Compare GO annotations for TF317819 TreeFam Mouse-Dicot objects

Compare GO annotations for TF317819 Mouse-Dicot objects

Possible outliers might be spotted in a summary/comparison table of high level GO categories.
Complete table of the annotations represented in this image is provided below.

Annotations are indicated by colored nodes: human, mouse, rat, chicken, zfish, fly, worm, dicty, dicot, yeast, pombe, ecoli.
Gray arrows indicate "is_a"; Blue arrows indicate "part_of"; Red arrows indicate "regulates"
GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Chicken from GOA; Zfish from Zfin; Fly from Flybase; Worm from Wormbase; Dicot from TAIR; Dicty from Dictybase; Yeast from SGD; Pombe from Sanger; Ecoli from EcoliHub.
Organisms with experimental annotations are indicated: IC, IDA, IEP, IGI, IMP, IPI. In addition, ISS annotations are so indicated.
Does not include evidence codes: IEA, IGC, NAS, ND, NR, RCA, TAS.
Graph is also available as SVG (requires viewer plug-in from Adobe)
Evidence codes are listed at the bottom of the page.
Graph generated Tue Jul 22 12:24:21 2008.

Compare annotations to GO categories for TF317819.

Entry indicates that ortholog exists for this gene.
Colored entries indicate experimental annotation.
Parentheses indicate ISS annotation only.

Category	ID	Term	Human	Mouse	Rat	Chicken	Zfish	Fly	Worm	Dicty	Dicot	Yeast	Pombe	Ecoli
Molecular Function	GO:0005488	binding	X	Mouse	X	X	X	X	X	X	Dicot	X	X	X
Molecular Function	GO:0030528	transcription regulator activity	X	Mouse	X	X	X	X	X	X	Dicot	X	X	X
Cellular Component	GO:0005623	cell	X	Mouse	X	X	X	X	X	X	Dicot	X	X	X
Cellular Component	GO:0044464	cell part	X	Mouse	X	X	X	X	X	X	Dicot	X	X	X
Cellular Component	GO:0032991	macromolecular complex	X	Mouse	X	X	X	X	X	X	Dicot	X	X	X
Cellular Component	GO:0031974	membrane-enclosed lumen	X	Mouse	X	X	X	X	X	X	Dicot	X	X	X
Cellular Component	GO:0043226	organelle	X	Mouse	X	X	X	X	X	X	Dicot	X	X	X
Cellular Component	GO:0044422	organelle part	X	Mouse	X	X	X	X	X	X	Dicot	X	X	X
Biological Process	GO:0065007	biological regulation	X	Mouse	X	X	X	X	X	X	Dicot	X	X	X
Biological Process	GO:0009987	cellular process	X	Mouse	X	X	X	X	X	X	Dicot	X	X	X
Biological Process	GO:0032502	developmental process	X	Mouse	X	X	X	X	X	X	Dicot	X	X	X
Biological Process	GO:0002376	immune system process	X	Mouse	X	X	X	X	X	X	Dicot	X	X	X
Biological Process	GO:0008152	metabolic process	X	Mouse	X	X	X	X	X	X	Dicot	X	X	X
Biological Process	GO:0032501	multicellular organismal process	X	Mouse	X	X	X	X	X	X	Dicot	X	X	X
Biological Process	GO:0048518	positive regulation of biological process	X	Mouse	X	X	X	X	X	X	Dicot	X	X	X
Biological Process	GO:0050789	regulation of biological process	X	Mouse	X	X	X	X	X	X	Dicot	X	X	X
Biological Process	GO:0000003	reproduction	X	Mouse	X	X	X	X	X	X	Dicot	X	X	X
Biological Process	GO:0022414	reproductive process	X	Mouse	X	X	X	X	X	X	Dicot	X	X	X
Biological Process	GO:0050896	response to stimulus	X	Mouse	X	X	X	X	X	X	Dicot	X	X	X

