! No parse for: GO:0000001 mitochondrion inheritance ! No parse for: GO:0000002 mitochondrial genome maintenance ! No parse for: GO:0000011 vacuole inheritance ! Already have xp for: GO:0000022 mitotic spindle elongation ! CURRENT : spindle elongation that OBO_REL:part_of mitosis [cdef(GO:0051231, [OBO_REL:part_of=GO:0007067])] ! parse: GO:0000027 using "ribosomal large subunit assembly and maintenance" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0015934]) [-2] ! no existing xp def ! def: "The aggregation and bonding together of constituent RNAs and proteins to form and maintain the large ribosomal subunit." ! PROPOSED: cellular component assembly that OBO_REL:results_in_creation_of large ribosomal subunit [cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0015934])] [Term] id: GO:0000027 ! ribosomal large subunit assembly and maintenance intersection_of: GO:0022607 ! cellular component assembly intersection_of: OBO_REL:results_in_creation_of GO:0015934 ! large ribosomal subunit synonym: "assembly and maintenance of large ribosomal subunit" EXACT [OBOL:automatic] synonym: "assembly and maintenance of ribosomal large subunit" EXACT [OBOL:automatic] synonym: "assembly of large ribosomal subunit" EXACT [OBOL:automatic] synonym: "assembly of ribosomal large subunit" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of large ribosomal subunit" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of ribosomal large subunit" EXACT [OBOL:automatic] synonym: "biogenesis of large ribosomal subunit" EXACT [OBOL:automatic] synonym: "biogenesis of ribosomal large subunit" EXACT [OBOL:automatic] synonym: "cell structure assembly of large ribosomal subunit" EXACT [OBOL:automatic] synonym: "cell structure assembly of ribosomal large subunit" EXACT [OBOL:automatic] synonym: "cellular component assembly of large ribosomal subunit" EXACT [OBOL:automatic] synonym: "cellular component assembly of ribosomal large subunit" EXACT [OBOL:automatic] synonym: "complex assembly of large ribosomal subunit" EXACT [OBOL:automatic] synonym: "complex assembly of ribosomal large subunit" EXACT [OBOL:automatic] synonym: "formation of large ribosomal subunit" EXACT [OBOL:automatic] synonym: "formation of ribosomal large subunit" EXACT [OBOL:automatic] synonym: "large ribosomal subunit assembly" EXACT [OBOL:automatic] synonym: "large ribosomal subunit assembly and maintenance" EXACT [OBOL:automatic] synonym: "large ribosomal subunit biogenesis" EXACT [OBOL:automatic] synonym: "large ribosomal subunit biogenesis and assembly" EXACT [OBOL:automatic] synonym: "large ribosomal subunit cell structure assembly" EXACT [OBOL:automatic] synonym: "large ribosomal subunit cellular component assembly" EXACT [OBOL:automatic] synonym: "large ribosomal subunit complex assembly" EXACT [OBOL:automatic] synonym: "large ribosomal subunit formation" EXACT [OBOL:automatic] synonym: "ribosomal large subunit assembly" EXACT [OBOL:automatic] synonym: "ribosomal large subunit biogenesis" EXACT [OBOL:automatic] synonym: "ribosomal large subunit biogenesis and assembly" EXACT [OBOL:automatic] synonym: "ribosomal large subunit cell structure assembly" EXACT [OBOL:automatic] synonym: "ribosomal large subunit cellular component assembly" EXACT [OBOL:automatic] synonym: "ribosomal large subunit complex assembly" EXACT [OBOL:automatic] synonym: "ribosomal large subunit formation" EXACT [OBOL:automatic] def: "The aggregation and bonding together of a set of macromolecules to form a large ribosomal subunit" [OBOL:automatic] ! seconds spent parsing GO:0000027: 11.04 ! No parse for: GO:0000028 ribosomal small subunit assembly and maintenance ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0000032 using "cell wall mannoprotein anabolism" => cdef(GO:0006057, [OBO_REL:results_in_creation_of=GO:0005618]) [-2] ! parse: GO:0000032 using "cell wall mannoprotein biosynthesis" => cdef(GO:0006057, [OBO_REL:results_in_creation_of=GO:0005618]) [-2] ! parse: GO:0000032 using "cell wall mannoprotein biosynthetic process" => cdef(GO:0006057, [OBO_REL:results_in_creation_of=GO:0005618]) [-2] ! parse: GO:0000032 using "cell wall mannoprotein formation" => cdef(GO:0006057, [OBO_REL:results_in_creation_of=GO:0005618]) [-2] ! parse: GO:0000032 using "cell wall mannoprotein formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(mannoprotein, anatomy), OBO_REL:unfolds_in=GO:0005618]) [-14] ! parse: GO:0000032 using "cell wall mannoprotein formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(wall mannoprotein, anatomy), OBO_REL:unfolds_in=CL:0000000]) [-19] ! parse: GO:0000032 using "cell wall mannoprotein formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(wall mannoprotein, anatomy), OBO_REL:unfolds_in=ZFA:0009000]) [-19] ! parse: GO:0000032 using "cell wall mannoprotein synthesis" => cdef(GO:0006057, [OBO_REL:results_in_creation_of=GO:0005618]) [-2] ! no existing xp def ! def: "The chemical reactions and pathways resulting in the formation of cell wall mannoproteins, any cell wall protein that contains covalently bound mannose residues other than as a moiety of nucleic acid." ! PROPOSED: mannoprotein biosynthetic process that OBO_REL:results_in_creation_of cell wall [cdef(GO:0006057, [OBO_REL:results_in_creation_of=GO:0005618])] [Term] id: GO:0000032 ! cell wall mannoprotein biosynthetic process intersection_of: GO:0006057 ! mannoprotein biosynthetic process intersection_of: OBO_REL:results_in_creation_of GO:0005618 ! cell wall def: "The aggregation and bonding together of a set of macromolecules to form a cell wall" [OBOL:automatic] ! seconds spent parsing GO:0000032: 84.9 ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0000045 using "autophagic vacuole formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=GO:0005776]) [-2] ! parse: GO:0000045 using "autophagic vacuole formation" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0005776]) [-2] ! parse: GO:0000045 using "autophagic vacuole formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0005776]) [-2] ! parse: GO:0000045 using "autophagic vacuole formation" => cdef(cdef(GO:0009058, [OBO_REL:results_in_creation_of=GO:0005773]), [OBO_REL:part_of=GO:0006914]) [-3] ! parse: GO:0000045 using "autophagic vacuole formation" => cdef(cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0005773]), [OBO_REL:part_of=GO:0006914]) [-3] ! parse: GO:0000045 using "autophagic vacuole formation" => cdef(cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0005773]), [OBO_REL:part_of=GO:0006914]) [-3] ! parse: GO:0000045 using "autophagosome biosynthesis" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=GO:0005776]) [-2] ! parse: GO:0000045 using "autophagosome formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=GO:0005776]) [-2] ! parse: GO:0000045 using "autophagosome formation" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0005776]) [-2] ! parse: GO:0000045 using "autophagosome formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0005776]) [-2] ! no existing xp def ! def: "The formation of a double membrane-bound structure, the autophagosome, that occurs when a specialized membrane sac, called the isolation membrane, starts to enclose a portion of the cytoplasm." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of autophagic vacuole [cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0005776])] [Term] id: GO:0000045 ! autophagic vacuole formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of GO:0005776 ! autophagic vacuole synonym: "autophagic vacuole anatomical structure formation" EXACT [OBOL:automatic] synonym: "autophagic vacuole formation of an anatomical structure" EXACT [OBOL:automatic] synonym: "autophagosome anatomical structure formation" EXACT [OBOL:automatic] synonym: "autophagosome formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0000045: 32.24 ! No parse for: GO:0000046 autophagic vacuole fusion ! parse: GO:0000054 using "ribosome export from nucleus" => cdef(GO:0006810, [OBO_REL:results_in_transport_from=GO:0005634, OBO_REL:unfolds_in=GO:0005840]) [-3] ! parse: GO:0000054 using "ribosome export from nucleus" => cdef(GO:0051168, [OBO_REL:results_in_transport_of=GO:0005840]) [-2] ! no existing xp def ! def: "The directed movement of a ribosome from the nucleus into the cytoplasm." ! PROPOSED: nuclear export that OBO_REL:results_in_transport_of ribosome [cdef(GO:0051168, [OBO_REL:results_in_transport_of=GO:0005840])] [Term] id: GO:0000054 ! ribosome export from nucleus intersection_of: GO:0051168 ! nuclear export intersection_of: OBO_REL:results_in_transport_of GO:0005840 ! ribosome ! seconds spent parsing GO:0000054: 40.37 ! parse: GO:0000055 using "ribosomal large subunit export from nucleus" => cdef(GO:0006810, [OBO_REL:results_in_transport_from=GO:0005634, OBO_REL:unfolds_in=GO:0015934]) [-3] ! parse: GO:0000055 using "ribosomal large subunit export from nucleus" => cdef(GO:0051168, [OBO_REL:results_in_transport_of=GO:0015934]) [-2] ! no existing xp def ! def: "The directed movement of a ribosomal large subunit from the nucleus into the cytoplasm." ! PROPOSED: nuclear export that OBO_REL:results_in_transport_of large ribosomal subunit [cdef(GO:0051168, [OBO_REL:results_in_transport_of=GO:0015934])] [Term] id: GO:0000055 ! ribosomal large subunit export from nucleus intersection_of: GO:0051168 ! nuclear export intersection_of: OBO_REL:results_in_transport_of GO:0015934 ! large ribosomal subunit synonym: "large ribosomal subunit export from nucleus" EXACT [OBOL:automatic] synonym: "large ribosomal subunit nuclear export" EXACT [OBOL:automatic] synonym: "large ribosomal subunit nucleus export" EXACT [OBOL:automatic] synonym: "large ribosomal subunit substance nuclear export" EXACT [OBOL:automatic] ! seconds spent parsing GO:0000055: 30.28 ! No parse for: GO:0000056 ribosomal small subunit export from nucleus ! Already have xp