME - 1.11 -- Acting on a peroxide as acceptor // UNIQUE-ID - EC-1.12 TYPES - EC-1 COMMON-NAME - 1.12 -- Acting on hydrogen as donor // UNIQUE-ID - EC-1.13 TYPES - EC-1 COMMON-NAME - 1.13 -- Acting on single donors with incorporation of molecular oxygen // UNIQUE-ID - EC-1.14 TYPES - EC-1 COMMON-NAME - 1.14 -- Acting on paired donors, with incorporation or reduction of molecular oxygen // UNIQUE-ID - EC-1.15 TYPES - EC-1 COMMON-NAME - 1.15 -- Acting on superoxide as acceptor // UNIQUE-ID - EC-1.16 TYPES - EC-1 COMMON-NAME - 1.16 -- Oxidizing metal ions // UNIQUE-ID - EC-1.17 TYPES - EC-1 COMMON-NAME - 1.17 -- Acting on CH or CH(2) groups // UNIQUE-ID - EC-1.18 TYPES - EC-1 COMMON-NAME - 1.18 -- Acting on iron-sulfur proteins as donors // UNIQUE-ID - EC-1.19 TYPES - EC-1 COMMON-NAME - 1.19 -- Acting on reduced flavodoxin as donor // UNIQUE-ID - EC-1.2 TYPES - EC-1 COMMON-NAME - 1.2 -- Acting on the aldehyde or oxo group of donors // UNIQUE-ID - EC-1.20 TYPES - EC-1 COMMON-NAME - 1.20 -- Acting on phosphorus or arsenic in donors // UNIQUE-ID - EC-1.21 TYPES - EC-1 COMMON-NAME - 1.21 -- Acting on x-H and y-H to form an x-y bond // UNIQUE-ID - EC-1.3 TYPES - EC-1 COMMON-NAME - 1.3 -- Acting on the CH-CH group of donors // UNIQUE-ID - EC-1.4 TYPES - EC-1 COMMON-NAME - 1.4 -- Acting on the CH-NH(2) group of donors // UNIQUE-ID - EC-1.5 TYPES - EC-1 COMMON-NAME - 1.5 -- Acting on the CH-NH group of donors // UNIQUE-ID - EC-1.6 TYPES - EC-1 COMMON-NAME - 1.6 -- Acting on NADH or NADPH // UNIQUE-ID - EC-1.7 TYPES - EC-1 COMMON-NAME - 1.7 -- Acting on other nitrogenous compounds as donors // UNIQUE-ID - EC-1.8 TYPES - EC-1 COMMON-NAME - 1.8 -- Acting on a sulfur group of donors // UNIQUE-ID - EC-1.9 TYPES - EC-1 COMMON-NAME - 1.9 -- Acting on a heme group of donors // UNIQUE-ID - EC-1.97 TYPES - EC-1 COMMON-NAME - 1.97 -- Other oxidoreductases // UNIQUE-ID - EC-2.1 TYPES - EC-2 COMMON-NAME - 2.1 -- Transferring one-carbon groups // UNIQUE-ID - EC-2.2 TYPES - EC-2 COMMON-NAME - 2.2 -- Transferring aldehyde or ketone residues // UNIQUE-ID - EC-2.3 TYPES - EC-2 COMMON-NAME - 2.3 -- Acyltransferases // UNIQUE-ID - EC-2.4 TYPES - EC-2 COMMON-NAME - 2.4 -- Glycosyltransferases // UNIQUE-ID - EC-2.5 TYPES - EC-2 COMMON-NAME - 2.5 -- Transferring alkyl or aryl groups, other than methyl groups // UNIQUE-ID - EC-2.6 TYPES - EC-2 COMMON-NAME - 2.6 -- Transferring nitrogenous groups // UNIQUE-ID - EC-2.7 TYPES - EC-2 COMMON-NAME - 2.7 -- Transferring phosphorous-containing groups // UNIQUE-ID - EC-2.8 TYPES - EC-2 COMMON-NAME - 2.8 -- Transferring sulfur-containing groups // UNIQUE-ID - EC-2.9 TYPES - EC-2 COMMON-NAME - 2.9 -- Transferring selenium-containing groups // UNIQUE-ID - EC-3.1 TYPES - EC-3 COMMON-NAME - 3.1 -- Acting on ester bonds // UNIQUE-ID - EC-3.10 TYPES - EC-3 COMMON-NAME - 3.10 -- Acting on sulfur-nitrogen bonds // UNIQUE-ID - EC-3.11 TYPES - EC-3 COMMON-NAME - 3.11 -- Acting on carbon-phosphorus bonds // UNIQUE-ID - EC-3.12 TYPES - EC-3 COMMON-NAME - 3.12 -- Acting on sulfur-sulfur bonds // UNIQUE-ID - EC-3.13 TYPES - EC-3 COMMON-NAME - 3.13 -- Acting on carbon-sulfur bonds // UNIQUE-ID - EC-3.2 TYPES - EC-3 COMMON-NAME - 3.2 -- Glycosylases // UNIQUE-ID - EC-3.3 TYPES - EC-3 COMMON-NAME - 3.3 -- Acting on ether bonds // UNIQUE-ID - EC-3.4 TYPES - EC-3 COMMON-NAME - 3.4 -- Acting on peptide bonds (peptide hydrolases) // UNIQUE-ID - EC-3.5 TYPES - EC-3 COMMON-NAME - 3.5 -- Acting on carbon-nitrogen bonds, other than peptide bonds // UNIQUE-ID - EC-3.6 TYPES - EC-3 COMMON-NAME - 3.6 -- Acting on acid anhydrides // UNIQUE-ID - EC-3.7 TYPES - EC-3 COMMON-NAME - 3.7 -- Acting on carbon-carbon bonds // UNIQUE-ID - EC-3.8 TYPES - EC-3 COMMON-NAME - 3.8 -- Acting on halide bonds // UNIQUE-ID - EC-3.9 TYPES - EC-3 COMMON-NAME - 3.9 -- Acting on phosphorus-nitrogen bonds // UNIQUE-ID - EC-4.1 TYPES - EC-4 COMMON-NAME - 4.1 -- Carbon-carbon lyases // UNIQUE-ID - EC-4.2 TYPES - EC-4 COMMON-NAME - 4.2 -- Carbon-oxygen lyases // UNIQUE-ID - EC-4.3 TYPES - EC-4 COMMON-NAME - 4.3 -- Carbon-nitrogen lyases // UNIQUE-ID - EC-4.4 TYPES - EC-4 COMMON-NAME - 4.4 -- Carbon-sulfur lyases // UNIQUE-ID - EC-4.5 TYPES - EC-4 COMMON-NAME - 4.5 -- Carbon-halide lyases // UNIQUE-ID - EC-4.6 TYPES - EC-4 COMMON-NAME - 4.6 -- Phosphorus-oxygen lyases // UNIQUE-ID - EC-4.99 TYPES - EC-4 COMMON-NAME - 4.99 -- Other lyases // UNIQUE-ID - EC-5.1 TYPES - EC-5 COMMON-NAME - 5.1 -- Racemases and epimerases // UNIQUE-ID - EC-5.2 TYPES - EC-5 COMMON-NAME - 5.2 -- Cis-trans-isomerases // UNIQUE-ID - EC-5.3 TYPES - EC-5 COMMON-NAME - 5.3 -- Intramolecular oxidoreductases // UNIQUE-ID - EC-5.4 TYPES - EC-5 COMMON-NAME - 5.4 -- Intramolecular transferases (mutases) // UNIQUE-ID - EC-5.5 TYPES - EC-5 COMMON-NAME - 5.5 -- Intramolecular lyases // UNIQUE-ID - EC-5.99 TYPES - EC-5 COMMON-NAME - 5.99 -- Other isomerases // UNIQUE-ID - EC-6.1 TYPES - EC-6 COMMON-NAME - 6.1 -- Forming carbon-oxygen bonds // UNIQUE-ID - EC-6.2 TYPES - EC-6 COMMON-NAME - 6.2 -- Forming carbon-sulfur bonds // UNIQUE-ID - EC-6.3 TYPES - EC-6 COMMON-NAME - 6.3 -- Forming carbon-nitrogen bonds // UNIQUE-ID - EC-6.4 TYPES - EC-6 COMMON-NAME - 6.4 -- Forming carbon-carbon bonds // UNIQUE-ID - EC-6.5 TYPES - EC-6 COMMON-NAME - 6.5 -- Forming phosphoric ester bonds // UNIQUE-ID - EC-6.6 TYPES - EC-6 COMMON-NAME - 6.6 -- Forming nitrogen-metal bonds // UNIQUE-ID - tRNA-Charging-Reactions TYPES - tRNA-Reactions COMMENT - Reactions in which an uncharged tRNA binds its amino acid to form a charged tRNA. // UNIQUE-ID - TAX-3193 TYPES - TAX-131221 COMMON-NAME - Embryophyta SYNONYMS - plants SYNONYMS - land plants SYNONYMS - higher plants // UNIQUE-ID - TAX-33213 TYPES - TAX-6072 COMMON-NAME - Bilateria // UNIQUE-ID - BC-1.1.1 TYPES - BC-1.1 COMMON-NAME - carbon compounds // UNIQUE-ID - BC-1.1.2 TYPES - BC-1.1 COMMON-NAME - fatty acids // UNIQUE-ID - BC-1.1.3 TYPES - BC-1.1 COMMON-NAME - amino acids // UNIQUE-ID - BC-1.1.4 TYPES - BC-1.1 COMMON-NAME - amines // UNIQUE-ID - BC-1.1.5 TYPES - BC-1.1 COMMON-NAME - other compounds // UNIQUE-ID - BC-1.2.1 TYPES - BC-1.2 COMMON-NAME - RNA // UNIQUE-ID - BC-1.2.2 TYPES - BC-1.2 COMMON-NAME - DNA // UNIQUE-ID - BC-1.2.3 TYPES - BC-1.2 COMMON-NAME - proteins/peptides/glycopeptides // UNIQUE-ID - BC-1.2.4 TYPES - BC-1.2 COMMON-NAME - polysaccharides // UNIQUE-ID - BC-1.3.1 TYPES - BC-1.3 COMMON-NAME - glycolysis // UNIQUE-ID - BC-1.3.2 TYPES - BC-1.3 COMMON-NAME - pentose pwy, oxidative branch // UNIQUE-ID - BC-1.3.3 TYPES - BC-1.3 COMMON-NAME - pyruvate dehydrogenase // UNIQUE-ID - BC-1.3.4 TYPES - BC-1.3 COMMON-NAME - TCA cycle // UNIQUE-ID - BC-1.3.5 TYPES - BC-1.3 COMMON-NAME - fermentation // UNIQUE-ID - BC-1.3.6 TYPES - BC-1.3 COMMON-NAME - aerobic respiration // UNIQUE-ID - BC-1.3.7 TYPES - BC-1.3 COMMON-NAME - anaerobic respiration // UNIQUE-ID - BC-1.3.8 TYPES - BC-1.3 COMMON-NAME - ATP proton motive force interconversion // UNIQUE-ID - BC-1.3.9 TYPES - BC-1.3 COMMON-NAME - Entner-Doudoroff // UNIQUE-ID - BC-1.4.1 TYPES - BC-1.4 COMMON-NAME - electron donors // UNIQUE-ID - BC-1.4.2 TYPES - BC-1.4 COMMON-NAME - electron acceptors // UNIQUE-ID - BC-1.4.3 TYPES - BC-1.4 COMMON-NAME - electron carriers // UNIQUE-ID - BC-1.5.1 TYPES - BC-1.5 COMMON-NAME - amino acids // UNIQUE-ID - BC-1.5.2 TYPES - BC-1.5 COMMON-NAME - nucleotides // UNIQUE-ID - BC-1.5.3 TYPES - BC-1.5 COMMON-NAME - cofactors, small molecule carriers // UNIQUE-ID - BC-1.5.4 TYPES - BC-1.5 COMMON-NAME - fatty acids and phosphatidic acid // UNIQUE-ID - BC-1.6.1 TYPES - BC-1.6 COMMON-NAME - phospholipid // UNIQUE-ID - BC-1.6.10 TYPES - BC-1.6 COMMON-NAME - lipoprotein // UNIQUE-ID - BC-1.6.11 TYPES - BC-1.6 COMMON-NAME - glycoprotein // UNIQUE-ID - BC-1.6.12 TYPES - BC-1.6 COMMON-NAME - flagellum // UNIQUE-ID - BC-1.6.13 TYPES - BC-1.6 COMMON-NAME - fimbri, pili // UNIQUE-ID - BC-1.6.15 TYPES - BC-1.6 COMMON-NAME - large molecule carriers // UNIQUE-ID - BC-1.6.2 TYPES - BC-1.6 COMMON-NAME - colanic acid (M antigen) // UNIQUE-ID - BC-1.6.3 TYPES - BC-1.6 COMMON-NAME - lipopolysaccharide // UNIQUE-ID - BC-1.6.4 TYPES - BC-1.6 COMMON-NAME - enterobacterial common antigen (surface glycolipid) // UNIQUE-ID - BC-1.6.5 TYPES - BC-1.6 COMMON-NAME - K antigen // UNIQUE-ID - BC-1.6.6 TYPES - BC-1.6 COMMON-NAME - osmoregulated periplasmic glucan // UNIQUE-ID - BC-1.6.7 TYPES - BC-1.6 COMMON-NAME - murein (peptidoglycan) // UNIQUE-ID - BC-1.6.9 TYPES - BC-1.6 COMMON-NAME - cytoplasmic polysaccharides // UNIQUE-ID - BC-1.7.1 TYPES - BC-1.7 COMMON-NAME - unassigned reversible reactions // UNIQUE-ID - BC-1.7.10 TYPES - BC-1.7 COMMON-NAME - sugar nucleotide biosynthesis, conversions // UNIQUE-ID - BC-1.7.12 TYPES - BC-1.7 COMMON-NAME - amino sugar conversions // UNIQUE-ID - BC-1.7.13 TYPES - BC-1.7 COMMON-NAME - amino acid conversion // UNIQUE-ID - BC-1.7.14 TYPES - BC-1.7 COMMON-NAME - polyamine biosynthesis // UNIQUE-ID - BC-1.7.15 TYPES - BC-1.7 COMMON-NAME - 2'-deoxyribonucleotide metabolism // UNIQUE-ID - BC-1.7.17 TYPES - BC-1.7 COMMON-NAME - formyl-THF biosynthesis // UNIQUE-ID - BC-1.7.18 TYPES - BC-1.7 COMMON-NAME - betaine biosynthesis // UNIQUE-ID - BC-1.7.19 TYPES - BC-1.7 COMMON-NAME - incorporation of metal ions // UNIQUE-ID - BC-1.7.2 TYPES - BC-1.7 COMMON-NAME - glyoxylate bypass // UNIQUE-ID - BC-1.7.20 TYPES - BC-1.7 COMMON-NAME - S-adenosyl methionine biosynthesis // UNIQUE-ID - BC-1.7.21 TYPES - BC-1.7 COMMON-NAME - glyoxylate degradation // UNIQUE-ID - BC-1.7.22 TYPES - BC-1.7 COMMON-NAME - carnitine metabolism // UNIQUE-ID - BC-1.7.23 TYPES - BC-1.7 COMMON-NAME - methylglyoxal metabolism // UNIQUE-ID - BC-1.7.24 TYPES - BC-1.7 COMMON-NAME - cyanate catabolism // UNIQUE-ID - BC-1.7.25 TYPES - BC-1.7 COMMON-NAME - glycolate metabolism // UNIQUE-ID - BC-1.7.26 TYPES - BC-1.7 COMMON-NAME - allantoin assimilation // UNIQUE-ID - BC-1.7.27 TYPES - BC-1.7 COMMON-NAME - pyridoxal 5'-phosphate salvage // UNIQUE-ID - BC-1.7.28 TYPES - BC-1.7 COMMON-NAME - pyruvate oxidation // UNIQUE-ID - BC-1.7.29 TYPES - BC-1.7 COMMON-NAME - acetate catabolism // UNIQUE-ID - BC-1.7.3 TYPES - BC-1.7 COMMON-NAME - non-oxidative branch, pentose pathway // UNIQUE-ID - BC-1.7.30 TYPES - BC-1.7 COMMON-NAME - threonine catabolism // UNIQUE-ID - BC-1.7.31 TYPES - BC-1.7 COMMON-NAME - aminobutyrate catabolism // UNIQUE-ID - BC-1.7.32 TYPES - BC-1.7 COMMON-NAME - putrescine catabolism // UNIQUE-ID - BC-1.7.33 TYPES - BC-1.7 COMMON-NAME - nucleotide and nucleoside conversions // UNIQUE-ID - BC-1.7.34 TYPES - BC-1.7 COMMON-NAME - murein turnover, recycling // UNIQUE-ID - BC-1.7.6 TYPES - BC-1.7 COMMON-NAME - misc. glycerol metabolism // UNIQUE-ID - BC-1.7.7 TYPES - BC-1.7 COMMON-NAME - galactose metabolism // UNIQUE-ID - BC-1.7.8 TYPES - BC-1.7 COMMON-NAME - gluconeogenesis // UNIQUE-ID - BC-1.7.9 TYPES - BC-1.7 COMMON-NAME - misc. glucose metabolism // UNIQUE-ID - BC-1.8.1 TYPES - BC-1.8 COMMON-NAME - phosphorous metabolism // UNIQUE-ID - BC-1.8.2 TYPES - BC-1.8 COMMON-NAME - sulfur metabolism // UNIQUE-ID - BC-1.8.3 TYPES - BC-1.8 COMMON-NAME - nitrogen metabolism // UNIQUE-ID - BC-2.1.1 TYPES - BC-2.1 COMMON-NAME - DNA replication // UNIQUE-ID - BC-2.1.2 TYPES - BC-2.1 COMMON-NAME - DNA restriction/modification // UNIQUE-ID - BC-2.1.3 TYPES - BC-2.1 COMMON-NAME - DNA recombination // UNIQUE-ID - BC-2.1.4 TYPES - BC-2.1 COMMON-NAME - DNA repair // UNIQUE-ID - BC-2.1.5 TYPES - BC-2.1 COMMON-NAME - DNA degradation // UNIQUE-ID - BC-2.2.2 TYPES - BC-2.2 COMMON-NAME - Transcription related // UNIQUE-ID - BC-2.2.3 TYPES - BC-2.2 COMMON-NAME - RNA modification // UNIQUE-ID - BC-2.2.4 TYPES - BC-2.2 COMMON-NAME - RNA degradation // UNIQUE-ID - BC-2.2.5 TYPES - BC-2.2 COMMON-NAME - tRNA // UNIQUE-ID - BC-2.2.6 TYPES - BC-2.2 COMMON-NAME - rRNA, stable RNA // UNIQUE-ID - BC-2.2.7 TYPES - BC-2.2 COMMON-NAME - antisense RNA // UNIQUE-ID - BC-2.3.1 TYPES - BC-2.3 COMMON-NAME - amino acid -activation // UNIQUE-ID - BC-2.3.2 TYPES - BC-2.3 COMMON-NAME - translation // UNIQUE-ID - BC-2.3.3 TYPES - BC-2.3 COMMON-NAME - posttranslational modification // UNIQUE-ID - BC-2.3.4 TYPES - BC-2.3 COMMON-NAME - chaperoning, repair (refolding) // UNIQUE-ID - BC-2.3.5 TYPES - BC-2.3 COMMON-NAME - export, signal peptide cleavage // UNIQUE-ID - BC-2.3.6 TYPES - BC-2.3 COMMON-NAME - turnover, degradation // UNIQUE-ID - BC-2.3.7 TYPES - BC-2.3 COMMON-NAME - nucleoproteins, basic proteins // UNIQUE-ID - BC-2.3.8 TYPES - BC-2.3 COMMON-NAME - ribosomal proteins // UNIQUE-ID - BC-2.3.9 TYPES - BC-2.3 COMMON-NAME - Non-ribosomal peptide synthetase // UNIQUE-ID - BC-3.1.1 TYPES - BC-3.1 COMMON-NAME - DNA structure level // UNIQUE-ID - BC-3.1.2 TYPES - BC-3.1 COMMON-NAME - transcriptional level // UNIQUE-ID - BC-3.1.3 TYPES - BC-3.1 COMMON-NAME - posttranscriptional // UNIQUE-ID - BC-3.1.4 TYPES - BC-3.1 COMMON-NAME - unknown // UNIQUE-ID - BC-3.3.1 TYPES - BC-3.3 COMMON-NAME - operon // UNIQUE-ID - BC-3.3.2 TYPES - BC-3.3 COMMON-NAME - regulon // UNIQUE-ID - BC-3.3.3 TYPES - BC-3.3 COMMON-NAME - stimulon // UNIQUE-ID - BC-3.3.4 TYPES - BC-3.3 COMMON-NAME - global // UNIQUE-ID - BC-4.1.A TYPES - BC-4.1 COMMON-NAME - alpha-type channels // UNIQUE-ID - BC-4.1.B TYPES - BC-4.1 COMMON-NAME - Beta barrel porins (The Outer Membrane Porin (OMP) Functional Superfamily) // UNIQUE-ID - BC-4.3.A TYPES - BC-4.1 COMMON-NAME - Pyrophosphate Bond (ATP; GTP; P2) Hydrolysis-driven Active Transporters // UNIQUE-ID - BC-4.2.A TYPES - BC-4.2 COMMON-NAME - Porters (Uni-, Sym- and Antiporters) // UNIQUE-ID - BC-4.2.C TYPES - BC-4.2 COMMON-NAME - Ion-gradient-driven energizers // UNIQUE-ID - BC-4.3.D TYPES - BC-4.3 COMMON-NAME - Oxidoreduction-driven Active Transporters // UNIQUE-ID - BC-4.4.A TYPES - BC-4.4 COMMON-NAME - Phosphotransferase Systems (PEP-dependent PTS) // UNIQUE-ID - BC-5.5.1 TYPES - BC-5.5 COMMON-NAME - osmotic pressure // UNIQUE-ID - BC-5.5.2 TYPES - BC-5.5 COMMON-NAME - temperature extremes // UNIQUE-ID - BC-5.5.3 TYPES - BC-5.5 COMMON-NAME - starvation // UNIQUE-ID - BC-5.5.4 TYPES - BC-5.5 COMMON-NAME - pH // UNIQUE-ID - BC-5.5.5 TYPES - BC-5.5 COMMON-NAME - dessication // UNIQUE-ID - BC-5.5.6 TYPES - BC-5.5 COMMON-NAME - other (mechanical, nutritional, oxidative stress) // UNIQUE-ID - BC-5.5.7 TYPES - BC-5.5 COMMON-NAME - Fe aquisition // UNIQUE-ID - BC-5.6.1 TYPES - BC-5.6 COMMON-NAME - radiation // UNIQUE-ID - BC-5.6.2 TYPES - BC-5.6 COMMON-NAME - detoxification // UNIQUE-ID - BC-5.6.3 TYPES - BC-5.6 COMMON-NAME - cell killing // UNIQUE-ID - BC-5.6.4 TYPES - BC-5.6 COMMON-NAME - drug resistance/sensitivity // UNIQUE-ID - 2-HEXADECENOATES TYPES - Long-Chain-Fatty-Acids COMMON-NAME - a 2-hexadecenoate SYNONYMS - 16:1Δ2 SYNONYMS - 2-hexadecenoic acid // UNIQUE-ID - Alpha-linolenoyl-groups TYPES - Long-Chain-Fatty-Acids COMMON-NAME - a lipid α-linolenoyl group COMMENT - This class describes an α-linolenate group that is incorporated within a lipid molecule // UNIQUE-ID - Gamma-linolenoyl-groups TYPES - Long-Chain-Fatty-Acids COMMON-NAME - a lipid γ-linolenoyl group COMMENT - This class describes a γ-linolenoate group that is incorporated within a lipid molecule // UNIQUE-ID - CPD0-2208 TYPES - Medium-chain-fatty-acids COMMON-NAME - a tetradecenoate(n-C14:1) SYNONYMS - tetradecenoic acid(n-C14:1) // UNIQUE-ID - 2R-hydroxy-carboxylates TYPES - 2-Hydroxy-carboxylates COMMON-NAME - a (2R)-hydroxy-carboxylate // UNIQUE-ID - Lactate TYPES - 2-Hydroxy-carboxylates COMMON-NAME - lactate COMMENT - Lactate, or 2-hydroxypropanoate, was discovered in 1780 by a Swedish chemist, Scheele, /who isolated it from sour milk. It is the simplest hydroxycarboxylic acid and exists as 2 stereoisomers. /Lactate has a pK of 3.86 and dissociates freely at physiological pH, yielding a lactate ion:lactic acid ratio /of 3000:1|CITS: [15987839]|. SYNONYMS - lactic acid SYNONYMS - DL lactate SYNONYMS - (RS)-lactate SYNONYMS - DL lactic acid SYNONYMS - (RS)-lactic acid // UNIQUE-ID - Myo-inositol-bisphosphates TYPES - Myo-inositol-polyphosphates COMMON-NAME - a myo-inositol bisphosphate // UNIQUE-ID - Myo-inositol-penta-kis-phosphates TYPES - Myo-inositol-polyphosphates COMMON-NAME - a myo-inositol pentakisphosphate SYNONYMS - myo-inositol pentakisphosphate (mixed isomers) // UNIQUE-ID - Myo-inositol-tetra-kis-phosphates TYPES - Myo-inositol-polyphosphates COMMON-NAME - a myo-inositol tetrakisphosphate // UNIQUE-ID - Myo-inositol-trisphosphates TYPES - Myo-inositol-polyphosphates COMMON-NAME - a myo-inositol trisphosphate // UNIQUE-ID - Pyrophosphate-inositol-phosphates TYPES - Myo-inositol-polyphosphates COMMON-NAME - a pyrophosphate-containing inositol phosphate SYNONYMS - a diphospho-myo-inositol pentakisphosphate SYNONYMS - a diphospho-myo-inositol polyphosphate // UNIQUE-ID - 1-PHOSPHATIDYL-1D-MYO-INOSITOL-35-BISPH TYPES - Phosphoinositides COMMON-NAME - 1-phosphatidyl-1D-myo-inositol 3,5-bisphosphate COMMENT - The phosphorylated derivatives of |FRAME: L-1-phosphatidyl-inositols "phosphatidylinositol"| (PtdIns), collectively called phosphoinositides (PIs), are eukaryotic cell membrane phospholipids whose inositol head group is phosphorylated at position D3, D4, or D5, singly or in all combinations, to yield seven PI metabolites. / / /The seven phosphoinositides found in animals include: / /Phosphatidylinositol monophosphates: |FRAME: CPD-177|, |FRAME: CPD-1108| and |FRAME: 1-PHOSPHATIDYL-1D-MYO-INOSITOL-5-PHOSPHA|. / /Phosphatidylinositol bisphophosphates: |FRAME: 1-PHOSPHATIDYL-1D-MYO-INOSITOL-34-BISPH|, |FRAME: 1-PHOSPHATIDYL-1D-MYO-INOSITOL-35-BISPH|, and |FRAME: PHOSPHATIDYL-MYO-INOSITOL-45-BISPHOSPHA|. / /Phosphatidylinositol trisphophosphate: |FRAME: PHOSPHATIDYLINOSITOL-345-TRIPHOSPHATE|. / / /|FRAME: 1-PHOSPHATIDYL-1D-MYO-INOSITOL-35-BISPH "Phosphatidylinositol-3,5 bisphosphosphate"| is vital in the differentiation and development of multicellular organisms. /In mammals, this compound is synthesized from |FRAME: CPD-177| only by the very large enzyme, |FRAME: ENSG00000115020-MONOMER|. A knockout of this enzyme or its associated regulator |FRAME: ENSG00000103043-MONOMER| is lethal |CITS: [17956977]|. // UNIQUE-ID - PHOSPHATIDYLINOSITOL-345-TRIPHOSPHATE TYPES - Phosphoinositides COMMON-NAME - 1-phosphatidyl-1D-myo-inositol 3,4,5-trisphosphate COMMENT - The phosphorylated derivatives of |FRAME: L-1-phosphatidyl-inositols "phosphatidylinositol"| (PtdIns), collectively called phosphoinositides (PIs), are eukaryotic cell membrane phospholipids whose inositol head group is phosphorylated at position D3, D4, or D5, singly or in all combinations, to yield seven PI metabolites. / / /The seven phosphoinositides found in animals include: / /Phosphatidylinositol monophosphates: |FRAME: CPD-177|, |FRAME: CPD-1108| and |FRAME: 1-PHOSPHATIDYL-1D-MYO-INOSITOL-5-PHOSPHA|. / /Phosphatidylinositol bisphophosphates: |FRAME: 1-PHOSPHATIDYL-1D-MYO-INOSITOL-34-BISPH|, |FRAME: 1-PHOSPHATIDYL-1D-MYO-INOSITOL-35-BISPH|, and |FRAME: PHOSPHATIDYL-MYO-INOSITOL-45-BISPHOSPHA|. / /Phosphatidylinositol trisphophosphate: |FRAME: PHOSPHATIDYLINOSITOL-345-TRIPHOSPHATE|. SYNONYMS - 1-phosphatidyl-1D-myo-inositol 3,4,5-triphosphate SYNONYMS - phosphatidyl inositol-3,4,5-trisphosphate SYNONYMS - phosphatidylinositol-3,4,5-triphosphate // UNIQUE-ID - Analogs-of-Meso-Diaminopimaleates TYPES - Lysine-or-DAP COMMON-NAME - an analog of meso-Diaminopimaleate // UNIQUE-ID - S-Alkyl-L-Cysteines TYPES - S-Substituted-L-Cysteines COMMON-NAME - an S-alkyl-L-cysteine // UNIQUE-ID - Alpha-Hexose-1-Phosphates TYPES - Hexose-1-Phosphate COMMON-NAME - an α-hexose-1-phosphate // UNIQUE-ID - D-glucose-1-phosphates TYPES - Hexose-1-Phosphate COMMON-NAME - a D-glucose-1-phosphate // UNIQUE-ID - 6-Phospho-b-D-galactosides TYPES - HEXOSE-6-PHOSPHATES COMMON-NAME - a 6-phospho-β-D-galactoside // UNIQUE-ID - D-glucose-6-phosphate TYPES - HEXOSE-6-PHOSPHATES COMMON-NAME - D-glucose-6-phosphate SYNONYMS - D-glucose-6-P SYNONYMS - D-glucose-6-phosphate // UNIQUE-ID - Ribulose-phosphates TYPES - PENTOSE-5-PHOSPHATES COMMON-NAME - L(or D)-ribulose 5-phosphate // UNIQUE-ID - Alpha-D-aldose-1-phosphates TYPES - D-Aldose-1-phosphates COMMON-NAME - an α-D-aldose-1-phosphate SYNONYMS - α-D-aldose 1-phosphate // UNIQUE-ID - ADP-Aldoses TYPES - Aldoses COMMON-NAME - an ADP-aldose // UNIQUE-ID - Aldohexoses TYPES - Aldoses COMMON-NAME - an aldohexose // UNIQUE-ID - Aldopentoses TYPES - Aldoses COMMON-NAME - an aldopentose // UNIQUE-ID - D-Aldoses TYPES - Aldoses COMMON-NAME - a D-aldose COMMENT - An aldose is a monosaccharide containing one aldehyde group per molecule and having a chemical /formula of the form CnH2n-1On where /n>=3. / /R in this structure drawing stands for /CnH2nOn where n>=2. // UNIQUE-ID - Hexosamines TYPES - Amino-Sugars COMMON-NAME - a hexosamine // UNIQUE-ID - D-Heptoses TYPES - Heptoses COMMON-NAME - a D-heptose // UNIQUE-ID - L-Heptoses TYPES - Heptoses COMMON-NAME - an L-heptose // UNIQUE-ID - D-Hexoses TYPES - Hexoses COMMON-NAME - a D-hexose // UNIQUE-ID - Fructose TYPES - Hexoses // UNIQUE-ID - L-Hexoses TYPES - Hexoses COMMON-NAME - an L-hexose // UNIQUE-ID - Pyranoses TYPES - Hexoses COMMON-NAME - a pyranose // UNIQUE-ID - SORBOSE TYPES - Hexoses COMMON-NAME - a sorbose // UNIQUE-ID - Arabinoses TYPES - Pentoses COMMON-NAME - Arabinose // UNIQUE-ID - D-Pentoses TYPES - Pentoses COMMON-NAME - a D-pentose // UNIQUE-ID - L-Pentoses TYPES - Pentoses COMMON-NAME - an L-pentose // UNIQUE-ID - Ribuloses TYPES - Pentoses COMMON-NAME - L(or D)-ribulose // UNIQUE-ID - D-Tetroses TYPES - Tetroses COMMON-NAME - a D-tetrose // UNIQUE-ID - L-Tetroses TYPES - Tetroses COMMON-NAME - an L-tetrose // UNIQUE-ID - Lipid-linked-16-mannosyl-mannose-oligos TYPES - 16-a-D-Man-16-a-D-Man-Oligosac COMMON-NAME - a lipid-linked α(1->6)-D-mannosyl-D-mannose-oligosaccharide // UNIQUE-ID - Lipid-linked-mannosyl-oligos TYPES - 16-alpha-D-Mannosyloligosaccharides COMMON-NAME - a lipid-linked oligosaccharide // UNIQUE-ID - GLYCOPROTEIN-ETCETERA-GALACTOSE TYPES - Disaccharides COMMON-NAME - a glycoprotein-α-L-fucosyl-(1,2)-D-galactose SYNONYMS - α-L-fucosyl-(1->2)-D-galactosyl-R // UNIQUE-ID - MDO-6-Glycerophospho-D-Glucoses TYPES - Osmoregulated-Periplasmic-Glucans COMMON-NAME - an MDO-6-(glycerophospho)-D-glucose COMMENT - Membrane Derived Oligosaccharides (MDOs) represent a class of periplasmatic oligosaccharides occuring in /Gram-negative bacteria. The detailed structures are still under investigation, /and cyclic, branched, and open-chain variants have been found, usually containing on the order of a dozen /D-glucose units in β-D-glucosidic linkages. /They are decorated to varying degrees with phospho-sn-glycerol, phosphoethanolamine, /phosphocholine, succinate, and methylmalonic residues that impart negative charges. MDOs are implicated in /osmoregulation. // UNIQUE-ID - MDO-D-Glucoses TYPES - Osmoregulated-Periplasmic-Glucans COMMON-NAME - an MDO-O-glucose COMMENT - Membrane Derived Oligosaccharides (MDOs) represent a class of periplasmatic oligosaccharides occuring in /Gram-negative bacteria. The detailed structures are still under investigation, /and cyclic, branched, and open-chain variants have been found, usually containing on the order of a dozen /D-glucose units in β-D-glucosidic linkages. /They are decorated to varying degrees with phospho-sn-glycerol, phosphoethanolamine, /phosphocholine, succinate, and methylmalonic residues that impart negative charges. MDOs are implicated in /osmoregulation. // UNIQUE-ID - iota-Carrageenans TYPES - Carrageenans COMMON-NAME - an ι carrageenan // UNIQUE-ID - Lambda-Carrageenan TYPES - Carrageenans COMMON-NAME - λ-carrageenan SYNONYMS - λ- carrageenan // UNIQUE-ID - 1-6-alpha-D-glucan TYPES - Dextrins COMMON-NAME - a 1-6-α-D-glucan // UNIQUE-ID - CPD-1790 TYPES - Dextrins COMMON-NAME - a maltodextrin COMMENT - Maltodextrins are linear polymers of glucose molecules joined by an O-glycosidic /(α-1->4) bond. /Maltodextrins are formed from the partial hydrolysis of starch and glycogen. It is a mixture of glucose, /maltose (two glucose units), oligosaccharides, and polysaccharides. SYNONYMS - 4-{(1,4)-α-D-glucosyl}(n-1)-D-glucose SYNONYMS - maltodextrins SYNONYMS - maltodextrin(n) SYNONYMS - maltodextrin(n-2) SYNONYMS - n+2 maltodextrin SYNONYMS - linear maltodextrin // UNIQUE-ID - CPD0-971 TYPES - Dextrins COMMON-NAME - a limit dextrin COMMENT - |FRAME: CPD0-971| is the name given to the highly-branched core of the polysaccharide fragments /remaining at the end (limit) of exhaustive hydrolysis of amylopectin or glycogen by α-1,4-glucan /hydrolase enzymes such as |FRAME: GLYCOPHOSPHORYL-CPLX| and /|FRAME: MALDEXPHOSPHORYL-CPLX|. /These enzymes shorten the chains, but are not able to hydrolyze the α-1,6 bonds at branch points. SYNONYMS - a glycogen phosphorylase-limit dextrin SYNONYMS - a glycogen phosphorylase-limited dextrin // UNIQUE-ID - DEXTRAN TYPES - Dextrins COMMON-NAME - a dextran COMMENT - Dextran is a complex branched polysaccharide made of many glucose molecules joined into chains /of varying lengths. /The straight chain consists of α1->6 glycosidic linkages between glucose molecules, /while branches begin from α1->3 linkages (and in some cases, α1->2 and /α1->4 linkages as well). SYNONYMS - DEAE-dextran SYNONYMS - dextran T 500- SYNONYMS - dextran T 40- SYNONYMS - dextran B 1355-S SYNONYMS - dextran B 1355- SYNONYMS - saviosol SYNONYMS - rondex SYNONYMS - rheopolyglucin SYNONYMS - rheomacrodex SYNONYMS - rheoisodex SYNONYMS - rheodextran SYNONYMS - promit SYNONYMS - polyglucin SYNONYMS - macrodex SYNONYMS - infukoll SYNONYMS - hyskon SYNONYMS - hemodex SYNONYMS - dextran 80- SYNONYMS - dextran 75- SYNONYMS - dextran 70- SYNONYMS - dextran 40000- SYNONYMS - dextran 40- SYNONYMS - dextran T-500- SYNONYMS - dextran T-40- SYNONYMS - dextran T 70- SYNONYMS - dextran M 70- SYNONYMS - dextran b512 SYNONYMS - dextran b1355 SYNONYMS - dextran B-1355- SYNONYMS - dextran B-1355-S // UNIQUE-ID - Truncated-Limit-Dextrins TYPES - Dextrins COMMON-NAME - a limit dextrin with short branches COMMENT - |FRAME: Truncated-Limit-Dextrins| is formed when |FRAME: CPD0-971| is subjected to the /|FRAME:ENZRXN-14616| activity of the |FRAME: MONOMER-13683|. The enzyme shortens the branching /chains, leaving only a single glucose residue connected by an α-1,6 bond to the main glucan /chain. // UNIQUE-ID - Graminans TYPES - Fructans COMMON-NAME - a graminan // UNIQUE-ID - Inulin TYPES - Fructans COMMON-NAME - an inulin COMMENT - Inulins are polymers mainly comprising fructose units and typically have a terminal glucose. /The fructose units in inulins are joined by a β-(2-1) glycosidic bond. /Plant inulins generally contain between 20 to several thousand fructose units. SYNONYMS - a 1F-β-D-fructosylsucrose SYNONYMS - a 2-[2-[[3,4-dihydroxy-2,5-bis(hydroxymethyl)tetrahydrofuran-2-yl] oxymethyl]-3,4-dihydroxy-5-(hydroxymethyl)tetrahydrofuran-2-yl] oxy-6-(hydroxymethyl)tetrahydropyran-3,4,5-triol SYNONYMS - a β-D-fructofuranosyl-(2->1)-β-D-fructofuranosyl α-D-glucopyranoside SYNONYMS - a (2,1-β-D-fructan) // UNIQUE-ID - Levan TYPES - Fructans COMMON-NAME - a levan COMMENT - Levan is a homopolysaccharide which is composed of D-fructofuranosyl residues joined by a 2,6 bond, /with multiple branches attached by 2,1 linkages. / // UNIQUE-ID - Levanns TYPES - Fructans COMMON-NAME - a 2,6-β-D-fructan // UNIQUE-ID - 1-3-alpha-D-Glucans TYPES - Glycogens COMMON-NAME - a 1,3-α-D-glucan SYNONYMS - 1,3-α-D-glucan SYNONYMS - (1,3-α-D-glucosyl)(n) SYNONYMS - (1,3-α-D-glucosyl)(n+1) SYNONYMS - (1,3-α-D-glucosyl)(n-1) // UNIQUE-ID - 1-4-alpha-D-Glucan TYPES - Glycogens COMMON-NAME - a 1,4-α-D-glucan SYNONYMS - 1,4-α-D-glucan SYNONYMS - amylose SYNONYMS - β-amylase SYNONYMS - (1,4-α-D-glucosyl)(n) SYNONYMS - (1,4-α-D-glucosyl)(n+1) SYNONYMS - (1,4-α-D-glucosyl)(n-1) // UNIQUE-ID - 6-alpha-D--1-4-alpha-D-Glucano--Glucan TYPES - Glycogens COMMON-NAME - glycogen COMMENT - Glycogen is a glucose-containing polysaccharide, comprised of approximately 95% /α-1,4 linkages and the remainder α-1,6 branch glucosyl linkages, which occur approximately /every 12 glucose residues. /The average chain length is about 12 to 14 glucose units. SYNONYMS - 6-α-D-(1,4-α-D-glucano)-glucan // UNIQUE-ID - Beta-D-Glucans TYPES - Glycogens COMMON-NAME - a β-D glucan // UNIQUE-ID - Cyclodextrins TYPES - Glycogens COMMON-NAME - a cyclodextrin SYNONYMS - cyclomaltodextrins SYNONYMS - cyclodextrins // UNIQUE-ID - Cycloisomaltooligosaccharides TYPES - Glycogens COMMON-NAME - a cycloisomaltooligosaccharide // UNIQUE-ID - POLY-GLUCOSYLATED-GLYCOGENINS TYPES - Glycogens COMMON-NAME - a glucosylated glycogenin COMMENT - This class includes the precursors of glycogen that are substrates for the enzyme /|FRAME: CPLX-6975|. It includes poly-glycosylated glycogenin (including |FRAME: CPD-7010|, also /known as the glycogen primer), but not |FRAME: GLUCOSYL-GLYCOGENIN|, which can not serve /as a primer for |FRAME: CPLX-6975|. SYNONYMS - (1,4-α-D-glucosyl)(n) glycogenin SYNONYMS - (1,4-α-D-glucosyl)(n+1) glycogenin SYNONYMS - (1,4-α-D-glucosyl)(n-1) glycogenin // UNIQUE-ID - 14-BETA-D-XYLANS TYPES - Hemicelluloses COMMON-NAME - a (1->4)-β-D-xylan // UNIQUE-ID - Xyloglucans-Galactose TYPES - Hemicelluloses COMMON-NAME - a xylose/galactose xyloglucan // UNIQUE-ID - Xyloglucans-Xylose TYPES - Hemicelluloses COMMON-NAME - a xylose-only xyloglucan COMMENT - Xyloglucan (XyG) is a major hemicellulose in the primary walls of many land plants. It has a /β-1,4-glucan backbone that is substituted with xylosyl residues and other sugars that vary amoung /the plant species. A common terminology refers to a glucosyl unit as G and a glucose residues /substituted by D-xylose in a (1,6)-α-linkage as X. /Using this terminology, most XyGs consist of repeating heptasaccharide XXXG units. /Subsequently (1,2)-β-D-galactosyl residues are added at the second and/or third xylose residue /and (1,2)-α-L-fucose at galactosyl unit of the third xylose residue |CITS: [17011813][12837954]|. / // UNIQUE-ID - 2-Alpha-Mannosyl-Heteroglycans TYPES - Heteroglycans COMMON-NAME - 2-(α-D-mannosyl)-heteroglycan // UNIQUE-ID - 3-Alpha-Mannosyl-Heteroglycans TYPES - Heteroglycans COMMON-NAME - 3-(alpha-D-mannosyl)-heteroglycan // UNIQUE-ID - 1-4-alpha-D-galacturonosyl TYPES - Pectin COMMON-NAME - a homogalacturonan COMMENT - |FRAME: 1-4-alpha-D-galacturonosyl "Homogalacturonan"| is a polysaccharide consisting of α-1,4-linked |FRAME: D-GALACTURONATE| units. /It is found in a highly methyl-esterified form when exported into cell walls. / /|FRAME: 1-4-alpha-D-galacturonosyl "Homogalacturonan"| forms one type of the backbones found in |FRAME: Pectin "pectin"|. SYNONYMS - a 1,4-α-poly-D-galacturonate SYNONYMS - a 1,4-α-D-galacturonosyl // UNIQUE-ID - Methylesterified-homogalacturonan TYPES - Pectin COMMON-NAME - methylesterified 1,4-α-D-galacturonosyl SYNONYMS - methylesterified homogalacturonan // UNIQUE-ID - Xylogalacturonan TYPES - Pectin COMMON-NAME - a xylogalacturonan COMMENT - |FRAME: Xylogalacturonan "Xylogalacturonan"| is a substituted |FRAME: 1-4-alpha-D-galacturonosyl "homogalacturonan"| in which the α-1,4-linked |FRAME: D-GALACTURONATE| backbone is substituted at position O-3 with a β linked |FRAME: XYLOSE|. Occasionally the xylose is further substituted at position O-4 with an additional β linked xylose. / /The homogalacturonan backbone is partially methylesterified at the C-6 carboxyl, and may be O-acetylated at positions O-2 or O-3. / /|FRAME: Xylogalacturonan "Xylogalacturonan"| has been reported to be abundant in the reproductive tissues of many plants. Recently it was reported to be present in vegetative tissues of Arabidopsis |CITS: [17336350]|. // UNIQUE-ID - Alpha-Amyloses TYPES - Starch COMMON-NAME - an α-amylose COMMENT - |FRAME: Starch| is a combination of two polymeric carbohydrates (polysaccharides) called |FRAME: Alpha-Amyloses| /and |FRAME: CPD-7043|. /|FRAME: Alpha-Amyloses| contains up to several thousand α-glucosyl units linked almost exclusively in /linear α(1->4) linkages, with very few branches of α(1->6) linkages. In |FRAME: CPD-7043|, /on the other hand, branching is common, and occurs approximately every 24-30 glucose monomer units. /|FRAME: Alpha-Amyloses| accounts for 30% of starch, while |FRAME: CPD-7043| accounts for the other 70%. // UNIQUE-ID - Xyloglucan-Xylosyl-Residue TYPES - Xyloglucans COMMON-NAME - xyloglucan with an α-D-xylosyl sidechain // UNIQUE-ID - Monogalactosyldiacylglycerols-34-1 TYPES - D-Galactosyl-12-diacyl-glycerols COMMON-NAME - monogalactosyldiacylglycerol-34:1 COMMENT - In this group of monogalactosyldiacylglycerols, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 34, and the total number of double bonds in the two acyl groups adds up to 1. SYNONYMS - MGDG-34:1 SYNONYMS - MGDG34:1 // UNIQUE-ID - Monogalactosyldiacylglycerols-34-2 TYPES - D-Galactosyl-12-diacyl-glycerols COMMON-NAME - monogalactosyldiacylglycerol-34:2 COMMENT - In this group of monogalactosyldiacylglycerols, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 34, and the total number of double bonds in the two acyl groups adds up to 2. SYNONYMS - MGDG-34:2 SYNONYMS - MGDG34:2 // UNIQUE-ID - Monogalactosyldiacylglycerols-34-3 TYPES - D-Galactosyl-12-diacyl-glycerols COMMON-NAME - monogalactosyldiacylglycerol-34:3 COMMENT - In this group of monogalactosyldiacylglycerols, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 34, and the total number of double bonds in the two acyl groups adds up to 3. SYNONYMS - MGDG-34:3 SYNONYMS - MGDG34:3 // UNIQUE-ID - Monogalactosyldiacylglycerols-34-4 TYPES - D-Galactosyl-12-diacyl-glycerols COMMON-NAME - monogalactosyldiacylglycerol-34:4 COMMENT - In this group of monogalactosyldiacylglycerols, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 34, and the total number of double bonds in the two acyl groups adds up to 4. SYNONYMS - MGDG-34:4 SYNONYMS - MGDG34:4 // UNIQUE-ID - Monogalactosyldiacylglycerols-34-5 TYPES - D-Galactosyl-12-diacyl-glycerols COMMON-NAME - monogalactosyldiacylglycerol-34:5 COMMENT - In this group of monogalactosyldiacylglycerols, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 34, and the total number of double bonds in the two acyl groups adds up to 5. SYNONYMS - MGDG-34:5 SYNONYMS - MGDG34:5 // UNIQUE-ID - Monogalactosyldiacylglycerols-34-6 TYPES - D-Galactosyl-12-diacyl-glycerols COMMON-NAME - monogalactosyldiacylglycerol-34:6 COMMENT - In this group of monogalactosyldiacylglycerols, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 34, and the total number of double bonds in the two acyl groups adds up to 6. SYNONYMS - MGDG-34:6 SYNONYMS - MGDG34:6 // UNIQUE-ID - Monogalactosyldiacylglycerols-36-1 TYPES - D-Galactosyl-12-diacyl-glycerols COMMON-NAME - monogalactosyldiacylglycerol-36:1 COMMENT - In this group of monogalactosyldiacylglycerols, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 36, and the total number of double bonds in the two acyl groups adds up to 1. SYNONYMS - MGDG-36:1 SYNONYMS - MGDG36:1 // UNIQUE-ID - Monogalactosyldiacylglycerols-36-2 TYPES - D-Galactosyl-12-diacyl-glycerols COMMON-NAME - monogalactosyldiacylglycerol-36:2 COMMENT - In this group of monogalactosyldiacylglycerols, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 36, and the total number of double bonds in the two acyl groups adds up to 2. SYNONYMS - MGDG-36:2 SYNONYMS - MGDG36:2 // UNIQUE-ID - Monogalactosyldiacylglycerols-36-3 TYPES - D-Galactosyl-12-diacyl-glycerols COMMON-NAME - monogalactosyldiacylglycerol-36:3 COMMENT - In this group of monogalactosyldiacylglycerols, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 36, and the total number of double bonds in the two acyl groups adds up to 3. SYNONYMS - MGDG-36:3 SYNONYMS - MGDG36:3 // UNIQUE-ID - Monogalactosyldiacylglycerols-36-4 TYPES - D-Galactosyl-12-diacyl-glycerols COMMON-NAME - monogalactosyldiacylglycerol-36:4 COMMENT - In this group of monogalactosyldiacylglycerols, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 36, and the total number of double bonds in the two acyl groups adds up to 4. SYNONYMS - MGDG-36:4 SYNONYMS - MGDG36:4 // UNIQUE-ID - Monogalactosyldiacylglycerols-36-5 TYPES - D-Galactosyl-12-diacyl-glycerols COMMON-NAME - monogalactosyldiacylglycerol-36:5 COMMENT - In this group of monogalactosyldiacylglycerols, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 36, and the total number of double bonds in the two acyl groups adds up to 5. SYNONYMS - MGDG-36:5 SYNONYMS - MGDG36:5 // UNIQUE-ID - Monogalactosyldiacylglycerols-36-6 TYPES - D-Galactosyl-12-diacyl-glycerols COMMON-NAME - monogalactosyldiacylglycerol-36:6 COMMENT - In this group of monogalactosyldiacylglycerols, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 36, and the total number of double bonds in the two acyl groups adds up to 6. SYNONYMS - MGDG-36:6 SYNONYMS - MGDG36:6 // UNIQUE-ID - Monogalactosyldiacylglycerols-38-3 TYPES - D-Galactosyl-12-diacyl-glycerols COMMON-NAME - monogalactosyldiacylglycerol-38:3 COMMENT - In this group of monogalactosyldiacylglycerols, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 38, and the total number of double bonds in the two acyl groups adds up to 3. SYNONYMS - MGDG-38:3 SYNONYMS - MGDG38:3 // UNIQUE-ID - Monogalactosyldiacylglycerols-38-4 TYPES - D-Galactosyl-12-diacyl-glycerols COMMON-NAME - monogalactosyldiacylglycerol-38:4 COMMENT - In this group of monogalactosyldiacylglycerols, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 38, and the total number of double bonds in the two acyl groups adds up to 4. SYNONYMS - MGDG-38:4 SYNONYMS - MGDG38:4 // UNIQUE-ID - Monogalactosyldiacylglycerols-38-5 TYPES - D-Galactosyl-12-diacyl-glycerols COMMON-NAME - monogalactosyldiacylglycerol-38:5 COMMENT - In this group of monogalactosyldiacylglycerols, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 38, and the total number of double bonds in the two acyl groups adds up to 5. SYNONYMS - MGDG-38:5 SYNONYMS - MGDG38:5 // UNIQUE-ID - Monogalactosyldiacylglycerols-38-6 TYPES - D-Galactosyl-12-diacyl-glycerols COMMON-NAME - monogalactosyldiacylglycerol-38:6 COMMENT - In this group of monogalactosyldiacylglycerols, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 38, and the total number of double bonds in the two acyl groups adds up to 6. SYNONYMS - MGDG-38:6 SYNONYMS - MGDG38:6 // UNIQUE-ID - Digalactosyldiacylglycerols-34-1 TYPES - Galactosyl-galactosyl-diacyl-glycerols COMMON-NAME - digalactosyldiacylglycerol-34:1 COMMENT - In this group of digalactosyldiacylglycerols, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 34, and the total number of double bonds in the two acyl groups adds up to 1. SYNONYMS - DGDG-34:1 SYNONYMS - DGDG34:1 // UNIQUE-ID - Digalactosyldiacylglycerols-34-2 TYPES - Galactosyl-galactosyl-diacyl-glycerols COMMON-NAME - digalactosyldiacylglycerol-34:2 COMMENT - In this group of digalactosyldiacylglycerols, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 34, and the total number of double bonds in the two acyl groups adds up to 2. SYNONYMS - DGDG-34:2 SYNONYMS - DGDG34:2 // UNIQUE-ID - Digalactosyldiacylglycerols-34-3 TYPES - Galactosyl-galactosyl-diacyl-glycerols COMMON-NAME - digalactosyldiacylglycerol-34:3 COMMENT - In this group of digalactosyldiacylglycerols, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 34, and the total number of double bonds in the two acyl groups adds up to 3. SYNONYMS - DGDG-34:3 SYNONYMS - DGDG34:3 // UNIQUE-ID - Digalactosyldiacylglycerols-34-4 TYPES - Galactosyl-galactosyl-diacyl-glycerols COMMON-NAME - digalactosyldiacylglycerol-34:4 COMMENT - In this group of digalactosyldiacylglycerols, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 34, and the total number of double bonds in the two acyl groups adds up to 4. SYNONYMS - DGDG-34:4 SYNONYMS - DGDG34:4 // UNIQUE-ID - Digalactosyldiacylglycerols-34-5 TYPES - Galactosyl-galactosyl-diacyl-glycerols COMMON-NAME - digalactosyldiacylglycerol-34:5 COMMENT - In this group of digalactosyldiacylglycerols, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 34, and the total number of double bonds in the two acyl groups adds up to 5. SYNONYMS - DGDG-34:5 SYNONYMS - DGDG34:5 // UNIQUE-ID - Digalactosyldiacylglycerols-34-6 TYPES - Galactosyl-galactosyl-diacyl-glycerols COMMON-NAME - digalactosyldiacylglycerol-34:6 COMMENT - In this group of digalactosyldiacylglycerols, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 34, and the total number of double bonds in the two acyl groups adds up to 6. SYNONYMS - DGDG-34:6 SYNONYMS - DGDG34:6 // UNIQUE-ID - Digalactosyldiacylglycerols-36-1 TYPES - Galactosyl-galactosyl-diacyl-glycerols COMMON-NAME - digalactosyldiacylglycerol-36:1 COMMENT - In this group of digalactosyldiacylglycerols, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 36, and the total number of double bonds in the two acyl groups adds up to 1. SYNONYMS - DGDG-36:1 SYNONYMS - DGDG36:1 // UNIQUE-ID - Digalactosyldiacylglycerols-36-2 TYPES - Galactosyl-galactosyl-diacyl-glycerols COMMON-NAME - digalactosyldiacylglycerol-36:2 COMMENT - In this group of digalactosyldiacylglycerols, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 36, and the total number of double bonds in the two acyl groups adds up to 2. SYNONYMS - DGDG-36:2 SYNONYMS - DGDG36:2 // UNIQUE-ID - Digalactosyldiacylglycerols-36-3 TYPES - Galactosyl-galactosyl-diacyl-glycerols COMMON-NAME - digalactosyldiacylglycerol-36:3 COMMENT - In this group of digalactosyldiacylglycerols, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 36, and the total number of double bonds in the two acyl groups adds up to 3. SYNONYMS - DGDG-36:3 SYNONYMS - DGDG36:3 // UNIQUE-ID - Digalactosyldiacylglycerols-36-4 TYPES - Galactosyl-galactosyl-diacyl-glycerols COMMON-NAME - digalactosyldiacylglycerol-36:4 COMMENT - In this group of digalactosyldiacylglycerols, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 36, and the total number of double bonds in the two acyl groups adds up to 4. SYNONYMS - DGDG-36:4 SYNONYMS - DGDG36:4 // UNIQUE-ID - Digalactosyldiacylglycerols-36-5 TYPES - Galactosyl-galactosyl-diacyl-glycerols COMMON-NAME - digalactosyldiacylglycerol-36:5 COMMENT - In this group of digalactosyldiacylglycerols, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 36, and the total number of double bonds in the two acyl groups adds up to 5. SYNONYMS - DGDG-36:5 SYNONYMS - DGDG36:5 // UNIQUE-ID - Digalactosyldiacylglycerols-36-6 TYPES - Galactosyl-galactosyl-diacyl-glycerols COMMON-NAME - digalactosyldiacylglycerol-36:6 COMMENT - In this group of digalactosyldiacylglycerols, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 36, and the total number of double bonds in the two acyl groups adds up to 6. SYNONYMS - DGDG-36:6 SYNONYMS - DGDG36:6 // UNIQUE-ID - Digalactosyldiacylglycerols-38-3 TYPES - Galactosyl-galactosyl-diacyl-glycerols COMMON-NAME - digalactosyldiacylglycerol-38:3 COMMENT - In this group of digalactosyldiacylglycerols, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 38, and the total number of double bonds in the two acyl groups adds up to 3. SYNONYMS - DGDG-38:3 SYNONYMS - DGDG38:3 // UNIQUE-ID - Digalactosyldiacylglycerols-38-4 TYPES - Galactosyl-galactosyl-diacyl-glycerols COMMON-NAME - digalactosyldiacylglycerol-38:4 COMMENT - In this group of digalactosyldiacylglycerols, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 38, and the total number of double bonds in the two acyl groups adds up to 4. SYNONYMS - DGDG-38:4 SYNONYMS - DGDG38:4 // UNIQUE-ID - Digalactosyldiacylglycerols-38-5 TYPES - Galactosyl-galactosyl-diacyl-glycerols COMMON-NAME - digalactosyldiacylglycerol-38:5 COMMENT - In this group of digalactosyldiacylglycerols, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 38, and the total number of double bonds in the two acyl groups adds up to 5. SYNONYMS - DGDG-38:5 SYNONYMS - DGDG38:5 // UNIQUE-ID - Digalactosyldiacylglycerols-38-6 TYPES - Galactosyl-galactosyl-diacyl-glycerols COMMON-NAME - digalactosyldiacylglycerol-38:6 COMMENT - In this group of digalactosyldiacylglycerols, the length of the two acyl chains, and the location and number of the double bonds varies. For each of the group members, the total number of carbon atoms in the two acyl chains adds up to 38, and the total number of double bonds in the two acyl groups adds up to 6. SYNONYMS - DGDG-38:6 SYNONYMS - DGDG38:6 // UNIQUE-ID - Delta-11-acyl-CoAs TYPES - Fatty-Acyl-CoA COMMON-NAME - a Δ11 acyl-CoA // UNIQUE-ID - Saturated-Fatty-Acyl-CoA TYPES - Fatty-Acyl-CoA COMMON-NAME - a 2,3,4-saturated fatty acyl CoA COMMENT - The fatty acid moiety typically has 14-24 carbon atoms. The 16- and 18-carbon fatty acids are the most common. /This type of fatty acid will not contain any double bonds in the 2, 3, and 4 positions. // UNIQUE-ID - VERY-LONG-CHAIN-FATTY-ACYL-COA TYPES - Fatty-Acyl-CoA COMMON-NAME - a very long chain fatty acyl-CoA COMMENT - The fatty acid moiety typically has larger than 18 carbon atoms. SYNONYMS - a very long-chain fatty acyl-CoA SYNONYMS - acyl-CoA // UNIQUE-ID - CPD0-2186 TYPES - Long-Chain-Acyl-CoAs COMMON-NAME - a hexadecenoyl-CoA (n-C16:1CoA) // UNIQUE-ID - Flavonol-3-O-D-Glucosides TYPES - Flavonol-3-O-Glycosides COMMON-NAME - a flavonol-3-O-D-glucoside // UNIQUE-ID - Flavonol-3-O-Galactosides TYPES - Flavonol-3-O-Glycosides COMMON-NAME - a flavonol 3-O-galactoside // UNIQUE-ID - Iso-dihydrocarvones TYPES - Dihydrocarvones COMMON-NAME - an iso dihydrocarvone // UNIQUE-ID - 10-apo-Carotenals TYPES - Apocarotenoids COMMON-NAME - a β-apo-10'-carotenal // UNIQUE-ID - 12-apo-Carotenals TYPES - Apocarotenoids COMMON-NAME - a 12'-apo-carotenal // UNIQUE-ID - 9-apo-Carotenones TYPES - Apocarotenoids COMMON-NAME - a 9-apo-carotenone // UNIQUE-ID - CPD-11452 TYPES - Carotenes COMMON-NAME - a myxoxanthophyll COMMENT - Myxoxanthophylls are a class of glycosylated carotenoids found in cyanobacteria. The carotenoid portion of these molecules ( = aglicone) is myxol, and the sugar moiety differs among the different species |CITS: [11479383]|. // UNIQUE-ID - CPD-11455 TYPES - Carotenes COMMON-NAME - oscillaxanthin // UNIQUE-ID - CPD-11473 TYPES - Ketocarotenoids COMMON-NAME - astaxanthin // UNIQUE-ID - 9-cis-Epoxycarotenoids TYPES - Xanthophylls COMMON-NAME - a 9-cis-epoxycarotenoid // UNIQUE-ID - Kanamycin-3-phosphates TYPES - Kanamycins COMMON-NAME - a kanamycin-3-phosphate // UNIQUE-ID - Charged-ASP-tRNAs TYPES - ASPARTYL-ASX-TRNAS COMMON-NAME - L-aspartyl-tRNAasp SYNONYMS - L-ASPARTYL-TRNA(ASP) // UNIQUE-ID - Charged-GLT-tRNAs TYPES - GLUTAMYL-GLX-TRNAS COMMON-NAME - L-glutamyl-tRNAGlu SYNONYMS - L-GLUTAMYL-TRNA(GLT) SYNONYMS - L-glutamyl-tRNAglt // UNIQUE-ID - GO:0004656 TYPES - GO:0019798 TYPES - GO:0031545 COMMON-NAME - procollagen-proline 4-dioxygenase activity SYNONYMS - collagen proline hydroxylase activity SYNONYMS - hydroxylase, collagen proline activity SYNONYMS - peptidyl proline hydroxylase activity SYNONYMS - procollagen-L-proline,2-oxoglutarate:oxygen oxidoreductase (4-hydroxylating) activity SYNONYMS - procollagen-proline,2-oxoglutarate-4-dioxygenase activity SYNONYMS - proline hydroxylase activity SYNONYMS - proline protocollagen hydroxylase activity SYNONYMS - proline, 2-oxoglutarate dioxygenase activity SYNONYMS - proline,2-oxoglutarate 4-dioxygenase activity SYNONYMS - prolyl 4-hydroxylase activity SYNONYMS - prolyl hydroxylase activity SYNONYMS - prolyl-glycyl-peptide, 2-oxoglutarate:oxygen oxidoreductase, 4-hydroxylating activity SYNONYMS - prolylprotocollagen dioxygenase activity SYNONYMS - prolylprotocollagen hydroxylase activity SYNONYMS - protocollagen hydroxylase activity SYNONYMS - protocollagen proline 4-hydroxylase activity SYNONYMS - protocollagen proline dioxygenase activity SYNONYMS - protocollagen proline hydroxylase activity SYNONYMS - protocollagen prolyl hydroxylase activity // UNIQUE-ID - GO:0019797 TYPES - GO:0019798 TYPES - GO:0031544 COMMON-NAME - procollagen-proline 3-dioxygenase activity SYNONYMS - procollagen-L-proline,2-oxoglutarate:oxygen oxidoreductase (3-hydroxylating) activity SYNONYMS - procollagen-proline,2-oxoglutarate 3-dioxygenase activity SYNONYMS - proline,2-oxoglutarate 3-dioxygenase activity SYNONYMS - prolyl 3-hydroxylase activity SYNONYMS - prolyl-4-hydroxyprolyl-glycyl-peptide, 2-oxoglutarate: oxygen oxidoreductase, 3-hydroxylating activity SYNONYMS - protocollagen proline 3-hydroxylase activity // UNIQUE-ID - GO:0004643 TYPES - GO:0016742 COMMON-NAME - phosphoribosylaminoimidazolecarboxamide formyltransferase activity SYNONYMS - 10-formyltetrahydrofolate:5'-phosphoribosyl-5-amino-4-imidazole-carboxamide N-formyltransferase activity SYNONYMS - 10-formyltetrahydrofolate:5'-phosphoribosyl-5-amino-4-imidazolecarboxamide formyltransferase activity SYNONYMS - 5'-phosphoribosyl-5-amino-4-imidazolecarboxamide formyltransferase activity SYNONYMS - 5-amino-1-ribosyl-4-imidazolecarboxamide 5'-phosphate transformylase activity SYNONYMS - 5-amino-4-imidazolecarboxamide ribonucleotide transformylase activity SYNONYMS - 5-amino-4-imidazolecarboxamide ribotide transformylase activity SYNONYMS - AICAR formyltransferase activity SYNONYMS - AICAR transformylase activity SYNONYMS - aminoimidazolecarboxamide ribonucleotide transformylase activity // UNIQUE-ID - GO:0004644 TYPES - GO:0016742 COMMON-NAME - phosphoribosylglycinamide formyltransferase activity SYNONYMS - 10-formyltetrahydrofolate:5'-phosphoribosylglycinamide N-formyltransferase activity SYNONYMS - 2-amino-N-ribosylacetamide 5'-phosphate transformylase activity SYNONYMS - 5'-phosphoribosylglycinamide transformylase activity SYNONYMS - 5,10-methenyltetrahydrofolate:2-amino-N-ribosylacetamide ribonucleotide transformylase activity SYNONYMS - GAR formyltransferase activity SYNONYMS - GAR TFase activity SYNONYMS - GAR transformylase activity SYNONYMS - GART activity SYNONYMS - glycinamide ribonucleotide transformylase activity // UNIQUE-ID - GO:0030407 TYPES - GO:0016742 COMMON-NAME - formimidoyltransferase activity SYNONYMS - formiminotransferase activity // UNIQUE-ID - GO:0008425 TYPES - GO:0030580 COMMON-NAME - 2-polyprenyl-6-methoxy-1,4-benzoquinone methyltransferase activity SYNONYMS - 2-polyprenyl-6-methoxy-1,4-benzoquinone methylase activity SYNONYMS - coenzyme Q biosynthesis methyltransferase activity SYNONYMS - coenzyme Q biosynthetic process methyltransferase activity SYNONYMS - ubiquinone biosynthesis methyltransferase activity SYNONYMS - ubiquinone biosynthetic process methyltransferase activity // UNIQUE-ID - GO:0016274 TYPES - GO:0016273 COMMON-NAME - protein-arginine N-methyltransferase activity // UNIQUE-ID - GO:0008469 TYPES - GO:0016274 TYPES - GO:0042054 COMMON-NAME - histone-arginine N-methyltransferase activity SYNONYMS - histone protein methylase activity SYNONYMS - histone protein methylase I SYNONYMS - nuclear protein (histone) N-methyltransferase activity SYNONYMS - protein methylase I activity SYNONYMS - S-adenosyl-L-methionine:histone-arginine nomega-methyltransferase activity SYNONYMS - S-adenosyl-L-methionine:histone-arginine omega-N-methyltransferase activity // UNIQUE-ID - GO:0018024 TYPES - GO:0016279 TYPES - GO:0042054 COMMON-NAME - histone-lysine N-methyltransferase activity SYNONYMS - histone H1-specific S-adenosylmethionine:protein-lysine N-methyltransferase activity SYNONYMS - protein (lysine) methyltransferase activity SYNONYMS - protein methylase 3 activity SYNONYMS - protein methylase III activity SYNONYMS - protein methyltransferase II activity SYNONYMS - S-adenosyl-L-methionine:histone-L-lysine 6-N-methyltransferase activity SYNONYMS - S-adenosyl-L-methionine:histone-L-lysine N6-methyltransferase activity // UNIQUE-ID - GO:0016422 TYPES - GO:0008174 COMMON-NAME - mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity SYNONYMS - messenger ribonucleate 2'-O-methyladenosine NG-methyltransferase activity SYNONYMS - S-adenosyl-L-methionine:mRNA (2'-O-methyladenosine-6-N-)-methyltransferase activity SYNONYMS - S-adenosyl-L-methionine:mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity // UNIQUE-ID - GO:0008176 TYPES - GO:0016423 COMMON-NAME - tRNA (guanine-N7-)-methyltransferase activity SYNONYMS - 7-methylguanine transfer ribonucleate methylase activity SYNONYMS - N7-methylguanine methylase activity SYNONYMS - S-adenosyl-L-methionine:tRNA (guanine-7-N-)-methyltransferase activity SYNONYMS - S-adenosyl-L-methionine:tRNA (guanine-N7-)-methyltransferase activity SYNONYMS - transfer ribonucleate guanine 7-methyltransferase activity SYNONYMS - tRNA guanine 7-methyltransferase activity // UNIQUE-ID - GO:0009019 TYPES - GO:0016423 COMMON-NAME - tRNA (guanine-N1-)-methyltransferase activity SYNONYMS - S-adenosyl-L-methionine:tRNA (guanine-1-N-)-methyltransferase activity SYNONYMS - S-adenosyl-L-methionine:tRNA (guanine-N1-)-methyltransferase activity SYNONYMS - transfer ribonucleate guanine 1-methyltransferase activity SYNONYMS - tRNA guanine 1-methyltransferase activity // UNIQUE-ID - GO:0016429 TYPES - GO:0016426 COMMON-NAME - tRNA (adenine-N1-)-methyltransferase activity SYNONYMS - 1-methyladenine transfer RNA methyltransferase activity SYNONYMS - adenine-1-methylase activity SYNONYMS - S-adenosyl-L-methionine:tRNA (adenine-1-N-)-methyltransferase activity SYNONYMS - S-adenosyl-L-methionine:tRNA (adenine-N1-)-methyltransferase activity SYNONYMS - transfer ribonucleate adenine 1-methyltransferase activity SYNONYMS - transfer RNA (adenine-1) methyltransferase activity // UNIQUE-ID - GO:0016428 TYPES - GO:0016427 COMMON-NAME - tRNA (cytosine-5-)-methyltransferase activity SYNONYMS - S-adenosyl-L-methionine:tRNA (cytosine-5-)-methyltransferase activity SYNONYMS - transfer ribonucleate cytosine 5-methyltransferase activity SYNONYMS - transfer RNA cytosine 5-methyltransferase activity // UNIQUE-ID - GO:0016433 TYPES - GO:0008649 COMMON-NAME - rRNA (adenine) methyltransferase activity // UNIQUE-ID - GO:0004313 TYPES - GO:0004312 TYPES - GO:0016418 COMMON-NAME - [acyl-carrier-protein] S-acetyltransferase activity SYNONYMS - [acyl-carrier protein] S-acetyltransferase activity SYNONYMS - ACAT activity SYNONYMS - acetyl coenzyme A-acyl-carrier-protein transacylase activity SYNONYMS - acetyl-CoA:acyl-carrier-protein S-acetyltransferase activity SYNONYMS - ACP acetyltransferase activity SYNONYMS - ACP S-acetyltransferase activity SYNONYMS - ACPacetyltransferase activity SYNONYMS - acyl-carrier-protein acetyltransferase activity SYNONYMS - acyl-carrier-protein S-acetyltransferase activity SYNONYMS - acyl-carrier-proteinacetyltransferase activity // UNIQUE-ID - GO:0004314 TYPES - GO:0004312 TYPES - GO:0016419 COMMON-NAME - [acyl-carrier-protein] S-malonyltransferase activity SYNONYMS - [acyl-carrier protein] S-malonyltransferase activity SYNONYMS - ACP S-malonyltransferase activity SYNONYMS - acyl carrier protein malonyltransferase activity SYNONYMS - acyl carrier proteinmalonyltransferase activity SYNONYMS - acyl-carrier-protein S-malonyltransferase activity SYNONYMS - FabD SYNONYMS - malonyl coenzyme A-acyl carrier protein transacylase activity SYNONYMS - malonyl transacylase activity SYNONYMS - malonyl transferase activity SYNONYMS - malonyl-CoA-acyl carrier protein transacylase activity SYNONYMS - malonyl-CoA:ACP transacylase activity SYNONYMS - malonyl-CoA:AcpM transacylase activity SYNONYMS - malonyl-CoA:acyl carrier protein transacylase activity SYNONYMS - malonyl-CoA:acyl-carrier-protein S-malonyltransferase activity SYNONYMS - MAT SYNONYMS - MCAT activity // UNIQUE-ID - GO:0004315 TYPES - GO:0004312 COMMON-NAME - 3-oxoacyl-[acyl-carrier-protein] synthase activity SYNONYMS - 3-ketoacyl-acyl carrier protein synthase activity SYNONYMS - 3-oxoacyl-[acyl-carrier protein] synthase activity SYNONYMS - 3-oxoacyl-ACP synthase activity SYNONYMS - 3-oxoacyl-acyl-carrier-protein synthase activity SYNONYMS - 3-oxoacyl:ACP synthase I SYNONYMS - acyl-acyl-carrier-protein:malonyl-acyl-carrier-protein C-acyltransferase (decarboxylating) SYNONYMS - acyl-malonyl acyl carrier protein-condensing enzyme activity SYNONYMS - acyl-malonyl(acyl-carrier-protein)-condensing enzyme activity SYNONYMS - beta-ketoacyl acyl carrier protein synthase activity SYNONYMS - beta-ketoacyl synthetase activity SYNONYMS - beta-ketoacyl-[acyl carrier protein] synthase activity SYNONYMS - beta-ketoacyl-ACP synthase I activity SYNONYMS - beta-ketoacyl-ACP synthetase activity SYNONYMS - beta-ketoacyl-acyl carrier protein synthase activity SYNONYMS - beta-ketoacyl-acyl carrier protein synthetase activity SYNONYMS - beta-ketoacyl-acyl-carrier-protein synthase I SYNONYMS - beta-ketoacylsynthase activity SYNONYMS - condensing enzyme activity SYNONYMS - FabB SYNONYMS - FabF1 SYNONYMS - fatty acid condensing enzyme activity SYNONYMS - KAS I activity SYNONYMS - KASI SYNONYMS - ketoacyl-ACP synthase activity // UNIQUE-ID - GO:0004607 TYPES - GO:0008374 COMMON-NAME - phosphatidylcholine-sterol O-acyltransferase activity SYNONYMS - LCAT (lecithin-cholesterol acyltransferase) SYNONYMS - LCAT activity SYNONYMS - lecithin--cholesterol acyltransferase activity SYNONYMS - lecithin:cholesterol acyltransferase activity SYNONYMS - phosphatidylcholine:sterol O-acyltransferase activity SYNONYMS - phospholipid--cholesterol acyltransferase activity // UNIQUE-ID - GO:0016406 TYPES - GO:0008374 COMMON-NAME - carnitine O-acyltransferase activity // UNIQUE-ID - GO:0016411 TYPES - GO:0008374 COMMON-NAME - acylglycerol O-acyltransferase activity // UNIQUE-ID - GO:0016413 TYPES - GO:0008374 TYPES - GO:0016407 COMMON-NAME - O-acetyltransferase activity // UNIQUE-ID - GO:0016414 TYPES - GO:0008374 TYPES - GO:0016415 COMMON-NAME - O-octanoyltransferase activity // UNIQUE-ID - GO:0047173 TYPES - GO:0008374 COMMON-NAME - phosphatidylcholine-retinol O-acyltransferase activity SYNONYMS - lecithin--retinol acyltransferase activity SYNONYMS - phosphatidylcholine:retinol-(cellular-retinol-binding-protein) O-acyltransferase activity SYNONYMS - phosphatidylcholine:retinol-[cellular-retinol-binding-protein] O-acyltransferase activity // UNIQUE-ID - GO:0047184 TYPES - GO:0008374 COMMON-NAME - 1-acylglycerophosphocholine O-acyltransferase activity SYNONYMS - 1-acyl-sn-glycero-3-phosphocholine acyltransferase activity SYNONYMS - 1-acylglycerophosphocholine O-acyltransferase activity SYNONYMS - acyl coenzyme A-monoacylphosphatidylcholine acyltransferase activity SYNONYMS - acyl-CoA:1-acyl-glycero-3-phosphocholine transacylase activity SYNONYMS - acyl-CoA:1-acyl-sn-glycero-3-phosphocholine O-acyltransferase activity SYNONYMS - lysolecithin acyltransferase activity SYNONYMS - lysophosphatide acyltransferase activity SYNONYMS - lysophosphatidylcholine acyltransferase activity // UNIQUE-ID - GO:0047196 TYPES - GO:0008374 COMMON-NAME - long-chain-alcohol O-fatty-acyltransferase activity SYNONYMS - acyl-CoA:long-chain-alcohol O-acyltransferase activity SYNONYMS - wax synthase activity SYNONYMS - wax-ester synthase activity // UNIQUE-ID - GO:0008080 TYPES - GO:0016407 TYPES - GO:0016410 COMMON-NAME - N-acetyltransferase activity // UNIQUE-ID - GO:0016418 TYPES - GO:0016407 TYPES - GO:0016417 COMMON-NAME - S-acetyltransferase activity // UNIQUE-ID - GO:0016453 TYPES - GO:0016407 TYPES - GO:0016408 COMMON-NAME - C-acetyltransferase activity // UNIQUE-ID - GO:0003988 TYPES - GO:0016408 COMMON-NAME - acetyl-CoA C-acyltransferase activity SYNONYMS - 2-keto-acyl thiolase activity SYNONYMS - 2-methylacetoacetyl-CoA thiolase SYNONYMS - 3-ketoacyl CoA thiolase activity SYNONYMS - 3-ketoacyl coenzyme A thiolase activity SYNONYMS - 3-ketoacyl thiolase activity SYNONYMS - 3-ketoacyl-CoA thiolase activity SYNONYMS - 3-ketothiolase activity SYNONYMS - 3-oxoacyl-CoA thiolase activity SYNONYMS - 3-oxoacyl-coenzyme A thiolase activity SYNONYMS - 6-oxoacyl-CoA thiolase activity SYNONYMS - acetoacetyl-CoA beta-ketothiolase activity SYNONYMS - acetyl-CoA acyltransferase activity SYNONYMS - acyl-CoA:acetyl-CoA C-acyltransferase activity SYNONYMS - beta-ketoacyl coenzyme A thiolase activity SYNONYMS - beta-ketoacyl-CoA thiolase activity SYNONYMS - beta-ketoadipyl coenzyme A thiolase activity SYNONYMS - beta-ketoadipyl-CoA thiolase activity SYNONYMS - beta-ketothiolase activity SYNONYMS - KAT SYNONYMS - ketoacyl-CoA acyltransferase activity SYNONYMS - ketoacyl-coenzyme A thiolase activity SYNONYMS - long-chain 3-oxoacyl-CoA thiolase activity SYNONYMS - oxoacyl-coenzyme A thiolase activity SYNONYMS - pro-3-ketoacyl-CoA thiolase activity SYNONYMS - thiolase I // UNIQUE-ID - GO:0004321 TYPES - GO:0016408 COMMON-NAME - fatty-acyl-CoA synthase activity SYNONYMS - acyl-CoA:malonyl-CoA C-acyltransferase (decarboxylating, oxoacyl- and enoyl- reducing) SYNONYMS - yeast fatty acid synthase activity // UNIQUE-ID - GO:0047961 TYPES - GO:0016410 COMMON-NAME - glycine N-acyltransferase activity SYNONYMS - acyl-CoA:glycine N-acyltransferase activity SYNONYMS - glycine acyltransferase activity SYNONYMS - glycine-N-acylase activity // UNIQUE-ID - GO:0016419 TYPES - GO:0016417 TYPES - GO:0016420 COMMON-NAME - S-malonyltransferase activity // UNIQUE-ID - GO:0016263 TYPES - GO:0048531 COMMON-NAME - glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase activity SYNONYMS - Core 1 GalT SYNONYMS - UDP-galactose:glycoprotein-N-acetyl-D-galactosamine 3-beta-D-galactosyltransferase activity SYNONYMS - UDPgalactose:glycoprotein-N-acetyl-D-galactosamine 3-beta-D-galactosyltransferase activity SYNONYMS - uridine diphosphogalactose-mucin beta-(1->3)-galactosyltransferase activity // UNIQUE-ID - GO:0004662 TYPES - GO:0004661 COMMON-NAME - CAAX-protein geranylgeranyltransferase activity SYNONYMS - geranylgeranyl-diphosphate:protein-cysteine geranyltransferase activity SYNONYMS - geranylgeranyltransferase type I activity SYNONYMS - GGTase-I activity SYNONYMS - GGTaseI activity SYNONYMS - protein geranylgeranyltransferase type I SYNONYMS - type I protein geranyl-geranyltransferase activity // UNIQUE-ID - GO:0004663 TYPES - GO:0004661 COMMON-NAME - Rab-protein geranylgeranyltransferase activity SYNONYMS - geranylgeranyl-diphosphate,geranylgeranyl-diphosphate:protein-cysteine geranyltransferase activity SYNONYMS - GGTase-II activity SYNONYMS - GGTaseII activity SYNONYMS - protein geranylgeranyltransferase type II activity SYNONYMS - Rab geranylgeranyltransferase activity SYNONYMS - RabGGTase activity SYNONYMS - type II protein geranyl-geranyltransferase activity // UNIQUE-ID - GO:0004676 TYPES - GO:0004674 COMMON-NAME - 3-phosphoinositide-dependent protein kinase activity // UNIQUE-ID - GO:0004677 TYPES - GO:0004674 COMMON-NAME - DNA-dependent protein kinase activity // UNIQUE-ID - GO:0004679 TYPES - GO:0004674 COMMON-NAME - AMP-activated protein kinase activity SYNONYMS - 5'-AMP-activated protein kinase activity SYNONYMS - SNF1A/AMP-activated protein kinase activity // UNIQUE-ID - GO:0004680 TYPES - GO:0004674 COMMON-NAME - casein kinase activity // UNIQUE-ID - GO:0004683 TYPES - GO:0004674 COMMON-NAME - calmodulin-dependent protein kinase activity SYNONYMS - ATP:caldesmon O-phosphotransferase activity SYNONYMS - ATP:protein phosphotransferase (Ca2+/calmodulin-dependent) activity SYNONYMS - Ca2+/calmodulin-dependent microtubule-associated protein 2 kinase activity SYNONYMS - Ca2+/calmodulin-dependent protein kinase 1 activity SYNONYMS - Ca2+/calmodulin-dependent protein kinase activity SYNONYMS - Ca2+/calmodulin-dependent protein kinase II activity SYNONYMS - Ca2+/calmodulin-dependent protein kinase IV activity SYNONYMS - Ca2+/calmodulin-dependent protein kinase kinase activity SYNONYMS - Ca2+/calmodulin-dependent protein kinase kinase beta activity SYNONYMS - Ca2+/CaM-dependent kinase activity SYNONYMS - calcium- and calmodulin-dependent protein kinase activity SYNONYMS - calcium/calmodulin-dependent protein kinase activity SYNONYMS - calcium/calmodulin-dependent protein kinase type II activity SYNONYMS - caldesmon kinase (phosphorylating) activity SYNONYMS - caldesmon kinase activity SYNONYMS - calmodulin regulated protein kinase activity SYNONYMS - calmodulin-dependent kinase II activity SYNONYMS - calmodulin-dependent protein kinase I activity SYNONYMS - CaM kinase activity SYNONYMS - CaM kinase II activity SYNONYMS - CAM PKII SYNONYMS - CaM-regulated serine/threonine kinase activity SYNONYMS - CaMKI SYNONYMS - CaMKII SYNONYMS - CaMKIV SYNONYMS - CaMKKalpha SYNONYMS - CaMKKbeta SYNONYMS - microtubule-associated protein 2 kinase activity SYNONYMS - multifunctional calcium- and calmodulin-regulated protein kinase activity SYNONYMS - multifunctional calcium/calmodulin regulated protein kinase activity SYNONYMS - STK20 // UNIQUE-ID - GO:0004687 TYPES - GO:0004674 COMMON-NAME - myosin light chain kinase activity SYNONYMS - ATP:myosin-light-chain O-phosphotransferase SYNONYMS - ATP:myosin-light-chain O-phosphotransferase activity SYNONYMS - calcium/calmodulin-dependent myosin light chain kinase activity SYNONYMS - MLCK SYNONYMS - MLCkase activity SYNONYMS - myosin kinase activity SYNONYMS - myosin light chain protein kinase activity SYNONYMS - myosin light-chain kinase SYNONYMS - myosin light-chain kinase (phosphorylating) SYNONYMS - myosin light-chain kinase (phosphorylating) activity SYNONYMS - myosin light-chain kinase activity SYNONYMS - myosin-light-chain kinase activity SYNONYMS - smooth-muscle-myosin-light-chain kinase activity SYNONYMS - STK18 // UNIQUE-ID - GO:0004690 TYPES - GO:0004674 COMMON-NAME - cyclic nucleotide-dependent protein kinase activity // UNIQUE-ID - GO:0004693 TYPES - GO:0004674 COMMON-NAME - cyclin-dependent protein kinase activity SYNONYMS - ATP:cyclin phosphotransferase activity SYNONYMS - Bur1 SYNONYMS - Bur1 Cdk SYNONYMS - Cak1 SYNONYMS - Cak1p SYNONYMS - cdc2 SYNONYMS - cdc2 kinase activity SYNONYMS - Cdc28p SYNONYMS - CDK SYNONYMS - CDK activity SYNONYMS - CDK, catalytic subunit activity SYNONYMS - cdk-activating kinase activity SYNONYMS - Cdk-activating protein kinase activity SYNONYMS - cdk1 SYNONYMS - cdk2 SYNONYMS - Cdk2 SYNONYMS - cdk3 SYNONYMS - cdk4 SYNONYMS - cdk5 SYNONYMS - cdk6 SYNONYMS - cdk7 SYNONYMS - cdk8 SYNONYMS - cdk9 SYNONYMS - cyclin A-activated cdc2 SYNONYMS - cyclin A-activated cdk2 SYNONYMS - cyclin D-cdk6 kinase activity SYNONYMS - cyclin D-dependent kinase activity SYNONYMS - cyclin E kinase activity SYNONYMS - cyclin-A associated kinase activity SYNONYMS - cyclin-dependent kinase 6 activity SYNONYMS - cyclin-dependent kinase activity SYNONYMS - cyclin-dependent kinase-2 activity SYNONYMS - cyclin-dependent kinase-4 activity SYNONYMS - cyclin-dependent protein kinase, intrinsic catalyst activity SYNONYMS - cyk SYNONYMS - D-type cyclin kinase activity SYNONYMS - nclk SYNONYMS - neuronal cdc2-like kinase activity SYNONYMS - PCTAIRE-1 SYNONYMS - STK25 // UNIQUE-ID - GO:0004694 TYPES - GO:0004674 COMMON-NAME - eukaryotic translation initiation factor 2alpha kinase activity // UNIQUE-ID - GO:0004696 TYPES - GO:0004674 COMMON-NAME - glycogen synthase kinase 3 activity // UNIQUE-ID - GO:0004703 TYPES - GO:0004674 COMMON-NAME - G-protein coupled receptor kinase activity SYNONYMS - ATP:G-protein-coupled receptor phosphotransferase activity SYNONYMS - G protein coupled receptor phosphorylating protein kinase activity SYNONYMS - G protein-coupled receptor kinase activity SYNONYMS - G-protein-coupled receptor kinase activity SYNONYMS - G-protein-coupled receptor phosphorylating protein kinase activity SYNONYMS - GPCR kinase activity SYNONYMS - GPCR phosphorylating protein kinase activity SYNONYMS - GPCRK SYNONYMS - GRK4 SYNONYMS - GRK5 SYNONYMS - GRK6 SYNONYMS - STK16 // UNIQUE-ID - GO:0008384 TYPES - GO:0004674 COMMON-NAME - IkappaB kinase activity COMMENT - Note that phosphorylation of IkappaB targets it for proteasomal degradation and allows the nuclear translocation of kB. The kinase is composed of alpha, beta and gamma subunits, of which the latter does not have kinase activity but is presumed to play a regulatory role. SYNONYMS - ATP:IkappaB protein phosphotransferase activity SYNONYMS - CHUK SYNONYMS - ikappaB kinase activity SYNONYMS - IKBKA SYNONYMS - IKBKB SYNONYMS - IKK SYNONYMS - IKK-1 SYNONYMS - IKK-2 SYNONYMS - inhibitor of NF-kappaB kinase activity SYNONYMS - inhibitor of NFkappaB kinase activity SYNONYMS - STK12 SYNONYMS - TANK-binding kinase 1 activity SYNONYMS - TBK1 // UNIQUE-ID - GO:0005025 TYPES - GO:0005024 COMMON-NAME - transforming growth factor beta receptor activity, type I SYNONYMS - transforming growth factor beta ligand binding to type I receptor SYNONYMS - type I TGF-beta receptor activity SYNONYMS - type I TGFbeta receptor activity SYNONYMS - type I transforming growth factor beta receptor activity // UNIQUE-ID - GO:0005026 TYPES - GO:0005024 COMMON-NAME - transforming growth factor beta receptor activity, type II SYNONYMS - transforming growth factor beta ligand binding to type II receptor SYNONYMS - type II TGF-beta receptor activity SYNONYMS - type II TGFbeta receptor activity SYNONYMS - type II transforming growth factor beta receptor activity // UNIQUE-ID - GO:0017002 TYPES - GO:0005024 COMMON-NAME - activin receptor activity // UNIQUE-ID - GO:0004705 TYPES - GO:0016909 COMMON-NAME - JUN kinase activity SYNONYMS - c-Jun N-terminal kinase activity SYNONYMS - JNK SYNONYMS - JNK3alpha1 SYNONYMS - SAPK1 // UNIQUE-ID - GO:0008339 TYPES - GO:0016909 COMMON-NAME - MP kinase activity SYNONYMS - Mpk2 SYNONYMS - p38 SYNONYMS - SAPK2 // UNIQUE-ID - GO:0004708 TYPES - GO:0004712 COMMON-NAME - MAP kinase kinase activity SYNONYMS - ATP:protein phosphotransferase (MAPKKK-activated) activity SYNONYMS - ERK activator kinase activity SYNONYMS - MAP kinase kinase 4 activity SYNONYMS - MAP kinase kinase 7 activity SYNONYMS - MAP kinase or ERK kinase activity SYNONYMS - MAP2K SYNONYMS - MAPKK SYNONYMS - MAPKK activity SYNONYMS - MAPKK1 SYNONYMS - MEK activity SYNONYMS - MEK1 SYNONYMS - MEK2 SYNONYMS - mitogen-activated protein kinase kinase activity SYNONYMS - MKK SYNONYMS - MKK2 SYNONYMS - MKK4 SYNONYMS - MKK6 SYNONYMS - MKK7 SYNONYMS - STK27 // UNIQUE-ID - GO:0004715 TYPES - GO:0004713 COMMON-NAME - non-membrane spanning protein tyrosine kinase activity SYNONYMS - ABL SYNONYMS - ABL1 SYNONYMS - ABL2 SYNONYMS - ABLL SYNONYMS - ACK1 SYNONYMS - ACK2 SYNONYMS - AGMX1 SYNONYMS - ARG SYNONYMS - ATK SYNONYMS - ATP:protein-L-tyrosine O-phosphotransferase (non-specific) activity SYNONYMS - ATP:protein-tyrosine O-phosphotransferase activity SYNONYMS - BLK SYNONYMS - Bmk SYNONYMS - BMX SYNONYMS - BRK SYNONYMS - Bruton's tyrosine kinase activity SYNONYMS - Bsk SYNONYMS - BTK SYNONYMS - BTKL SYNONYMS - CAKb SYNONYMS - cdgip SYNONYMS - CHK SYNONYMS - CSK SYNONYMS - CTK SYNONYMS - CYL SYNONYMS - cytoplasmic protein tyrosine kinase activity SYNONYMS - EMT SYNONYMS - ETK SYNONYMS - fadk SYNONYMS - FAK SYNONYMS - FAK2 SYNONYMS - FER SYNONYMS - fert1/2 SYNONYMS - FES SYNONYMS - FGR SYNONYMS - focal adhesion kinase activity SYNONYMS - FPS SYNONYMS - FRK SYNONYMS - FYN SYNONYMS - HCK SYNONYMS - HCTK SYNONYMS - HYL SYNONYMS - IMD1 SYNONYMS - ITK SYNONYMS - IYK SYNONYMS - JAK1 SYNONYMS - JAK2 SYNONYMS - JAK3 SYNONYMS - janus kinase 1 activity SYNONYMS - janus kinase 2 activity SYNONYMS - janus kinase 3 activity SYNONYMS - JTK1 SYNONYMS - JTK9 SYNONYMS - L-JAK SYNONYMS - LCK SYNONYMS - LSK SYNONYMS - LYN SYNONYMS - MATK SYNONYMS - non-specific protein-tyrosine kinase activity SYNONYMS - Ntk SYNONYMS - p60c-src protein tyrosine kinase activity SYNONYMS - PKB SYNONYMS - PSCTK SYNONYMS - PSCTK1 SYNONYMS - PSCTK2 SYNONYMS - PSCTK4 SYNONYMS - PSCTK5 SYNONYMS - PTK2 SYNONYMS - PTK2B SYNONYMS - PTK6 SYNONYMS - PYK2 SYNONYMS - RAFTK SYNONYMS - RAK SYNONYMS - Rlk SYNONYMS - Sik SYNONYMS - SLK SYNONYMS - SRC SYNONYMS - SRC2 SYNONYMS - SRK SYNONYMS - SRM SYNONYMS - SRMS SYNONYMS - STD SYNONYMS - SYK SYNONYMS - SYN SYNONYMS - Tck SYNONYMS - TEC SYNONYMS - TNK1 SYNONYMS - Tsk SYNONYMS - TXK SYNONYMS - TYK2 SYNONYMS - TYK3 SYNONYMS - YES1 SYNONYMS - YK2 SYNONYMS - ZAP70 // UNIQUE-ID - GO:0005003 TYPES - GO:0004714 COMMON-NAME - ephrin receptor activity SYNONYMS - Eph receptor activity // UNIQUE-ID - GO:0005006 TYPES - GO:0004714 COMMON-NAME - epidermal growth factor receptor activity SYNONYMS - EGF receptor activity SYNONYMS - EGFR SYNONYMS - TGF-alpha receptor activity SYNONYMS - transforming growth factor-alpha receptor activity // UNIQUE-ID - GO:0005007 TYPES - GO:0004714 COMMON-NAME - fibroblast growth factor receptor activity SYNONYMS - FGF receptor activity SYNONYMS - FGFR // UNIQUE-ID - GO:0005008 TYPES - GO:0004714 COMMON-NAME - hepatocyte growth factor receptor activity SYNONYMS - HGF receptor activity // UNIQUE-ID - GO:0005020 TYPES - GO:0004714 COMMON-NAME - stem cell factor receptor activity // UNIQUE-ID - GO:0005021 TYPES - GO:0004714 COMMON-NAME - vascular endothelial growth factor receptor activity // UNIQUE-ID - GO:0004127 TYPES - GO:0019201 COMMON-NAME - cytidylate kinase activity SYNONYMS - ATP:CMP phosphotransferase activity SYNONYMS - ATP:UMP-CMP phosphotransferase activity SYNONYMS - CMP kinase activity SYNONYMS - CTP:CMP phosphotransferase activity SYNONYMS - cytidine monophosphate kinase activity SYNONYMS - dCMP kinase activity SYNONYMS - deoxycytidine monophosphokinase activity SYNONYMS - deoxycytidylate kinase activity SYNONYMS - pyrimidine nucleoside monophosphate kinase activity SYNONYMS - UMP-CMP kinase activity // UNIQUE-ID - GO:0004001 TYPES - GO:0019206 COMMON-NAME - adenosine kinase activity SYNONYMS - adenosine 5-phosphotransferase activity SYNONYMS - adenosine kinase (phosphorylating) SYNONYMS - ATP:adenosine 5'-phosphotransferase activity // UNIQUE-ID - GO:0004849 TYPES - GO:0019206 COMMON-NAME - uridine kinase activity SYNONYMS - ATP:uridine 5'-phosphotransferase activity SYNONYMS - pyrimidine ribonucleoside kinase activity SYNONYMS - uridine kinase (phosphorylating) SYNONYMS - uridine kinase reaction SYNONYMS - uridine monophosphokinase activity SYNONYMS - uridine phosphokinase activity SYNONYMS - uridine-cytidine kinase activity // UNIQUE-ID - GO:0019136 TYPES - GO:0019206 COMMON-NAME - deoxynucleoside kinase activity SYNONYMS - ATP:deoxynucleoside 5'-phosphotransferase activity SYNONYMS - D. melanogaster deoxynucleoside kinase activity SYNONYMS - Dm-dNK SYNONYMS - ms-dNK SYNONYMS - Ms-dNK activity SYNONYMS - multifunctional deoxynucleoside kinase activity SYNONYMS - multispecific deoxynucleoside kinase activity SYNONYMS - multisubstrate deoxyribonucleoside kinase activity // UNIQUE-ID - GO:0046404 TYPES - GO:0051733 TYPES - GO:0051734 COMMON-NAME - ATP-dependent polydeoxyribonucleotide 5'-hydroxyl-kinase activity SYNONYMS - ATP-dependent DNA 5'-hydroxyl-kinase activity SYNONYMS - ATP-dependent DNA kinase activity SYNONYMS - ATP-dependent polynucleotide 5'-hydroxyl-kinase activity SYNONYMS - ATP-dependent polynucleotide kinase activity SYNONYMS - ATP:5'-dephosphopolydeoxyribonucleotide 5'-phosphotransferase activity // UNIQUE-ID - GO:0003890 TYPES - GO:0003887 COMMON-NAME - beta DNA polymerase activity SYNONYMS - DNA polymerase beta // UNIQUE-ID - GO:0003895 TYPES - GO:0003887 COMMON-NAME - gamma DNA-directed DNA polymerase activity SYNONYMS - DNA polymerase gamma // UNIQUE-ID - GO:0016450 TYPES - GO:0003887 COMMON-NAME - kappa DNA polymerase activity // UNIQUE-ID - GO:0016451 TYPES - GO:0003887 COMMON-NAME - nu DNA polymerase activity // UNIQUE-ID - GO:0003720 TYPES - GO:0003964 COMMON-NAME - telomerase activity COMMENT - Consider also annotating to the molecular function term 'telomeric DNA binding ; GO:0042162'. // UNIQUE-ID - GO:0003896 TYPES - GO:0003899 COMMON-NAME - DNA primase activity // UNIQUE-ID - GO:0004781 TYPES - GO:0004779 COMMON-NAME - sulfate adenylyltransferase (ATP) activity SYNONYMS - adenosine-5'-triphosphate sulfurylase activity SYNONYMS - adenosinetriphosphate sulfurylase activity SYNONYMS - adenylylsulfate pyrophosphorylase activity SYNONYMS - ATP sulfurylase activity SYNONYMS - ATP-sulfurylase activity SYNONYMS - ATP:sulfate adenylyltransferase activity SYNONYMS - sulfate adenylate transferase activity SYNONYMS - sulfurylase activity SYNONYMS - sulphate adenylyltransferase (ATP) activity // UNIQUE-ID - GO:0003983 TYPES - GO:0051748 COMMON-NAME - UTP:glucose-1-phosphate uridylyltransferase activity SYNONYMS - glucose-1-phosphate uridylyltransferase activity SYNONYMS - UDP glucose pyrophosphorylase activity SYNONYMS - UDP-glucose diphosphorylase activity SYNONYMS - UDP-glucose pyrophosphorylase activity SYNONYMS - UDPG phosphorylase activity SYNONYMS - UDPG pyrophosphorylase activity SYNONYMS - uridine 5'-diphosphoglucose pyrophosphorylase activity SYNONYMS - uridine diphosphate-D-glucose pyrophosphorylase activity SYNONYMS - uridine diphosphoglucose pyrophosphorylase activity SYNONYMS - uridine-diphosphate glucose pyrophosphorylase activity SYNONYMS - UTP-glucose-1-phosphate uridylyltransferase activity SYNONYMS - UTP:alpha-D-glucose-1-phosphate uridylyltransferase activity // UNIQUE-ID - GO:0004192 TYPES - GO:0004190 COMMON-NAME - cathepsin D activity // UNIQUE-ID - GO:0004193 TYPES - GO:0004190 COMMON-NAME - cathepsin E activity SYNONYMS - cathepsin D-like acid proteinase activity SYNONYMS - cathepsin D-type proteinase activity SYNONYMS - cathepsin E-like acid proteinase activity SYNONYMS - EMAP SYNONYMS - erythrocyte membrane aspartic proteinase activity SYNONYMS - non-pepsin proteinase activity SYNONYMS - slow-moving proteinase activity SYNONYMS - SMP // UNIQUE-ID - GO:0004194 TYPES - GO:0004190 COMMON-NAME - pepsin A activity SYNONYMS - elixir lactate of pepsin SYNONYMS - fundus-pepsin SYNONYMS - lactated pepsin SYNONYMS - lactated pepsin elixir SYNONYMS - P I SYNONYMS - P II SYNONYMS - pepsin activity SYNONYMS - pepsin D SYNONYMS - pepsin fortior SYNONYMS - pepsin R // UNIQUE-ID - GO:0004195 TYPES - GO:0004190 COMMON-NAME - renin activity SYNONYMS - angiotensin-forming enzyme activity SYNONYMS - angiotensinogenase activity // UNIQUE-ID - GO:0004198 TYPES - GO:0004197 COMMON-NAME - calcium-dependent cysteine-type endopeptidase activity SYNONYMS - calpain activity // UNIQUE-ID - GO:0004213 TYPES - GO:0004197 COMMON-NAME - cathepsin B activity SYNONYMS - cathepsin B1 activity SYNONYMS - cathepsin II // UNIQUE-ID - GO:0004215 TYPES - GO:0004197 COMMON-NAME - cathepsin H activity SYNONYMS - aleurain activity SYNONYMS - benzoylarginine-naphthylamide (BANA) hydrolase activity SYNONYMS - cathepsin B3 activity SYNONYMS - cathepsin Ba SYNONYMS - cathepsin BA activity SYNONYMS - N-benzoylarginine-beta-naphthylamide hydrolase activity // UNIQUE-ID - GO:0004216 TYPES - GO:0004197 COMMON-NAME - cathepsin K activity SYNONYMS - cathepsin O activity SYNONYMS - cathepsin O2 activity SYNONYMS - cathepsin X activity // UNIQUE-ID - GO:0004217 TYPES - GO:0004197 COMMON-NAME - cathepsin L activity SYNONYMS - Aldrichina grahami cysteine proteinase // UNIQUE-ID - GO:0004218 TYPES - GO:0004197 COMMON-NAME - cathepsin S activity // UNIQUE-ID - GO:0008129 TYPES - GO:0004197 COMMON-NAME - actinidain activity SYNONYMS - actinidia anionic protease activity SYNONYMS - actinidin activity SYNONYMS - proteinase A2 of actinidia chinensis // UNIQUE-ID - GO:0008423 TYPES - GO:0004197 COMMON-NAME - bleomycin hydrolase activity SYNONYMS - aminopeptidase C (Lactococcus lactis) // UNIQUE-ID - GO:0016946 TYPES - GO:0004197 COMMON-NAME - cathepsin F activity // UNIQUE-ID - GO:0030693 TYPES - GO:0004197 COMMON-NAME - caspase activity SYNONYMS - caspase-1 activity SYNONYMS - caspase-10 activity SYNONYMS - caspase-2 activity SYNONYMS - caspase-3 activity SYNONYMS - caspase-4 activity SYNONYMS - caspase-5 activity SYNONYMS - caspase-6 activity SYNONYMS - caspase-7 activity SYNONYMS - caspase-8 activity SYNONYMS - caspase-9 activity SYNONYMS - effector caspase activity SYNONYMS - signaling (initiator) caspase activity // UNIQUE-ID - GO:0004228 TYPES - GO:0004222 COMMON-NAME - gelatinase A activity SYNONYMS - 3/4 collagenase activity SYNONYMS - 72 kDa gelatinase type A SYNONYMS - 72-kDa gelatinase activity SYNONYMS - collagenase IV SYNONYMS - collagenase type IV SYNONYMS - matrix metalloproteinase 2 activity SYNONYMS - matrix metalloproteinase 5 SYNONYMS - MMP 2 SYNONYMS - MMP-2 SYNONYMS - type IV collagen metalloproteinase SYNONYMS - type IV collagenase activity SYNONYMS - type IV collagenase/gelatinase activity // UNIQUE-ID - GO:0004229 TYPES - GO:0004222 COMMON-NAME - gelatinase B activity SYNONYMS - 92-kDa gelatinase activity SYNONYMS - 92-kDa type IV collagenase activity SYNONYMS - 95 kDa type IV collagenase/gelatinase activity SYNONYMS - collagenase IV SYNONYMS - collagenase type IV SYNONYMS - gelatinase MMP 9 SYNONYMS - macrophage gelatinase activity SYNONYMS - matrix metalloproteinase 9 activity SYNONYMS - MMP 9 SYNONYMS - MMP-9 SYNONYMS - type IV collagen metalloproteinase SYNONYMS - type V collagenase activity // UNIQUE-ID - GO:0004231 TYPES - GO:0004222 COMMON-NAME - insulysin activity SYNONYMS - IDE SYNONYMS - insulin protease activity SYNONYMS - insulin proteinase activity SYNONYMS - insulin-degrading enzyme activity SYNONYMS - insulin-degrading neutral proteinase activity SYNONYMS - insulin-glucagon protease activity SYNONYMS - insulin-specific protease activity SYNONYMS - insulinase activity SYNONYMS - metalloinsulinase activity // UNIQUE-ID - GO:0004234 TYPES - GO:0004222 TYPES - GO:0042708 COMMON-NAME - macrophage elastase activity SYNONYMS - human macrophage metalloelastase (HME) SYNONYMS - matrix metalloproteinase 12 activity SYNONYMS - metalloelastase activity SYNONYMS - metalloesterase activity SYNONYMS - MMP-12 // UNIQUE-ID - GO:0004235 TYPES - GO:0004222 COMMON-NAME - matrilysin activity SYNONYMS - matrin activity SYNONYMS - matrix metalloproteinase 7 activity SYNONYMS - matrix metalloproteinase pump 1 SYNONYMS - metalloproteinase pump-1 SYNONYMS - MMP SYNONYMS - MMP 7 SYNONYMS - MMP-7 SYNONYMS - PUMP SYNONYMS - PUMP-1 activity SYNONYMS - PUMP-1 proteinase activity SYNONYMS - putative (or punctuated) metalloproteinase-1 activity SYNONYMS - putative metalloproteinase activity SYNONYMS - uterine metalloendopeptidase activity // UNIQUE-ID - GO:0004243 TYPES - GO:0004222 COMMON-NAME - mitochondrial intermediate peptidase activity SYNONYMS - MIP SYNONYMS - mitochondrial intermediate precursor-processing proteinase activity // UNIQUE-ID - GO:0004245 TYPES - GO:0004222 COMMON-NAME - neprilysin activity SYNONYMS - acute lymphoblastic leukemia antigen SYNONYMS - CALLA SYNONYMS - CALLA (common acute lymphoblastic leukemia-associated) antigens SYNONYMS - CALLA antigen SYNONYMS - CALLA glycoprotein SYNONYMS - CALLA glycoproteins SYNONYMS - CD10 SYNONYMS - common acute lymphoblastic leukemia antigen SYNONYMS - common acute lymphoblastic leukemia-associated antigens SYNONYMS - endopeptidase 24.11 SYNONYMS - endopeptidase-2 activity SYNONYMS - enkephalinase activity SYNONYMS - kidney-brush-border neutral endopeptidase SYNONYMS - kidney-brush-border neutral peptidase SYNONYMS - kidney-brush-border neutral proteinase activity SYNONYMS - membrane metalloendopeptidase activity SYNONYMS - neutral endopeptidase 24.11 SYNONYMS - neutral endopeptidase activity SYNONYMS - neutral metallendopeptidase activity // UNIQUE-ID - GO:0004248 TYPES - GO:0004222 COMMON-NAME - stromelysin 1 activity SYNONYMS - collagen-activating protein SYNONYMS - collagenase activating protein SYNONYMS - matrix metalloproteinase 3 activity SYNONYMS - MMP-3 SYNONYMS - neutral proteoglycanase activity SYNONYMS - procollagenase activator SYNONYMS - proteoglycanase activity SYNONYMS - stromelysin SYNONYMS - transin activity // UNIQUE-ID - GO:0008133 TYPES - GO:0004222 COMMON-NAME - collagenase activity // UNIQUE-ID - GO:0008450 TYPES - GO:0004222 COMMON-NAME - O-sialoglycoprotein endopeptidase activity SYNONYMS - glycophorin A proteinase activity SYNONYMS - glycoprotease activity SYNONYMS - glycoproteinase activity SYNONYMS - sialoglycoprotease activity SYNONYMS - sialoglycoproteinase activity // UNIQUE-ID - GO:0008533 TYPES - GO:0004222 COMMON-NAME - astacin activity SYNONYMS - Astacus proteinase activity SYNONYMS - astacus proteinase activity SYNONYMS - crayfish small-molecule proteinase activity // UNIQUE-ID - GO:0016511 TYPES - GO:0004222 COMMON-NAME - endothelin-converting enzyme activity // UNIQUE-ID - GO:0016919 TYPES - GO:0004222 COMMON-NAME - nardilysin activity SYNONYMS - N-arginine dibasic convertase activity SYNONYMS - NRD convertase activity SYNONYMS - NRD-convertase activity // UNIQUE-ID - GO:0017026 TYPES - GO:0004222 COMMON-NAME - procollagen C-endopeptidase activity SYNONYMS - BMP1 SYNONYMS - carboxyprocollagen peptidase activity SYNONYMS - procollagen C-proteinase activity SYNONYMS - procollagen C-terminal peptidase activity SYNONYMS - procollagen C-terminal proteinase activity SYNONYMS - procollagen carboxy-terminal proteinase activity SYNONYMS - procollagen carboxypeptidase activity SYNONYMS - procollagen peptidase activity // UNIQUE-ID - GO:0017074 TYPES - GO:0004222 COMMON-NAME - procollagen N-endopeptidase activity SYNONYMS - aminoprocollagen peptidase activity SYNONYMS - aminoterminal procollagen peptidase activity SYNONYMS - procollagen aminopeptidase activity SYNONYMS - procollagen aminoterminal protease activity SYNONYMS - procollagen N-proteinase activity SYNONYMS - procollagen N-terminal peptidase activity SYNONYMS - procollagen N-terminal proteinase activity SYNONYMS - type I/II procollagen N-proteinase activity SYNONYMS - type III procollagen // UNIQUE-ID - GO:0030303 TYPES - GO:0004222 COMMON-NAME - stromelysin 2 activity SYNONYMS - matrix metalloproteinase 10 activity SYNONYMS - MMP-10 SYNONYMS - proteoglycanase 2 SYNONYMS - transin 2 activity // UNIQUE-ID - GO:0030019 TYPES - GO:0004295 COMMON-NAME - tryptase activity SYNONYMS - lung tryptase activity SYNONYMS - mast cell neutral proteinase activity SYNONYMS - mast cell protease II activity SYNONYMS - mast cell proteinase II SYNONYMS - mast cell serine proteinase II SYNONYMS - mast cell serine proteinase tryptase activity SYNONYMS - mast cell tryptase activity SYNONYMS - pituitary tryptase activity SYNONYMS - rat mast cell protease II SYNONYMS - skin tryptase activity SYNONYMS - tryptase M // UNIQUE-ID - GO:0004281 TYPES - GO:0008132 COMMON-NAME - pancreatic elastase II activity SYNONYMS - pancreatic elastase 2 // UNIQUE-ID - GO:0008125 TYPES - GO:0008132 COMMON-NAME - pancreatic elastase I activity SYNONYMS - elaszym SYNONYMS - pancreatopeptidase E activity SYNONYMS - serine elastase // UNIQUE-ID - GO:0004285 TYPES - GO:0016808 COMMON-NAME - proprotein convertase 1 activity SYNONYMS - NEC 1 activity SYNONYMS - neuroendocrine convertase 1 activity SYNONYMS - PC1 activity SYNONYMS - prohormone convertase 3 SYNONYMS - prohormone convertase I activity // UNIQUE-ID - GO:0004286 TYPES - GO:0016808 COMMON-NAME - proprotein convertase 2 activity SYNONYMS - NEC 2 activity SYNONYMS - neuroendocrine convertase 2 activity SYNONYMS - PC2 activity SYNONYMS - prohormone convertase II activity // UNIQUE-ID - GO:0004843 TYPES - GO:0019783 COMMON-NAME - ubiquitin-specific protease activity COMMENT - Note that this term encompasses hydrolysis of any type of bonds formed between ubiquitin and another molecule. SYNONYMS - UBP SYNONYMS - UCH2 // UNIQUE-ID - GO:0019784 TYPES - GO:0019783 COMMON-NAME - NEDD8-specific protease activity // UNIQUE-ID - GO:0019785 TYPES - GO:0019783 COMMON-NAME - ISG15-specific protease activity // UNIQUE-ID - GO:0004186 TYPES - GO:0004185 COMMON-NAME - carboxypeptidase C activity SYNONYMS - carboxypeptidase Y activity SYNONYMS - cathepsin A activity SYNONYMS - deamidase SYNONYMS - lysosomal carboxypeptidase A SYNONYMS - lysosomal protective protein activity SYNONYMS - serine carboxypeptidase I activity SYNONYMS - serine-type carboxypeptidase I activity SYNONYMS - vacuolar carboxypeptidase Y // UNIQUE-ID - GO:0004188 TYPES - GO:0004185 TYPES - GO:0008322 COMMON-NAME - serine-type Pro-X carboxypeptidase activity SYNONYMS - aminoacylproline carboxypeptidase activity SYNONYMS - angiotensinase C activity SYNONYMS - lysosomal carboxypeptidase C activity SYNONYMS - lysosomal Pro-X carboxypeptidase activity SYNONYMS - lysosomal Pro-Xaa carboxypeptidase activity SYNONYMS - PCP SYNONYMS - peptidylprolylamino acid carboxypeptidase activity SYNONYMS - proline carboxypeptidase activity SYNONYMS - proline-specific carboxypeptidase P SYNONYMS - prolyl carboxypeptidase activity // UNIQUE-ID - GO:0004178 TYPES - GO:0004177 TYPES - GO:0008235 COMMON-NAME - leucyl aminopeptidase activity SYNONYMS - aminopeptidase II SYNONYMS - cathepsin III SYNONYMS - cytosol aminopeptidase activity SYNONYMS - FTBL proteins SYNONYMS - L-leucine aminopeptidase activity SYNONYMS - leucinamide aminopeptidase activity SYNONYMS - leucinaminopeptidase activity SYNONYMS - leucine aminopeptidase activity SYNONYMS - leucyl peptidase activity SYNONYMS - peptidase S activity SYNONYMS - proteinates FTBL // UNIQUE-ID - GO:0004179 TYPES - GO:0008235 TYPES - GO:0016284 COMMON-NAME - membrane alanyl aminopeptidase activity SYNONYMS - alanine-specific aminopeptidase activity SYNONYMS - alanyl aminopeptidase activity SYNONYMS - amino-oligopeptidase activity SYNONYMS - aminopeptidase M activity SYNONYMS - aminopeptidase N activity SYNONYMS - CD13 SYNONYMS - cysteinylglycinase activity SYNONYMS - cysteinylglycine dipeptidase activity SYNONYMS - L-alanine aminopeptidase activity SYNONYMS - membrane alanine aminopeptidase activity SYNONYMS - membrane aminopeptidase I activity SYNONYMS - microsomal aminopeptidase activity SYNONYMS - particle-bound aminopeptidase activity SYNONYMS - peptidase E activity SYNONYMS - pseudo leucine aminopeptidase activity // UNIQUE-ID - GO:0004181 TYPES - GO:0004180 TYPES - GO:0008235 COMMON-NAME - metallocarboxypeptidase activity // UNIQUE-ID - GO:0004230 TYPES - GO:0004177 TYPES - GO:0008235 COMMON-NAME - glutamyl aminopeptidase activity SYNONYMS - aminopeptidase A SYNONYMS - angiotensinase A SYNONYMS - angiotensinase A2 SYNONYMS - antigen BP-1/6C3 of mouse B lymphocytes SYNONYMS - aspartate aminopeptidase activity SYNONYMS - Ca2+-activated glutamate aminopeptidase activity SYNONYMS - glutamyl peptidase activity SYNONYMS - L-aspartate aminopeptidase activity SYNONYMS - membrane aminopeptidase II // UNIQUE-ID - GO:0004237 TYPES - GO:0008235 TYPES - GO:0016805 COMMON-NAME - membrane dipeptidase activity SYNONYMS - aminodipeptidase activity SYNONYMS - dehydropeptidase I (DPH I) SYNONYMS - dehydropeptidase I activity SYNONYMS - dipeptide hydrolase SYNONYMS - dipeptidyl hydrolase activity SYNONYMS - DPH I activity SYNONYMS - glycosyl-phosphatidylinositol-anchored renal dipeptidase activity SYNONYMS - MDP SYNONYMS - microsomal dipeptidase activity SYNONYMS - nonspecific dipeptidase activity SYNONYMS - renal dipeptidase activity // UNIQUE-ID - GO:0004239 TYPES - GO:0004177 TYPES - GO:0008235 COMMON-NAME - methionyl aminopeptidase activity SYNONYMS - L-methionine aminopeptidase activity SYNONYMS - MAP SYNONYMS - methionine aminopeptidase activity SYNONYMS - peptidase M activity // UNIQUE-ID - GO:0004250 TYPES - GO:0004177 TYPES - GO:0008235 COMMON-NAME - aminopeptidase I activity SYNONYMS - aminopeptidase III activity SYNONYMS - aminopeptidase yscI activity SYNONYMS - leucine aminopeptidase IV activity SYNONYMS - vacuolar aminopeptidase I activity SYNONYMS - yeast aminopeptidase I // UNIQUE-ID - GO:0008451 TYPES - GO:0004177 COMMON-NAME - X-Pro aminopeptidase activity SYNONYMS - aminoacylproline aminopeptidase activity SYNONYMS - aminopeptidase P SYNONYMS - proline aminopeptidase SYNONYMS - Xaa-Pro aminopeptidase activity // UNIQUE-ID - GO:0016284 TYPES - GO:0004177 COMMON-NAME - alanine aminopeptidase activity // UNIQUE-ID - GO:0016804 TYPES - GO:0004177 COMMON-NAME - prolyl aminopeptidase activity SYNONYMS - cytosol aminopeptidase V SYNONYMS - Pro-X aminopeptidase activity SYNONYMS - proline aminopeptidase SYNONYMS - proline iminopeptidase activity // UNIQUE-ID - GO:0030601 TYPES - GO:0004177 COMMON-NAME - aminopeptidase B activity SYNONYMS - arginyl aminopeptidase activity SYNONYMS - arylamidase II SYNONYMS - Cl--activated arginine aminopeptidase activity SYNONYMS - cytosol aminopeptidase IV SYNONYMS - L-arginine aminopeptidase activity // UNIQUE-ID - GO:0042576 TYPES - GO:0004177 COMMON-NAME - aspartyl aminopeptidase activity // UNIQUE-ID - GO:0045148 TYPES - GO:0004177 COMMON-NAME - tripeptide aminopeptidase activity SYNONYMS - alanine-phenylalanine-proline arylamidase activity SYNONYMS - aminoexotripeptidase activity SYNONYMS - aminotripeptidase activity SYNONYMS - imidoendopeptidase activity SYNONYMS - lymphopeptidase activity SYNONYMS - peptidase B SYNONYMS - peptidase T SYNONYMS - tripeptidase activity // UNIQUE-ID - GO:0008322 TYPES - GO:0004180 COMMON-NAME - Pro-X carboxypeptidase activity // UNIQUE-ID - GO:0008464 TYPES - GO:0008242 COMMON-NAME - gamma-glutamyl hydrolase activity SYNONYMS - carboxypeptidase G activity SYNONYMS - conjugase activity SYNONYMS - folate conjugase activity SYNONYMS - folic acid conjugase activity SYNONYMS - gamma-Glu-X carboxypeptidase activity SYNONYMS - lysosomal gamma-glutamyl carboxypeptidase activity SYNONYMS - poly(gamma-glutamic acid) endohydrolase activity SYNONYMS - poly(glutamic acid) hydrolase II SYNONYMS - polyglutamate hydrolase activity SYNONYMS - pteroyl-poly-alpha-glutamate hydrolase activity SYNONYMS - pteroyl-poly-gamma-glutamate hydrolase activity SYNONYMS - pteroylpoly-gamma-glutamyl hydrolase activity // UNIQUE-ID - GO:0016920 TYPES - GO:0008242 COMMON-NAME - pyroglutamyl-peptidase activity // UNIQUE-ID - GO:0017165 TYPES - GO:0016805 COMMON-NAME - dipeptidase E activity SYNONYMS - alpha-aspartyl dipeptidase activity SYNONYMS - aspartyl dipeptidase activity SYNONYMS - PepE gene product (Salmonella typhimurium) activity SYNONYMS - peptidase E activity // UNIQUE-ID - GO:0042315 TYPES - GO:0016805 COMMON-NAME - cytosol nonspecific dipeptidase activity COMMENT - Note that this function was formerly EC:3.4.3.1, EC:3.4.3.2, EC:3.4.3.6, EC:3.4.13.1, EC:3.4.13.2, EC:3.4.13.8, EC:3.4.13.11 and EC:3.4.13.15. SYNONYMS - cytosol non-specific dipeptidase activity SYNONYMS - diglycinase activity SYNONYMS - Gly-Leu hydrolase activity SYNONYMS - glycyl-glycine dipeptidase activity SYNONYMS - glycyl-L-leucine dipeptidase activity SYNONYMS - glycyl-L-leucine hydrolase activity SYNONYMS - glycyl-L-leucine peptidase activity SYNONYMS - glycyl-leucine dipeptidase activity SYNONYMS - glycylleucine dipeptide hydrolase activity SYNONYMS - glycylleucine hydrolase activity SYNONYMS - glycylleucine peptidase activity SYNONYMS - human cytosolic non-specific dipeptidase activity SYNONYMS - iminodipeptidase activity SYNONYMS - L-amino-acyl-L-amino-acid hydrolase activity SYNONYMS - L-prolylglycine dipeptidase activity SYNONYMS - N(2)-beta-alanylarginine dipeptidase activity SYNONYMS - N2-beta-alanylarginine dipeptidase activity SYNONYMS - non-specific dipeptidase activity SYNONYMS - peptidase A activity SYNONYMS - Pro-X dipeptidase activity SYNONYMS - prolinase activity SYNONYMS - prolyl dipeptidase activity SYNONYMS - prolylglycine dipeptidase activity // UNIQUE-ID - GO:0008239 TYPES - GO:0016806 COMMON-NAME - dipeptidyl-peptidase activity // UNIQUE-ID - GO:0016888 TYPES - GO:0004520 TYPES - GO:0016893 COMMON-NAME - endodeoxyribonuclease activity, producing 5'-phosphomonoesters SYNONYMS - endodeoxyribonuclease activity, producing 5' phosphomonoesters // UNIQUE-ID - GO:0016889 TYPES - GO:0004520 TYPES - GO:0016894 COMMON-NAME - endodeoxyribonuclease activity, producing 3'-phosphomonoesters SYNONYMS - endodeoxyribonuclease activity, producing other than 5'-phosphomonoesters // UNIQUE-ID - GO:0048256 TYPES - GO:0004520 COMMON-NAME - flap endonuclease activity // UNIQUE-ID - GO:0016891 TYPES - GO:0004521 TYPES - GO:0016893 COMMON-NAME - endoribonuclease activity, producing 5'-phosphomonoesters // UNIQUE-ID - GO:0016892 TYPES - GO:0004521 TYPES - GO:0016894 COMMON-NAME - endoribonuclease activity, producing 3'-phosphomonoesters SYNONYMS - endoribonuclease activity, producing other than 5'-phosphomonoesters // UNIQUE-ID - GO:0004526 TYPES - GO:0004549 TYPES - GO:0016891 COMMON-NAME - ribonuclease P activity SYNONYMS - RNase P // UNIQUE-ID - GO:0016895 TYPES - GO:0004529 TYPES - GO:0016796 COMMON-NAME - exodeoxyribonuclease activity, producing 5'-phosphomonoesters SYNONYMS - exodeoxyribonuclease activity, producing 5' phosphomonoesters // UNIQUE-ID - GO:0016896 TYPES - GO:0004532 TYPES - GO:0016796 COMMON-NAME - exoribonuclease activity, producing 5'-phosphomonoesters SYNONYMS - exoribonuclease activity, producing 5' phosphomonoesters // UNIQUE-ID - GO:0008859 TYPES - GO:0008408 TYPES - GO:0016896 COMMON-NAME - exoribonuclease II activity SYNONYMS - 5'-exoribonuclease activity SYNONYMS - BN ribonuclease activity SYNONYMS - Escherichia coli exo-RNase II SYNONYMS - ribonuclease II activity SYNONYMS - ribonuclease Q SYNONYMS - RNase II SYNONYMS - RNase II activity // UNIQUE-ID - GO:0008778 TYPES - GO:0016291 COMMON-NAME - acyl-CoA thioesterase II activity // UNIQUE-ID - GO:0016290 TYPES - GO:0016291 COMMON-NAME - palmitoyl-CoA hydrolase activity SYNONYMS - fatty acyl thioesterase I SYNONYMS - long-chain fatty-acyl-CoA hydrolase activity SYNONYMS - palmitoyl coenzyme A hydrolase activity SYNONYMS - palmitoyl thioesterase activity SYNONYMS - palmitoyl-CoA deacylase activity SYNONYMS - palmityl thioesterase activity SYNONYMS - palmityl thioesterase I SYNONYMS - palmityl-CoA deacylase activity // UNIQUE-ID - GO:0016292 TYPES - GO:0016291 COMMON-NAME - acyl-CoA thioesterase I activity // UNIQUE-ID - GO:0004114 TYPES - GO:0004112 COMMON-NAME - 3',5'-cyclic-nucleotide phosphodiesterase activity SYNONYMS - 3', 5'-cyclic nucleoside monophosphate phosphodiesterase activity SYNONYMS - 3',5' cyclic-nucleotide phosphodiesterase activity SYNONYMS - 3',5'-cyclic-nucleotide 5'-nucleotidohydrolase activity SYNONYMS - 3',5'-cyclonucleotide phosphodiesterase activity SYNONYMS - 3',5'-nucleotide phosphodiesterase activity SYNONYMS - 3': 5'-monophosphate phosphodiesterase (cyclic CMP) activity SYNONYMS - 3':5'-cyclic nucleotide 5'-nucleotidohydrolase activity SYNONYMS - cyclic 3',5'-mononucleotide phosphodiesterase activity SYNONYMS - cyclic 3',5'-nucleotide phosphodiesterase activity SYNONYMS - cyclic 3',5'-phosphodiesterase activity SYNONYMS - cyclic 3',5-nucleotide monophosphate phosphodiesterase activity SYNONYMS - cyclic AMP phosphodiesterase activity SYNONYMS - cyclic nucleotide phosphodiesterase activity SYNONYMS - cytidine 3':5'-monophosphate phosphodiesterase (cyclic CMP) activity SYNONYMS - nucleoside 3',5'-cyclic phosphate diesterase activity SYNONYMS - nucleoside-3',5-monophosphate phosphodiesterase activity SYNONYMS - PDE // UNIQUE-ID - GO:0001668 TYPES - GO:0004437 TYPES - GO:0042577 COMMON-NAME - phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity // UNIQUE-ID - GO:0004439 TYPES - GO:0004437 TYPES - GO:0042577 COMMON-NAME - phosphoinositide 5-phosphatase activity SYNONYMS - diphosphoinositide phosphatase activity SYNONYMS - inositol 1,4,5-triphosphate 5-phosphomonoesterase activity SYNONYMS - inositol triphosphate 5-phosphomonoesterase activity SYNONYMS - IP(3) phosphatase activity SYNONYMS - IP3 phosphatase activity SYNONYMS - phosphatidyl-inositol-bisphosphate phosphatase activity SYNONYMS - phosphatidyl-myo-inositol-4,5-bisphosphate 4-phosphohydrolase activity SYNONYMS - phosphatidyl-myo-inositol-4,5-bisphosphate phosphatase activity SYNONYMS - phosphatidylinositol 4,5-bisphosphate phosphatase activity SYNONYMS - phosphatidylinositol-bisphosphatase activity SYNONYMS - polyphosphoinositol lipid 5-phosphatase activity SYNONYMS - PtdIns(4,5)P(2) phosphatase activity SYNONYMS - PtdIns(4,5)P2 phosphatase activity SYNONYMS - triphosphoinositide phosphatase activity SYNONYMS - triphosphoinositide phosphomonoesterase activity SYNONYMS - type II inositol polyphosphate 5-phosphatase activity SYNONYMS - type II inositol-1,4,5-trisphosphate 5-phosphatase activity // UNIQUE-ID - GO:0004446 TYPES - GO:0004437 COMMON-NAME - multiple inositol-polyphosphate phosphatase activity SYNONYMS - 1D-myo-inositol-hexakisphosphate 5-phosphohydrolase activity SYNONYMS - inositol tetrakisphosphate phosphomonoesterase activity SYNONYMS - MIPP activity // UNIQUE-ID - GO:0008934 TYPES - GO:0004437 COMMON-NAME - inositol-1(or 4)-monophosphatase activity SYNONYMS - inositol 1-phosphatase activity SYNONYMS - inositol monophosphate phosphatase activity SYNONYMS - inositol phosphatase activity SYNONYMS - inositol-phosphate phosphatase activity SYNONYMS - L-myo-inositol-1-phosphate phosphatase activity SYNONYMS - myo-inositol 1-phosphatase activity SYNONYMS - myo-inositol monophosphatase activity SYNONYMS - myo-inositol-1(or 4)-monophosphatase activity SYNONYMS - myo-inositol-1(or 4)-phosphate phosphohydrolase activity SYNONYMS - myo-inositol-1-phosphatase activity SYNONYMS - myo-inositol-phosphate phosphohydrolase activity // UNIQUE-ID - GO:0016312 TYPES - GO:0004437 COMMON-NAME - inositol bisphosphate phosphatase activity // UNIQUE-ID - GO:0016314 TYPES - GO:0004437 TYPES - GO:0042577 COMMON-NAME - phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase activity SYNONYMS - 1-phosphatidyl-1D-myo-inositol-3,4,5-trisphosphate 3-phosphohydrolase activity SYNONYMS - MMAC1 SYNONYMS - phosphatidylinositol-3,4,5-trisphosphate 3-phosphohydrolase activity // UNIQUE-ID - GO:0016316 TYPES - GO:0004437 TYPES - GO:0042577 COMMON-NAME - phosphatidylinositol-3,4-bisphosphate 4-phosphatase activity SYNONYMS - 1-phosphatidyl-1D-myo-inositol-3,4-bisphosphate 4-phosphohydrolase activity SYNONYMS - D-myo-inositol-3,4-bisphosphate 4-phosphohydrolase activity SYNONYMS - inositol polyphosphate 4-phosphatase activity SYNONYMS - inositol polyphosphate 4-phosphatase type II activity SYNONYMS - inositol-1,4,-bisphosphate 4-phosphatase activity SYNONYMS - inositol-3,4-bisphosphate 4-phosphatase activity SYNONYMS - phosphoinositide 4-phosphatase activity // UNIQUE-ID - GO:0046030 TYPES - GO:0004437 COMMON-NAME - inositol trisphosphate phosphatase activity SYNONYMS - inositol-1,4,5-trisphosphate phosphatase // UNIQUE-ID - GO:0004722 TYPES - GO:0004721 COMMON-NAME - protein serine/threonine phosphatase activity SYNONYMS - 3-hydroxy 3-methylglutaryl coenzymeA reductase phosphatase SYNONYMS - Aspergillus awamori acid protein phosphatase SYNONYMS - BCKDH phosphatase SYNONYMS - branched-chain alpha-keto acid dehydrogenase phosphatase SYNONYMS - casein phosphatase SYNONYMS - HMG-CoA reductase phosphatase SYNONYMS - phosphatase 2A SYNONYMS - phosphatase 2B SYNONYMS - phosphatase C-II SYNONYMS - phosphatase H-II SYNONYMS - phosphatase I SYNONYMS - phosphatase IB SYNONYMS - phosphatase II SYNONYMS - phosphatase III SYNONYMS - phosphatase IV SYNONYMS - phosphatase SP SYNONYMS - phosphopyruvate dehydrogenase phosphatase SYNONYMS - phosphospectrin phosphatase SYNONYMS - polycation modulated (PCM-) phosphatase SYNONYMS - protein D phosphatase SYNONYMS - serine/threonine specific protein phosphatase activity // UNIQUE-ID - GO:0004725 TYPES - GO:0004721 COMMON-NAME - protein tyrosine phosphatase activity SYNONYMS - [phosphotyrosine]protein phosphatase activity SYNONYMS - phosphoprotein phosphatase (phosphotyrosine) activity SYNONYMS - phosphotyrosine histone phosphatase activity SYNONYMS - phosphotyrosine phosphatase activity SYNONYMS - phosphotyrosine protein phosphatase activity SYNONYMS - phosphotyrosylprotein phosphatase activity SYNONYMS - PPT-phosphatase activity SYNONYMS - protein phosphotyrosine phosphatase activity SYNONYMS - protein-tyrosine-phosphatase activity SYNONYMS - protein-tyrosine-phosphate phosphohydrolase activity SYNONYMS - PTP-phosphatase activity SYNONYMS - PTPase activity SYNONYMS - tyrosine O-phosphate phosphatase activity SYNONYMS - tyrosylprotein phosphatase activity // UNIQUE-ID - GO:0008138 TYPES - GO:0004721 COMMON-NAME - protein tyrosine/serine/threonine phosphatase activity SYNONYMS - dual-specificity protein phosphatase // UNIQUE-ID - GO:0008330 TYPES - GO:0004721 COMMON-NAME - protein tyrosine/threonine phosphatase activity // UNIQUE-ID - GO:0033549 TYPES - GO:0004721 COMMON-NAME - MAP kinase phosphatase activity // UNIQUE-ID - GO:0008253 TYPES - GO:0008252 COMMON-NAME - 5'-nucleotidase activity SYNONYMS - 5' nucleotidase activity SYNONYMS - 5'-adenylic phosphatase SYNONYMS - 5'-AMP nucleotidase SYNONYMS - 5'-AMPase SYNONYMS - 5'-mononucleotidase activity SYNONYMS - 5'-ribonucleotide phosphohydrolase activity SYNONYMS - adenosine 5'-phosphatase SYNONYMS - adenosine monophosphatase SYNONYMS - AMP phosphatase SYNONYMS - AMP phosphohydrolase SYNONYMS - AMPase SYNONYMS - snake venom 5'-nucleotidase SYNONYMS - thimidine monophosphate nucleotidase SYNONYMS - UMPase SYNONYMS - uridine 5'-nucleotidase // UNIQUE-ID - GO:0004331 TYPES - GO:0019203 COMMON-NAME - fructose-2,6-bisphosphate 2-phosphatase activity SYNONYMS - beta-D-fructose-2,6-bisphosphate 2-phosphohydrolase activity SYNONYMS - D-fructose-2,6-bisphosphate 2-phosphohydrolase activity SYNONYMS - fructose-2,6-bisphosphatase activity // UNIQUE-ID - GO:0042132 TYPES - GO:0019203 COMMON-NAME - fructose 1,6-bisphosphate 1-phosphatase activity SYNONYMS - D-fructose 1,6-diphosphatase activity SYNONYMS - D-fructose-1,6-bisphosphate 1-phosphohydrolase activity SYNONYMS - D-fructose-1,6-bisphosphate phosphatase activity SYNONYMS - FBPase activity SYNONYMS - fructose 1,6-bisphosphatase activity SYNONYMS - fructose 1,6-bisphosphate 1-phosphatase activity SYNONYMS - fructose 1,6-bisphosphate phosphatase activity SYNONYMS - fructose 1,6-diphosphatase activity SYNONYMS - fructose 1,6-diphosphate phosphatase activity SYNONYMS - fructose bisphosphate phosphatase activity SYNONYMS - fructose diphosphatase activity SYNONYMS - fructose diphosphate phosphatase activity SYNONYMS - fructose-1,6-bisphosphatase activity SYNONYMS - hexose bisphosphatase activity SYNONYMS - hexose diphosphatase activity SYNONYMS - hexosediphosphatase activity // UNIQUE-ID - GO:0004651 TYPES - GO:0019204 COMMON-NAME - polynucleotide 5'-phosphatase activity SYNONYMS - 5'-polynucleotidase activity SYNONYMS - polynucleotide 5'-phosphohydrolase activity SYNONYMS - polynucleotide 5'-triphosphatase activity // UNIQUE-ID - GO:0046403 TYPES - GO:0019204 COMMON-NAME - polynucleotide 3'-phosphatase activity COMMENT - Consider also annotating to the molecular function term 'damaged DNA binding ; GO:0003684'. SYNONYMS - 2'(3')-polynucleotidase activity SYNONYMS - 5'-polynucleotidekinase 3'-phosphatase activity SYNONYMS - deoxyribonucleate 3'-phosphatase activity SYNONYMS - DNA 3'-phosphatase activity SYNONYMS - polynucleotide 3'-phosphohydrolase activity // UNIQUE-ID - GO:0004572 TYPES - GO:0015924 COMMON-NAME - mannosyl-oligosaccharide 1,3-1,6-alpha-mannosidase activity SYNONYMS - 1,3-(1,6-)mannosyl-oligosaccharide alpha-D-mannohydrolase activity SYNONYMS - alpha-D-mannosidase II SYNONYMS - alpha-mannosidase II SYNONYMS - alpha1-3,6-mannosidase activity SYNONYMS - exo-1,3-1,6-alpha-mannosidase activity SYNONYMS - GlcNAc transferase I-dependent alpha1,3[alpha1,6]mannosidase activity SYNONYMS - golgi alpha-mannosidase II SYNONYMS - ManII activity SYNONYMS - mannosidase II activity // UNIQUE-ID - GO:0003934 TYPES - GO:0003933 COMMON-NAME - GTP cyclohydrolase I activity SYNONYMS - dihydroneopterin triphosphate synthase activity SYNONYMS - GTP 7,8-8,9-dihydrolase activity SYNONYMS - GTP 8-formylhydrolase activity SYNONYMS - guanosine triphosphate 8-deformylase activity SYNONYMS - guanosine triphosphate cyclohydrolase activity // UNIQUE-ID - GO:0008796 TYPES - GO:0004551 COMMON-NAME - bis(5'-nucleosyl)-tetraphosphatase activity // UNIQUE-ID - GO:0047710 TYPES - GO:0004551 COMMON-NAME - bis(5'-adenosyl)-triphosphatase activity SYNONYMS - 1-P,3-P-bis(5'-adenosyl)-triphosphate adenylohydrolase activity SYNONYMS - AP(3)A hydrolase activity SYNONYMS - AP(3)Aase activity SYNONYMS - AP3A hydrolase activity SYNONYMS - AP3Aase activity SYNONYMS - diadenosine 5',5'''-P(1),P(3)-triphosphate hydrolase activity SYNONYMS - diadenosine 5',5'''-P1,P3-triphosphate hydrolase activity SYNONYMS - diadenosine 5,5-P1,P3-triphosphatase activity SYNONYMS - dinucleosidetriphosphatase activity SYNONYMS - P1,P3-bis(5'-adenosyl)-triphosphate adenylohydrolase activity // UNIQUE-ID - GO:0045134 TYPES - GO:0017110 COMMON-NAME - uridine-diphosphatase activity SYNONYMS - UDPase activity SYNONYMS - uridine 5'-diphosphatase activity SYNONYMS - uridine diphosphatase activity // UNIQUE-ID - GO:0003924 TYPES - GO:0017111 COMMON-NAME - GTPase activity COMMENT - Consider also annotating to the molecular function term 'GTP binding ; GO:0005525'. SYNONYMS - ARF small monomeric GTPase activity SYNONYMS - dynamin GTPase activity SYNONYMS - heterotrimeric G-protein GTPase activity SYNONYMS - heterotrimeric G-protein GTPase, alpha-subunit SYNONYMS - heterotrimeric G-protein GTPase, beta-subunit SYNONYMS - heterotrimeric G-protein GTPase, gamma-subunit SYNONYMS - hydrolase activity, acting on acid anhydrides, acting on GTP, involved in cellular and subcellular movement SYNONYMS - protein-synthesizing GTPase activity SYNONYMS - protein-synthesizing GTPase activity, elongation SYNONYMS - protein-synthesizing GTPase activity, initiation SYNONYMS - protein-synthesizing GTPase activity, termination SYNONYMS - Rab small monomeric GTPase activity SYNONYMS - Ran small monomeric GTPase activity SYNONYMS - Ras small monomeric GTPase activity SYNONYMS - RHEB small monomeric GTPase activity SYNONYMS - Rho small monomeric GTPase activity SYNONYMS - Sar small monomeric GTPase activity SYNONYMS - signal-recognition-particle GTPase activity SYNONYMS - small monomeric GTPase activity SYNONYMS - tubulin GTPase activity // UNIQUE-ID - GO:0004386 TYPES - GO:0017111 COMMON-NAME - helicase activity COMMENT - Note that most helicases catalyze processive duplex unwinding. // UNIQUE-ID - GO:0008413 TYPES - GO:0017111 COMMON-NAME - 8-oxo-7,8-dihydroguanine triphosphatase activity SYNONYMS - 7,8-dihydro-8-oxoguanine-triphosphatase activity SYNONYMS - 8-oxo-GTPase activity // UNIQUE-ID - GO:0016887 TYPES - GO:0017111 COMMON-NAME - ATPase activity COMMENT - Consider also annotating to the molecular function term 'ATP binding ; GO:0005524'. SYNONYMS - (Ca2+ + Mg2+)-ATPase SYNONYMS - adenosine 5'-triphosphatase activity SYNONYMS - adenosine triphosphatase activity SYNONYMS - adenosinetriphosphatase activity SYNONYMS - ATP hydrolase activity SYNONYMS - ATP monophosphatase activity SYNONYMS - ATP phosphohydrolase activity SYNONYMS - complex V (mitochondrial electron transport) SYNONYMS - HCO3--ATPase SYNONYMS - SV40 T-antigen // UNIQUE-ID - GO:0050333 TYPES - GO:0017111 COMMON-NAME - thiamin-triphosphatase activity SYNONYMS - thiamine-triphosphatase activity SYNONYMS - thiamine-triphosphate phosphohydrolase activity SYNONYMS - ThTPase activity // UNIQUE-ID - GO:0005388 TYPES - GO:0015085 TYPES - GO:0015662 TYPES - GO:0019829 COMMON-NAME - calcium-transporting ATPase activity COMMENT - Consider also annotating to the molecular function term 'ATP binding ; GO:0005524'. SYNONYMS - ATP phosphohydrolase (Ca2+-transporting) SYNONYMS - Ca(2+)-transporting ATPase activity SYNONYMS - Ca2+-pumping ATPase activity SYNONYMS - Ca2+-transporting ATPase activity SYNONYMS - calcium ABC transporter SYNONYMS - calcium efflux ATPase SYNONYMS - calcium pump SYNONYMS - calcium transporting ATPase activity SYNONYMS - calcium-translocating P-type ATPase activity SYNONYMS - plasma membrane Ca-ATPase SYNONYMS - sarco(endo)plasmic reticulum Ca2+-ATPase SYNONYMS - sarcoplasmic reticulum ATPase // UNIQUE-ID - GO:0005391 TYPES - GO:0015662 COMMON-NAME - sodium:potassium-exchanging ATPase activity COMMENT - Consider also annotating to the molecular function term 'ATP binding ; GO:0005524'. SYNONYMS - (Na+ + K+)-activated ATPase activity SYNONYMS - (Na+ + K+)-ATPase activity SYNONYMS - ATP phosphohydrolase (Na+/K+-exchanging) SYNONYMS - Na(+)/K(+)-ATPase activity SYNONYMS - Na(+)/K(+)-exchanging ATPase activity SYNONYMS - Na+,K+ pump SYNONYMS - Na+,K+-ATPase activity SYNONYMS - Na+/K+-ATPase activity SYNONYMS - Na+/K+-exchanging ATPase activity SYNONYMS - na+/K+-exchanging ATPase activity SYNONYMS - Na,K-activated ATPase activity SYNONYMS - Na,K-pump SYNONYMS - sodium pump SYNONYMS - sodium/potassium-exchanging ATPase activity SYNONYMS - sodium/potassium-transporting ATPase activity SYNONYMS - sodium:potassium exchanging ATPase activity // UNIQUE-ID - GO:0008553 TYPES - GO:0015078 TYPES - GO:0015662 COMMON-NAME - hydrogen-exporting ATPase activity, phosphorylative mechanism COMMENT - Consider also annotating to the molecular function term 'ATP binding ; GO:0005524'. SYNONYMS - ATP phosphohydrolase (H+-exporting) SYNONYMS - H(+)-exporting ATPase activity SYNONYMS - H(+)-transporting ATPase activity SYNONYMS - H+-exporting ATPase activity SYNONYMS - H+-transporting ATPase SYNONYMS - hydrogen exporting ATPase activity, phosphorylative mechanism SYNONYMS - hydrogen-/sodium-translocating ATPase activity SYNONYMS - proton transport ATPase activity SYNONYMS - proton-exporting ATPase SYNONYMS - proton-translocating ATPase activity SYNONYMS - proton-translocating P-type ATPase activity SYNONYMS - yeast plasma membrane ATPase SYNONYMS - yeast plasma membrane H+-ATPase // UNIQUE-ID - GO:0008900 TYPES - GO:0015078 TYPES - GO:0015662 COMMON-NAME - hydrogen:potassium-exchanging ATPase activity COMMENT - Consider also annotating to the molecular function term 'ATP binding ; GO:0005524'. SYNONYMS - (K+ + H+)-ATPase activity SYNONYMS - ATP phosphohydrolase (H+/K+-exchanging) SYNONYMS - gastric H(+)/K(+) ATPase activity SYNONYMS - gastric H+/K+ ATPase SYNONYMS - H(+)/K(+)-ATPase activity SYNONYMS - H(+)/K(+)-exchanging ATPase activity SYNONYMS - H+-K+-ATPase activity SYNONYMS - H+/K+-ATPase activity SYNONYMS - H+/K+-exchanging ATPase activity SYNONYMS - h+/K+-exchanging ATPase activity SYNONYMS - H,K-ATPase activity SYNONYMS - hydrogen/potassium-exchanging ATPase activity SYNONYMS - hydrogen:potassium exchanging ATPase activity SYNONYMS - proton pump activity // UNIQUE-ID - GO:0043682 TYPES - GO:0015662 COMMON-NAME - copper-transporting ATPase activity // UNIQUE-ID - GO:0046961 TYPES - GO:0015078 TYPES - GO:0019829 COMMON-NAME - proton-transporting ATPase activity, rotational mechanism COMMENT - Consider also annotating to the molecular function term 'ATP binding ; GO:0005524'. SYNONYMS - ATP phosphohydrolase (H+-transporting) activity SYNONYMS - ATP synthase activity SYNONYMS - bacterial Ca2+/Mg2+ ATPase SYNONYMS - chloroplast ATPase activity SYNONYMS - coupling factors (Fo, F1 and CF1) SYNONYMS - F(0)F(1)-ATPase activity SYNONYMS - F(1)-ATPase activity SYNONYMS - F(o)F(1)-ATPase activity SYNONYMS - F0F1-ATPase SYNONYMS - F1-ATPase SYNONYMS - FoF1-ATPase SYNONYMS - H(+)-transporting ATP synthase activity SYNONYMS - H(+)-transporting ATPase activity SYNONYMS - H+-transporting ATPase activity SYNONYMS - H+-transporting two-sector ATPase SYNONYMS - hydrogen ion translocating A-type ATPase activity SYNONYMS - hydrogen ion translocating F-type ATPase activity SYNONYMS - hydrogen ion translocating V-type ATPase activity SYNONYMS - hydrogen ion transporting two-sector ATPase activity SYNONYMS - mitochondrial ATPase activity SYNONYMS - proton-transporting ATPase activity, rotational mechanism // UNIQUE-ID - GO:0047631 TYPES - GO:0019144 COMMON-NAME - ADP-ribose diphosphatase activity SYNONYMS - adenosine diphosphoribose pyrophosphatase activity SYNONYMS - ADP-ribose phosphohydrolase activity SYNONYMS - ADP-ribose pyrophosphatase activity SYNONYMS - ADP-ribose ribophosphohydrolase activity SYNONYMS - ADPR-PPase activity SYNONYMS - ADPribose diphosphatase activity SYNONYMS - ADPribose pyrophosphatase activity // UNIQUE-ID - GO:0004170 TYPES - GO:0047429 COMMON-NAME - dUTP diphosphatase activity SYNONYMS - deoxyuridine-triphosphatase activity SYNONYMS - desoxyuridine 5'-triphosphatase activity SYNONYMS - desoxyuridine 5'-triphosphate nucleotidohydrolase activity SYNONYMS - dUTP nucleotidohydrolase activity SYNONYMS - dUTP pyrophosphatase activity SYNONYMS - dUTPase activity // UNIQUE-ID - GO:0008308 TYPES - GO:0005244 TYPES - GO:0005253 COMMON-NAME - voltage-gated anion channel activity SYNONYMS - voltage-dependent ion-selective channel activity SYNONYMS - voltage-gated ion-selective channel activity // UNIQUE-ID - GO:0022843 TYPES - GO:0005244 COMMON-NAME - voltage-gated cation channel activity // UNIQUE-ID - GO:0005217 TYPES - GO:0015276 COMMON-NAME - intracellular ligand-gated ion channel activity // UNIQUE-ID - GO:0005230 TYPES - GO:0015276 COMMON-NAME - extracellular ligand-gated ion channel activity // UNIQUE-ID - GO:0015278 TYPES - GO:0005262 TYPES - GO:0015276 COMMON-NAME - calcium-release channel activity // UNIQUE-ID - GO:0015279 TYPES - GO:0005262 TYPES - GO:0015276 COMMON-NAME - store-operated calcium channel activity // UNIQUE-ID - GO:0015280 TYPES - GO:0005272 TYPES - GO:0015276 COMMON-NAME - amiloride-sensitive sodium channel activity SYNONYMS - epithelial sodium channel // UNIQUE-ID - GO:0043855 TYPES - GO:0015276 COMMON-NAME - cyclic nucleotide-gated ion channel activity SYNONYMS - cyclic nucleotide activated ion channel activity SYNONYMS - cyclic nucleotide gated ion channel activity SYNONYMS - cyclic nucleotide-activated ion channel activity // UNIQUE-ID - GO:0005221 TYPES - GO:0005217 TYPES - GO:0005261 TYPES - GO:0043855 COMMON-NAME - intracellular cyclic nucleotide activated cation channel activity // UNIQUE-ID - GO:0004889 TYPES - GO:0005231 TYPES - GO:0005261 COMMON-NAME - nicotinic acetylcholine-activated cation-selective channel activity // UNIQUE-ID - GO:0004931 TYPES - GO:0005231 TYPES - GO:0005261 COMMON-NAME - ATP-gated cation channel activity COMMENT - Note that this term refers to an activity and not a gene product. Consider also annotating to the molecular function term 'purinergic nucleotide receptor activity ; GO:0001614'. SYNONYMS - P2X activity SYNONYMS - purinoreceptor // UNIQUE-ID - GO:0005232 TYPES - GO:0005231 TYPES - GO:0005261 COMMON-NAME - serotonin-activated cation-selective channel activity COMMENT - Note that this term represents an activity and not a gene product. Consider also annotating to the molecular function term 'serotonin receptor activity ; GO:0004993'. SYNONYMS - 5-hydroxytryptamine-gated receptor-channel // UNIQUE-ID - GO:0015269 TYPES - GO:0005227 TYPES - GO:0005267 TYPES - GO:0022839 COMMON-NAME - calcium-activated potassium channel activity // UNIQUE-ID - GO:0005254 TYPES - GO:0005253 COMMON-NAME - chloride channel activity // UNIQUE-ID - GO:0005227 TYPES - GO:0005261 COMMON-NAME - calcium activated cation channel activity SYNONYMS - intracellular calcium-activated potassium channel SYNONYMS - polycystin // UNIQUE-ID - GO:0005262 TYPES - GO:0005261 COMMON-NAME - calcium channel activity // UNIQUE-ID - GO:0005267 TYPES - GO:0005261 COMMON-NAME - potassium channel activity // UNIQUE-ID - GO:0005272 TYPES - GO:0005261 COMMON-NAME - sodium channel activity // UNIQUE-ID - GO:0015495 TYPES - GO:0005280 TYPES - GO:0015185 TYPES - GO:0015370 COMMON-NAME - gamma-aminobutyric acid:hydrogen symporter activity COMMENT - See also the molecular function term 'neurotransmitter transporter activity ; GO:0005326'. SYNONYMS - 4-aminobutanoate:hydrogen symporter activity SYNONYMS - 4-aminobutanoate:proton symporter activty SYNONYMS - 4-aminobutyrate:hydrogen symporter activity SYNONYMS - 4-aminobutyrate:proton symporter activity SYNONYMS - GABA:hydrogen symporter activity SYNONYMS - GABA:proton symporter activity SYNONYMS - gamma-aminobutyric acid permease activity SYNONYMS - gamma-aminobutyric acid:proton symporter // UNIQUE-ID - GO:0005332 TYPES - GO:0005283 TYPES - GO:0015185 COMMON-NAME - gamma-aminobutyric acid:sodium symporter activity COMMENT - See also the molecular function term 'neurotransmitter:sodium symporter activity ; GO:0005328'. SYNONYMS - 4-aminobutanoate:sodium symporter activity SYNONYMS - 4-aminobutyrate:sodium symporter activity SYNONYMS - betaine/GABA:sodium symporter activity SYNONYMS - GABA:sodium symporter activity SYNONYMS - sodium/chloride-dependent GABA transporter // UNIQUE-ID - GO:0015501 TYPES - GO:0005283 TYPES - GO:0005313 COMMON-NAME - glutamate:sodium symporter activity SYNONYMS - sodium/excitatory glutamate cotransporter activity SYNONYMS - sodium/excitatory glutamate symporter activity // UNIQUE-ID - GO:0015284 TYPES - GO:0005353 TYPES - GO:0008516 COMMON-NAME - fructose uniporter activity // UNIQUE-ID - GO:0005402 TYPES - GO:0015294 COMMON-NAME - cation:sugar symporter activity SYNONYMS - cation/sugar symporter // UNIQUE-ID - GO:0015295 TYPES - GO:0015294 COMMON-NAME - solute:hydrogen symporter activity SYNONYMS - heavy metal ion:hydrogen symporter activity SYNONYMS - high affinity metal ion uptake transporter activity SYNONYMS - L-idonate/D-gluconate:hydrogen symporter activity SYNONYMS - low affinity metal ion uptake transporter activity SYNONYMS - proline/glycine/betaine:hydrogen/sodium symporter activity SYNONYMS - solute:proton symporter // UNIQUE-ID - GO:0015370 TYPES - GO:0015294 COMMON-NAME - solute:sodium symporter activity SYNONYMS - proline/glycine/betaine:hydrogen/sodium symporter activity // UNIQUE-ID - GO:0008510 TYPES - GO:0015106 TYPES - GO:0015296 COMMON-NAME - sodium:bicarbonate symporter activity SYNONYMS - sodium/bicarbonate cotransporter SYNONYMS - sodium:bicarbonate cotransporter activity // UNIQUE-ID - GO:0015373 TYPES - GO:0015296 TYPES - GO:0015370 COMMON-NAME - monovalent anion:sodium symporter activity // UNIQUE-ID - GO:0015377 TYPES - GO:0015296 COMMON-NAME - cation:chloride symporter activity SYNONYMS - cation:chloride cotransporter activity // UNIQUE-ID - GO:0015362 TYPES - GO:0017153 COMMON-NAME - high affinity sodium:dicarboxylate symporter activity SYNONYMS - high affinity sodium:dicarboxylate cotransporter activity // UNIQUE-ID - GO:0015389 TYPES - GO:0005345 TYPES - GO:0005350 TYPES - GO:0005415 COMMON-NAME - pyrimidine- and adenine-specific:sodium symporter activity // UNIQUE-ID - GO:0015390 TYPES - GO:0005415 COMMON-NAME - purine-specific nucleoside:sodium symporter activity // UNIQUE-ID - GO:0005471 TYPES - GO:0015300 COMMON-NAME - ATP:ADP antiporter activity SYNONYMS - adenine nucleotide translocase SYNONYMS - ADP/ATP translocase SYNONYMS - ATP/ADP exchange SYNONYMS - ATP/ADP exchanger // UNIQUE-ID - GO:0015299 TYPES - GO:0015298 COMMON-NAME - solute:hydrogen antiporter activity SYNONYMS - L-arabinose/beta-D-thiogalactopyranoside:hydrogen antiporter activity SYNONYMS - solute:proton antiporter // UNIQUE-ID - GO:0015491 TYPES - GO:0015298 COMMON-NAME - cation:cation antiporter activity // UNIQUE-ID - GO:0015380 TYPES - GO:0015106 TYPES - GO:0015108 TYPES - GO:0015301 COMMON-NAME - anion exchanger activity SYNONYMS - bicarbonate:chloride antiporter // UNIQUE-ID - GO:0015141 TYPES - GO:0005310 COMMON-NAME - succinate transmembrane transporter activity SYNONYMS - dicarboxylate (succinate/fumarate/malate) antiporter activity // UNIQUE-ID - GO:0019531 TYPES - GO:0005310 COMMON-NAME - oxalate transmembrane transporter activity SYNONYMS - oxalic acid transporter // UNIQUE-ID - GO:0015125 TYPES - GO:0008028 COMMON-NAME - bile acid transmembrane transporter activity // UNIQUE-ID - GO:0015132 TYPES - GO:0008028 COMMON-NAME - prostaglandin transmembrane transporter activity SYNONYMS - prostaglandin/thromboxane transporter activity // UNIQUE-ID - GO:0015499 TYPES - GO:0008028 COMMON-NAME - formate transmembrane transporter activity // UNIQUE-ID - GO:0015137 TYPES - GO:0015142 COMMON-NAME - citrate transmembrane transporter activity // UNIQUE-ID - GO:0015172 TYPES - GO:0015171 COMMON-NAME - acidic amino acid transmembrane transporter activity SYNONYMS - acidic amino acid transporter activity // UNIQUE-ID - GO:0015173 TYPES - GO:0015171 COMMON-NAME - aromatic amino acid transmembrane transporter activity SYNONYMS - aromatic amino acid transporter activity SYNONYMS - hydroxy/aromatic amino acid permease activity SYNONYMS - valine/tyrosine/tryptophan permease activity // UNIQUE-ID - GO:0015174 TYPES - GO:0015171 COMMON-NAME - basic amino acid transmembrane transporter activity SYNONYMS - basic amino acid permease activity SYNONYMS - basic amino acid transporter activity // UNIQUE-ID - GO:0015175 TYPES - GO:0015171 COMMON-NAME - neutral amino acid transmembrane transporter activity SYNONYMS - neutral amino acid transporter activity // UNIQUE-ID - GO:0015179 TYPES - GO:0015171 COMMON-NAME - L-amino acid transmembrane transporter activity SYNONYMS - L-amino acid transporter activity // UNIQUE-ID - GO:0022858 TYPES - GO:0015171 COMMON-NAME - alanine transmembrane transporter activity // UNIQUE-ID - GO:0015077 TYPES - GO:0022890 COMMON-NAME - monovalent inorganic cation transmembrane transporter activity SYNONYMS - univalent inorganic cation transporter // UNIQUE-ID - GO:0015082 TYPES - GO:0022890 COMMON-NAME - di-, tri-valent inorganic cation transmembrane transporter activity // UNIQUE-ID - GO:0015085 TYPES - GO:0015082 TYPES - GO:0046873 COMMON-NAME - calcium ion transmembrane transporter activity // UNIQUE-ID - GO:0046915 TYPES - GO:0046873 COMMON-NAME - transition metal ion transmembrane transporter activity // UNIQUE-ID - GO:0015105 TYPES - GO:0015103 COMMON-NAME - arsenite transmembrane transporter activity // UNIQUE-ID - GO:0015106 TYPES - GO:0015103 COMMON-NAME - bicarbonate transmembrane transporter activity // UNIQUE-ID - GO:0015108 TYPES - GO:0015103 COMMON-NAME - chloride transmembrane transporter activity // UNIQUE-ID - GO:0015111 TYPES - GO:0015103 COMMON-NAME - iodide transmembrane transporter activity // UNIQUE-ID - GO:0015114 TYPES - GO:0015103 COMMON-NAME - phosphate transmembrane transporter activity // UNIQUE-ID - GO:0015116 TYPES - GO:0015103 COMMON-NAME - sulfate transmembrane transporter activity SYNONYMS - sulfate permease activity SYNONYMS - sulphate transporter activity // UNIQUE-ID - GO:0005459 TYPES - GO:0015165 COMMON-NAME - UDP-galactose transmembrane transporter activity // UNIQUE-ID - GO:0015149 TYPES - GO:0015145 COMMON-NAME - hexose transmembrane transporter activity // UNIQUE-ID - GO:0031727 TYPES - GO:0048020 COMMON-NAME - CCR2 chemokine receptor binding SYNONYMS - CCR2 chemokine receptor ligand SYNONYMS - monocyte chemoattractant protein 1 receptor binding // UNIQUE-ID - GO:0035259 TYPES - GO:0035258 COMMON-NAME - glucocorticoid receptor binding // UNIQUE-ID - GO:0050681 TYPES - GO:0035258 COMMON-NAME - androgen receptor binding SYNONYMS - AR binding // UNIQUE-ID - GO:0008536 TYPES - GO:0017016 COMMON-NAME - Ran GTPase binding SYNONYMS - Ran protein binding SYNONYMS - Ran-binding protein // UNIQUE-ID - GO:0017048 TYPES - GO:0017016 COMMON-NAME - Rho GTPase binding SYNONYMS - Rho interactor activity SYNONYMS - Rhophilin // UNIQUE-ID - GO:0017137 TYPES - GO:0017016 COMMON-NAME - Rab GTPase binding SYNONYMS - Rab interactor activity // UNIQUE-ID - GO:0017160 TYPES - GO:0017016 COMMON-NAME - Ral GTPase binding SYNONYMS - Ral interactor activity // UNIQUE-ID - GO:0008199 TYPES - GO:0005506 COMMON-NAME - ferric iron binding // UNIQUE-ID - GO:0001636 TYPES - GO:0001633 COMMON-NAME - corticotrophin-releasing factor gastric inhibitory peptide-like receptor activity // UNIQUE-ID - GO:0004948 TYPES - GO:0001633 COMMON-NAME - calcitonin receptor activity // UNIQUE-ID - GO:0004967 TYPES - GO:0001633 COMMON-NAME - glucagon receptor activity // UNIQUE-ID - GO:0004991 TYPES - GO:0001633 COMMON-NAME - parathyroid hormone receptor activity // UNIQUE-ID - GO:0004999 TYPES - GO:0001633 COMMON-NAME - vasoactive intestinal polypeptide receptor activity // UNIQUE-ID - GO:0015055 TYPES - GO:0001633 COMMON-NAME - secretin receptor activity // UNIQUE-ID - GO:0015058 TYPES - GO:0001633 COMMON-NAME - epidermal growth factor-like module containing hormone receptor activity SYNONYMS - EGF-like module containing hormone receptor activity SYNONYMS - Egr1 hormone receptor // UNIQUE-ID - GO:0016520 TYPES - GO:0001633 COMMON-NAME - growth hormone-releasing hormone receptor activity // UNIQUE-ID - GO:0016527 TYPES - GO:0001633 COMMON-NAME - brain-specific angiogenesis inhibitor activity // UNIQUE-ID - GO:0004972 TYPES - GO:0004970 COMMON-NAME - N-methyl-D-aspartate selective glutamate receptor activity COMMENT - Note that this term represents an activity and not a gene product. Consider also annotating to the molecular function terms 'inotropic glutamate receptor activity ; GO:0004970' and 'cation channel activity ; GO:0005261'. SYNONYMS - NMDA receptor // UNIQUE-ID - GO:0015277 TYPES - GO:0004970 COMMON-NAME - kainate selective glutamate receptor activity COMMENT - Note that this term represents an activity and not a gene product. Consider also annotating to the molecular function terms 'inotropic glutamate receptor activity ; GO:0004970' and 'cation channel activity ; GO:0005261'. // UNIQUE-ID - GO:0008033 TYPES - GO:0006399 TYPES - GO:0034470 COMMON-NAME - tRNA