Mouse-Dicot GO experimental annotations for TF317819

Category	ID	Term	DB Object	Evidence	With_From	Organism	Reference
Molecular Function	GO:0003682	chromatin binding	Hoxd10	IDA		Mouse	MGI:MGI:3629247\|PMID:16672333
Molecular Function	GO:0003677	DNA binding	Hoxd10	IDA		Mouse	MGI:MGI:893284\|PMID:1756725
Molecular Function	GO:0003677	DNA binding	Hoxd9	IDA		Mouse	MGI:MGI:893284\|PMID:1756725
Molecular Function	GO:0005515	protein binding	Hoxa10	IPI	UniProtKB:O88513	Mouse	MGI:MGI:3038045\|PMID:14973489
Molecular Function	GO:0005515	protein binding	Hoxa9	IPI	UniProt:P45481	Mouse	MGI:MGI:3032461\|PMID:15161102
Molecular Function	GO:0005515	protein binding	Hoxa9	IPI	UniProt:Q60954	Mouse	MGI:MGI:1098387\|PMID:9343407
Molecular Function	GO:0005515	protein binding	Hoxc9	IPI	UniProtKB:O88513	Mouse	MGI:MGI:3038045\|PMID:14973489
Molecular Function	GO:0005515	protein binding	Hoxd10	IPI	UniProtKB:O88513	Mouse	MGI:MGI:3038045\|PMID:14973489
Molecular Function	GO:0005515	protein binding	AT4G25530	IPI	AGI_LocusCode:AT1G65480	Dicot	TAIR:Publication:501720527\|PMID:17189287
Molecular Function	GO:0042803	protein homodimerization activity	AT4G25530	IPI	AGI_LocusCode:AT4G25530	Dicot	TAIR:Publication:501720527\|PMID:17189287
Molecular Function	GO:0003700	transcription factor activity	Hoxd10	IDA		Mouse	MGI:MGI:893284\|PMID:1756725
Molecular Function	GO:0003700	transcription factor activity	Hoxd9	IDA		Mouse	MGI:MGI:893284\|PMID:1756725
Cellular Component	GO:0005737	cytoplasm	Hoxa9	IDA		Mouse	MGI:MGI:3032461\|PMID:15161102
Cellular Component	GO:0005634	nucleus	Hoxa9	IDA		Mouse	MGI:MGI:3032461\|PMID:15161102
Cellular Component	GO:0005634	nucleus	Hoxd9	IDA		Mouse	MGI:MGI:58332\|PMID:2568311
Cellular Component	GO:0005634	nucleus	AT4G25530	IDA		Dicot	TAIR:Publication:501711384\|PMID:14631047
Cellular Component	GO:0005667	transcription factor complex	Hoxa10	IDA		Mouse	MGI:MGI:1098387\|PMID:9343407
Cellular Component	GO:0005667	transcription factor complex	Hoxa9	IDA		Mouse	MGI:MGI:1098387\|PMID:9343407
Biological Process	GO:0008344	adult locomotory behavior	Hoxd10	IGI	MGI:MGI:96210	Mouse	MGI:MGI:1350864\|PMID:10642795
Biological Process	GO:0008344	adult locomotory behavior	Hoxd9	IGI	MGI:MGI:96202	Mouse	MGI:MGI:1350864\|PMID:10642795
Biological Process	GO:0009952	anterior/posterior pattern formation	Hoxa10	IGI	MGI:MGI:96192\|MGI:MGI:96202	Mouse	MGI:MGI:2667742\|PMID:12869760
Biological Process	GO:0009952	anterior/posterior pattern formation	Hoxa9	IGI	MGI:MGI:96190\|MGI:MGI:96199\|MGI:MGI:96210	Mouse	MGI:MGI:3720535\|PMID:17626057
Biological Process	GO:0009952	anterior/posterior pattern formation	Hoxa9	IGI	MGI:MGI:96190	Mouse	MGI:MGI:85243\|PMID:9013929
Biological Process	GO:0009952	anterior/posterior pattern formation	Hoxa9	IMP	MGI:MGI:2150411	Mouse	MGI:MGI:78984\|PMID:8625797
Biological Process	GO:0009952	anterior/posterior pattern formation	Hoxa9	IGI	MGI:MGI:96210	Mouse	MGI:MGI:78984\|PMID:8625797
Biological Process	GO:0009952	anterior/posterior pattern formation	Hoxb9	IGI	MGI:MGI:96180\|MGI:MGI:96199\|MGI:MGI:96210	Mouse	MGI:MGI:3720535\|PMID:17626057