for: GO:0000070 mitotic sister chromatid segregation ! CURRENT : chromosome segregation that OBO_REL:part_of mitosis [cdef(GO:0007059, [OBO_REL:part_of=GO:0007067])] ! No parse for: GO:0000073 spindle pole body separation ! No parse for: GO:0000074 regulation of progression through cell cycle ! No parse for: GO:0000075 cell cycle checkpoint ! No parse for: GO:0000078 cell morphogenesis checkpoint ! No parse for: GO:0000103 sulfate assimilation ! parse: GO:0000147 using "actin cortical patch assembly" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0030479]) [-2] ! no existing xp def ! def: "Assembly of an actin cortical patch, a discrete actin-containing structure found at the plasma membrane of fungal cells." ! PROPOSED: cellular component assembly that OBO_REL:results_in_creation_of actin cortical patch [cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0030479])] [Term] id: GO:0000147 ! actin cortical patch assembly intersection_of: GO:0022607 ! cellular component assembly intersection_of: OBO_REL:results_in_creation_of GO:0030479 ! actin cortical patch synonym: "actin cortical patch (sensu Fungi) assembly" EXACT [OBOL:automatic] synonym: "actin cortical patch (sensu Fungi) assembly and maintenance" EXACT [OBOL:automatic] synonym: "actin cortical patch (sensu Fungi) biogenesis" EXACT [OBOL:automatic] synonym: "actin cortical patch (sensu Fungi) biogenesis and assembly" EXACT [OBOL:automatic] synonym: "actin cortical patch (sensu Fungi) cell structure assembly" EXACT [OBOL:automatic] synonym: "actin cortical patch (sensu Fungi) cellular component assembly" EXACT [OBOL:automatic] synonym: "actin cortical patch (sensu Fungi) complex assembly" EXACT [OBOL:automatic] synonym: "actin cortical patch (sensu Fungi) formation" EXACT [OBOL:automatic] synonym: "actin cortical patch assembly and maintenance" EXACT [OBOL:automatic] synonym: "actin cortical patch biogenesis" EXACT [OBOL:automatic] synonym: "actin cortical patch biogenesis and assembly" EXACT [OBOL:automatic] synonym: "actin cortical patch cell structure assembly" EXACT [OBOL:automatic] synonym: "actin cortical patch cellular component assembly" EXACT [OBOL:automatic] synonym: "actin cortical patch complex assembly" EXACT [OBOL:automatic] synonym: "actin cortical patch formation" EXACT [OBOL:automatic] synonym: "actin patch assembly" EXACT [OBOL:automatic] synonym: "actin patch assembly and maintenance" EXACT [OBOL:automatic] synonym: "actin patch biogenesis" EXACT [OBOL:automatic] synonym: "actin patch biogenesis and assembly" EXACT [OBOL:automatic] synonym: "actin patch cell structure assembly" EXACT [OBOL:automatic] synonym: "actin patch cellular component assembly" EXACT [OBOL:automatic] synonym: "actin patch complex assembly" EXACT [OBOL:automatic] synonym: "actin patch formation" EXACT [OBOL:automatic] synonym: "assembly and maintenance of actin cortical patch" EXACT [OBOL:automatic] synonym: "assembly and maintenance of actin cortical patch (sensu Fungi)" EXACT [OBOL:automatic] synonym: "assembly and maintenance of actin patch" EXACT [OBOL:automatic] synonym: "assembly of actin cortical patch" EXACT [OBOL:automatic] synonym: "assembly of actin cortical patch (sensu Fungi)" EXACT [OBOL:automatic] synonym: "assembly of actin patch" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of actin cortical patch" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of actin cortical patch (sensu Fungi)" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of actin patch" EXACT [OBOL:automatic] synonym: "biogenesis of actin cortical patch" EXACT [OBOL:automatic] synonym: "biogenesis of actin cortical patch (sensu Fungi)" EXACT [OBOL:automatic] synonym: "biogenesis of actin patch" EXACT [OBOL:automatic] synonym: "cell structure assembly of actin cortical patch" EXACT [OBOL:automatic] synonym: "cell structure assembly of actin cortical patch (sensu Fungi)" EXACT [OBOL:automatic] synonym: "cell structure assembly of actin patch" EXACT [OBOL:automatic] synonym: "cellular component assembly of actin cortical patch" EXACT [OBOL:automatic] synonym: "cellular component assembly of actin cortical patch (sensu Fungi)" EXACT [OBOL:automatic] synonym: "cellular component assembly of actin patch" EXACT [OBOL:automatic] synonym: "complex assembly of actin cortical patch" EXACT [OBOL:automatic] synonym: "complex assembly of actin cortical patch (sensu Fungi)" EXACT [OBOL:automatic] synonym: "complex assembly of actin patch" EXACT [OBOL:automatic] synonym: "formation of actin cortical patch" EXACT [OBOL:automatic] synonym: "formation of actin cortical patch (sensu Fungi)" EXACT [OBOL:automatic] synonym: "formation of actin patch" EXACT [OBOL:automatic] def: "The aggregation and bonding together of a set of macromolecules to form a actin cortical patch" [OBOL:automatic] ! seconds spent parsing GO:0000147: 9.32 ! Already have xp for: GO:0000161 MAPKKK cascade during osmolarity sensing ! CURRENT : MAPKKK cascade that OBO_REL:part_of osmosensory signaling pathway [cdef(GO:0000165, [OBO_REL:part_of=GO:0007231])] ! No parse for: GO:0000165 MAPKKK cascade ! Already have xp for: GO:0000173 inactivation of MAPK activity during osmolarity sensing ! CURRENT : inactivation of MAPK activity that OBO_REL:part_of osmosensory signaling pathway [cdef(GO:0000188, [OBO_REL:part_of=GO:0007231])] ! No parse for: GO:0000183 chromatin silencing at rDNA ! No parse for: GO:0000188 inactivation of MAPK activity ! Already have xp for: GO:0000196 MAPKKK cascade during cell wall biogenesis ! CURRENT : MAPKKK cascade that OBO_REL:part_of cell wall biogenesis [cdef(GO:0000165, [OBO_REL:part_of=GO:0042546])] ! Already have xp for: GO:0000197 activation of MAPKKK activity during cell wall biogenesis ! CURRENT : activation of MAPKKK activity that OBO_REL:part_of cell wall biogenesis [cdef(GO:0000185, [OBO_REL:part_of=GO:0042546])] ! Already have xp for: GO:0000198 activation of MAPKK activity during cell wall biogenesis ! CURRENT : activation of MAPKK activity that OBO_REL:part_of cell wall biogenesis [cdef(GO:0000186, [OBO_REL:part_of=GO:0042546])] ! Already have xp for: GO:0000199 activation of MAPK activity during cell wall biogenesis ! CURRENT : activation of MAPK activity that OBO_REL:part_of cell wall biogenesis [cdef(GO:0000187, [OBO_REL:part_of=GO:0042546])] ! Already have xp for: GO:0000200 inactivation of MAPK activity during cell wall biogenesis ! CURRENT : inactivation of MAPK activity that OBO_REL:part_of cell wall biogenesis [cdef(GO:0000188, [OBO_REL:part_of=GO:0042546])] ! Already have xp for: GO:0000201 nuclear translocation of MAPK during cell wall biogenesis ! CURRENT : nuclear translocation of MAPK that OBO_REL:part_of cell wall biogenesis [cdef(GO:0000189, [OBO_REL:part_of=GO:0042546])] ! Already have xp for: GO:0000212 meiotic spindle organization and biogenesis ! CURRENT : spindle organization and biogenesis that OBO_REL:part_of meiosis [cdef(GO:0007051, [OBO_REL:part_of=GO:0007126])] ! parse: GO:0000226 using "microtubule cytoskeleton organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0005856, OBO_REL:unfolds_in=GO:0005874]) [-3] ! parse: GO:0000226 using "microtubule cytoskeleton organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0015630]) [-2] ! parse: GO:0000226 using "microtubule cytoskeleton organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=cdef(GO:0005856, [OBO_REL:part_of=GO:0005874])]) [-3] ! no existing xp def ! def: "A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins." ! PROPOSED: cellular component organization and biogenesis that OBO_REL:results_in_structural_change_to microtubule cytoskeleton [cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0015630])] [Term] id: GO:0000226 ! microtubule cytoskeleton organization and biogenesis intersection_of: GO:0016043 ! cellular component organization and biogenesis intersection_of: OBO_REL:results_in_structural_change_to GO:0015630 ! microtubule cytoskeleton synonym: "microtubule cytoskeleton organization" EXACT [OBOL:automatic] ! seconds spent parsing GO:0000226: 18.86 ! No parse for: GO:0000238 zygotene ! No parse for: GO:0000244 assembly of spliceosomal tri-snRNP ! parse: GO:0000245 using "spliceosome assembly" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0005681]) [-2] ! no existing xp def ! def: "The aggregation and bonding together of the spliceosome, a ribonucleoprotein apparatus that catalyzes nuclear mRNA splicing via transesterification reactions." ! PROPOSED: cellular component assembly that OBO_REL:results_in_creation_of spliceosome [cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0005681])] [Term] id: GO:0000245 ! spliceosome assembly intersection_of: GO:0022607 ! cellular component assembly intersection_of: OBO_REL:results_in_creation_of GO:0005681 ! spliceosome synonym: "assembly and maintenance of spliceosome" EXACT [OBOL:automatic] synonym: "assembly and maintenance of spliceosome complex" EXACT [OBOL:automatic] synonym: "assembly of spliceosome" EXACT [OBOL:automatic] synonym: "assembly of spliceosome complex" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of spliceosome" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of spliceosome complex" EXACT [OBOL:automatic] synonym: "biogenesis of spliceosome" EXACT [OBOL:automatic] synonym: "biogenesis of spliceosome complex" EXACT [OBOL:automatic] synonym: "cell structure assembly of spliceosome" EXACT [OBOL:automatic] synonym: "cell structure assembly of spliceosome complex" EXACT [OBOL:automatic] synonym: "cellular component assembly of spliceosome" EXACT [OBOL:automatic] synonym: "cellular component assembly of spliceosome complex" EXACT [OBOL:automatic] synonym: "complex assembly of spliceosome" EXACT [OBOL:automatic] synonym: "complex assembly of spliceosome complex" EXACT [OBOL:automatic] synonym: "formation of spliceosome" EXACT [OBOL:automatic] synonym: "formation of