processing // UNIQUE-ID - GO:0006418 TYPES - GO:0043039 COMMON-NAME - tRNA aminoacylation for protein translation SYNONYMS - tRNA charging // UNIQUE-ID - GO:0042455 TYPES - GO:0009119 TYPES - GO:0009163 COMMON-NAME - ribonucleoside biosynthetic process // UNIQUE-ID - GO:0009123 TYPES - GO:0009117 COMMON-NAME - nucleoside monophosphate metabolic process // UNIQUE-ID - GO:0009259 TYPES - GO:0009117 COMMON-NAME - ribonucleotide metabolic process // UNIQUE-ID - GO:0009262 TYPES - GO:0009117 COMMON-NAME - deoxyribonucleotide metabolic process // UNIQUE-ID - GO:0033865 TYPES - GO:0009117 COMMON-NAME - nucleoside bisphosphate metabolic process SYNONYMS - nucleoside bisphosphate metabolism // UNIQUE-ID - GO:0046496 TYPES - GO:0019362 COMMON-NAME - nicotinamide nucleotide metabolic process SYNONYMS - nicotinamide nucleotide metabolism // UNIQUE-ID - GO:0046128 TYPES - GO:0009119 TYPES - GO:0042278 COMMON-NAME - purine ribonucleoside metabolic process SYNONYMS - purine ribonucleoside metabolism // UNIQUE-ID - GO:0006529 TYPES - GO:0006528 TYPES - GO:0009067 COMMON-NAME - asparagine biosynthetic process // UNIQUE-ID - GO:0006532 TYPES - GO:0006531 TYPES - GO:0009067 COMMON-NAME - aspartate biosynthetic process // UNIQUE-ID - GO:0009085 TYPES - GO:0006553 TYPES - GO:0009067 COMMON-NAME - lysine biosynthetic process // UNIQUE-ID - GO:0009088 TYPES - GO:0006566 TYPES - GO:0009067 COMMON-NAME - threonine biosynthetic process // UNIQUE-ID - GO:0006545 TYPES - GO:0006544 TYPES - GO:0009070 COMMON-NAME - glycine biosynthetic process // UNIQUE-ID - GO:0006564 TYPES - GO:0006563 TYPES - GO:0009070 COMMON-NAME - L-serine biosynthetic process // UNIQUE-ID - GO:0009090 TYPES - GO:0009070 TYPES - GO:0009092 COMMON-NAME - homoserine biosynthetic process // UNIQUE-ID - GO:0006523 TYPES - GO:0006522 TYPES - GO:0009079 COMMON-NAME - alanine biosynthetic process // UNIQUE-ID - GO:0009098 TYPES - GO:0006551 TYPES - GO:0009082 COMMON-NAME - leucine biosynthetic process // UNIQUE-ID - GO:0009099 TYPES - GO:0006573 TYPES - GO:0009082 COMMON-NAME - valine biosynthetic process // UNIQUE-ID - GO:0006526 TYPES - GO:0006525 TYPES - GO:0009084 COMMON-NAME - arginine biosynthetic process // UNIQUE-ID - GO:0006537 TYPES - GO:0006536 TYPES - GO:0009084 COMMON-NAME - glutamate biosynthetic process SYNONYMS - glutamic acid biosynthesis // UNIQUE-ID - GO:0006542 TYPES - GO:0006541 TYPES - GO:0009084 COMMON-NAME - glutamine biosynthetic process // UNIQUE-ID - GO:0009447 TYPES - GO:0006598 TYPES - GO:0009445 COMMON-NAME - putrescine catabolic process // UNIQUE-ID - GO:0009445 TYPES - GO:0006595 COMMON-NAME - putrescine metabolic process // UNIQUE-ID - GO:0046359 TYPES - GO:0019605 TYPES - GO:0019626 COMMON-NAME - butyrate catabolic process // UNIQUE-ID - GO:0006099 TYPES - GO:0046356 COMMON-NAME - tricarboxylic acid cycle SYNONYMS - Krebs cycle SYNONYMS - TCA cycle SYNONYMS - citric acid cycle // UNIQUE-ID - GO:0009423 TYPES - GO:0043650 TYPES - GO:0046417 COMMON-NAME - chorismate biosynthetic process // UNIQUE-ID - GO:0006086 TYPES - GO:0006085 TYPES - GO:0006090 COMMON-NAME - acetyl-CoA biosynthetic process from pyruvate SYNONYMS - pyruvate dehydrogenase pathway // UNIQUE-ID - GO:0006083 TYPES - GO:0032787 COMMON-NAME - acetate metabolic process // UNIQUE-ID - GO:0006090 TYPES - GO:0032787 COMMON-NAME - pyruvate metabolic process // UNIQUE-ID - GO:0046417 TYPES - GO:0043648 COMMON-NAME - chorismate metabolic process // UNIQUE-ID - EC-1.1.1 TYPES - EC-1.1 COMMON-NAME - 1.1.1 -- With NAD(+) or NADP(+) as acceptor // UNIQUE-ID - EC-1.1.2 TYPES - EC-1.1 COMMON-NAME - 1.1.2 -- With a cytochrome as acceptor // UNIQUE-ID - EC-1.1.3 TYPES - EC-1.1 COMMON-NAME - 1.1.3 -- With oxygen as acceptor // UNIQUE-ID - EC-1.1.4 TYPES - EC-1.1 COMMON-NAME - 1.1.4 -- With a disulfide as acceptor // UNIQUE-ID - EC-1.1.5 TYPES - EC-1.1 COMMON-NAME - 1.1.5 -- With a quinone or similar compound as acceptor // UNIQUE-ID - EC-1.1.99 TYPES - EC-1.1 COMMON-NAME - 1.1.99 -- With other acceptors // UNIQUE-ID - EC-1.10.1 TYPES - EC-1.10 COMMON-NAME - 1.10.1 -- With NAD(+) or NADP(+) as acceptor // UNIQUE-ID - EC-1.10.2 TYPES - EC-1.10 COMMON-NAME - 1.10.2 -- With a cytochrome as acceptor // UNIQUE-ID - EC-1.10.3 TYPES - EC-1.10 COMMON-NAME - 1.10.3 -- With oxygen as acceptor // UNIQUE-ID - EC-1.10.99 TYPES - EC-1.10 COMMON-NAME - 1.10.99 -- With other acceptors // UNIQUE-ID - EC-1.11.1 TYPES - EC-1.11 COMMON-NAME - 1.11.1 -- Peroxidases // UNIQUE-ID - EC-1.12.1 TYPES - EC-1.12 COMMON-NAME - 1.12.1 -- With NAD(+) or NADP(+) as acceptor // UNIQUE-ID - EC-1.12.2 TYPES - EC-1.12 COMMON-NAME - 1.12.2 -- With a cytochrome as acceptor // UNIQUE-ID - EC-1.12.5 TYPES - EC-1.12 COMMON-NAME - 1.12.5 -- With a quinone or similar compound as acceptor // UNIQUE-ID - EC-1.12.7 TYPES - EC-1.12 COMMON-NAME - 1.12.7 -- With an iron-sulfur protein as acceptor // UNIQUE-ID - EC-1.12.98 TYPES - EC-1.12 COMMON-NAME - 1.12.98 -- With other known acceptors // UNIQUE-ID - EC-1.12.99 TYPES - EC-1.12 COMMON-NAME - 1.12.99 -- With other acceptors // UNIQUE-ID - EC-1.13.11 TYPES - EC-1.13 COMMON-NAME - 1.13.11 -- With incorporation of two atoms of oxygen // UNIQUE-ID - EC-1.13.12 TYPES - EC-1.13 COMMON-NAME - 1.13.12 -- With incorporation of one atom of oxygen // UNIQUE-ID - EC-1.13.99 TYPES - EC-1.13 COMMON-NAME - 1.13.99 -- Miscellaneous (requires further characterization) // UNIQUE-ID - EC-1.14.11 TYPES - EC-1.14 COMMON-NAME - 1.14.11 -- With 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors // UNIQUE-ID - EC-1.14.12 TYPES - EC-1.14 COMMON-NAME - 1.14.12 -- With NADH or NADPH as one donor, and incorporation of two atoms of oxygen into one donor // UNIQUE-ID - EC-1.14.13 TYPES - EC-1.14 COMMON-NAME - 1.14.13 -- With NADH or NADPH as one donor, and incorporation of one atom of oxygen // UNIQUE-ID - EC-1.14.14 TYPES - EC-1.14 COMMON-NAME - 1.14.14 -- With reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen // UNIQUE-ID - EC-1.14.15 TYPES - EC-1.14 COMMON-NAME - 1.14.15 -- With a reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen // UNIQUE-ID - EC-1.14.16 TYPES - EC-1.14 COMMON-NAME - 1.14.16 -- With reduced pteridine as one donor, and incorporation of one atom of oxygen // UNIQUE-ID - EC-1.14.17 TYPES - EC-1.14 COMMON-NAME - 1.14.17 -- With reduced ascorbate as one donor, and incorporation of one atom of oxygen // UNIQUE-ID - EC-1.14.18 TYPES - EC-1.14 COMMON-NAME - 1.14.18 -- With another compound as one donor, and incorporation of one atom of oxygen // UNIQUE-ID - EC-1.14.19 TYPES - EC-1.14 COMMON-NAME - 1.14.19 -- With oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water // UNIQUE-ID - EC-1.14.20 TYPES - EC-1.14 COMMON-NAME - 1.14.20 -- With 2-oxoglutarate as one donor, and the other dehydrogenated // UNIQUE-ID - EC-1.14.21 TYPES - EC-1.14 COMMON-NAME - 1.14.21 -- With NADH or NADPH as one donor, and the other dehydrogenated // UNIQUE-ID - EC-1.14.3 TYPES - EC-1.14 // UNIQUE-ID - EC-1.14.99 TYPES - EC-1.14 COMMON-NAME - 1.14.99 -- Miscellaneous (requires further characterization) // UNIQUE-ID - EC-1.15.1 TYPES - EC-1.15 COMMON-NAME - 1.15.1 -- Acting on superoxide as acceptor // UNIQUE-ID - EC-1.16.1 TYPES - EC-1.16 COMMON-NAME - 1.16.1 -- With NAD(+) or NADP(+) as acceptor // UNIQUE-ID - EC-1.16.3 TYPES - EC-1.16 COMMON-NAME - 1.16.3 -- With oxygen as acceptor // UNIQUE-ID - EC-1.16.8 TYPES - EC-1.16 COMMON-NAME - 1.16.8 -- With flavin as acceptor // UNIQUE-ID - EC-1.17.1 TYPES - EC-1.17 COMMON-NAME - 1.17.1 -- With NAD(+) or NADP(+) as acceptor // UNIQUE-ID - EC-1.17.3 TYPES - EC-1.17 COMMON-NAME - 1.17.3 -- With oxygen as acceptor // UNIQUE-ID - EC-1.17.4 TYPES - EC-1.17 COMMON-NAME - 1.17.4 -- With a disulfide as acceptor // UNIQUE-ID - EC-1.17.5 TYPES - EC-1.17 COMMON-NAME - 1.17.5 -- With a quinone or similar compound as acceptor // UNIQUE-ID - EC-1.17.7 TYPES - EC-1.17 COMMON-NAME - 1.17.7 -- With an iron-sulfur protein as acceptor // UNIQUE-ID - EC-1.17.99 TYPES - EC-1.17 COMMON-NAME - 1.17.99 -- With other acceptors // UNIQUE-ID - EC-1.18.1 TYPES - EC-1.18 COMMON-NAME - 1.18.1 -- With NAD(+) or NADP(+) as acceptor // UNIQUE-ID - EC-1.18.6 TYPES - EC-1.18 COMMON-NAME - 1.18.6 -- With dinitrogen as acceptor // UNIQUE-ID - EC-1.18.96 TYPES - EC-1.18 COMMON-NAME - 1.18.96 -- With other, known, acceptors // UNIQUE-ID - EC-1.18.99 TYPES - EC-1.18 COMMON-NAME - 1.18.99 -- With H(+) as acceptor // UNIQUE-ID - EC-1.19.6 TYPES - EC-1.19 COMMON-NAME - 1.19.6 -- With dinitrogen as acceptor // UNIQUE-ID - EC-1.2.1 TYPES - EC-1.2 COMMON-NAME - 1.2.1 -- With NAD(+) or NADP(+) as acceptor // UNIQUE-ID - EC-1.2.2 TYPES - EC-1.2 COMMON-NAME - 1.2.2 -- With a cytochrome as acceptor // UNIQUE-ID - EC-1.2.3 TYPES - EC-1.2 COMMON-NAME - 1.2.3 -- With oxygen as acceptor // UNIQUE-ID - EC-1.2.4 TYPES - EC-1.2 COMMON-NAME - 1.2.4 -- With a disulfide as acceptor // UNIQUE-ID - EC-1.2.7 TYPES - EC-1.2 COMMON-NAME - 1.2.7 -- With an iron-sulfur protein as acceptor // UNIQUE-ID - EC-1.2.99 TYPES - EC-1.2 COMMON-NAME - 1.2.99 -- With other acceptors // UNIQUE-ID - EC-1.20.1 TYPES - EC-1.20 COMMON-NAME - 1.20.1 -- Acting on phosphorus or arsenic in donors, with NAD(P)(+) as acceptor // UNIQUE-ID - EC-1.20.4 TYPES - EC-1.20 COMMON-NAME - 1.20.4 -- Acting on phosphorus or arsenic in donors, with disulfide as acceptor // UNIQUE-ID - EC-1.20.98 TYPES - EC-1.20 COMMON-NAME - 1.20.98 -- Acting on phosphorus or arsenic in donors, with other, known acceptors // UNIQUE-ID - EC-1.20.99 TYPES - EC-1.20 COMMON-NAME - 1.20.99 -- Acting on phosphorus or arsenic in donors, with other acceptors // UNIQUE-ID - EC-1.21.3 TYPES - EC-1.21 COMMON-NAME - 1.21.3 -- With oxygen as acceptor // UNIQUE-ID - EC-1.21.4 TYPES - EC-1.21 COMMON-NAME - 1.21.4 -- With a disulfide as acceptor // UNIQUE-ID - EC-1.21.99 TYPES - EC-1.21 COMMON-NAME - 1.21.99 -- With other acceptors // UNIQUE-ID - EC-1.3.1 TYPES - EC-1.3 COMMON-NAME - 1.3.1 -- With NAD(+) or NADP(+) as acceptor // UNIQUE-ID - EC-1.3.2 TYPES - EC-1.3 COMMON-NAME - 1.3.2 -- With a cytochrome as acceptor // UNIQUE-ID - EC-1.3.3 TYPES - EC-1.3 COMMON-NAME - 1.3.3 -- With oxygen as acceptor // UNIQUE-ID - EC-1.3.5 TYPES - EC-1.3 COMMON-NAME - 1.3.5 -- With a quinone or related compound as acceptor // UNIQUE-ID - EC-1.3.7 TYPES - EC-1.3 COMMON-NAME - 1.3.7 -- With an iron-sulfur protein as acceptor // UNIQUE-ID - EC-1.3.99 TYPES - EC-1.3 COMMON-NAME - 1.3.99 -- With other acceptors // UNIQUE-ID - EC-1.4.1 TYPES - EC-1.4 COMMON-NAME - 1.4.1 -- With NAD(+) or NADP(+) as acceptor // UNIQUE-ID - EC-1.4.2 TYPES - EC-1.4 COMMON-NAME - 1.4.2 -- With a cytochrome as acceptor // UNIQUE-ID - EC-1.4.3 TYPES - EC-1.4 COMMON-NAME - 1.4.3 -- With oxygen as acceptor // UNIQUE-ID - EC-1.4.4 TYPES - EC-1.4 COMMON-NAME - 1.4.4 -- With a disulfide as acceptor // UNIQUE-ID - EC-1.4.7 TYPES - EC-1.4 COMMON-NAME - 1.4.7 -- With an iron-sulfur protein as acceptor // UNIQUE-ID - EC-1.4.99 TYPES - EC-1.4 COMMON-NAME - 1.4.99 -- With other acceptors // UNIQUE-ID - EC-1.5.1 TYPES - EC-1.5 COMMON-NAME - 1.5.1 -- With NAD(+) or NADP(+) as acceptor // UNIQUE-ID - EC-1.5.3 TYPES - EC-1.5 COMMON-NAME - 1.5.3 -- With oxygen as acceptor // UNIQUE-ID - EC-1.5.4 TYPES - EC-1.5 COMMON-NAME - 1.5.4 -- With a disulfide as acceptor // UNIQUE-ID - EC-1.5.5 TYPES - EC-1.5 COMMON-NAME - 1.5.5 -- With a quinone or similar compound as acceptor // UNIQUE-ID - EC-1.5.7 TYPES - EC-1.5 COMMON-NAME - 1.5.7 -- With an iron-sulfur protein as acceptor // UNIQUE-ID - EC-1.5.8 TYPES - EC-1.5 COMMON-NAME - 1.5.8 -- With a flavin as acceptor // UNIQUE-ID - EC-1.5.99 TYPES - EC-1.5 COMMON-NAME - 1.5.99 -- With other acceptors // UNIQUE-ID - EC-1.6.1 TYPES - EC-1.6 COMMON-NAME - 1.6.1 -- With NAD(+) or NADP(+) as acceptor // UNIQUE-ID - EC-1.6.2 TYPES - EC-1.6 COMMON-NAME - 1.6.2 -- With a heme protein as acceptor // UNIQUE-ID - EC-1.6.3 TYPES - EC-1.6 COMMON-NAME - 1.6.3 -- With a oxygen as acceptor // UNIQUE-ID - EC-1.6.4 TYPES - EC-1.6 COMMON-NAME - 1.6.4 -- With a disulfide as acceptor // UNIQUE-ID - EC-1.6.5 TYPES - EC-1.6 COMMON-NAME - 1.6.5 -- With a quinone or similar compound as acceptor // UNIQUE-ID - EC-1.6.6 TYPES - EC-1.6 COMMON-NAME - 1.6.6 -- With a nitrogenous group as acceptor // UNIQUE-ID - EC-1.6.7 TYPES - EC-1.6 // UNIQUE-ID - EC-1.6.8 TYPES - EC-1.6 COMMON-NAME - 1.6.8 -- With a flavin as acceptor // UNIQUE-ID - EC-1.6.99 TYPES - EC-1.6 COMMON-NAME - 1.6.99 -- With other acceptors // UNIQUE-ID - EC-1.7.1 TYPES - EC-1.7 COMMON-NAME - 1.7.1 -- With NAD(+) or NADP(+) as acceptor // UNIQUE-ID - EC-1.7.2 TYPES - EC-1.7 COMMON-NAME - 1.7.2 -- With a cytochrome as acceptor // UNIQUE-ID - EC-1.7.3 TYPES - EC-1.7 COMMON-NAME - 1.7.3 -- With oxygen as acceptor // UNIQUE-ID - EC-1.7.7 TYPES - EC-1.7 COMMON-NAME - 1.7.7 -- With an iron-sulfur protein as acceptor // UNIQUE-ID - EC-1.7.99 TYPES - EC-1.7 COMMON-NAME - 1.7.99 -- With other acceptors // UNIQUE-ID - EC-1.8.1 TYPES - EC-1.8 COMMON-NAME - 1.8.1 -- With NAD(+) or NADP(+) as acceptor // UNIQUE-ID - EC-1.8.2 TYPES - EC-1.8 COMMON-NAME - 1.8.2 -- With a cytochrome as acceptor // UNIQUE-ID - EC-1.8.3 TYPES - EC-1.8 COMMON-NAME - 1.8.3 -- With oxygen as acceptor // UNIQUE-ID - EC-1.8.4 TYPES - EC-1.8 COMMON-NAME - 1.8.4 -- With a disulfide as acceptor // UNIQUE-ID - EC-1.8.5 TYPES - EC-1.8 COMMON-NAME - 1.8.5 -- With a quinone or similar compound as acceptor // UNIQUE-ID - EC-1.8.7 TYPES - EC-1.8 COMMON-NAME - 1.8.7 -- With an iron-sulfur protein as acceptor // UNIQUE-ID - EC-1.8.98 TYPES - EC-1.8 COMMON-NAME - 1.8.98 -- With other, known, acceptors // UNIQUE-ID - EC-1.8.99 TYPES - EC-1.8 COMMON-NAME - 1.8.99 -- With other acceptors // UNIQUE-ID - EC-1.9.3 TYPES - EC-1.9 COMMON-NAME - 1.9.3 -- With oxygen as acceptor // UNIQUE-ID - EC-1.9.6 TYPES - EC-1.9 COMMON-NAME - 1.9.6 -- With a nitrogenous group as acceptor // UNIQUE-ID - EC-1.9.99 TYPES - EC-1.9 COMMON-NAME - 1.9.99 -- With other acceptors // UNIQUE-ID - EC-1.97.1 TYPES - EC-1.97 COMMON-NAME - 1.97.1 -- Sole sub-subclass for oxidoreductases that do not belong in the other subclasses // UNIQUE-ID - EC-2.1.1 TYPES - EC-2.1 COMMON-NAME - 2.1.1 -- Methyltransferases // UNIQUE-ID - EC-2.1.2 TYPES - EC-2.1 COMMON-NAME - 2.1.2 -- Hydroxymethyl-, formyl- and related transferases // UNIQUE-ID - EC-2.1.3 TYPES - EC-2.1 COMMON-NAME - 2.1.3 -- Carboxyl- and carbamoyltransferases // UNIQUE-ID - EC-2.1.4 TYPES - EC-2.1 COMMON-NAME - 2.1.4 -- Amidinotransferases // UNIQUE-ID - EC-2.2.1 TYPES - EC-2.2 COMMON-NAME - 2.2.1 -- Transketolases and transaldolases // UNIQUE-ID - EC-2.3.1 TYPES - EC-2.3 COMMON-NAME - 2.3.1 -- Transferring groups other than amino-acyl groups // UNIQUE-ID - EC-2.3.2 TYPES - EC-2.3 COMMON-NAME - 2.3.2 -- Aminoacyltransferases // UNIQUE-ID - EC-2.3.3 TYPES - EC-2.3 COMMON-NAME - 2.3.3 -- Acyl groups converted into alkyl on transfer // UNIQUE-ID - EC-2.4.1 TYPES - EC-2.4 COMMON-NAME - 2.4.1 -- Hexosyltransferases // UNIQUE-ID - EC-2.4.2 TYPES - EC-2.4 COMMON-NAME - 2.4.2 -- Pentosyltransferases // UNIQUE-ID - EC-2.4.99 TYPES - EC-2.4 COMMON-NAME - 2.4.99 -- Transferring other glycosyl groups // UNIQUE-ID - EC-2.5.1 TYPES - EC-2.5 COMMON-NAME - 2.5.1 -- Transferring alkyl or aryl groups, other than methyl groups // UNIQUE-ID - EC-2.6.1 TYPES - EC-2.6 COMMON-NAME - 2.6.1 -- Transaminases (aminotransferases) // UNIQUE-ID - EC-2.6.3 TYPES - EC-2.6 COMMON-NAME - 2.6.3 -- Oximinotransferases // UNIQUE-ID - EC-2.6.99 TYPES - EC-2.6 COMMON-NAME - 2.6.99 -- Transferring other nitrogenous groups // UNIQUE-ID - EC-2.7.1 TYPES - EC-2.7 COMMON-NAME - 2.7.1 -- Phosphotransferases with an alcohol group as acceptor // UNIQUE-ID - EC-2.7.10 TYPES - EC-2.7 COMMON-NAME - 2.7.10 -- Protein-tyrosine kinases // UNIQUE-ID - EC-2.7.11 TYPES - EC-2.7 COMMON-NAME - 2.7.11 -- Protein-serine/threonine kinases // UNIQUE-ID - EC-2.7.12 TYPES - EC-2.7 COMMON-NAME - 2.7.12 -- Dual-specificity kinases (those acting on Ser/Thr and Tyr residues) // UNIQUE-ID - EC-2.7.13 TYPES - EC-2.7 COMMON-NAME - 2.7.13 -- Protein-histidine kinases // UNIQUE-ID - EC-2.7.2 TYPES - EC-2.7 COMMON-NAME - 2.7.2 -- Phosphotransferases with a carboxyl group as acceptor // UNIQUE-ID - EC-2.7.3 TYPES - EC-2.7 COMMON-NAME - 2.7.3 -- Phosphotransferases with a nitrogenous group as acceptor // UNIQUE-ID - EC-2.7.4 TYPES - EC-2.7 COMMON-NAME - 2.7.4 -- Phosphotransferases with a phosphate group as acceptor // UNIQUE-ID - EC-2.7.5 TYPES - EC-2.7 // UNIQUE-ID - EC-2.7.6 TYPES - EC-2.7 COMMON-NAME - 2.7.6 -- Diphosphotransferases // UNIQUE-ID - EC-2.7.7 TYPES - EC-2.7 COMMON-NAME - 2.7.7 -- Nucleotidyltransferases // UNIQUE-ID - EC-2.7.8 TYPES - EC-2.7 COMMON-NAME - 2.7.8 -- Transferases for other substituted phosphate groups // UNIQUE-ID - EC-2.7.9 TYPES - EC-2.7 COMMON-NAME - 2.7.9 -- Phosphotransferases with paired acceptors // UNIQUE-ID - EC-2.7.99 TYPES - EC-2.7 COMMON-NAME - 2.7.99 -- Other protein kinases // UNIQUE-ID - EC-2.8.1 TYPES - EC-2.8 COMMON-NAME - 2.8.1 -- Sulfurtransferases // UNIQUE-ID - EC-2.8.2 TYPES - EC-2.8 COMMON-NAME - 2.8.2 -- Sulfotransferases // UNIQUE-ID - EC-2.8.3 TYPES - EC-2.8 COMMON-NAME - 2.8.3 -- CoA-transferases // UNIQUE-ID - EC-2.8.4 TYPES - EC-2.8 COMMON-NAME - 2.8.4 -- Transferring alkylthio groups // UNIQUE-ID - EC-2.9.1 TYPES - EC-2.9 COMMON-NAME - 2.9.1 -- Selenotransferases // UNIQUE-ID - EC-3.1.1 TYPES - EC-3.1 COMMON-NAME - 3.1.1 -- Carboxylic ester hydrolases // UNIQUE-ID - EC-3.1.11 TYPES - EC-3.1 COMMON-NAME - 3.1.11 -- Exodeoxyribonucleases producing 5'-phosphomonoesters // UNIQUE-ID - EC-3.1.13 TYPES - EC-3.1 COMMON-NAME - 3.1.13 -- Exoribonucleases producing 5'-phosphomonoesters // UNIQUE-ID - EC-3.1.14 TYPES - EC-3.1 COMMON-NAME - 3.1.14 -- Exoribonucleases producing 3'-phosphomonoesters // UNIQUE-ID - EC-3.1.15 TYPES - EC-3.1 COMMON-NAME - 3.1.15 -- Exonucleases active with either ribo- or deoxyribonucleic acid and producing 5'-phosphomonoesters // UNIQUE-ID - EC-3.1.16 TYPES - EC-3.1 COMMON-NAME - 3.1.16 -- Exonucleases active with either ribo- or deoxyribonucleic acid and producing 3'-phosphomonoesters // UNIQUE-ID - EC-3.1.2 TYPES - EC-3.1 COMMON-NAME - 3.1.2 -- Thiolester hydrolases // UNIQUE-ID - EC-3.1.21 TYPES - EC-3.1 COMMON-NAME - 3.1.21 -- Endodeoxyribonucleases producing 5'-phosphomonoesters // UNIQUE-ID - EC-3.1.22 TYPES - EC-3.1 COMMON-NAME - 3.1.22 -- Endodeoxyribonucleases producing other than 5'-phosphomonoesters // UNIQUE-ID - EC-3.1.25 TYPES - EC-3.1 COMMON-NAME - 3.1.25 -- Site-specific endodeoxyribonucleases specific for altered bases // UNIQUE-ID - EC-3.1.26 TYPES - EC-3.1 COMMON-NAME - 3.1.26 -- Endoribonucleases producing 5'-phosphomonoesters // UNIQUE-ID - EC-3.1.27 TYPES - EC-3.1 COMMON-NAME - 3.1.27 -- Endoribonucleases producing other than 5'-phosphomonoesters // UNIQUE-ID - EC-3.1.3 TYPES - EC-3.1 COMMON-NAME - 3.1.3 -- Phosphoric monoester hydrolases // UNIQUE-ID - EC-3.1.30 TYPES - EC-3.1 COMMON-NAME - 3.1.30 -- Endoribonucleases active with either ribo- or deoxyribonucleic acid and producing 5'-phosphomonoesters // UNIQUE-ID - EC-3.1.31 TYPES - EC-3.1 COMMON-NAME - 3.1.31 -- Endoribonucleases active with either ribo- or deoxyribonucleic acid and producing 3'-phosphomonoesters // UNIQUE-ID - EC-3.1.4 TYPES - EC-3.1 COMMON-NAME - 3.1.4 -- Phosphoric diester hydrolases // UNIQUE-ID - EC-3.1.5 TYPES - EC-3.1 COMMON-NAME - 3.1.5 -- Triphosphoric monoester hydrolases // UNIQUE-ID - EC-3.1.6 TYPES - EC-3.1 COMMON-NAME - 3.1.6 -- Sulfuric ester hydrolases // UNIQUE-ID - EC-3.1.7 TYPES - EC-3.1 COMMON-NAME - 3.1.7 -- Diphosphoric monoester hydrolases // UNIQUE-ID - EC-3.1.8 TYPES - EC-3.1 COMMON-NAME - 3.1.8 -- Phosphoric triester hydrolases // UNIQUE-ID - EC-3.10.1 TYPES - EC-3.10 COMMON-NAME - 3.10.1 -- Acting on sulfur-nitrogen bonds // UNIQUE-ID - EC-3.11.1 TYPES - EC-3.11 COMMON-NAME - 3.11.1 -- Acting on carbon-phosphorus bonds // UNIQUE-ID - EC-3.12.1 TYPES - EC-3.12 COMMON-NAME - 3.12.1 -- Acting on sulfur-sulfur bonds // UNIQUE-ID - EC-3.13.1 TYPES - EC-3.13 COMMON-NAME - 3.13.1 -- Acting on carbon-sulfur bonds // UNIQUE-ID - EC-3.2.1 TYPES - EC-3.2 COMMON-NAME - 3.2.1 -- Glycosidases, i.e. enzymes hydrolyzing O- and S-glycosyl compounds // UNIQUE-ID - EC-3.2.2 TYPES - EC-3.2 COMMON-NAME - 3.2.2 -- Hydrolyzing N-glycosyl compounds // UNIQUE-ID - EC-3.2.3 TYPES - EC-3.2 COMMON-NAME - 3.2.3 -- HYDROLYSING S-GLYCOSYL COMPOUNDS // UNIQUE-ID - EC-3.3.1 TYPES - EC-3.3 COMMON-NAME - 3.3.1 -- Thioether and trialkylsulfonium hydrolases // UNIQUE-ID - EC-3.3.2 TYPES - EC-3.3 COMMON-NAME - 3.3.2 -- Ether hydrolases // UNIQUE-ID - EC-3.4.11 TYPES - EC-3.4 COMMON-NAME - 3.4.11 -- Aminopeptidases // UNIQUE-ID - EC-3.4.13 TYPES - EC-3.4 COMMON-NAME - 3.4.13 -- Dipeptidases // UNIQUE-ID - EC-3.4.14 TYPES - EC-3.4 COMMON-NAME - 3.4.14 -- Dipeptidyl-peptidases and tripeptidyl-peptidases // UNIQUE-ID - EC-3.4.15 TYPES - EC-3.4 COMMON-NAME - 3.4.15 -- Peptidyl-dipeptidases // UNIQUE-ID - EC-3.4.16 TYPES - EC-3.4 COMMON-NAME - 3.4.16 -- Serine-type carboxypeptidases // UNIQUE-ID - EC-3.4.17 TYPES - EC-3.4 COMMON-NAME - 3.4.17 -- Metallocarboxypeptidases // UNIQUE-ID - EC-3.4.18 TYPES - EC-3.4 COMMON-NAME - 3.4.18 -- Cysteine-type carboxypeptidases // UNIQUE-ID - EC-3.4.19 TYPES - EC-3.4 COMMON-NAME - 3.4.19 -- Omega peptidases // UNIQUE-ID - EC-3.4.21 TYPES - EC-3.4 COMMON-NAME - 3.4.21 -- Serine endopeptidases // UNIQUE-ID - EC-3.4.22 TYPES - EC-3.4 COMMON-NAME - 3.4.22 -- Cysteine endopeptidases // UNIQUE-ID - EC-3.4.23 TYPES - EC-3.4 COMMON-NAME - 3.4.23 -- Aspartic endopeptidases // UNIQUE-ID - EC-3.4.24 TYPES - EC-3.4 COMMON-NAME - 3.4.24 -- Metalloendopeptidases // UNIQUE-ID - EC-3.4.25 TYPES - EC-3.4 COMMON-NAME - 3.4.25 -- Threonine endopeptidases // UNIQUE-ID - EC-3.4.99 TYPES - EC-3.4 COMMON-NAME - 3.4.99 -- Endopeptidases of unknown catalytic mechanism // UNIQUE-ID - EC-3.5.1 TYPES - EC-3.5 COMMON-NAME - 3.5.1 -- In linear amides // UNIQUE-ID - EC-3.5.2 TYPES - EC-3.5 COMMON-NAME - 3.5.2 -- In cyclic amides // UNIQUE-ID - EC-3.5.3 TYPES - EC-3.5 COMMON-NAME - 3.5.3 -- In linear amidines // UNIQUE-ID - EC-3.5.4 TYPES - EC-3.5 COMMON-NAME - 3.5.4 -- In cyclic amidines // UNIQUE-ID - EC-3.5.5 TYPES - EC-3.5 COMMON-NAME - 3.5.5 -- In nitriles // UNIQUE-ID - EC-3.5.99 TYPES - EC-3.5 COMMON-NAME - 3.5.99 -- In other compounds // UNIQUE-ID - EC-3.6.1 TYPES - EC-3.6 COMMON-NAME - 3.6.1 -- In phosphorous-containing anhydrides // UNIQUE-ID - EC-3.6.2 TYPES - EC-3.6 COMMON-NAME - 3.6.2 -- In sulfonyl-containing anhydrides // UNIQUE-ID - EC-3.6.3 TYPES - EC-3.6 COMMON-NAME - 3.6.3 -- Acting on acid anhydrides; catalyzing transmembrane movement of substances // UNIQUE-ID - EC-3.6.4 TYPES - EC-3.6 COMMON-NAME - 3.6.4 -- Acting on acid anhydrides; involved in cellular and subcellular movement // UNIQUE-ID - EC-3.6.5 TYPES - EC-3.6 COMMON-NAME - 3.6.5 -- Acting on GTP; involved in cellular and subcellular movement // UNIQUE-ID - EC-3.7.1 TYPES - EC-3.7 COMMON-NAME - 3.7.1 -- In ketonic substances // UNIQUE-ID - EC-3.8.1 TYPES - EC-3.8 COMMON-NAME - 3.8.1 -- In C-halide compounds // UNIQUE-ID - EC-3.8.2 TYPES - EC-3.8 COMMON-NAME - 3.8.2 -- IN P-HALIDE COMPOUNDS // UNIQUE-ID - EC-3.9.1 TYPES - EC-3.9 COMMON-NAME - 3.9.1 -- Acting on phosphorus-nitrogen bonds // UNIQUE-ID - EC-4.1.1 TYPES - EC-4.1 COMMON-NAME - 4.1.1 -- Carboxy-lyases // UNIQUE-ID - EC-4.1.2 TYPES - EC-4.1 COMMON-NAME - 4.1.2 -- Aldehyde-lyases // UNIQUE-ID - EC-4.1.3 TYPES - EC-4.1 COMMON-NAME - 4.1.3 -- Oxo-acid-lyases // UNIQUE-ID - EC-4.1.99 TYPES - EC-4.1 COMMON-NAME - 4.1.99 -- Other carbon-carbon lyases // UNIQUE-ID - EC-4.2.1 TYPES - EC-4.2 COMMON-NAME - 4.2.1 -- Hydro-lyases // UNIQUE-ID - EC-4.2.2 TYPES - EC-4.2 COMMON-NAME - 4.2.2 -- Acting on polysaccharides // UNIQUE-ID - EC-4.2.3 TYPES - EC-4.2 COMMON-NAME - 4.2.3 -- Acting on phosphates // UNIQUE-ID - EC-4.2.99 TYPES - EC-4.2 COMMON-NAME - 4.2.99 -- Other carbon-oxygen lyases // UNIQUE-ID - EC-4.3.1 TYPES - EC-4.3 COMMON-NAME - 4.3.1 -- Ammonia-lyases // UNIQUE-ID - EC-4.3.2 TYPES - EC-4.3 COMMON-NAME - 4.3.2 -- Lyases acting on amides, amidines, etc // UNIQUE-ID - EC-4.3.3 TYPES - EC-4.3 COMMON-NAME - 4.3.3 -- Amine-lyases // UNIQUE-ID - EC-4.3.99 TYPES - EC-4.3 COMMON-NAME - 4.3.99 -- Other carbon-nitrogen-lyases // UNIQUE-ID - EC-4.4.1 TYPES - EC-4.4 COMMON-NAME - 4.4.1 -- Carbon-sulfur lyases // UNIQUE-ID - EC-4.5.1 TYPES - EC-4.5 COMMON-NAME - 4.5.1 -- Carbon-halide lyases // UNIQUE-ID - EC-4.6.1 TYPES - EC-4.6 COMMON-NAME - 4.6.1 -- Phosphorus-oxygen lyases // UNIQUE-ID - EC-4.99.1 TYPES - EC-4.99 COMMON-NAME - 4.99.1 -- Sole sub-subclass for lyases that do not belong in the other subclasses // UNIQUE-ID - EC-5.1.1 TYPES - EC-5.1 COMMON-NAME - 5.1.1 -- Acting on amino acids and derivatives // UNIQUE-ID - EC-5.1.2 TYPES - EC-5.1 COMMON-NAME - 5.1.2 -- Acting on hydroxy acids and derivatives // UNIQUE-ID - EC-5.1.3 TYPES - EC-5.1 COMMON-NAME - 5.1.3 -- Acting on carbohydrates and derivatives // UNIQUE-ID - EC-5.1.99 TYPES - EC-5.1 COMMON-NAME - 5.1.99 -- Acting on other compounds // UNIQUE-ID - EC-5.2.1 TYPES - EC-5.2 COMMON-NAME - 5.2.1 -- Cis-trans Isomerases // UNIQUE-ID - EC-5.3.1 TYPES - EC-5.3 COMMON-NAME - 5.3.1 -- Interconverting aldoses and ketoses, and related compounds // UNIQUE-ID - EC-5.3.2 TYPES - EC-5.3 COMMON-NAME - 5.3.2 -- Interconverting keto- and enol- groups // UNIQUE-ID - EC-5.3.3 TYPES - EC-5.3 COMMON-NAME - 5.3.3 -- Transposing C==C bonds // UNIQUE-ID - EC-5.3.4 TYPES - EC-5.3 COMMON-NAME - 5.3.4 -- Transposing S-S bonds // UNIQUE-ID - EC-5.3.99 TYPES - EC-5.3 COMMON-NAME - 5.3.99 -- Other intramolecular oxidoreductases // UNIQUE-ID - EC-5.4.1 TYPES - EC-5.4 COMMON-NAME - 5.4.1 -- Transferring acyl groups // UNIQUE-ID - EC-5.4.2 TYPES - EC-5.4 COMMON-NAME - 5.4.2 -- Phosphotransferases (phosphomutases) // UNIQUE-ID - EC-5.4.3 