Biological Process	GO:0009952	anterior/posterior pattern formation	Hoxb9	IGI	MGI:MGI:96180	Mouse	MGI:MGI:85243\|PMID:9013929
Biological Process	GO:0009952	anterior/posterior pattern formation	Hoxb9	IMP	MGI:MGI:2150429	Mouse	MGI:MGI:85243\|PMID:9013929
Biological Process	GO:0009952	anterior/posterior pattern formation	Hoxb9	IGI	MGI:MGI:96183\|MGI:MGI:96184\|MGI:MGI:96185\|MGI:MGI:96186\|MGI:MGI:96187\|MGI:MGI:96188\|MGI:MGI:96189\|MGI:MGI:96182	Mouse	MGI:MGI:1859107\|PMID:10885747
Biological Process	GO:0009952	anterior/posterior pattern formation	Hoxc10	IGI	MGI:MGI:96171\|MGI:MGI:96202	Mouse	MGI:MGI:2667742\|PMID:12869760
Biological Process	GO:0009952	anterior/posterior pattern formation	Hoxc9	IGI	MGI:MGI:96180\|MGI:MGI:96190\|MGI:MGI:96210	Mouse	MGI:MGI:3720535\|PMID:17626057
Biological Process	GO:0009952	anterior/posterior pattern formation	Hoxc9	IMP	MGI:MGI:2150685	Mouse	MGI:MGI:73980\|PMID:7547473
Biological Process	GO:0009952	anterior/posterior pattern formation	Hoxd10	IGI	MGI:MGI:96192\|MGI:MGI:96171	Mouse	MGI:MGI:2667742\|PMID:12869760
Biological Process	GO:0009952	anterior/posterior pattern formation	Hoxd10	IGI	MGI:MGI:96210	Mouse	MGI:MGI:1350864\|PMID:10642795
Biological Process	GO:0009952	anterior/posterior pattern formation	Hoxd9	IGI	MGI:MGI:96180\|MGI:MGI:96190\|MGI:MGI:96199	Mouse	MGI:MGI:3720535\|PMID:17626057
Biological Process	GO:0009952	anterior/posterior pattern formation	Hoxd9	IMP	MGI:MGI:2150414	Mouse	MGI:MGI:78984\|PMID:8625797
Biological Process	GO:0009952	anterior/posterior pattern formation	Hoxd9	IGI	MGI:MGI:96180	Mouse	MGI:MGI:78984\|PMID:8625797
Biological Process	GO:0009952	anterior/posterior pattern formation	Hoxd9	IGI	MGI:MGI:96202	Mouse	MGI:MGI:1350864\|PMID:10642795
Biological Process	GO:0060216	definitive hemopoiesis	Hoxa9	IGI	MGI:MGI:96184\|MGI:MGI:96185	Mouse	MGI:MGI:3761081\|PMID:17761289
Biological Process	GO:0035115	embryonic forelimb morphogenesis	Hoxa9	IGI	MGI:MGI:96210	Mouse	MGI:MGI:78984\|PMID:8625797
Biological Process	GO:0035115	embryonic forelimb morphogenesis	Hoxd9	IGI	MGI:MGI:96180	Mouse	MGI:MGI:78984\|PMID:8625797
Biological Process	GO:0035115	embryonic forelimb morphogenesis	Hoxd9	IMP	MGI:MGI:2150414	Mouse	MGI:MGI:78984\|PMID:8625797
Biological Process	GO:0030326	embryonic limb morphogenesis	Hoxa10	IGI	MGI:MGI:96192\|MGI:MGI:96202	Mouse	MGI:MGI:2667742\|PMID:12869760
Biological Process	GO:0030326	embryonic limb morphogenesis	Hoxc10	IGI	MGI:MGI:96171\|MGI:MGI:96202	Mouse	MGI:MGI:2667742\|PMID:12869760
Biological Process	GO:0030326	embryonic limb morphogenesis	Hoxd10	IGI	MGI:MGI:96192\|MGI:MGI:96171	Mouse	MGI:MGI:2667742\|PMID:12869760
Biological Process	GO:0048706	embryonic skeletal development	Hoxa9	IGI	MGI:MGI:96190\|MGI:MGI:96199\|MGI:MGI:96210	Mouse	MGI:MGI:3720535\|PMID:17626057
Biological Process	GO:0048706	embryonic skeletal development	Hoxa9	IGI	MGI:MGI:96190	Mouse	MGI:MGI:85243\|PMID:9013929
Biological Process	GO:0048706	embryonic skeletal development	Hoxa9	IMP	MGI:MGI:2150411	Mouse	MGI:MGI:78984\|PMID:8625797
Biological Process	GO:0048706	embryonic skeletal development	Hoxa9	IGI	MGI:MGI:96210	Mouse	MGI:MGI:78984\|PMID:8625797