spliceosome complex" EXACT [OBOL:automatic] synonym: "spliceosome assembly and maintenance" EXACT [OBOL:automatic] synonym: "spliceosome biogenesis" EXACT [OBOL:automatic] synonym: "spliceosome biogenesis and assembly" EXACT [OBOL:automatic] synonym: "spliceosome cell structure assembly" EXACT [OBOL:automatic] synonym: "spliceosome cellular component assembly" EXACT [OBOL:automatic] synonym: "spliceosome complex assembly" EXACT [OBOL:automatic] synonym: "spliceosome complex assembly and maintenance" EXACT [OBOL:automatic] synonym: "spliceosome complex biogenesis" EXACT [OBOL:automatic] synonym: "spliceosome complex biogenesis and assembly" EXACT [OBOL:automatic] synonym: "spliceosome complex cell structure assembly" EXACT [OBOL:automatic] synonym: "spliceosome complex cellular component assembly" EXACT [OBOL:automatic] synonym: "spliceosome complex complex assembly" EXACT [OBOL:automatic] synonym: "spliceosome complex formation" EXACT [OBOL:automatic] synonym: "spliceosome formation" EXACT [OBOL:automatic] def: "The aggregation and bonding together of a set of macromolecules to form a spliceosome" [OBOL:automatic] ! seconds spent parsing GO:0000245: 5.5 ! No parse for: GO:0000270 peptidoglycan metabolic process ! No parse for: GO:0000282 cellular bud site selection ! No parse for: GO:0000289 poly(A) tail shortening ! Already have xp for: GO:0000296 spermine transport ! CURRENT : transport that OBO_REL:results_in_transport_of spermine [cdef(GO:0006810, [OBO_REL:results_in_transport_of=cell:spermine])] ! No parse for: GO:0000351 assembly of spliceosomal tri-snRNP U4/U6.U5 ! No parse for: GO:0000355 assembly of spliceosomal tri-snRNP U4atac/U6atac.U5 ! No parse for: GO:0000356 U2-type catalytic spliceosome formation for first transesterification step ! No parse for: GO:0000358 formation of catalytic U2-type spliceosome for second transesterification step ! No parse for: GO:0000360 cis assembly of U2-type pre-catalytic spliceosome ! No parse for: GO:0000368 U2-type nuclear mRNA 5'-splice site recognition ! No parse for: GO:0000370 U2-type nuclear mRNA branch site recognition ! No parse for: GO:0000379 tRNA-type intron splice site recognition and cleavage ! No parse for: GO:0000387 spliceosomal snRNP biogenesis ! No parse for: GO:0000388 spliceosome conformational change to release U4 (or U4atac) and U1 (or U11) ! parse: GO:0000390 using "spliceosome complex disassembly" => cdef(GO:0022411, [OBO_REL:results_in_breakdown_of=GO:0005681]) [-2] ! parse: GO:0000390 using "spliceosome disassembly" => cdef(GO:0022411, [OBO_REL:results_in_breakdown_of=GO:0005681]) [-2] ! no existing xp def ! def: "Disassembly of the spliceosome with the ATP-dependent release of the product RNAs, one of which is composed of the joined exons. In cis splicing, the other product is the excised sequence, often a single intron, in a lariat structure." ! PROPOSED: cellular component disassembly that OBO_REL:results_in_breakdown_of spliceosome [cdef(GO:0022411, [OBO_REL:results_in_breakdown_of=GO:0005681])] [Term] id: GO:0000390 ! spliceosome disassembly intersection_of: GO:0022411 ! cellular component disassembly intersection_of: OBO_REL:results_in_breakdown_of GO:0005681 ! spliceosome synonym: "cell structure disassembly of spliceosome" EXACT [OBOL:automatic] synonym: "cell structure disassembly of spliceosome complex" EXACT [OBOL:automatic] synonym: "cellular component disassembly of spliceosome" EXACT [OBOL:automatic] synonym: "cellular component disassembly of spliceosome complex" EXACT [OBOL:automatic] synonym: "disassembly of spliceosome" EXACT [OBOL:automatic] synonym: "disassembly of spliceosome complex" EXACT [OBOL:automatic] synonym: "spliceosome cell structure disassembly" EXACT [OBOL:automatic] synonym: "spliceosome cellular component disassembly" EXACT [OBOL:automatic] synonym: "spliceosome complex cell structure disassembly" EXACT [OBOL:automatic] synonym: "spliceosome complex cellular component disassembly" EXACT [OBOL:automatic] ! seconds spent parsing GO:0000390: 19.96 ! parse: GO:0000391 using "U2-dependent spliceosome disassembly" => cdef(GO:0022411, [OBO_REL:results_in_breakdown_of=GO:0005684]) [-2] ! no existing xp def ! def: "Disassembly of the U2-type spliceosome with the ATP-dependent release of the product RNAs, one of which is composed of the joined exons. The other product is the excised sequence. In cis splicing, this forms a lariat structure." ! PROPOSED: cellular component disassembly that OBO_REL:results_in_breakdown_of U2-dependent spliceosome [cdef(GO:0022411, [OBO_REL:results_in_breakdown_of=GO:0005684])] [Term] id: GO:0000391 ! U2-dependent spliceosome disassembly intersection_of: GO:0022411 ! cellular component disassembly intersection_of: OBO_REL:results_in_breakdown_of GO:0005684 ! U2-dependent spliceosome synonym: "GT-AG spliceosome cell structure disassembly" EXACT [OBOL:automatic] synonym: "GT-AG spliceosome cellular component disassembly" EXACT [OBOL:automatic] synonym: "GT-AG spliceosome disassembly" EXACT [OBOL:automatic] synonym: "U 2-dependent spliceosome cell structure disassembly" EXACT [OBOL:automatic] synonym: "U 2-dependent spliceosome cellular component disassembly" EXACT [OBOL:automatic] synonym: "U 2-dependent spliceosome disassembly" EXACT [OBOL:automatic] synonym: "cell structure disassembly of GT-AG spliceosome" EXACT [OBOL:automatic] synonym: "cell structure disassembly of U 2-dependent spliceosome" EXACT [OBOL:automatic] synonym: "cell structure disassembly of major (U 2-dependent) spliceosome" EXACT [OBOL:automatic] synonym: "cell structure disassembly of major spliceosome" EXACT [OBOL:automatic] synonym: "cellular component disassembly of GT-AG spliceosome" EXACT [OBOL:automatic] synonym: "cellular component disassembly of U 2-dependent spliceosome" EXACT [OBOL:automatic] synonym: "cellular component disassembly of major (U 2-dependent) spliceosome" EXACT [OBOL:automatic] synonym: "cellular component disassembly of major spliceosome" EXACT [OBOL:automatic] synonym: "disassembly of GT-AG spliceosome" EXACT [OBOL:automatic] synonym: "disassembly of U 2-dependent spliceosome" EXACT [OBOL:automatic] synonym: "disassembly of major (U 2-dependent) spliceosome" EXACT [OBOL:automatic] synonym: "disassembly of major spliceosome" EXACT [OBOL:automatic] synonym: "major (U 2-dependent) spliceosome cell structure disassembly" EXACT [OBOL:automatic] synonym: "major (U 2-dependent) spliceosome cellular component disassembly" EXACT [OBOL:automatic] synonym: "major (U 2-dependent) spliceosome disassembly" EXACT [OBOL:automatic] synonym: "major spliceosome cell structure disassembly" EXACT [OBOL:automatic] synonym: "major spliceosome cellular component disassembly" EXACT [OBOL:automatic] synonym: "major spliceosome disassembly" EXACT [OBOL:automatic] ! seconds spent parsing GO:0000391: 9.93 ! parse: GO:0000392 using "U12-dependent spliceosome disassembly" => cdef(GO:0022411, [OBO_REL:results_in_breakdown_of=GO:0005689]) [-2] ! no existing xp def ! def: "Disassembly of the U12-type spliceosome with the ATP-dependent release of the RNA composed of the joined exons and the lariat intron RNA." ! PROPOSED: cellular component disassembly that OBO_REL:results_in_breakdown_of U12-dependent spliceosome [cdef(GO:0022411, [OBO_REL:results_in_breakdown_of=GO:0005689])] [Term] id: GO:0000392 ! U12-dependent spliceosome disassembly intersection_of: GO:0022411 ! cellular component disassembly intersection_of: OBO_REL:results_in_breakdown_of GO:0005689 ! U12-dependent spliceosome synonym: "AT-AC spliceosome cell structure disassembly" EXACT [OBOL:automatic] synonym: "AT-AC spliceosome cellular component disassembly" EXACT [OBOL:automatic] synonym: "AT-AC spliceosome disassembly" EXACT [OBOL:automatic] synonym: "U 1 2-dependent spliceosome cell structure disassembly" EXACT [OBOL:automatic] synonym: "U 1 2-dependent spliceosome cellular component disassembly" EXACT [OBOL:automatic] synonym: "U 1 2-dependent spliceosome disassembly" EXACT [OBOL:automatic] synonym: "cell structure disassembly of AT-AC spliceosome" EXACT [OBOL:automatic] synonym: "cell structure disassembly of U 1 2-dependent spliceosome" EXACT [OBOL:automatic] synonym: "cell structure disassembly of minor (U 1 2-dependent) spliceosome complex" EXACT [OBOL:automatic] synonym: "cell structure disassembly of minor spliceosome" EXACT [OBOL:automatic] synonym: "cellular component disassembly of AT-AC spliceosome" EXACT [OBOL:automatic] synonym: "cellular component disassembly of U 1 2-dependent spliceosome" EXACT [OBOL:automatic] synonym: "cellular component disassembly of minor (U 1 2-dependent) spliceosome complex" EXACT [OBOL:automatic] synonym: "cellular component disassembly of minor spliceosome" EXACT [OBOL:automatic] synonym: "disassembly of AT-AC spliceosome" EXACT [OBOL:automatic] synonym: "disassembly of U 1 2-dependent spliceosome" EXACT [OBOL:automatic] synonym: "disassembly of minor (U 1 2-dependent) spliceosome complex" EXACT [OBOL:automatic] synonym: "disassembly of minor spliceosome" EXACT [OBOL:automatic] synonym: "minor (U 1 2-dependent) spliceosome complex cell structure disassembly" EXACT [OBOL:automatic] synonym: "minor (U 1 2-dependent) spliceosome complex cellular component disassembly" EXACT [OBOL:automatic] synonym: "minor (U 1 2-dependent) spliceosome complex disassembly" EXACT [OBOL:automatic] synonym: "minor spliceosome cell structure disassembly" EXACT [OBOL:automatic] synonym: "minor spliceosome cellular component disassembly" EXACT [OBOL:automatic] synonym: "minor spliceosome disassembly" EXACT [OBOL:automatic] ! seconds spent parsing GO:0000392: 9.98 ! No parse for: GO:0000393 spliceosomal conformational changes to generate catalytic conformation ! No parse for: GO:0000396 U2-type spliceosome conformational change to release U4 and U1 ! No parse for: GO:0000422 mitochondrion degradation ! parse: GO:0000578 using "embryonic axis determination" => cdef(GO:0009798, [OBO_REL:part_of=GO:0009790]) [-2] ! parse: GO:0000578 using "embryonic axis determination" => cdef(GO:0009798, [OBO_REL:results_in_developmental_progression_of=anon(embryonic, anatomy)]) [-10] ! parse: GO:0000578 using "embryonic axis specification" => cdef(GO:0009798, [OBO_REL:part_of=GO:0009790]) [-2] ! parse: GO:0000578 using "embryonic axis specification" => cdef(GO:0009798, [OBO_REL:results_in_developmental_progression_of=anon(embryonic, anatomy)]) [-10] ! parse: GO:0000578 using "embryonic axis specification" => cdef(cdef(GO:0007389, [OBO_REL:results_in_specification_of=MA:0001422]), [OBO_REL:part_of=GO:0009790]) [-3] ! parse: GO:0000578 using "embryonic axis specification" => cdef(cdef(GO:0007389, [OBO_REL:results_in_specification_of=ZFA:0000092]), [OBO_REL:part_of=GO:0009790]) [-3] ! no existing xp def ! def: "Axis specification in the embryo." ! PROPOSED: axis specification that OBO_REL:part_of embryonic development [cdef(GO:0009798, [OBO_REL:part_of=GO:0009790])] [Term] id: GO:0000578 ! embryonic axis specification intersection_of: GO:0009798 ! axis specification intersection_of: OBO_REL:part_of GO:0009790 ! embryonic development synonym: "embryogenesis, axis determination" EXACT [OBOL:automatic] synonym: "embryogenesis, axis specification" EXACT [OBOL:automatic] synonym: "embryonal development, axis determination" EXACT [OBOL:automatic] synonym: "embryonal development, axis specification" EXACT [OBOL:automatic] synonym: "embryonic development, axis determination" EXACT [OBOL:automatic] synonym: "embryonic development, axis specification" EXACT [OBOL:automatic] def: "A axis determination that is part of a embryogenesis" [OBOL:automatic] ! seconds spent parsing GO:0000578: 26.82 ! No parse for: GO:0000722 telomere maintenance via recombination ! No parse for: GO:0000723 telomere maintenance ! No parse for: GO:0000740 nuclear membrane fusion ! No parse for: GO:0000747 conjugation with cellular fusion ! No parse for: GO:0000750 pheromone-dependent signal transduction during conjugation with cellular fusion ! No parse for: GO:0000751 cell cycle arrest in response to pheromone ! Already have xp for: GO:0000752 agglutination during conjugation with cellular fusion ! CURRENT : cell-cell adhesion that OBO_REL:part_of mating [cdef(GO:0016337, [OBO_REL:part_of=GO:0007618])] ! Already have xp for: GO:0000753 cellular morphogenesis during conjugation with cellular fusion ! CURRENT : cell morphogenesis that OBO_REL:part_of conjugation with cellular fusion [cdef(GO:0000902, [OBO_REL:part_of=GO:0000747])] ! No parse for: GO:0000755 cytogamy ! Already have xp for: GO:0000759 cellular morphogenesis during conjugation without cellular fusion ! CURRENT : cell morphogenesis that OBO_REL:part_of conjugation with mutual genetic exchange [cdef(GO:0000902, [OBO_REL:part_of=GO:0000748])] ! Already have xp for: GO:0000763 cellular morphogenesis during unidirectional conjugation ! CURRENT : cell morphogenesis that OBO_REL:part_of unidirectional conjugation [cdef(GO:0000902, [OBO_REL:part_of=GO:0009291])] ! Already have xp for: GO:0000764 cellular morphogenesis during pheromone-induced unidirectional conjugation ! CURRENT : cell morphogenesis that OBO_REL:part_of pheromone-induced unidirectional conjugation [cdef(GO:0000902, [OBO_REL:part_of=GO:0000762])] ! Already have xp for: GO:0000767 cellular morphogenesis during conjugation ! CURRENT : cell morphogenesis that OBO_REL:part_of conjugation [cdef(GO:0000902, [OBO_REL:part_of=GO:0000746])] ! Already have xp for: GO:0000902 cell morphogenesis ! CURRENT : anatomical structure morphogenesis that OBO_REL:part_of cellularization [cdef(GO:0009653, [OBO_REL:part_of=GO:0007349])] ! No parse for: GO:0000903 cellular morphogenesis during vegetative growth ! parse: GO:0000904 using "cellular morphogenesis during differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(cellular morphogenesis during, cell)]) [-30] ! parse: GO:0000904 using "cellular morphogenesis during differentiation" => cdef(cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(morphogenesis during, cell)]), [OBO_REL:part_of=GO:0007349]) [-22] ! no existing xp def ! def: "The change in form (cell shape and size) that occurs when relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history." ! PROPOSED: cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(morphogenesis during, cell)]) that OBO_REL:part_of cellularization [cdef(cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(morphogenesis during, cell)]), [OBO_REL:part_of=GO:0007349])] [Term] id: GO:0000904 ! cellular morphogenesis during differentiation intersection_of: morphogenesis_during_cell_differentiation intersection_of: OBO_REL:part_of GO:0007349 ! cellularization synonym: "cellular morphogenesis during cell differentiation" EXACT [OBOL:automatic] synonym: "cellularity morphogenesis during cell differentiation" EXACT [OBOL:automatic] synonym: "cellularity morphogenesis during differentiation" EXACT [OBOL:automatic] synonym: "cellularization, morphogenesis during cell differentiation" EXACT [OBOL:automatic] synonym: "cellularization, morphogenesis during differentiation" EXACT [OBOL:automatic] ! seconds spent parsing GO:0000904: 12.72 ! No parse for: GO:0000905 fruiting body development during asexual reproduction (sensu Fungi) ! No parse for: GO:0000909 fruiting body development during sexual reproduction (sensu Fungi) ! No parse for: GO:0000910 cytokinesis ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0000913 using "preprophase band formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=GO:0009574]) [-2] ! parse: GO:0000913 using "preprophase band formation" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0009574]) [-2] ! parse: GO:0000913 using "preprophase band formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0009574]) [-2] ! no existing xp def ! def: "The process of marking the position in the cell where cytokinesis will occur in cells that perform cytokinesis by cell plate formation." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of preprophase band [cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0009574])] [Term] id: GO:0000913 ! preprophase band formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of GO:0009574 ! preprophase band synonym: "preprophase band anatomical structure formation" EXACT [OBOL:automatic] synonym: "preprophase band formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0000913: 6.28 ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0000914 using "phragmoplast formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=GO:0009524]) [-2] ! parse: GO:0000914 using "phragmoplast formation" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0009524]) [-2] ! parse: GO:0000914 using "phragmoplast formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0009524]) [-2] ! no existing xp def ! def: "The formation of a structure composed of actin, myosin, and associated proteins that will function in cytokinesis in cells that perform cytokinesis by cell plate formation. The structure usually contains antiparallel microtubules and membrane (often visible as vesicles)." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of phragmoplast [cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0009524])] [Term] id: GO:0000914 ! phragmoplast formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of GO:0009524 ! phragmoplast synonym: "phragmoplast anatomical structure formation" EXACT [OBOL:automatic] synonym: "phragmoplast formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0000914: 6.18 ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0000915 using "cytokinesis, actomyosin ring biosynthesis" => cdef(cdef(GO:0009058, [OBO_REL:results_in_creation_of=GO:0005826]), [OBO_REL:part_of=GO:0000910]) [-3] ! parse: GO:0000915 using "cytokinesis, actomyosin ring formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(cytokinesis, actomyosin ring, anatomy)]) [-30] ! parse: GO:0000915 using "cytokinesis, actomyosin ring formation" => cdef(cdef(GO:0009058, [OBO_REL:results_in_creation_of=GO:0005826]), [OBO_REL:part_of=GO:0000910]) [-3] ! parse: GO:0000915 using "cytokinesis, actomyosin ring formation" => cdef(cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0005826]), [OBO_REL:part_of=GO:0000910]) [-3] ! parse: GO:0000915 using "cytokinesis, actomyosin ring formation" => cdef(cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0005826]), [OBO_REL:part_of=GO:0000910]) [-3] ! parse: GO:0000915 using "cytokinesis, actomyosin ring formation" => cdef(cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(ring, anatomy), OBO_REL:unfolds_in=GO:0042641]), [OBO_REL:part_of=GO:0000910]) [-7] ! parse: GO:0000915 using "cytokinesis, contractile ring formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(cytokinesis, contractile ring, anatomy)]) [-31] ! parse: GO:0000915 using "cytokinesis, contractile ring formation" => cdef(cdef(GO:0009058, [OBO_REL:results_in_creation_of=GO:0005826]), [OBO_REL:part_of=GO:0000910]) [-3] ! parse: GO:0000915 using "cytokinesis, contractile ring formation" => cdef(cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0005826]), [OBO_REL:part_of=GO:0000910]) [-3] ! parse: GO:0000915 using "cytokinesis, contractile ring formation" => cdef(cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0005826]), [OBO_REL:part_of=GO:0000910]) [-3] ! no existing xp def ! def: "The process of formation of a ring composed of actin, myosin, and associated proteins that will function in cytokinesis." ! PROPOSED: cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0005826]) that OBO_REL:part_of cytokinesis [cdef(cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0005826]), [OBO_REL:part_of=GO:0000910])] [Term] id: GO:0000915 ! cytokinesis, contractile ring formation intersection_of: CAR_anatomical_structure_formation intersection_of: OBO_REL:part_of GO:0000910 ! cytokinesis ! seconds spent parsing GO:0000915: 42.28 ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0000917 using "barrier septum formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=GO:0000935]) [-2] ! parse: GO:0000917 using "barrier septum formation" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0000935]) [-2] ! parse: GO:0000917 using "barrier septum formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0000935]) [-2] ! parse: GO:0000917 using "formation of barrier septum" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0000935]) [-2] ! parse: GO:0000917 using "septin assembly and septum formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(septin assembly and septum, anatomy)]) [-27] ! no existing xp def ! def: "The process of making a septum that spans the plasma membrane interface between progeny cells following cytokinesis. The progeny cells that form a barrier septum are not able to exchange intracellular material." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of barrier septum [cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0000935])] [Term] id: GO:0000917 ! barrier septum formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of GO:0000935 ! barrier septum synonym: "barrier septum anatomical structure formation" EXACT [OBOL:automatic] synonym: "barrier septum formation of an anatomical structure" EXACT [OBOL:automatic] synonym: "complete septum anatomical structure formation" EXACT [OBOL:automatic] synonym: "complete septum formation" EXACT [OBOL:automatic] synonym: "complete septum formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0000917: 28.09 ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0000918 using "selection of site for barrier cell septum formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(selection of site for barrier cell septum, anatomy)]) [-42] ! parse: GO:0000918 using "selection of site for barrier septum formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(selection of site for barrier septum, anatomy)]) [-37] ! no existing xp def ! def: "The process of marking the site where a barrier septum will form." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of anon(selection of site for barrier septum, anatomy) [cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(selection of site for barrier septum, anatomy)])] [Term] id: GO:0000918 ! selection of site for barrier septum formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of anatomy:selection_of_site_for_barrier_septum synonym: "selection of site for barrier septum anatomical structure formation" EXACT [OBOL:automatic] synonym: "selection of site for barrier septum formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0000918: 23.66 ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0000919 using "cell plate formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=FBbt:00004475, OBO_REL:unfolds_in=CL:0000000]) [-3] ! parse: GO:0000919 using "cell plate formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=FBbt:00004475, OBO_REL:unfolds_in=ZFA:0009000]) [-3] ! parse: GO:0000919 using "cell plate formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=FBbt:00004732, OBO_REL:unfolds_in=CL:0000000]) [-3] ! parse: GO:0000919 using "cell plate formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=FBbt:00004732, OBO_REL:unfolds_in=ZFA:0009000]) [-3] ! parse: GO:0000919 using "cell plate formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=GO:0009504]) [-2] ! parse: GO:0000919 using "cell plate formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=cdef(FBbt:00004475, [OBO_REL:part_of=ZFA:0009000])]) [-3] ! parse: GO:0000919 using "cell plate formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=cdef(FBbt:00004732, [OBO_REL:part_of=ZFA:0009000])]) [-3] ! parse: GO:0000919 using "cell plate formation" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0009504]) [-2] ! parse: GO:0000919 using "cell plate formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=FBbt:00004475, OBO_REL:unfolds_in=CL:0000000]) [-3] ! parse: GO:0000919 using "cell plate formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=FBbt:00004475, OBO_REL:unfolds_in=ZFA:0009000]) [-3] ! parse: GO:0000919 using "cell plate formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=FBbt:00004732, OBO_REL:unfolds_in=CL:0000000]) [-3] ! parse: GO:0000919 using "cell plate formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=FBbt:00004732, OBO_REL:unfolds_in=ZFA:0009000]) [-3] ! parse: GO:0000919 using "cell plate formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0009504]) [-2] ! parse: GO:0000919 using "cell plate formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=cdef(FBbt:00004475, [OBO_REL:part_of=ZFA:0009000])]) [-3] ! parse: GO:0000919 using "cell plate formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=cdef(FBbt:00004732, [OBO_REL:part_of=ZFA:0009000])]) [-3] ! no existing xp def ! def: "The process of assembly, maturation, and growth of the cell plate to the cell periphery in cells that divide by cell plate formation; often involves deposition of cell wall material in and around the phragmoplast." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of cell plate [cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0009504])] [Term] id: GO:0000919 ! cell plate formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of GO:0009504 ! cell plate synonym: "cell plate anatomical structure formation" EXACT [OBOL:automatic] synonym: "cell plate formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0000919: 20.27 ! No parse for: GO:0000920 cell separation during cytokinesis ! parse: GO:0000921 using "septin ring assembly" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0005940]) [-2] ! no existing xp def ! def: "The aggregation and bonding together of septins and associated proteins to form an organized structure resembling a ring at the cell cortex." ! PROPOSED: cellular component assembly that OBO_REL:results_in_creation_of septin ring [cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0005940])] [Term] id: GO:0000921 ! septin ring assembly intersection_of: GO:0022607 ! cellular component assembly intersection_of: OBO_REL:results_in_creation_of GO:0005940 ! septin ring synonym: "assembly and maintenance of septin ring" EXACT [OBOL:automatic] synonym: "assembly of septin ring" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of septin ring" EXACT [OBOL:automatic] synonym: "biogenesis of septin ring" EXACT [OBOL:automatic] synonym: "cell structure assembly of septin ring" EXACT [OBOL:automatic] synonym: "cellular component assembly of septin ring" EXACT [OBOL:automatic] synonym: "complex assembly of septin ring" EXACT [OBOL:automatic] synonym: "formation of septin ring" EXACT [OBOL:automatic] synonym: "septin ring assembly and maintenance" EXACT [OBOL:automatic] synonym: "septin ring biogenesis" EXACT [OBOL:automatic] synonym: "septin ring biogenesis and assembly" EXACT [OBOL:automatic] synonym: "septin ring cell structure assembly" EXACT [OBOL:automatic] synonym: "septin ring cellular component assembly" EXACT [OBOL:automatic] synonym: "septin ring complex assembly" EXACT [OBOL:automatic] synonym: "septin ring formation" EXACT [OBOL:automatic] def: "The aggregation and bonding together of a set of macromolecules to form a septin ring" [OBOL:automatic] ! seconds spent parsing GO:0000921: 5.53 ! parse: GO:0001307 using "extrachromosomal circular DNA accumulation during replicative cell ageing" => cdef(GO:0001302, [OBO_REL:results_in_developmental_progression_of=anon(accumulation during, anatomy), OBO_REL:unfolds_in=GO:0005727]) [-21] ! parse: GO:0001307 using "extrachromosomal circular DNA accumulation during replicative cell ageing" => cdef(GO:0007568, [OBO_REL:results_in_developmental_progression_of=anon(accumulation during replicative cell, anatomy), OBO_REL:unfolds_in=GO:0005727]) [-38] ! parse: GO:0001307 using "extrachromosomal circular DNA accumulation during replicative cell ageing" => cdef(GO:0007569, [OBO_REL:results_in_developmental_progression_of=anon(accumulation during replicative, anatomy), OBO_REL:unfolds_in=GO:0005727]) [-33] ! parse: GO:0001307 using "extrachromosomal circular DNA accumulation during replicative cell aging" => cdef(GO:0001302, [OBO_REL:results_in_developmental_progression_of=anon(accumulation during, anatomy), OBO_REL:unfolds_in=GO:0005727]) [-21] ! parse: GO:0001307 using "extrachromosomal circular DNA accumulation during replicative cell aging" => cdef(GO:0007568, [OBO_REL:results_in_developmental_progression_of=anon(accumulation during replicative cell, anatomy), OBO_REL:unfolds_in=GO:0005727]) [-38] ! parse: GO:0001307 using "extrachromosomal circular DNA accumulation during replicative cell aging" => cdef(GO:0007569, [OBO_REL:results_in_developmental_progression_of=anon(accumulation during replicative, anatomy), OBO_REL:unfolds_in=GO:0005727]) [-33] ! no existing xp def ! def: "Increase in abundance of circular DNA molecules in dividing cells as they age. These molecules originate in the chromosome but are excised and circularized, often by intramolecular homologous recombination between direct tandem repeats, and then replicated independently of chromosomal replication." ! PROPOSED: replicative cell aging that OBO_REL:results_in_developmental_progression_of anon(accumulation during, anatomy) and OBO_REL:unfolds_in extrachromosomal circular DNA [cdef(GO:0001302, [OBO_REL:results_in_developmental_progression_of=anon(accumulation during, anatomy), OBO_REL:unfolds_in=GO:0005727])] [Term] id: GO:0001307 ! extrachromosomal circular DNA accumulation during replicative cell aging intersection_of: GO:0001302 ! replicative cell aging intersection_of: OBO_REL:results_in_developmental_progression_of