TYPES - EC-5.4 COMMON-NAME - 5.4.3 -- Transferring amino groups // UNIQUE-ID - EC-5.4.4 TYPES - EC-5.4 COMMON-NAME - 5.4.4 -- Transferring hydroxy groups // UNIQUE-ID - EC-5.4.99 TYPES - EC-5.4 COMMON-NAME - 5.4.99 -- Transferring other groups // UNIQUE-ID - EC-5.5.1 TYPES - EC-5.5 COMMON-NAME - 5.5.1 -- Intramolecular lyases // UNIQUE-ID - EC-5.99.1 TYPES - EC-5.99 COMMON-NAME - 5.99.1 -- Sole sub-subclass for isomerases that do not belong in the other subclasses // UNIQUE-ID - EC-6.1.1 TYPES - EC-6.1 COMMON-NAME - 6.1.1 -- Ligases forming aminoacyl-tRNA and related compounds // UNIQUE-ID - EC-6.2.1 TYPES - EC-6.2 COMMON-NAME - 6.2.1 -- Acid--thiol ligases // UNIQUE-ID - EC-6.3.1 TYPES - EC-6.3 COMMON-NAME - 6.3.1 -- Acid--ammonia (or amide) ligases (amide synthases) // UNIQUE-ID - EC-6.3.2 TYPES - EC-6.3 COMMON-NAME - 6.3.2 -- Acid--D-amino-acid ligases (peptide synthases) // UNIQUE-ID - EC-6.3.3 TYPES - EC-6.3 COMMON-NAME - 6.3.3 -- Cyclo-ligases // UNIQUE-ID - EC-6.3.4 TYPES - EC-6.3 COMMON-NAME - 6.3.4 -- Other carbon--nitrogen ligases // UNIQUE-ID - EC-6.3.5 TYPES - EC-6.3 COMMON-NAME - 6.3.5 -- Carbon--nitrogen ligases with glutamine as amido-N-donor // UNIQUE-ID - EC-6.4.1 TYPES - EC-6.4 COMMON-NAME - 6.4.1 -- Ligases that form carbon-carbon bonds // UNIQUE-ID - EC-6.5.1 TYPES - EC-6.5 COMMON-NAME - 6.5.1 -- Ligases that form phosphoric-ester bonds // UNIQUE-ID - EC-6.6.1 TYPES - EC-6.6 COMMON-NAME - 6.6.1 -- Forming coordination complexes // UNIQUE-ID - TAX-58023 TYPES - TAX-3193 COMMON-NAME - Tracheophyta SYNONYMS - vascular plants // UNIQUE-ID - TAX-33316 TYPES - TAX-33213 COMMON-NAME - Coelomata // UNIQUE-ID - BC-1.5.1.1 TYPES - BC-1.5.1 COMMON-NAME - glutamate // UNIQUE-ID - BC-1.5.1.10 TYPES - BC-1.5.1 COMMON-NAME - glycine // UNIQUE-ID - BC-1.5.1.11 TYPES - BC-1.5.1 COMMON-NAME - serine // UNIQUE-ID - BC-1.5.1.12 TYPES - BC-1.5.1 COMMON-NAME - cysteine // UNIQUE-ID - BC-1.5.1.13 TYPES - BC-1.5.1 COMMON-NAME - phenylalanine // UNIQUE-ID - BC-1.5.1.14 TYPES - BC-1.5.1 COMMON-NAME - tyrosine // UNIQUE-ID - BC-1.5.1.15 TYPES - BC-1.5.1 COMMON-NAME - tryptophan // UNIQUE-ID - BC-1.5.1.16 TYPES - BC-1.5.1 COMMON-NAME - histidine // UNIQUE-ID - BC-1.5.1.17 TYPES - BC-1.5.1 COMMON-NAME - alanine // UNIQUE-ID - BC-1.5.1.18 TYPES - BC-1.5.1 COMMON-NAME - isoleucine/valine // UNIQUE-ID - BC-1.5.1.19 TYPES - BC-1.5.1 COMMON-NAME - leucine // UNIQUE-ID - BC-1.5.1.2 TYPES - BC-1.5.1 COMMON-NAME - glutamine // UNIQUE-ID - BC-1.5.1.20 TYPES - BC-1.5.1 COMMON-NAME - chorismate // UNIQUE-ID - BC-1.5.1.21 TYPES - BC-1.5.1 COMMON-NAME - homoserine // UNIQUE-ID - BC-1.5.1.3 TYPES - BC-1.5.1 COMMON-NAME - arginine // UNIQUE-ID - BC-1.5.1.4 TYPES - BC-1.5.1 COMMON-NAME - proline // UNIQUE-ID - BC-1.5.1.5 TYPES - BC-1.5.1 COMMON-NAME - aspartate // UNIQUE-ID - BC-1.5.1.6 TYPES - BC-1.5.1 COMMON-NAME - asparagine // UNIQUE-ID - BC-1.5.1.7 TYPES - BC-1.5.1 COMMON-NAME - lysine // UNIQUE-ID - BC-1.5.1.8 TYPES - BC-1.5.1 COMMON-NAME - threonine // UNIQUE-ID - BC-1.5.1.9 TYPES - BC-1.5.1 COMMON-NAME - methionine // UNIQUE-ID - BC-1.5.2.1 TYPES - BC-1.5.2 COMMON-NAME - purine biosynthesis // UNIQUE-ID - BC-1.5.2.2 TYPES - BC-1.5.2 COMMON-NAME - pyrimidine biosynthesis // UNIQUE-ID - BC-1.5.2.3 TYPES - BC-1.5.2 COMMON-NAME - purine ribonucleotide biosynthesis // UNIQUE-ID - BC-1.5.2.4 TYPES - BC-1.5.2 COMMON-NAME - pyrimidine ribonucleotide biosynthesis // UNIQUE-ID - BC-1.5.3.1 TYPES - BC-1.5.3 COMMON-NAME - biotin // UNIQUE-ID - BC-1.5.3.10 TYPES - BC-1.5.3 COMMON-NAME - glutathione // UNIQUE-ID - BC-1.5.3.11 TYPES - BC-1.5.3 COMMON-NAME - menaquinone, ubiquinone // UNIQUE-ID - BC-1.5.3.12 TYPES - BC-1.5.3 COMMON-NAME - heme, porphyrine // UNIQUE-ID - BC-1.5.3.13 TYPES - BC-1.5.3 COMMON-NAME - cobalamin // UNIQUE-ID - BC-1.5.3.14 TYPES - BC-1.5.3 COMMON-NAME - enterochelin (enterobactin) // UNIQUE-ID - BC-1.5.3.2 TYPES - BC-1.5.3 COMMON-NAME - folic acid // UNIQUE-ID - BC-1.5.3.3 TYPES - BC-1.5.3 COMMON-NAME - lipoate // UNIQUE-ID - BC-1.5.3.4 TYPES - BC-1.5.3 COMMON-NAME - molybdenum // UNIQUE-ID - BC-1.5.3.5 TYPES - BC-1.5.3 COMMON-NAME - Coenzyme A and its modification // UNIQUE-ID - BC-1.5.3.6 TYPES - BC-1.5.3 COMMON-NAME - pyridoxal 5'phosphate // UNIQUE-ID - BC-1.5.3.7 TYPES - BC-1.5.3 COMMON-NAME - nicotinamide adenine dinucleotide // UNIQUE-ID - BC-1.5.3.8 TYPES - BC-1.5.3 COMMON-NAME - thiamin // UNIQUE-ID - BC-1.5.3.9 TYPES - BC-1.5.3 COMMON-NAME - riboflavin // UNIQUE-ID - BC-1.6.15.1 TYPES - BC-1.6.15 COMMON-NAME - cytochromes // UNIQUE-ID - BC-1.6.15.2 TYPES - BC-1.6.15 COMMON-NAME - thioredoxin, glutaredoxin // UNIQUE-ID - BC-1.6.15.3 TYPES - BC-1.6.15 COMMON-NAME - biotin carboxyl carrier protein // UNIQUE-ID - BC-1.6.15.4 TYPES - BC-1.6.15 COMMON-NAME - acyl carrier protein // UNIQUE-ID - BC-1.6.3.1 TYPES - BC-1.6.3 COMMON-NAME - O antigen // UNIQUE-ID - BC-1.6.3.2 TYPES - BC-1.6.3 COMMON-NAME - core region // UNIQUE-ID - BC-1.6.3.3 TYPES - BC-1.6.3 COMMON-NAME - lipid A // UNIQUE-ID - BC-3.1.1.1 TYPES - BC-3.1.1 COMMON-NAME - bent DNA or supercoiling, inversion // UNIQUE-ID - BC-3.1.1.2 TYPES - BC-3.1.1 COMMON-NAME - methylation // UNIQUE-ID - BC-3.1.2.1 TYPES - BC-3.1.2 COMMON-NAME - sigma factors, anti-sigmafactors // UNIQUE-ID - BC-3.1.2.2 TYPES - BC-3.1.2 COMMON-NAME - activator // UNIQUE-ID - BC-3.1.2.3 TYPES - BC-3.1.2 COMMON-NAME - repressor // UNIQUE-ID - BC-3.1.2.4 TYPES - BC-3.1.2 COMMON-NAME - complex regulation // UNIQUE-ID - BC-3.1.2.5 TYPES - BC-3.1.2 COMMON-NAME - action unknown // UNIQUE-ID - BC-3.1.3.1 TYPES - BC-3.1.3 COMMON-NAME - translation attenuation and efficiency // UNIQUE-ID - BC-3.1.3.2 TYPES - BC-3.1.3 COMMON-NAME - covalent modification, demodification, maturation // UNIQUE-ID - BC-3.1.3.3 TYPES - BC-3.1.3 COMMON-NAME - inhibition / activation of enzymes // UNIQUE-ID - BC-3.1.3.4 TYPES - BC-3.1.3 COMMON-NAME - proteases, cleavage of compounds // UNIQUE-ID - BC-3.1.3.5 TYPES - BC-3.1.3 COMMON-NAME - multilayer regulatory system // UNIQUE-ID - BC-3.1.3.6 TYPES - BC-3.1.3 COMMON-NAME - antisense RNA // UNIQUE-ID - BC-4.3.A.1 TYPES - BC-4.3.A COMMON-NAME - The ATP-binding Cassette (ABC) Superfamily + ABC-type Uptake Permeases // UNIQUE-ID - BC-4.3.A.2 TYPES - BC-4.3.A COMMON-NAME - The H+- or Na+-translocating F-type, V-type and A-type ATPase (F-ATPase) Su // UNIQUE-ID - BC-4.3.A.3 TYPES - BC-4.3.A COMMON-NAME - The P-type ATPase (P-ATPase) Superfamily // UNIQUE-ID - BC-4.3.A.4 TYPES - BC-4.3.A COMMON-NAME - The Arsenite-Antimonite (Ars) Efflux Family // UNIQUE-ID - BC-4.3.A.5 TYPES - BC-4.3.A COMMON-NAME - The Type II (General) Secretory Pathway (IISP) Family // UNIQUE-ID - D-myo-inositol-pentakisphosphates TYPES - Myo-inositol-penta-kis-phosphates COMMON-NAME - a D myo-inositol penta kis phosphate // UNIQUE-ID - CPD-11933 TYPES - D-myo-inositol-pentakisphosphates TYPES - Pyrophosphate-inositol-phosphates COMMON-NAME - a diphospho-1D-myo-inositol pentakisphosphate SYNONYMS - 5-PP-InsP5 SYNONYMS - diphosphoinositol pentakisphosphate SYNONYMS - 5-diphospho-1D-myo-inositol pentakisphosphate // UNIQUE-ID - Bisdiphospho-myo-inositol-polyphosphates TYPES - Pyrophosphate-inositol-phosphates COMMON-NAME - a bis(diphospho)-1D-myo-inositol tetrakisphosphate COMMENT - This compound stands for the generic description of all bis(diphospho)-1D-myo-inositol tetrakisphosphate molecules. These compounds may have the diphospho groups present at any two locations. / /Even though the diphospho groups in the structure shown here are adjacent, this may not be the case for all instances. The structure is provided for illustration purpose only. SYNONYMS - 1D-myo-inositol bisdiphosphate // UNIQUE-ID - N-acetyl-a-D-hexosamine-1-phosphates TYPES - Hexosamines TYPES - Alpha-Hexose-1-Phosphates COMMON-NAME - an N-acetyl-α-D-hexosamine-1-phosphate // UNIQUE-ID - Hexosaminides TYPES - Hexosamines COMMON-NAME - a hexosaminide // UNIQUE-ID - N-acetyl-D-hexosamines TYPES - Hexosamines COMMON-NAME - an N-acetyl-D-hexosamine // UNIQUE-ID - D-Galactose TYPES - D-Hexoses COMMON-NAME - D-galactose // UNIQUE-ID - D-Glucose TYPES - D-Hexoses COMMON-NAME - D-glucose // UNIQUE-ID - FRU TYPES - D-Hexoses TYPES - Fructose COMMON-NAME - D-fructose COMMENT - Fructose is a 6-carbon polyhydroxyketone. When dissolved in solution fructose forms one of two /ring structures - the 5-member ring |FRAME: Fructofuranose|and the 6-member ring |FRAME: D-Fructopyranose|. /Mixtures at equilibrium contain 70% fructopyranose and 30% fructofuranose. / /A homopolymeric form of fructose is called |FRAME: Fructans|, and can be formed by β(2->1) /or β(2->6) glycosidic bonds between fructose molecules. / SYNONYMS - laevosan SYNONYMS - levugen SYNONYMS - laevoral SYNONYMS - fructosteril SYNONYMS - levulose SYNONYMS - fru SYNONYMS - fru-ring SYNONYMS - D-fructose-ring SYNONYMS - D-fructose // UNIQUE-ID - L-Fructose TYPES - L-Hexoses TYPES - Fructose COMMON-NAME - L-fructose // UNIQUE-ID - L-Fructopyranose TYPES - L-Fructose TYPES - Pyranoses COMMON-NAME - L-fructopyranose // UNIQUE-ID - L-FUCOSE TYPES - L-Hexoses COMMON-NAME - L-fucose SYNONYMS - fucose SYNONYMS - 6-deoxy-L-galactose SYNONYMS - L-galactomethylose // UNIQUE-ID - L-mannose TYPES - L-Hexoses COMMON-NAME - L-mannose SYNONYMS - L-mannopyranose // UNIQUE-ID - L-rhamnose TYPES - L-Hexoses COMMON-NAME - L-rhamnose SYNONYMS - L-rhamnopyranose SYNONYMS - 6-Deoxy-L-mannose SYNONYMS - L-Mannomethylose // UNIQUE-ID - 2-Dehydropyranoses TYPES - Pyranoses COMMON-NAME - a 2-dehydropyranose // UNIQUE-ID - 23-Didehydropyranoses TYPES - Pyranoses COMMON-NAME - a 2,3-didehydropyranose // UNIQUE-ID - 3-Dehydropyranoses TYPES - Pyranoses COMMON-NAME - a 3-dehydropyranose // UNIQUE-ID - D-ARABINOSE TYPES - Arabinoses TYPES - D-Pentoses COMMON-NAME - D-arabinose SYNONYMS - arabinose // UNIQUE-ID - L-ARABINOSE TYPES - Arabinoses COMMON-NAME - L-arabinose // UNIQUE-ID - RIBOSE TYPES - D-Pentoses COMMON-NAME - D-ribose SYNONYMS - α-D-ribose SYNONYMS - ribose SYNONYMS - α-D-ribose-5 SYNONYMS - α-D-ribofuranose // UNIQUE-ID - Short-chain-iota-carrageenans TYPES - iota-Carrageenans COMMON-NAME - a short chain ι carrageenan // UNIQUE-ID - O-phospho-phospho-alpha-glucans TYPES - 1-4-alpha-D-Glucan COMMON-NAME - O-phospho-[phospho-α-glucan] // UNIQUE-ID - Phospho-alpha-glucans TYPES - 1-4-alpha-D-Glucan COMMON-NAME - [phospho-α-glucan] // UNIQUE-ID - 1-3-beta-D-Glucans TYPES - Beta-D-Glucans COMMON-NAME - a 1,3-β-D-glucan SYNONYMS - 1,3-β-D-glucan(n-1) SYNONYMS - 1,3-β-D-glucan(n+1) SYNONYMS - 1,3-β-D-glucan(n) // UNIQUE-ID - 1-4-beta-D-Glucan TYPES - Beta-D-Glucans COMMON-NAME - a 1,4-β-D-glucan COMMENT - This compound class stands for 1,4-β-D-glucosyl polymers. SYNONYMS - (1,4-β-D-glucosyl)(n) SYNONYMS - (1,4-β-D-glucosyl)(n+1) SYNONYMS - (1,4-β-D-glucosyl)(n-1) // UNIQUE-ID - CPD-9965 TYPES - VERY-LONG-CHAIN-FATTY-ACYL-COA COMMON-NAME - arachidoyl-CoA SYNONYMS - [5-[(6-amino-9H-purin-9-yl)]-4-hydroxy-2-[[hydroxy-[hydroxy-[3- hydroxy-3-[2-(2-icosanoylsulfanylethylcarbamoyl)ethylcarbamoyl]- 2,2-dimethyl-propoxy]-phosphinoyl]oxy-phosphinoyl]oxymethyl] tetrahydrofuran-3-yl]oxyphosphonic acid SYNONYMS - eicosanoyl-CoA SYNONYMS - icosanoyl-CoA SYNONYMS - coenzyme A, S-eicosanoate // UNIQUE-ID - Flavonol-3-O-B-D-Glucosides TYPES - Flavonol-3-O-D-Glucosides COMMON-NAME - a flavonol-3-O-β-D-glucoside // UNIQUE-ID - GO:0030409 TYPES - GO:0030407 COMMON-NAME - glutamate formimidoyltransferase activity SYNONYMS - 5-formimidoyltetrahydrofolate:L-glutamate N-formimidoyltransferase activity SYNONYMS - formiminoglutamic acid transferase activity SYNONYMS - formiminoglutamic formiminotransferase activity SYNONYMS - glutamate formiminotransferase activity SYNONYMS - glutamate formyltransferase activity // UNIQUE-ID - GO:0016275 TYPES - GO:0016274 COMMON-NAME - [cytochrome c]-arginine N-methyltransferase activity SYNONYMS - cytochrome c-arginine N-methyltransferase activity SYNONYMS - S-adenosyl-L-methionine:cytochrome c-arginine nomega-methyltransferasea SYNONYMS - S-adenosyl-L-methionine:cytochrome c-arginine omega-N-methyltransferasea // UNIQUE-ID - GO:0035241 TYPES - GO:0016274 COMMON-NAME - protein-arginine omega-N monomethyltransferase activity // UNIQUE-ID - GO:0035242 TYPES - GO:0016274 COMMON-NAME - protein-arginine omega-N asymmetric methyltransferase activity COMMENT - Note that type I protein arginine N-methyltransferase enzymes possess 'protein-arginine omega-N monomethyltransferase activity ; GO:0035241' and 'protein-arginine omega-N asymmetric methyltransferase activity ; GO:0035242'. // UNIQUE-ID - GO:0008458 TYPES - GO:0016406 TYPES - GO:0016414 COMMON-NAME - carnitine O-octanoyltransferase activity SYNONYMS - carnitine medium-chain acyltransferase activity SYNONYMS - easily solubilized mitochondrial carnitine palmitoyltransferase SYNONYMS - medium-chain/long-chain carnitine acyltransferase activity SYNONYMS - octanoyl-CoA:L-carnitine O-octanoyltransferase activity SYNONYMS - overt mitochondrial carnitine palmitoyltransferase // UNIQUE-ID - GO:0004144 TYPES - GO:0016411 COMMON-NAME - diacylglycerol O-acyltransferase activity SYNONYMS - 1,2-diacylglycerol acyltransferase activity SYNONYMS - acyl-CoA:1,2-diacylglycerol O-acyltransferase activity SYNONYMS - diacylglycerol acyltransferase activity SYNONYMS - diglyceride acyltransferase activity SYNONYMS - diglyceride O-acyltransferase activity SYNONYMS - palmitoyl-CoA-sn-1,2-diacylglycerol acyltransferase activity // UNIQUE-ID - GO:0016287 TYPES - GO:0016413 COMMON-NAME - glycerone-phosphate O-acyltransferase activity SYNONYMS - acyl-CoA:glycerone-phosphate O-acyltransferase activity SYNONYMS - dihydroxyacetone phosphate acyltransferase activity // UNIQUE-ID - GO:0004042 TYPES - GO:0008080 COMMON-NAME - acetyl-CoA:L-glutamate N-acetyltransferase activity SYNONYMS - acetyl-CoA:L-glutamate N-acetyltransferase activity SYNONYMS - acetylglutamate acetylglutamate synthetase activity SYNONYMS - AGAS SYNONYMS - amino acid acetyltransferase activity SYNONYMS - N-acetylglutamate synthase activity // UNIQUE-ID - GO:0004060 TYPES - GO:0008080 COMMON-NAME - arylamine N-acetyltransferase activity SYNONYMS - 2-naphthylamine N-acetyltransferase activity SYNONYMS - 4-aminobiphenyl N-acetyltransferase activity SYNONYMS - acetyl CoA-arylamine N-acetyltransferase activity SYNONYMS - acetyl-CoA:arylamine N-acetyltransferase activity SYNONYMS - arylamine acetylase activity SYNONYMS - arylamine acetyltransferase activity SYNONYMS - beta-naphthylamine N-acetyltransferase activity SYNONYMS - indoleamine N-acetyltransferase activity SYNONYMS - p-aminosalicylate N-acetyltransferase activity // UNIQUE-ID - GO:0004468 TYPES - GO:0008080 COMMON-NAME - lysine N-acetyltransferase activity SYNONYMS - acetyl-phosphate:L-lysine 6-N-acetyltransferase activity SYNONYMS - acetyl-phosphate:L-lysine N6-acetyltransferase activity SYNONYMS - LAT activity SYNONYMS - lysine acetyltransferase activity SYNONYMS - lysine N(6)-acetyltransferase activity SYNONYMS - lysine N6-acetyltransferase activity // UNIQUE-ID - GO:0008890 TYPES - GO:0016453 COMMON-NAME - glycine C-acetyltransferase activity SYNONYMS - 2-amino-3-ketobutyrate CoA ligase activity SYNONYMS - 2-amino-3-ketobutyrate coenzyme A ligase activity SYNONYMS - 2-amino-3-ketobutyrate-CoA ligase activity SYNONYMS - acetyl-CoA:glycine C-acetyltransferase activity SYNONYMS - aminoacetone synthase activity SYNONYMS - glycine acetyltransferase activity // UNIQUE-ID - GO:0004682 TYPES - GO:0004680 COMMON-NAME - protein kinase CK2 activity SYNONYMS - casein kinase II activity SYNONYMS - casein kinase II, catalytic activity SYNONYMS - protein kinase CK2, intrinsic catalyst activity // UNIQUE-ID - GO:0004689 TYPES - GO:0004683 COMMON-NAME - phosphorylase kinase activity SYNONYMS - ATP:phosphorylase-b phosphotransferase activity SYNONYMS - dephosphophosphorylase kinase activity SYNONYMS - glycogen phosphorylase kinase activity SYNONYMS - PHK SYNONYMS - phosphorylase b kinase activity SYNONYMS - phosphorylase B kinase activity SYNONYMS - phosphorylase kinase (phosphorylating) activity SYNONYMS - phosphorylase kinase, intrinsic catalyst activity SYNONYMS - STK17 // UNIQUE-ID - GO:0004691 TYPES - GO:0004690 COMMON-NAME - cAMP-dependent protein kinase activity SYNONYMS - 3',5' cAMP-dependent protein kinase activity SYNONYMS - 3',5'-cAMP-dependent protein kinase activity SYNONYMS - adenosine 3',5'-cyclophosphate-dependent protein kinase activity SYNONYMS - AMPK SYNONYMS - ATP:protein phosphotransferase (cAMP-dependent) activity SYNONYMS - cAMP-dependent protein kinase activity SYNONYMS - cAMP-dependent protein kinase, intrinsic catalyst activity SYNONYMS - cyclic AMP-dependent protein kinase activity SYNONYMS - PKA SYNONYMS - PKA C SYNONYMS - protein kinase A activity SYNONYMS - STK22 // UNIQUE-ID - GO:0004692 TYPES - GO:0004690 COMMON-NAME - cGMP-dependent protein kinase activity SYNONYMS - 3':5'-cyclic GMP-dependent protein kinase activity SYNONYMS - ATP:protein phosphotransferase (cGMP-dependent) activity SYNONYMS - cGMP-dependent protein kinase activity SYNONYMS - cGMP-dependent protein kinase ibeta activity SYNONYMS - guanosine 3':5'-cyclic monophosphate-dependent protein kinase activity SYNONYMS - PKG SYNONYMS - PKG 1alpha SYNONYMS - PKG 1beta SYNONYMS - PKG II SYNONYMS - STK23 // UNIQUE-ID - GO:0016361 TYPES - GO:0005025 TYPES - GO:0017002 COMMON-NAME - activin receptor activity, type I SYNONYMS - type I activin receptor activity // UNIQUE-ID - GO:0005005 TYPES - GO:0005003 COMMON-NAME - transmembrane-ephrin receptor activity SYNONYMS - transmembrane-Eph receptor activity // UNIQUE-ID - GO:0004137 TYPES - GO:0019136 COMMON-NAME - deoxycytidine kinase activity SYNONYMS - 2'-deoxycytidine kinase activity SYNONYMS - Ara-C kinase activity SYNONYMS - arabinofuranosylcytosine kinase activity SYNONYMS - deoxycytidine kinase (phosphorylating) SYNONYMS - deoxycytidine-cytidine kinase activity SYNONYMS - NTP:deoxycytidine 5'-phosphotransferase activity // UNIQUE-ID - GO:0004138 TYPES - GO:0019136 COMMON-NAME - deoxyguanosine kinase activity SYNONYMS - (dihydroxypropoxymethyl)guanine kinase activity SYNONYMS - 2'-deoxyguanosine kinase activity SYNONYMS - ATP:deoxyguanosine 5'-phosphotransferase activity SYNONYMS - deoxyguanosine kinase (phosphorylating) SYNONYMS - NTP-deoxyguanosine 5'-phosphotransferase activity // UNIQUE-ID - GO:0004797 TYPES - GO:0019136 COMMON-NAME - thymidine kinase activity SYNONYMS - 2'-deoxythymidine kinase activity SYNONYMS - ATP:thymidine 5'-phosphotransferase activity SYNONYMS - deoxythymidine kinase (phosphorylating) SYNONYMS - thymidine kinase (phosphorylating) // UNIQUE-ID - GO:0003721 TYPES - GO:0003720 COMMON-NAME - telomeric template RNA reverse transcriptase activity SYNONYMS - telomerase, catalyst // UNIQUE-ID - GO:0004232 TYPES - GO:0008133 COMMON-NAME - interstitial collagenase activity SYNONYMS - matrix metalloproteinase 1 SYNONYMS - MMP-1 SYNONYMS - vertebrate collagenase activity // UNIQUE-ID - GO:0008130 TYPES - GO:0008133 COMMON-NAME - neutrophil collagenase activity SYNONYMS - matrix metalloproteinase 8 activity SYNONYMS - MMP-8 SYNONYMS - PMNL collagenase activity // UNIQUE-ID - GO:0016512 TYPES - GO:0016511 COMMON-NAME - endothelin-converting enzyme 1 activity SYNONYMS - ECE-1 activity // UNIQUE-ID - GO:0004182 TYPES - GO:0004181 COMMON-NAME - carboxypeptidase A activity SYNONYMS - carboxypolypeptidase activity SYNONYMS - pancreatic carboxypeptidase A SYNONYMS - tissue carboxypeptidase A // UNIQUE-ID - GO:0004183 TYPES - GO:0004181 COMMON-NAME - carboxypeptidase E activity SYNONYMS - carboxypeptidase H activity SYNONYMS - cobalt-stimulated chromaffin granule carboxypeptidase activity SYNONYMS - enkephalin convertase activity SYNONYMS - enkephalin precursor carboxypeptidase activity SYNONYMS - enkephalin-precursor endopeptidase activity SYNONYMS - insulin granule-associated carboxypeptidase activity SYNONYMS - membrane-bound carboxypeptidase activity SYNONYMS - peptidyl-L-lysine(-L-arginine) hydrolase // UNIQUE-ID - GO:0004184 TYPES - GO:0004181 COMMON-NAME - lysine carboxypeptidase activity SYNONYMS - anaphylatoxin inactivator activity SYNONYMS - arginine carboxypeptidase activity SYNONYMS - bradykinase activity SYNONYMS - bradykinin-decomposing enzyme SYNONYMS - carboxypeptidase N activity SYNONYMS - CPase N SYNONYMS - creatine kinase conversion factor SYNONYMS - creatinine kinase convertase activity SYNONYMS - hippuryllysine hydrolase activity SYNONYMS - kininase I activity SYNONYMS - kininase Ia SYNONYMS - lysine (arginine) carboxypeptidase activity SYNONYMS - lysine(arginine) carboxypeptidase activity SYNONYMS - peptidyl-L-lysine(-L-arginine) hydrolase SYNONYMS - plasma carboxypeptidase B // UNIQUE-ID - GO:0008472 TYPES - GO:0004181 COMMON-NAME - metallocarboxypeptidase D activity SYNONYMS - carboxypeptidase D (cattle, human, mouse, rat) SYNONYMS - gp180 (duck) // UNIQUE-ID - GO:0043275 TYPES - GO:0004181 COMMON-NAME - glutamate carboxypeptidase II activity COMMENT - Note that this function was formerly EC:3.4.19.8. SYNONYMS - acetylaspartylglutamate dipeptidase activity SYNONYMS - folate hydrolase activity SYNONYMS - folylpolyglutamate hydrolase activity SYNONYMS - membrane glutamate carboxypeptidase SYNONYMS - mGCP SYNONYMS - microsomal gamma-glutamyl carboxypeptidase SYNONYMS - N-acetylated alpha-linked acidic dipeptidase activity SYNONYMS - N-acetylated-alpha-linked-amino dipeptidase activity SYNONYMS - N-acetylated-gamma-linked-acidic dipeptidase (NAALADase) SYNONYMS - N-acetylated-gamma-linked-acidic dipeptidase activity SYNONYMS - NAALA dipeptidase activity SYNONYMS - NAALADase activity SYNONYMS - prostate-specific membrane antigen SYNONYMS - prostrate-specific membrane antigen SYNONYMS - PSM antigen SYNONYMS - PSMA SYNONYMS - pteroylpoly-gamma-glutamate carboxypeptidase activity SYNONYMS - pteroylpoly-gamma-glutamate hydrolase activity SYNONYMS - pteroylpolygammaglutamyl hydrolase activity SYNONYMS - pteroylpolyglutamate hydrolase activity SYNONYMS - pteroylpolyglutamic acid hydrolase activity SYNONYMS - rat NAAG peptidase // UNIQUE-ID - GO:0050425 TYPES - GO:0004181 COMMON-NAME - carboxypeptidase B activity SYNONYMS - pancreatic carboxypeptidase B SYNONYMS - peptidyl-L-lysine [L-arginine]hydrolase activity SYNONYMS - protaminase activity SYNONYMS - tissue carboxypeptidase B // UNIQUE-ID - GO:0017039 TYPES - GO:0008239 COMMON-NAME - dipeptidyl-peptidase III activity SYNONYMS - dipeptidyl aminopeptidase III activity SYNONYMS - dipeptidyl arylamidase III activity SYNONYMS - DPP III activity SYNONYMS - enkephalinase B activity SYNONYMS - red cell angiotensinase activity // UNIQUE-ID - GO:0004530 TYPES - GO:0016888 COMMON-NAME - deoxyribonuclease I activity SYNONYMS - alkaline deoxyribonuclease activity SYNONYMS - alkaline DNase activity SYNONYMS - deoxyribonuclease (pancreatic) SYNONYMS - deoxyribonuclease A SYNONYMS - deoxyribonucleic phosphatase activity SYNONYMS - DNA depolymerase activity SYNONYMS - DNA endonuclease activity SYNONYMS - DNA nuclease activity SYNONYMS - DNAase activity SYNONYMS - DNase activity SYNONYMS - DNase I SYNONYMS - dornava SYNONYMS - dornavac SYNONYMS - endodeoxyribonuclease I SYNONYMS - Escherichia coli endonuclease I SYNONYMS - pancreatic deoxyribonuclease SYNONYMS - pancreatic DNase activity SYNONYMS - pancreatic dornase SYNONYMS - thymonuclease activity SYNONYMS - thymonuclease, dornase activity // UNIQUE-ID - GO:0004531 TYPES - GO:0016889 COMMON-NAME - deoxyribonuclease II activity SYNONYMS - acid deoxyribonuclease activity SYNONYMS - acid DNase activity SYNONYMS - deoxyribonucleate 3'-nucleotidohydrolase activity SYNONYMS - DNase II activity SYNONYMS - lysosomal DNase II activity SYNONYMS - pancreatic DNase II // UNIQUE-ID - GO:0004523 TYPES - GO:0016891 COMMON-NAME - ribonuclease H activity COMMENT - Note that the EC recommended name for this enzyme activity is 'calf thymus ribonuclease H', even though it is found in many species. SYNONYMS - calf thymus ribonuclease H activity SYNONYMS - endoribonuclease H SYNONYMS - endoribonuclease H (calf thymus) SYNONYMS - endoribonuclease0 H activity SYNONYMS - hybrid nuclease activity SYNONYMS - hybrid ribonuclease activity SYNONYMS - hybridase (ribonuclease H) SYNONYMS - hybridase activity SYNONYMS - ribonuclease H1 activity SYNONYMS - ribonuclease H2 activity SYNONYMS - ribonuclease H3 activity SYNONYMS - RNA*DNA hybrid ribonucleotidohydrolase activity SYNONYMS - RNase H activity SYNONYMS - RNase H1 activity SYNONYMS - RNase H2 activity SYNONYMS - RNase H3 activity // UNIQUE-ID - GO:0004525 TYPES - GO:0016891 COMMON-NAME - ribonuclease III activity SYNONYMS - pre-mRNA 3'-end processing endonuclease SYNONYMS - ribonuclease 3 activity SYNONYMS - RNase III activity // UNIQUE-ID - GO:0004522 TYPES - GO:0016892 COMMON-NAME - pancreatic ribonuclease activity SYNONYMS - alkaline ribonuclease activity SYNONYMS - ceratitis capitata alkaline ribonuclease activity SYNONYMS - endoribonuclease I SYNONYMS - gene S glycoproteins SYNONYMS - gene S locus-specific glycoproteins SYNONYMS - pancreatic RNase activity SYNONYMS - ribonuclease A SYNONYMS - ribonuclease I activity SYNONYMS - ribonucleate 3'-pyrimidino-oligonucleotidohydrolase activity SYNONYMS - ribonucleic phosphatase activity SYNONYMS - RNase A activity SYNONYMS - RNase activity SYNONYMS - RNase I activity SYNONYMS - S-genotype-asssocd. glycoproteins SYNONYMS - SLSG glycoproteins // UNIQUE-ID - GO:0008853 TYPES - GO:0016895 COMMON-NAME - exodeoxyribonuclease III activity SYNONYMS - E. coli exonuclease III activity SYNONYMS - E.coli exonuclease III SYNONYMS - endoribonuclease III SYNONYMS - Escherichia coli exonuclease III SYNONYMS - exonuclease III activity // UNIQUE-ID - GO:0004535 TYPES - GO:0016896 COMMON-NAME - poly(A)-specific ribonuclease activity