Biological Process	GO:0048706	embryonic skeletal development	Hoxb9	IGI	MGI:MGI:96180\|MGI:MGI:96199\|MGI:MGI:96210	Mouse	MGI:MGI:3720535\|PMID:17626057
Biological Process	GO:0048706	embryonic skeletal development	Hoxb9	IGI	MGI:MGI:96180	Mouse	MGI:MGI:85243\|PMID:9013929
Biological Process	GO:0048706	embryonic skeletal development	Hoxb9	IGI	MGI:MGI:96183\|MGI:MGI:96184\|MGI:MGI:96185\|MGI:MGI:96186\|MGI:MGI:96187\|MGI:MGI:96188\|MGI:MGI:96189\|MGI:MGI:96182	Mouse	MGI:MGI:1859107\|PMID:10885747
Biological Process	GO:0048706	embryonic skeletal development	Hoxb9	IMP	MGI:MGI:2150429	Mouse	MGI:MGI:85243\|PMID:9013929
Biological Process	GO:0048706	embryonic skeletal development	Hoxc9	IGI	MGI:MGI:96180\|MGI:MGI:96190\|MGI:MGI:96210	Mouse	MGI:MGI:3720535\|PMID:17626057
Biological Process	GO:0048706	embryonic skeletal development	Hoxd9	IGI	MGI:MGI:96180\|MGI:MGI:96190\|MGI:MGI:96199	Mouse	MGI:MGI:3720535\|PMID:17626057
Biological Process	GO:0048706	embryonic skeletal development	Hoxd9	IMP	MGI:MGI:2150414	Mouse	MGI:MGI:78984\|PMID:8625797
Biological Process	GO:0048706	embryonic skeletal development	Hoxd9	IGI	MGI:MGI:96180	Mouse	MGI:MGI:78984\|PMID:8625797
Biological Process	GO:0048704	embryonic skeletal morphogenesis	Hoxc9	IMP	MGI:MGI:2150685	Mouse	MGI:MGI:73980\|PMID:7547473
Biological Process	GO:0048704	embryonic skeletal morphogenesis	Hoxd10	IGI	MGI:MGI:96210	Mouse	MGI:MGI:1350864\|PMID:10642795
Biological Process	GO:0048704	embryonic skeletal morphogenesis	Hoxd9	IGI	MGI:MGI:96202	Mouse	MGI:MGI:1350864\|PMID:10642795
Biological Process	GO:0035136	forelimb morphogenesis	Hoxd10	IGI	MGI:MGI:96210	Mouse	MGI:MGI:1350864\|PMID:10642795
Biological Process	GO:0035136	forelimb morphogenesis	Hoxd9	IGI	MGI:MGI:96202	Mouse	MGI:MGI:1350864\|PMID:10642795
Biological Process	GO:0031047	gene silencing by RNA	AT4G25530	IMP		Dicot	TAIR:Publication:501720360\|PMID:17105345
Biological Process	GO:0006349	genetic imprinting	AT4G25530	IEP		Dicot	TAIR:Publication:501719170\|PMID:16648367
Biological Process	GO:0035137	hindlimb morphogenesis	Hoxd10	IGI	MGI:MGI:96210	Mouse	MGI:MGI:1350864\|PMID:10642795
Biological Process	GO:0035137	hindlimb morphogenesis	Hoxd9	IGI	MGI:MGI:96202	Mouse	MGI:MGI:1350864\|PMID:10642795
Biological Process	GO:0030879	mammary gland development	Hoxa9	IGI	MGI:MGI:96210\|MGI:MGI:96190	Mouse	MGI:MGI:1328716\|PMID:9892669
Biological Process	GO:0030879	mammary gland development	Hoxb9	IGI	MGI:MGI:96210\|MGI:MGI:96180	Mouse	MGI:MGI:1328716\|PMID:9892669
Biological Process	GO:0030879	mammary gland development	Hoxd9	IGI	MGI:MGI:96180\|MGI:MGI:96190	Mouse	MGI:MGI:1328716\|PMID:9892669
Biological Process	GO:0007275	multicellular organismal development	Hoxa10	IDA		Mouse	MGI:MGI:2177896\|PMID:11900456
Biological Process	GO:0050905	neuromuscular process	Hoxc10	IGI	MGI:MGI:96202	Mouse	MGI:MGI:3771768\|PMID:18065432
Biological Process	GO:0050905	neuromuscular process	Hoxd10	IGI	MGI:MGI:96192	Mouse	MGI:MGI:3771768\|PMID:18065432
Biological Process	GO:0048935	peripheral nervous system neuron development	Hoxd10	IGI	MGI:MGI:96210	Mouse	MGI:MGI:1350864\|PMID:10642795
Biological Process	GO:0048935	peripheral nervous system neuron development	Hoxd9	IGI	MGI:MGI:96202	Mouse	MGI:MGI:1350864\|PMID:10642795
Biological Process	GO:0009911	positive regulation of flower development	AT4G25530	IMP		Dicot	TAIR:Publication:2943\|PMID:9401118
Biological Process	GO:0045944	positive regulation of transcription from RNA polymerase II promoter	Hoxd10	IDA		Mouse	MGI:MGI:3629247\|PMID:16672333
Biological Process	GO:0045944	positive regulation of transcription from RNA polymerase II promoter	Hoxd10	IDA		Mouse	MGI:MGI:893284\|PMID:1756725
Biological Process	GO:0045944	positive regulation of transcription from RNA polymerase II promoter	Hoxd9	IDA		Mouse	MGI:MGI:893284\|PMID:1756725
Biological Process	GO:0009954	proximal/distal pattern formation	Hoxa10	IGI	MGI:MGI:96192\|MGI:MGI:96202	Mouse	MGI:MGI:2667742\|PMID:12869760
Biological Process	GO:0009954	proximal/distal pattern formation	Hoxa9	IGI	MGI:MGI:96210	Mouse	MGI:MGI:78984\|PMID:8625797
Biological Process	GO:0009954	proximal/distal pattern formation	Hoxc10	IGI	MGI:MGI:96171\|MGI:MGI:96202	Mouse	MGI:MGI:2667742\|PMID:12869760
Biological Process	GO:0009954	proximal/distal pattern formation	Hoxd10	IGI	MGI:MGI:96192\|MGI:MGI:96171	Mouse	MGI:MGI:2667742\|PMID:12869760
Biological Process	GO:0009954	proximal/distal pattern formation	Hoxd9	IMP	MGI:MGI:2150414	Mouse	MGI:MGI:78984\|PMID:8625797
Biological Process	GO:0009954	proximal/distal pattern formation	Hoxd9	IGI	MGI:MGI:96180	Mouse	MGI:MGI:78984\|PMID:8625797
Biological Process	GO:0001501	skeletal development	Hoxa10	IGI	MGI:MGI:96192\|MGI:MGI:96202	Mouse	MGI:MGI:2667742\|PMID:12869760
Biological Process	GO:0001501	skeletal development	Hoxc10	IGI	MGI:MGI:96171\|MGI:MGI:96202	Mouse	MGI:MGI:2667742\|PMID:12869760
Biological Process	GO:0001501	skeletal development	Hoxd10	IGI	MGI:MGI:96192\|MGI:MGI:96171	Mouse	MGI:MGI:2667742\|PMID:12869760
Biological Process	GO:0001501	skeletal development	Hoxd10	IMP	MGI:MGI:1934269	Mouse	MGI:MGI:1101279\|PMID:9409668
Biological Process	GO:0007519	skeletal muscle development	Hoxd10	IGI	MGI:MGI:96210	Mouse	MGI:MGI:1350864\|PMID:10642795
Biological Process	GO:0007519	skeletal muscle development	Hoxd9	IGI	MGI:MGI:96202	Mouse	MGI:MGI:1350864\|PMID:10642795
Biological Process	GO:0021520	spinal cord motor neuron cell fate specification	Hoxc10	IGI	MGI:MGI:96202	Mouse	MGI:MGI:3771768\|PMID:18065432
Biological Process	GO:0021520	spinal cord motor neuron cell fate specification	Hoxd10	IGI	MGI:MGI:96192	Mouse	MGI:MGI:3771768\|PMID:18065432

Gene Ontology Evidence Code Abbreviations:

IC Inferred by curator

IDA Inferred from direct assay

IEA Inferred from electronic annotation

IEP Inferred from expression pattern

IGC Inferred from genomic context

IGI Inferred from genetic interaction

IMP Inferred from mutant phenotype

IPI Inferred from physical interaction

ISA Inferred from sequence alignment

ISM Inferred from sequence model

ISO Inferred from sequence orthology

ISS Inferred from sequence or structural similarity

NAS Non-traceable Author Statement

ND No biological data available

RCA Reviewed computational analysis

TAS Traceable author statement

NR Not recorded (appears in some legacy annotations)