SYNONYMS - 2',3'-exoribonuclease activity SYNONYMS - 3'-exoribonuclease activity SYNONYMS - poly(A)-specific RNase activity // UNIQUE-ID - GO:0004115 TYPES - GO:0004114 COMMON-NAME - 3',5'-cyclic-AMP phosphodiesterase activity SYNONYMS - 3',5' cAMP-specific phosphodiesterase activity SYNONYMS - 3',5'-cAMP-specific phosphodiesterase activity SYNONYMS - 3',5'-cyclic-AMP-specific phosphodiesterase activity SYNONYMS - adenosine 3',5'-cyclophosphate-specific phosphodiesterase activity SYNONYMS - cAMP-specific phosphodiesterase activity SYNONYMS - cyclic AMP-specific phosphodiesterase activity // UNIQUE-ID - GO:0004119 TYPES - GO:0004114 COMMON-NAME - cGMP-inhibited cyclic-nucleotide phosphodiesterase activity // UNIQUE-ID - GO:0047555 TYPES - GO:0004114 COMMON-NAME - 3',5'-cyclic-GMP phosphodiesterase activity SYNONYMS - 3',5' cyclic-GMP phosphodiesterase activity SYNONYMS - 3',5'-cyclic-GMP 5'-nucleotidohydrolase activity SYNONYMS - cGMP phosphodiesterase activity SYNONYMS - cGMP-PDE SYNONYMS - cGMP-specific phosphodiesterase activity SYNONYMS - cyclic 3',5'-GMP phosphodiesterase activity SYNONYMS - cyclic GMP phosphodiesterase activity SYNONYMS - cyclic guanosine 3',5'-monophosphate phosphodiesterase activity SYNONYMS - cyclic guanosine 3',5'-phosphate phosphodiesterase activity SYNONYMS - guanosine cyclic 3',5'-phosphate phosphodiesterase activity // UNIQUE-ID - GO:0004441 TYPES - GO:0016312 COMMON-NAME - inositol-1,4-bisphosphate 1-phosphatase activity SYNONYMS - 1D-myo-inositol-1,4-bisphosphate 1-phosphohydrolase activity SYNONYMS - inositol polyphosphate 1-phosphatase activity SYNONYMS - inositol-polyphosphate 1-phosphatase activity // UNIQUE-ID - GO:0004445 TYPES - GO:0046030 COMMON-NAME - inositol-polyphosphate 5-phosphatase activity SYNONYMS - 1D-myo-inositol-1,4,5-trisphosphate 5-phosphohydrolase activity SYNONYMS - 5PTase activity SYNONYMS - D-myo-inositol 1,4,5-triphosphate 5-phosphatase activity SYNONYMS - D-myo-inositol 1,4,5-trisphosphate 5-phosphatase activity SYNONYMS - D-myo-inositol(1,4,5)/(1,3,4,5)-polyphosphate 5-phosphatase activity SYNONYMS - inosine triphosphatase activity SYNONYMS - inositol 1,4,5-trisphosphate phosphatase activity SYNONYMS - inositol phosphate 5-phosphomonoesterase activity SYNONYMS - inositol polyphosphate-5-phosphatase activity SYNONYMS - inositol trisphosphate phosphomonoesterase activity SYNONYMS - inositol-1,4,5-trisphosphate 5-phosphatase activity SYNONYMS - inositol-1,4,5-trisphosphate/1,3,4,5-tetrakisphosphate 5-phosphatase activity SYNONYMS - Ins(1,4,5)P(3) 5-phosphatase activity SYNONYMS - Ins(1,4,5)P3 5-phosphatase activity SYNONYMS - Ins(1,4,5)P3/Ins(1,3,4,5)P4 5-phosphatase activity SYNONYMS - InsP(3)/Ins(1,3,4,5)P(4) 5-phosphatase activity SYNONYMS - InsP3/Ins(1,3,4,5)P4 5-phosphatase activity SYNONYMS - L-myo-inositol 1,4,5-trisphosphate-monoesterase activity SYNONYMS - myo-inositol-1,4,5-trisphosphate 5-phosphatase activity SYNONYMS - type I inositol-polyphosphate phosphatase activity // UNIQUE-ID - GO:0000163 TYPES - GO:0004722 COMMON-NAME - protein phosphatase type 1 activity SYNONYMS - protein phosphatase type 1, intrinsic catalyst activity // UNIQUE-ID - GO:0004724 TYPES - GO:0004722 COMMON-NAME - magnesium-dependent protein serine/threonine phosphatase activity // UNIQUE-ID - GO:0008420 TYPES - GO:0004722 COMMON-NAME - CTD phosphatase activity // UNIQUE-ID - GO:0015071 TYPES - GO:0004722 COMMON-NAME - protein phosphatase type 2C activity // UNIQUE-ID - GO:0004726 TYPES - GO:0004725 COMMON-NAME - non-membrane spanning protein tyrosine phosphatase activity // UNIQUE-ID - GO:0004727 TYPES - GO:0004725 COMMON-NAME - prenylated protein tyrosine phosphatase activity // UNIQUE-ID - GO:0008579 TYPES - GO:0008138 COMMON-NAME - JUN kinase phosphatase activity // UNIQUE-ID - GO:0017017 TYPES - GO:0008138 TYPES - GO:0033549 COMMON-NAME - MAP kinase tyrosine/serine/threonine phosphatase activity SYNONYMS - dual-specificity MAP kinase phosphatase activity // UNIQUE-ID - GO:0003678 TYPES - GO:0004386 COMMON-NAME - DNA helicase activity COMMENT - Consider also annotating to the molecular function term 'DNA binding ; GO:0003677'. // UNIQUE-ID - GO:0003724 TYPES - GO:0004386 COMMON-NAME - RNA helicase activity COMMENT - Consider also annotating to the molecular function term 'RNA binding ; GO:0003723'. // UNIQUE-ID - GO:0070035 TYPES - GO:0004386 COMMON-NAME - purine NTP-dependent helicase activity COMMENT - Consider also annotating to the molecular function term 'ATP binding ; GO:0005524'. // UNIQUE-ID - GO:0042623 TYPES - GO:0016887 COMMON-NAME - ATPase activity, coupled COMMENT - Consider also annotating to the molecular function term 'ATP binding ; GO:0005524'. SYNONYMS - ATP phosphohydrolase (polypeptide-unfolding) SYNONYMS - chaperonin SYNONYMS - chaperonin ATPase activity SYNONYMS - non-chaperonin molecular chaperone ATPase activity SYNONYMS - nucleoplasmin ATPase activity SYNONYMS - peroxisome-assembly ATPase activity // UNIQUE-ID - GO:0042624 TYPES - GO:0016887 COMMON-NAME - ATPase activity, uncoupled COMMENT - Consider also annotating to the molecular function term 'ATP binding ; GO:0005524'. SYNONYMS - adenylpyrophosphatase activity // UNIQUE-ID - GO:0004008 TYPES - GO:0043682 COMMON-NAME - copper-exporting ATPase activity COMMENT - Consider also annotating to the molecular function term 'ATP binding ; GO:0005524'. SYNONYMS - ATP phosphohydrolase (Cu2+-exporting) SYNONYMS - copper exporting ATPase activity SYNONYMS - copper-translocating P-type ATPase activity SYNONYMS - Cu(2+)-exporting ATPase activity SYNONYMS - Cu2+-exporting ATPase activity SYNONYMS - cu2+-exporting ATPase activity // UNIQUE-ID - GO:0005247 TYPES - GO:0005254 TYPES - GO:0008308 COMMON-NAME - voltage-gated chloride channel activity SYNONYMS - voltage gated chloride channel activity SYNONYMS - voltage-dependent chloride channel activity // UNIQUE-ID - GO:0005245 TYPES - GO:0005262 TYPES - GO:0022843 COMMON-NAME - voltage-gated calcium channel activity SYNONYMS - depolarisation-activated calcium channel SYNONYMS - depolarisation-activated voltage-gated calcium channel SYNONYMS - depolarization-activated calcium channel SYNONYMS - depolarization-activated voltage gated calcium channel activity SYNONYMS - depolarization-activated voltage-gated calcium channel activity SYNONYMS - voltage gated calcium channel activity SYNONYMS - voltage-dependent calcium channel activity SYNONYMS - voltage-gated calcium ion channel activity SYNONYMS - voltage-sensitive calcium channel // UNIQUE-ID - GO:0005248 TYPES - GO:0005272 TYPES - GO:0022843 COMMON-NAME - voltage-gated sodium channel activity SYNONYMS - voltage gated sodium channel activity SYNONYMS - voltage-dependent sodium channel activity SYNONYMS - voltage-gated sodium ion channel activity SYNONYMS - voltage-sensitive sodium channel // UNIQUE-ID - GO:0005249 TYPES - GO:0005267 TYPES - GO:0022843 COMMON-NAME - voltage-gated potassium channel activity SYNONYMS - voltage gated potassium channel activity SYNONYMS - voltage-dependent potassium channel activity SYNONYMS - voltage-gated potassium ion channel activity SYNONYMS - voltage-sensitive potassium channel // UNIQUE-ID - GO:0030171 TYPES - GO:0022843 COMMON-NAME - voltage-gated proton channel activity SYNONYMS - voltage gated proton channel activity SYNONYMS - voltage-dependent proton channel activity // UNIQUE-ID - GO:0005218 TYPES - GO:0005217 TYPES - GO:0015278 COMMON-NAME - intracellular ligand-gated calcium channel activity // UNIQUE-ID - GO:0005220 TYPES - GO:0005217 TYPES - GO:0015278 COMMON-NAME - inositol 1,4,5-triphosphate-sensitive calcium-release channel activity // UNIQUE-ID - GO:0005223 TYPES - GO:0005221 COMMON-NAME - intracellular cGMP activated cation channel activity // UNIQUE-ID - GO:0005231 TYPES - GO:0005230 COMMON-NAME - excitatory extracellular ligand-gated ion channel activity // UNIQUE-ID - GO:0005237 TYPES - GO:0005230 COMMON-NAME - inhibitory extracellular ligand-gated ion channel activity // UNIQUE-ID - GO:0016934 TYPES - GO:0005254 TYPES - GO:0016933 COMMON-NAME - extracellular-glycine-gated chloride channel activity SYNONYMS - glycine receptor // UNIQUE-ID - GO:0004891 TYPES - GO:0005237 TYPES - GO:0005254 COMMON-NAME - glycine-inhibited chloride channel activity COMMENT - Note that this term represents an activity and not a gene product. Consider also annotating to the molecular function term 'receptor activity ; GO:0004872'. // UNIQUE-ID - GO:0016286 TYPES - GO:0015269 COMMON-NAME - small conductance calcium-activated potassium channel activity SYNONYMS - SK calcium-activated potassium channel activity SYNONYMS - SK KCa channels SYNONYMS - small conductance KCa channels // UNIQUE-ID - GO:0005403 TYPES - GO:0005402 TYPES - GO:0015295 COMMON-NAME - hydrogen:sugar symporter activity SYNONYMS - cation/sugar symporter activity SYNONYMS - hydrogen:sugar transporter activity SYNONYMS - proton:sugar symporter activity // UNIQUE-ID - GO:0009679 TYPES - GO:0005403 TYPES - GO:0015149 COMMON-NAME - hexose:hydrogen symporter activity SYNONYMS - hexose:proton symporter // UNIQUE-ID - GO:0008507 TYPES - GO:0015373 COMMON-NAME - sodium:iodide symporter activity SYNONYMS - sodium/iodide symporter // UNIQUE-ID - GO:0015379 TYPES - GO:0015377 COMMON-NAME - potassium:chloride symporter activity // UNIQUE-ID - GO:0005412 TYPES - GO:0005355 TYPES - GO:0015370 COMMON-NAME - glucose:sodium symporter activity SYNONYMS - sodium/glucose symporter // UNIQUE-ID - GO:0008520 TYPES - GO:0015370 COMMON-NAME - L-ascorbate:sodium symporter activity SYNONYMS - sodium-dependent L-ascorbic acid transporter // UNIQUE-ID - GO:0005451 TYPES - GO:0015078 TYPES - GO:0015491 COMMON-NAME - monovalent cation:proton antiporter activity // UNIQUE-ID - GO:0015368 TYPES - GO:0015491 COMMON-NAME - calcium:cation antiporter activity // UNIQUE-ID - GO:0005452 TYPES - GO:0015380 COMMON-NAME - inorganic anion exchanger activity // UNIQUE-ID - GO:0005313 TYPES - GO:0015172 TYPES - GO:0015179 COMMON-NAME - L-glutamate transmembrane transporter activity SYNONYMS - glutamate/aspartate porter activity SYNONYMS - glutamate/aspartate:sodium symporter activity SYNONYMS - L-glutamate transporter activity // UNIQUE-ID - GO:0005302 TYPES - GO:0015173 TYPES - GO:0015179 COMMON-NAME - L-tyrosine transmembrane transporter activity SYNONYMS - L-tyrosine permease activity SYNONYMS - L-tyrosine transporter activity SYNONYMS - valine/tyrosine/tryptophan permease activity // UNIQUE-ID - GO:0005290 TYPES - GO:0015174 TYPES - GO:0015179 COMMON-NAME - L-histidine transmembrane transporter activity SYNONYMS - histidine/arginine/lysine/ornithine porter activity SYNONYMS - L-histidine transporter activity // UNIQUE-ID - GO:0015181 TYPES - GO:0015174 TYPES - GO:0015179 COMMON-NAME - arginine transmembrane transporter activity SYNONYMS - arginine permease activity SYNONYMS - histidine/arginine/lysine/ornithine porter activity SYNONYMS - L-arginine transporter activity // UNIQUE-ID - GO:0015186 TYPES - GO:0015174 TYPES - GO:0015179 COMMON-NAME - L-glutamine transmembrane transporter activity SYNONYMS - asparagine/glutamine permease activity // UNIQUE-ID - GO:0015189 TYPES - GO:0015174 TYPES - GO:0015179 COMMON-NAME - L-lysine transmembrane transporter activity SYNONYMS - histidine/arginine/lysine/ornithine porter activity SYNONYMS - L-lysine permease SYNONYMS - lysine permease activity // UNIQUE-ID - GO:0015180 TYPES - GO:0015175 TYPES - GO:0015179 TYPES - GO:0022858 COMMON-NAME - L-alanine transmembrane transporter activity SYNONYMS - L-alanine transporter activity // UNIQUE-ID - GO:0015187 TYPES - GO:0015175 COMMON-NAME - glycine transmembrane transporter activity SYNONYMS - glycine betaine/proline porter activity SYNONYMS - glycine transporter activity SYNONYMS - proline/glycine/betaine:hydrogen/sodium symporter activity // UNIQUE-ID - GO:0015185 TYPES - GO:0015179 COMMON-NAME - L-gamma-aminobutyric acid transmembrane transporter activity SYNONYMS - 4-aminobutanoate transporter activity SYNONYMS - 4-aminobutyrate transporter activity SYNONYMS - betaine/GABA:sodium symporter activity SYNONYMS - GABA transporter activity SYNONYMS - L-gamma-aminobutyrate transporter activity SYNONYMS - L-gamma-aminobutyric acid transporter activity // UNIQUE-ID - GO:0015078 TYPES - GO:0015077 COMMON-NAME - hydrogen ion transmembrane transporter activity SYNONYMS - proton transporter // UNIQUE-ID - GO:0005375 TYPES - GO:0015082 TYPES - GO:0046915 COMMON-NAME - copper ion transmembrane transporter activity SYNONYMS - intracellular copper ion transporter SYNONYMS - plasma membrane copper transporter // UNIQUE-ID - GO:0005381 TYPES - GO:0015082 TYPES - GO:0046915 COMMON-NAME - iron ion transmembrane transporter activity SYNONYMS - iron transporter SYNONYMS - multicopper ferroxidase iron transport mediator activity SYNONYMS - transmembrane iron ion permease activity SYNONYMS - transmembrane iron permease activity SYNONYMS - zinc, iron permease activity // UNIQUE-ID - GO:0015087 TYPES - GO:0015082 TYPES - GO:0046915 COMMON-NAME - cobalt ion transmembrane transporter activity SYNONYMS - cobalt, zinc uptake permease activity SYNONYMS - zinc, cadmium, cobalt, nickel, lead-efflux ATPase activity // UNIQUE-ID - GO:0015097 TYPES - GO:0015082 TYPES - GO:0046915 COMMON-NAME - mercury ion transmembrane transporter activity // UNIQUE-ID - GO:0015321 TYPES - GO:0015114 COMMON-NAME - sodium-dependent phosphate transmembrane transporter activity // UNIQUE-ID - GO:0005353 TYPES - GO:0015149 COMMON-NAME - fructose transmembrane transporter activity SYNONYMS - fructose permease activity SYNONYMS - fructose porter activity // UNIQUE-ID - GO:0005354 TYPES - GO:0015149 COMMON-NAME - galactose transmembrane transporter activity SYNONYMS - galactose/glucose (methylgalactoside) porter activity // UNIQUE-ID - GO:0005355 TYPES - GO:0015149 COMMON-NAME - glucose transmembrane transporter activity SYNONYMS - galactose/glucose (methylgalactoside) porter activity SYNONYMS - glucose permease activity SYNONYMS - lactose/glucose efflux transporter activity // UNIQUE-ID - GO:0015578 TYPES - GO:0015149 COMMON-NAME - mannose transmembrane transporter activity SYNONYMS - mannose permease activity // UNIQUE-ID - GO:0048365 TYPES - GO:0017048 COMMON-NAME - Rac GTPase binding // UNIQUE-ID - GO:0015056 TYPES - GO:0001636 COMMON-NAME - corticotrophin-releasing factor receptor activity // UNIQUE-ID - GO:0009161 TYPES - GO:0009123 TYPES - GO:0009259 COMMON-NAME - ribonucleoside monophosphate metabolic process // UNIQUE-ID - GO:0009394 TYPES - GO:0009262 COMMON-NAME - 2'-deoxyribonucleotide metabolic process // UNIQUE-ID - TAX-78536 TYPES - TAX-58023 COMMON-NAME - Euphyllophyta // UNIQUE-ID - TAX-33511 TYPES - TAX-33316 COMMON-NAME - Deuterostomia // UNIQUE-ID - BC-3.1.2.4.1 TYPES - BC-3.1.2.4 COMMON-NAME - more than one signal needed // UNIQUE-ID - BC-3.1.2.4.2 TYPES - BC-3.1.2.4 COMMON-NAME - regulons or multilayer component regulatory systems // UNIQUE-ID - BC-3.1.2.4.3 TYPES - BC-3.1.2.4 COMMON-NAME - two component regulatory systems (external signal) // UNIQUE-ID - BC-3.1.2.4.4 TYPES - BC-3.1.2.4 COMMON-NAME - quorum sensing // UNIQUE-ID - BC-4.3.A.1.a TYPES - BC-4.3.A.1 COMMON-NAME - ABC superfamily ATP binding cytoplasmic component // UNIQUE-ID - BC-4.3.A.1.am TYPES - BC-4.3.A.1 COMMON-NAME - ABC superfamily, ATP binding and membrane component // UNIQUE-ID - BC-4.3.A.1.m TYPES - BC-4.3.A.1 COMMON-NAME - ABC superfamily, membrane component // UNIQUE-ID - BC-4.3.A.1.p TYPES - BC-4.3.A.1 COMMON-NAME - ABC superfamily, periplasmic binding component // UNIQUE-ID - D-Galactosaminides TYPES - Hexosaminides COMMON-NAME - a D-galactosaminide // UNIQUE-ID - D-Glucosaminides TYPES - Hexosaminides COMMON-NAME - a D-glucosaminide // UNIQUE-ID - N-Acetyl-D-Hexosaminides TYPES - Hexosaminides COMMON-NAME - an N-acetyl-D-hexosaminide // UNIQUE-ID - D-Fructopyranose TYPES - FRU COMMON-NAME - D-fructopyranose // UNIQUE-ID - Fructofuranose TYPES - FRU COMMON-NAME - D-fructofuranose // UNIQUE-ID - L-Fructofuranose TYPES - L-Fructose COMMON-NAME - L-fructofuranose // UNIQUE-ID - D-arabinofuranose TYPES - D-ARABINOSE // UNIQUE-ID - D-arabinopyranose TYPES - D-ARABINOSE // UNIQUE-ID - L-arabinofuranose TYPES - L-ARABINOSE // UNIQUE-ID - L-arabinopyranose TYPES - L-ARABINOSE // UNIQUE-ID - Flavonol-3-O-L-Rham-16-D-Glus TYPES - Flavonol-3-O-B-D-Glucosides COMMON-NAME - a flavonol 3-O-[β-L-rhamnosyl-(1->6)-β-D-glucoside] // UNIQUE-ID - Flavonol-cumaroyl-glucosides TYPES - Flavonol-3-O-B-D-Glucosides COMMON-NAME - a flavonol 3-O-(6-(4-coumaroyl)-β-D glucosyl-(1->2)-β-D-glucosyl-(1->2)-β-D-glucoside) // UNIQUE-ID - Flavonol-glucosyl-glucosides TYPES - Flavonol-3-O-B-D-Glucosides COMMON-NAME - a flavonol 3-O β-D-glucosyl-(1->2)-β-D-glucoside // UNIQUE-ID - Flavonol-glucosyl-glucosyl-glucosides TYPES - Flavonol-3-O-B-D-Glucosides COMMON-NAME - a flavonol 3-O-(β-D-glucosyl-(1->2)-β-D-glucosyl (1->2)-β-D-glucoside) // UNIQUE-ID - GO:0004402 TYPES - GO:0004468 COMMON-NAME - histone acetyltransferase activity COMMENT - Note that the term 'histone lysine acetyltransferase activity ; GO:0046971' was merged into this term because only lysine residues are ever acetylated in histones, and so the term was redundant. SYNONYMS - acetyl-CoA:histone acetyltransferase activity SYNONYMS - histone acetokinase activity SYNONYMS - histone acetylase activity SYNONYMS - histone lysine acetyltransferase activity SYNONYMS - histone transacetylase activity SYNONYMS - nucleosome-histone acetyltransferase activity // UNIQUE-ID - GO:0017018 TYPES - GO:0000163 COMMON-NAME - myosin phosphatase activity SYNONYMS - myosin phosphatase myosin binding SYNONYMS - myosin phosphatase, intrinsic catalyst activity // UNIQUE-ID - GO:0004003 TYPES - GO:0003678 TYPES - GO:0008026 TYPES - GO:0008094 COMMON-NAME - ATP-dependent DNA helicase activity COMMENT - Consider also annotating to the molecular function term 'ATP binding ; GO:0005524'. // UNIQUE-ID - GO:0004004 TYPES - GO:0003724 TYPES - GO:0008026 TYPES - GO:0008186 COMMON-NAME - ATP-dependent RNA helicase activity COMMENT - Consider also annotating to the molecular function term 'ATP binding ; GO:0005524'. // UNIQUE-ID - GO:0008026 TYPES - GO:0042623 TYPES - GO:0070035 COMMON-NAME - ATP-dependent helicase activity COMMENT - Consider also annotating to the molecular function term 'ATP binding ; GO:0005524'. // UNIQUE-ID - GO:0008094 TYPES - GO:0042623 COMMON-NAME - DNA-dependent ATPase activity COMMENT - Consider also annotating to the molecular function term 'ATP binding ; GO:0005524'. SYNONYMS - adenosinetriphosphatase (DNA-dependent) SYNONYMS - DNA dependent ATPase activity SYNONYMS - DNA-dependent adenosinetriphosphatase activity // UNIQUE-ID - GO:0008186 TYPES - GO:0042623 COMMON-NAME - RNA-dependent ATPase activity COMMENT - Consider also annotating to the molecular function term 'ATP binding ; GO:0005524'. SYNONYMS - RNA-dependent adenosinetriphosphatase activity // UNIQUE-ID - GO:0008568 TYPES - GO:0042623 COMMON-NAME - microtubule-severing ATPase activity COMMENT - See also the cellular component term 'katanin complex ; GO:0008352'. Consider also annotating to the molecular function term 'ATP binding ; GO:0005524'. SYNONYMS - ATP phosphohydrolase (tubulin-dimerizing) SYNONYMS - katanin activity // UNIQUE-ID - GO:0030898 TYPES - GO:0042623 COMMON-NAME - actin-dependent ATPase activity COMMENT - Consider also annotating to the molecular function term 'ATP binding ; GO:0005524'. SYNONYMS - actin-activated ATPase activity // UNIQUE-ID - GO:0043492 TYPES - GO:0042623 COMMON-NAME - ATPase activity, coupled to movement of substances // UNIQUE-ID - GO:0008331 TYPES - GO:0005245 COMMON-NAME - high voltage-gated calcium channel activity SYNONYMS - high voltage gated calcium channel activity SYNONYMS - high voltage-dependent calcium channel activity // UNIQUE-ID - GO:0008332 TYPES - GO:0005245 COMMON-NAME - low voltage-gated calcium channel activity SYNONYMS - low voltage gated calcium channel activity SYNONYMS - low voltage-dependent calcium channel activity SYNONYMS - T-type channel // UNIQUE-ID - GO:0015270 TYPES - GO:0005245 COMMON-NAME - dihydropyridine-sensitive calcium channel activity // UNIQUE-ID - GO:0005242 TYPES - GO:0005249 COMMON-NAME - inward rectifier potassium channel activity // UNIQUE-ID - GO:0005251 TYPES - GO:0005249 COMMON-NAME - delayed rectifier potassium channel activity // UNIQUE-ID - GO:0005219 TYPES - GO:0005218 COMMON-NAME - ryanodine-sensitive calcium-release channel activity SYNONYMS - caffeine-sensitive calcium-release channel SYNONYMS - ryanodine receptor // UNIQUE-ID - GO:0005234 TYPES - GO:0005231 COMMON-NAME - extracellular-glutamate-gated ion channel activity COMMENT - Note that this term represents an activity and not a gene product. Consider also annotating to the molecular function term 'glutamate receptor activity ; GO:0008066'. // UNIQUE-ID - GO:0016933 TYPES - GO:0005231 COMMON-NAME - extracellular-glycine-gated ion channel activity SYNONYMS - glycine receptor // UNIQUE-ID - GO:0005356 TYPES - GO:0005355 TYPES - GO:0009679 COMMON-NAME - hydrogen:glucose symporter activity SYNONYMS - hydrogen:glucose transporter activity // UNIQUE-ID - GO:0015385 TYPES - GO:0005451 COMMON-NAME - sodium:hydrogen antiporter activity SYNONYMS - pH-dependent sodium:hydrogen antiporter activity SYNONYMS - pH-dependent sodium:proton antiporter SYNONYMS - sodium/hydrogen antiporter SYNONYMS - sodium:hydrogen exchange activity SYNONYMS - sodium:hydrogen exchanger SYNONYMS - sodium:proton antiporter // UNIQUE-ID - GO:0005432 TYPES - GO:0015368 COMMON-NAME - calcium:sodium antiporter activity SYNONYMS - mitochondrial sodium/calcium ion exchange SYNONYMS - sodium/calcium exchanger SYNONYMS - sodium:calcium exchange // UNIQUE-ID - GO:0008273 TYPES - GO:0015368 COMMON-NAME - calcium, potassium:sodium antiporter activity SYNONYMS - potassium-dependent sodium/calcium exchanger // UNIQUE-ID - GO:0046933 TYPES - GO:0015078 COMMON-NAME - hydrogen ion transporting ATP synthase activity, rotational mechanism SYNONYMS - H+-transporting ATP synthase activity SYNONYMS - hydrogen ion translocating F-type ATPase activity SYNONYMS - hydrogen ion transporting two-sector ATPase activity // UNIQUE-ID - TAX-58024 TYPES - TAX-78536 COMMON-NAME - Spermatophyta SYNONYMS - seed plants // UNIQUE-ID - TAX-7711 TYPES - TAX-33511 COMMON-NAME - Chordata SYNONYMS - chordates // UNIQUE-ID - BETA-ACETYLGLUCOSAMINIDE TYPES - N-Acetyl-D-Hexosaminides COMMON-NAME - an N-acetyl-β-D-glucosaminide SYNONYMS - a β-acetylglucosaminide // UNIQUE-ID - N-ACETYL-D-GALACTOSALAMINYL-R TYPES - N-Acetyl-D-Hexosaminides COMMON-NAME - an N-acetyl-β-D-galactosaminide SYNONYMS - an N-acetyl-D-galactosalaminyl-R // UNIQUE-ID - GO:0004406 TYPES - GO:0004402 COMMON-NAME - H3/H4 histone acetyltransferase activity // UNIQUE-ID - GO:0017116 TYPES - GO:0004003 TYPES - GO:0043142 COMMON-NAME - single-stranded DNA-dependent ATP-dependent DNA helicase activity COMMENT - Consider also annotating to the molecular function term 'ATP binding ; GO:0005524'. // UNIQUE-ID - GO:0043142 TYPES - GO:0008094 COMMON-NAME - single-stranded DNA-dependent ATPase activity COMMENT - Consider also annotating to the molecular function term 'ATP binding ; GO:0005524'. SYNONYMS - ssDNA-dependent ATPase activity // UNIQUE-ID - GO:0015272 TYPES - GO:0005242 COMMON-NAME - ATP-activated inward rectifier potassium channel activity // UNIQUE-ID - GO:0015467 TYPES - GO:0005242 COMMON-NAME - G-protein activated inward rectifier potassium channel activity SYNONYMS - G protein activated inward rectifier potassium channel activity SYNONYMS - G-protein-activated inward rectifier potassium channel activity // UNIQUE-ID - GO:0005360 TYPES - GO:0005356 COMMON-NAME - insulin-responsive hydrogen:glucose symporter activity SYNONYMS - insulin-responsive hydrogen:glucose transporter activity SYNONYMS - transepithelial hydrogen/glucose transporter // UNIQUE-ID - TAX-3398 TYPES - TAX-58024 COMMON-NAME - Magnoliophyta SYNONYMS - flowering plants SYNONYMS - angiosperms SYNONYMS - Angiospermae // UNIQUE-ID - TAX-89593 TYPES - TAX-7711 COMMON-NAME - Craniata // UNIQUE-ID - TAX-7742 TYPES - TAX-89593 COMMON-NAME - Vertebrata SYNONYMS - vertebrates // UNIQUE-ID - TAX-7776 TYPES - TAX-7742 COMMON-NAME - Gnathostomata SYNONYMS - jawed vertebrates // UNIQUE-ID - TAX-117570 TYPES - TAX-7776 COMMON-NAME - Teleostomi // UNIQUE-ID - TAX-117571 TYPES - TAX-117570 COMMON-NAME - Euteleostomi SYNONYMS - bony vertebrates // UNIQUE-ID - TAX-8287 TYPES - TAX-117571 COMMON-NAME - Sarcopterygii // UNIQUE-ID - TAX-32523 TYPES - TAX-8287 COMMON-NAME - Tetrapoda SYNONYMS - tetrapods // UNIQUE-ID - TAX-32524 TYPES - TAX-32523 COMMON-NAME - Amniota SYNONYMS - amniotes // UNIQUE-ID - TAX-40674 TYPES - TAX-32524 COMMON-NAME - Mammalia SYNONYMS - mammals // UNIQUE-ID - TAX-32525 TYPES - TAX-40674 COMMON-NAME - Theria // UNIQUE-ID - TAX-9347 TYPES - TAX-32525 COMMON-NAME - Eutheria SYNONYMS - placentals SYNONYMS - placental mammals SYNONYMS - eutherian mammals SYNONYMS - Placentalia // UNIQUE-ID - TAX-314146 TYPES - TAX-9347 COMMON-NAME - Euarchontoglires // UNIQUE-ID - TAX-314147 TYPES - TAX-314146 COMMON-NAME - Glires SYNONYMS - Rodents and rabbits // UNIQUE-ID - TAX-9989 TYPES - TAX-314147 COMMON-NAME - Rodentia SYNONYMS - rodents // UNIQUE-ID - TAX-33553 TYPES - TAX-9989 COMMON-NAME - Sciurognathi // UNIQUE-ID - TAX-337687 TYPES - TAX-33553 COMMON-NAME - Muroidea // UNIQUE-ID - TAX-10066 TYPES - TAX-337687 COMMON-NAME - Muridae // UNIQUE-ID - TAX-39107 TYPES - TAX-10066 COMMON-NAME - Murinae // UNIQUE-ID - TAX-10088 TYPES - TAX-39107 COMMON-NAME - Mus SYNONYMS - mice SYNONYMS - Nannomys // UNIQUE-ID - TAX-10090 TYPES - TAX-10088 COMMON-NAME - Mus musculus SYNONYMS - mouse SYNONYMS - house mouse //