anatomy:accumulation_during intersection_of: OBO_REL:unfolds_in GO:0005727 ! extrachromosomal circular DNA synonym: "plasmid binding accumulation during replicative cell ageing" EXACT [OBOL:automatic] synonym: "plasmid binding accumulation during replicative cell aging" EXACT [OBOL:automatic] ! seconds spent parsing GO:0001307: 21.15 ! parse: GO:0001310 using "extrachromosomal rDNA circle accumulation during replicative cell ageing" => cdef(GO:0001302, [OBO_REL:results_in_developmental_progression_of=anon(accumulation during, anatomy), OBO_REL:unfolds_in=GO:0005728]) [-21] ! parse: GO:0001310 using "extrachromosomal rDNA circle accumulation during replicative cell ageing" => cdef(GO:0007568, [OBO_REL:results_in_developmental_progression_of=anon(accumulation during replicative cell, anatomy), OBO_REL:unfolds_in=GO:0005728]) [-38] ! parse: GO:0001310 using "extrachromosomal rDNA circle accumulation during replicative cell ageing" => cdef(GO:0007569, [OBO_REL:results_in_developmental_progression_of=anon(accumulation during replicative, anatomy), OBO_REL:unfolds_in=GO:0005728]) [-33] ! parse: GO:0001310 using "extrachromosomal rDNA circle accumulation during replicative cell aging" => cdef(GO:0001302, [OBO_REL:results_in_developmental_progression_of=anon(accumulation during, anatomy), OBO_REL:unfolds_in=GO:0005728]) [-21] ! parse: GO:0001310 using "extrachromosomal rDNA circle accumulation during replicative cell aging" => cdef(GO:0007568, [OBO_REL:results_in_developmental_progression_of=anon(accumulation during replicative cell, anatomy), OBO_REL:unfolds_in=GO:0005728]) [-38] ! parse: GO:0001310 using "extrachromosomal rDNA circle accumulation during replicative cell aging" => cdef(GO:0007569, [OBO_REL:results_in_developmental_progression_of=anon(accumulation during replicative, anatomy), OBO_REL:unfolds_in=GO:0005728]) [-33] ! parse: GO:0001310 using "extrachromosomal ribosomal DNA circle accumulation during replicative cell aging" => cdef(GO:0001302, [OBO_REL:results_in_developmental_progression_of=anon(accumulation during, anatomy), OBO_REL:unfolds_in=GO:0005728]) [-21] ! parse: GO:0001310 using "extrachromosomal ribosomal DNA circle accumulation during replicative cell aging" => cdef(GO:0007568, [OBO_REL:results_in_developmental_progression_of=anon(accumulation during replicative cell, anatomy), OBO_REL:unfolds_in=GO:0005728]) [-38] ! parse: GO:0001310 using "extrachromosomal ribosomal DNA circle accumulation during replicative cell aging" => cdef(GO:0007569, [OBO_REL:results_in_developmental_progression_of=anon(accumulation during replicative, anatomy), OBO_REL:unfolds_in=GO:0005728]) [-33] ! no existing xp def ! def: "Increase in abundance of circular DNA molecules in dividing cells as they age. These molecules originate in the chromosome but are excised and circularized, often by intramolecular homologous recombination between direct tandem repeats, and then replicated independently of chromosomal replication." ! PROPOSED: replicative cell aging that OBO_REL:results_in_developmental_progression_of anon(accumulation during, anatomy) and OBO_REL:unfolds_in extrachromosomal rDNA circle [cdef(GO:0001302, [OBO_REL:results_in_developmental_progression_of=anon(accumulation during, anatomy), OBO_REL:unfolds_in=GO:0005728])] [Term] id: GO:0001310 ! extrachromosomal rDNA circle accumulation during replicative cell aging intersection_of: GO:0001302 ! replicative cell aging intersection_of: OBO_REL:results_in_developmental_progression_of anatomy:accumulation_during intersection_of: OBO_REL:unfolds_in GO:0005728 ! extrachromosomal rDNA circle synonym: "extrachromosomal ribosomal DNA circle accumulation during replicative cell ageing" EXACT [OBOL:automatic] ! seconds spent parsing GO:0001310: 17.59 ! Already have xp for: GO:0001402 signal transduction during filamentous growth ! CURRENT : signal transduction that OBO_REL:part_of filamentous growth [cdef(GO:0007165, [OBO_REL:part_of=GO:0030447])] ! No parse for: GO:0001403 invasive growth (sensu Saccharomyces) ! No parse for: GO:0001502 cartilage condensation ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0001503 using "bone biosynthesis" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=MA:0001459]) [-2] ! parse: GO:0001503 using "bone formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=MA:0001459]) [-2] ! parse: GO:0001503 using "bone formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=MA:0001459]) [-2] ! no existing xp def ! def: "The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of bone [cdef(GO:0048646, [OBO_REL:results_in_formation_of=MA:0001459])] [Term] id: GO:0001503 ! ossification intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of MA:0001459 ! bone ! seconds spent parsing GO:0001503: 18.07 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0001541 using "ovarian follicle development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0001110]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the ovarian follicle over time, from its formation to the mature structure." ! PROPOSED: developmental process that results_in_complete_developmental_of ovarian follicle [cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0001110])] [Term] id: GO:0001541 ! ovarian follicle development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of ZFA:0001110 ! ovarian follicle synonym: "egg follicle development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0001541: 12.39 ! No parse for: GO:0001542 ovulation (sensu Mammalia) ! No parse for: GO:0001543 ovarian follicle rupture ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0001548 using "ovarian follicle antrum/follicular fluid formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(antrum/follicular fluid, anatomy), OBO_REL:unfolds_in=ZFA:0001110]) [-25] ! no existing xp def ! def: "Formation of one central cavity separating the oocyte/cumulus complex from mural granulosa and theca cells." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of anon(antrum/follicular fluid, anatomy) and OBO_REL:unfolds_in ovarian follicle [cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(antrum/follicular fluid, anatomy), OBO_REL:unfolds_in=ZFA:0001110])] [Term] id: GO:0001548 ! follicular fluid formation in ovarian follicle antrum intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of anatomy:antrum_/_follicular_fluid intersection_of: OBO_REL:unfolds_in ZFA:0001110 ! ovarian follicle synonym: "egg follicle antrum/follicular fluid anatomical structure formation" EXACT [OBOL:automatic] synonym: "egg follicle antrum/follicular fluid formation" EXACT [OBOL:automatic] synonym: "egg follicle antrum/follicular fluid formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0001548: 22.1 ! Already have xp for: GO:0001549 cumulus cell differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of cumulus cell [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000711])] ! No parse for: GO:0001550 ovarian cumulus expansion ! No parse for: GO:0001551 ovarian follicle endowment ! No parse for: GO:0001552 ovarian follicle atresia ! Already have xp for: GO:0001555 oocyte growth ! CURRENT : growth that OBO_REL:results_in_increase_in_mass_of oocyte [cdef(GO:0040007, [OBO_REL:results_in_increase_in_mass_of=CL:0000023])] ! Already have xp for: GO:0001556 oocyte maturation ! CURRENT : developmental maturation that OBO_REL:results_in_developmental_progression_of oocyte [cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=CL:0000023])] ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0001568 using "blood vessel development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000060]) [-2] ! parse: GO:0001568 using "blood vessel development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(vessel, anatomy), OBO_REL:unfolds_in=MA:0000059]) [-8] ! parse: GO:0001568 using "blood vessel development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(vessel, anatomy), OBO_REL:unfolds_in=ZFA:0000007]) [-8] ! no existing xp def ! def: "The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood." ! PROPOSED: developmental process that results_in_complete_developmental_of blood vessel [cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000060])] [Term] id: GO:0001568 ! blood vessel development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of MA:0000060 ! blood vessel synonym: "vasculature development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0001568: 9.72 ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0001578 using "microtubule bundle formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(bundle, anatomy), OBO_REL:unfolds_in=GO:0005874]) [-8] ! no existing xp def ! def: "A process that results in a parallel arrangement of microtubules." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of anon(bundle, anatomy) and OBO_REL:unfolds_in microtubule [cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(bundle, anatomy), OBO_REL:unfolds_in=GO:0005874])] [Term] id: GO:0001578 ! microtubule bundle formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of anatomy:bundle intersection_of: OBO_REL:unfolds_in GO:0005874 ! microtubule synonym: "microtubule bundle anatomical structure formation" EXACT [OBOL:automatic] synonym: "microtubule bundle formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0001578: 18.56 ! Already have xp for: GO:0001649 osteoblast differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of osteoblast [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000062])] ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0001654 using "eye development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00004508]) [-2] ! parse: GO:0001654 using "eye development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000261]) [-2] ! parse: GO:0001654 using "eye development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000107]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the eye over time, from its formation to the mature structure. The eye is the organ of sight." ! PROPOSED: developmental process that results_in_complete_developmental_of eye [cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000107])] [Term] id: GO:0001654 ! eye development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of ZFA:0000107 ! eye ! seconds spent parsing GO:0001654: 5.94 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0001657 using "ureteric bud development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(ureteric bud, anatomy)]) [-13] ! no existing xp def ! def: "The process whose specific outcome is the progression of the ureteric bud over time, from its formation to the mature structure." ! PROPOSED: developmental process that results_in_complete_developmental_of anon(ureteric bud, anatomy) [cdef(GO:0032502, [results_in_complete_developmental_of=anon(ureteric bud, anatomy)])] [Term] id: GO:0001657 ! ureteric bud development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of anatomy:ureteric_bud ! seconds spent parsing GO:0001657: 4.21 ! No parse for: GO:0001658 ureteric bud branching ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0001675 using "acrosome formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=GO:0001669]) [-2] ! parse: GO:0001675 using "acrosome formation" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0001669]) [-2] ! parse: GO:0001675 using "acrosome formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0001669]) [-2] ! no existing xp def ! def: "The formation of the acrosome from the spermatid Golgi." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of acrosome [cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0001669])] [Term] id: GO:0001675 ! acrosome formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of GO:0001669 ! acrosome synonym: "acrosome anatomical structure formation" EXACT [OBOL:automatic] synonym: "acrosome formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0001675: 6.22 ! No parse for: GO:0001678 cell glucose homeostasis ! No parse for: GO:0001680 tRNA 3'-terminal CCA addition ! No parse for: GO:0001682 tRNA 5'-leader removal ! No parse for: GO:0001700 embryonic development via the syncytial blastoderm ! No relation defined: results_in_complete_developmental_of ! parse: GO:0001701 using "in utero embryonic development" => cdef(GO:0009790, [OBO_REL:results_in_developmental_progression_of=anon(in utero, anatomy)]) [-9] ! parse: GO:0001701 using "in utero embryonic development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(in utero embryonic, anatomy)]) [-19] ! no existing xp def ! def: "The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth." ! PROPOSED: embryonic development that OBO_REL:results_in_developmental_progression_of anon(in utero, anatomy) [cdef(GO:0009790, [OBO_REL:results_in_developmental_progression_of=anon(in utero, anatomy)])] [Term] id: GO:0001701 ! in utero embryonic development intersection_of: GO:0009790 ! embryonic development intersection_of: OBO_REL:results_in_developmental_progression_of anatomy:in_utero synonym: "in utero embryogenesis" EXACT [OBOL:automatic] synonym: "in utero embryonal development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0001701: 12.52 ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0001705 using "ectoderm formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=FBbt:00000111]) [-2] ! parse: GO:0001705 using "ectoderm formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=ZFA:0000016]) [-2] ! parse: GO:0001705 using "ectoderm formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=FBbt:00000111]) [-2] ! parse: GO:0001705 using "ectoderm formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0000016]) [-2] ! no existing xp def ! def: "The formation of ectoderm during gastrulation." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of ectoderm [cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0000016])] [Term] id: GO:0001705 ! ectoderm formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of ZFA:0000016 ! ectoderm ! seconds spent parsing GO:0001705: 6.17 ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0001706 using "endoderm formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=FBbt:00000125]) [-2] ! parse: GO:0001706 using "endoderm formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=ZFA:0000017]) [-2] ! parse: GO:0001706 using "endoderm formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=FBbt:00000125]) [-2] ! parse: GO:0001706 using "endoderm formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0000017]) [-2] ! no existing xp def ! def: "The formation of the endoderm during gastrulation." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of endoderm [cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0000017])] [Term] id: GO:0001706 ! endoderm formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of ZFA:0000017 ! endoderm ! seconds spent parsing GO:0001706: 6.17 ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0001707 using "mesoderm formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=FBbt:00000126]) [-2] ! parse: GO:0001707 using "mesoderm formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=ZFA:0000041]) [-2] ! parse: GO:0001707 using "mesoderm formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=FBbt:00000126]) [-2] ! parse: GO:0001707 using "mesoderm formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0000041]) [-2] ! no existing xp def ! def: "The process that gives rise to the mesoderm. This process pertains to the initial formation of the structure from unspecified parts." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of mesoderm [cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0000041])] [Term] id: GO:0001707 ! mesoderm formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of ZFA:0000041 ! mesoderm ! seconds spent parsing GO:0001707: 6.21 ! No parse for: GO:0001708 cell fate specification ! No parse for: GO:0001709 cell fate determination ! Already have xp for: GO:0001710 mesodermal cell fate commitment ! CURRENT : cell fate commitment that OBO_REL:results_in_commitment_to mesodermal cell [cdef(GO:0045165, [OBO_REL:results_in_commitment_to=CL:0000222])] ! Already have xp for: GO:0001711 endodermal cell fate commitment ! CURRENT : cell fate commitment that OBO_REL:results_in_commitment_to endodermal cell [cdef(GO:0045165, [OBO_REL:results_in_commitment_to=CL:0000223])] ! Already have xp for: GO:0001712 ectodermal cell fate commitment ! CURRENT : cell fate commitment that OBO_REL:results_in_commitment_to ectodermal cell [cdef(GO:0045165, [OBO_REL:results_in_commitment_to=CL:0000221])] ! Already have xp for: GO:0001713 ectodermal cell fate determination ! CURRENT : cell fate determination that OBO_REL:results_in_determination_to ectodermal cell [cdef(GO:0001709, [OBO_REL:results_in_determination_to=CL:0000221])] ! Already have xp for: GO:0001714 endodermal cell fate specification ! CURRENT : cell fate specification that OBO_REL:results_in_specification_of endodermal cell [cdef(GO:0001708, [OBO_REL:results_in_specification_of=CL:0000223])] ! Already have xp for: GO:0001715 ectodermal cell fate specification ! CURRENT : cell fate specification that OBO_REL:results_in_specification_of ectodermal cell [cdef(GO:0001708, [OBO_REL:results_in_specification_of=CL:0000221])] ! Already have xp for: GO:0001742 oenocyte differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of oenocyte [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000487])] ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0001743 using "optic placode formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=FBbt:00005495, OBO_REL:unfolds_in=ZFA:0000435]) [-3] ! parse: GO:0001743 using "optic placode formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=cdef(FBbt:00005495, [OBO_REL:part_of=ZFA:0000435])]) [-3] ! parse: GO:0001743 using "optic placode formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=FBbt:00005495, OBO_REL:unfolds_in=ZFA:0000435]) [-3] ! parse: GO:0001743 using "optic placode formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=cdef(FBbt:00005495, [OBO_REL:part_of=ZFA:0000435])]) [-3] ! no existing xp def ! def: "The initial developmental process that will lead to the formation of an eye." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of cdef(FBbt:00005495, [OBO_REL:part_of=ZFA:0000435]) [cdef(GO:0048646, [OBO_REL:results_in_formation_of=cdef(FBbt:00005495, [OBO_REL:part_of=ZFA:0000435])])] [Term] id: GO:0001743 ! optic placode formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of CN_-_II_P synonym: "CN-II placode formation" EXACT [OBOL:automatic] synonym: "cranial nerve II placode formation" EXACT [OBOL:automatic] synonym: "optic nerve placode formation" EXACT [OBOL:automatic] ! seconds spent parsing GO:0001743: 10.73 ! No parse for: GO:0001744 optic placode formation (sensu Endopterygota) ! parse: GO:0001745 using "compound eye morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00004508]) [-2] ! parse: GO:0001745 using "compound eye morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00004508, OBO_REL:unfolds_in=cell:compound]) [-3] ! parse: GO:0001745 using "compound eye morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000261, OBO_REL:unfolds_in=cell:compound]) [-3] ! parse: GO:0001745 using "compound eye morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0000107, OBO_REL:unfolds_in=cell:compound]) [-3] ! parse: GO:0001745 using "compound eye morphogenesis" => cdef(GO:0048592, [OBO_REL:results_in_developmental_progression_of=cell:compound]) [-2] ! parse: GO:0001745 using "compound eye morphogenesis (sensu Endopterygota)" => cdef(GO:0048592, [OBO_REL:results_in_developmental_progression_of=cell:compound]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of the compound eye are generated and organized. Morphogenesis pertains to the creation of form. The adult compound eye is a precise assembly of 700-800 ommatidia. Each ommatidia is composed of 20 cells, identified by cell type and position." ! PROPOSED: eye morphogenesis that OBO_REL:results_in_developmental_progression_of compound [cdef(GO:0048592, [OBO_REL:results_in_developmental_progression_of=cell:compound])] [Term] id: GO:0001745 ! compound eye morphogenesis intersection_of: GO:0048592 ! eye morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of cell:compound ! compound ! seconds spent parsing GO:0001745: 42.13 ! parse: GO:0001746 using "Bolwig's organ morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00005805]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of the larval eye in Drosophila are generated and organized. Morphogenesis pertains to the creation of form. The larval eye in Drosophila is a relatively simple sensory system composed of Bolwig's organs: two clusters, each composed of 12 photoreceptor cells from which axons extend in a single fascicle to the brain." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of Bolwig's organ [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00005805])] [Term] id: GO:0001746 ! Bolwig's organ morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of FBbt:00005805 ! Bolwig's organ synonym: "Bolwig ' s organ morphogenesis" EXACT [OBOL:automatic] ! seconds spent parsing GO:0001746: 5.46 ! parse: GO:0001748 using "embryonic eye morphogenesis (sensu Endopterygota)" => cdef(GO:0048592, [OBO_REL:part_of=GO:0009790]) [-2] ! parse: GO:0001748 using "embryonic eye morphogenesis (sensu Endopterygota)" => cdef(GO:0048592, [OBO_REL:results_in_developmental_progression_of=anon(embryonic, anatomy)]) [-10] ! no existing xp def ! def: "The process whose specific outcome is the progression of the optic placode over time, from its formation to the mature structure. During embryonic stage 12 the placode starts to invaginate, forming a pouch. Cells that will form Bolwig's organ segregate from the ventral lip of this pouch, remaining in the head epidermis. The remainder of the invagination loses contact with the outer surface and becomes the optic lobe. As in, but not restricted to, the Holometabola (Endopterygota, ncbi_taxonomy_id:33392)." ! PROPOSED: eye morphogenesis that OBO_REL:part_of embryonic development [cdef(GO:0048592, [OBO_REL:part_of=GO:0009790])] [Term] id: GO:0001748 ! optic placode development (sensu Endopterygota) intersection_of: GO:0048592 ! eye morphogenesis intersection_of: OBO_REL:part_of GO:0009790 ! embryonic development synonym: "embryogenesis, eye morphogenesis" EXACT [OBOL:automatic] synonym: "embryogenesis, eye morphogenesis (sensu Endopterygota)" EXACT [OBOL:automatic] synonym: "embryonal development, eye morphogenesis" EXACT [OBOL:automatic] synonym: "embryonal development, eye morphogenesis (sensu Endopterygota)" EXACT [OBOL:automatic] synonym: "embryonic development, eye morphogenesis" EXACT [OBOL:automatic] synonym: "embryonic development, eye morphogenesis (sensu Endopterygota)" EXACT [OBOL:automatic] synonym: "embryonic eye morphogenesis" EXACT [OBOL:automatic] def: "A eye morphogenesis (sensu Endopterygota) that is part of a embryogenesis" [OBOL:automatic] ! seconds spent parsing GO:0001748: 19.0 ! Already have xp for: GO:0001751 compound eye photoreceptor cell differentiation ! CURRENT : eye photoreceptor cell differentiation that OBO_REL:results_in_developmental_progression_of compound [cdef(GO:0001754, [OBO_REL:results_in_developmental_progression_of=cell:compound])] ! No parse for: GO:0001752 compound eye photoreceptor fate commitment ! Already have xp for: GO:0001754 eye photoreceptor cell differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of eye photoreceptor cell [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000287])] ! Already have xp for: GO:0001755 neural crest cell migration ! CURRENT : cell migration that OBO_REL:results_in_movement_of neural crest cell [cdef(GO:0016477, [OBO_REL:results_in_movement_of=CL:0000333])] ! No parse for: GO:0001756 somitogenesis ! parse: GO:0001757 using "somite specification" => cdef(GO:0007389, [OBO_REL:results_in_specification_of=ZFA:0000155]) [-2] ! no existing xp def ! def: "The process by which individual somites establish identity during embryogenesis." ! PROPOSED: pattern specification process that OBO_REL:results_in_specification_of somite [cdef(GO:0007389, [OBO_REL:results_in_specification_of=ZFA:0000155])] [Term] id: GO:0001757 ! somite specification intersection_of: GO:0007389 ! pattern specification process intersection_of: OBO_REL:results_in_specification_of ZFA:0000155 ! somite synonym: "somitic mesoderm specification" EXACT [OBOL:automatic] ! seconds spent parsing GO:0001757: 4.68 ! Already have xp for: GO:0001764 neuron migration ! CURRENT : cell migration that OBO_REL:results_in_movement_of neuron [cdef(GO:0016477, [OBO_REL:results_in_movement_of=CL:0000540])] ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0001765 using "lipid raft formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=GO:0045121]) [-2] ! parse: GO:0001765 using "lipid raft formation" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0045121]) [-2] ! parse: GO:0001765 using "lipid raft formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0045121]) [-2] ! no existing xp def ! def: "Formation of tightly-packed gel-like membrane microdomains enriched in sphingolipids and cholesterol." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of lipid raft [cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0045121])] [Term] id: GO:0001765 ! lipid raft formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of GO:0045121 ! lipid raft synonym: "lipid raft anatomical structure formation" EXACT [OBOL:automatic] synonym: "lipid raft formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0001765: 6.22 ! No parse for: GO:0001766 lipid raft polarization ! Already have xp for: GO:0001767 establishment of lymphocyte polarity ! CURRENT : establishment of cell polarity that OBO_REL:regulates_polarity_of lymphocyte [cdef(GO:0030010, [OBO_REL:regulates_polarity_of=CL:0000542])] ! Already have xp for: GO:0001768 establishment of T cell polarity ! CURRENT : establishment of cell polarity that OBO_REL:regulates_polarity_of T cell [cdef(GO:0030010, [OBO_REL:regulates_polarity_of=CL:0000084])] ! Already have xp for: GO:0001769 establishment of B cell polarity ! CURRENT : establishment of cell polarity that OBO_REL:regulates_polarity_of B cell [cdef(GO:0030010, [OBO_REL:regulates_polarity_of=CL:0000236])] ! Already have xp for: GO:0001770 establishment of natural killer cell polarity ! CURRENT : establishment of cell polarity that OBO_REL:regulates_polarity_of natural killer cell [cdef(GO:0030010, [OBO_REL:regulates_polarity_of=CL:0000623])] ! Already have xp for: GO:0001774 microglial cell activation ! CURRENT : cell activation that OBO_REL:results_in_change_to microglial cell [cdef(GO:0001775, [OBO_REL:results_in_change_to=CL:0000129])] ! No parse for: GO:0001775 cell activation ! Already have xp for: GO:0001776 leukocyte homeostasis ! CURRENT : homeostasis of number of cells that OBO_REL:regulates_population_size_of leukocyte [cdef(GO:0048872, [OBO_REL:regulates_population_size_of=CL:0000738])] ! Already have xp for: GO:0001777 T cell homeostatic proliferation ! CURRENT : cell homeostasis that OBO_REL:increases_population_size_of T cell [cdef(GO:0019725, [OBO_REL:increases_population_size_of=CL:0000084])] ! No parse for: GO:0001778 plasma membrane repair ! Already have xp for: GO:0001779 natural killer cell differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of natural killer cell [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000623])] ! Already have xp for: GO:0001780 neutrophil homeostasis ! CURRENT : homeostasis of number of cells that OBO_REL:regulates_population_size_of neutrophil [cdef(GO:0048872, [OBO_REL:regulates_population_size_of=CL:0000775])] ! Already have xp for: GO:0001781 neutrophil apoptosis ! CURRENT : apoptosis that OBO_REL:results_in_death_of neutrophil [cdef(GO:0006915, [OBO_REL:results_in_death_of=CL:0000775])] ! Already have xp for: GO:0001782 B cell homeostasis ! CURRENT : homeostasis of number of cells that OBO_REL:regulates_population_size_of B cell [cdef(GO:0048872, [OBO_REL:regulates_population_size_of=CL:0000236])] ! Already have xp for: GO:0001783 B cell apoptosis ! CURRENT : apoptosis that OBO_REL:results_in_death_of B cell [cdef(GO:0006915, [OBO_REL:results_in_death_of=CL:0000236])] ! Already have xp for: GO:0001787 natural killer cell proliferation ! CURRENT : cell proliferation that OBO_REL:increases_population_size_of natural killer cell [cdef(GO:0008283, [OBO_REL:increases_population_size_of=CL:0000623])] ! parse: GO:0001788 using "antibody dependent cell death" => cdef(GO:0008219, [OBO_REL:results_in_developmental_progression_of=anon(antibody dependent, anatomy)]) [-19] ! parse: GO:0001788 using "antibody dependent cell death" => cdef(GO:0016265, [OBO_REL:results_in_developmental_progression_of=anon(antibody dependent cell, anatomy)]) [-24] ! parse: GO:0001788 using "antibody-dependent cell death" => cdef(GO:0008219, [OBO_REL:dependent_on=GO:0003823]) [-2] ! parse: GO:0001788 using "antibody-dependent cell death" => cdef(GO:0008219, [OBO_REL:results_in_developmental_progression_of=anon(antibody-dependent, anatomy)]) [-19] ! parse: GO:0001788 using "antibody-dependent cell death" => cdef(GO:0016265, [OBO_REL:results_in_developmental_progression_of=anon(antibody-dependent cell, anatomy)]) [-24] ! parse: GO:0001788 using "antibody-dependent cell death" => cdef(cdef(GO:0016265, [OBO_REL:results_in_developmental_progression_of=CL:0000000]), [OBO_REL:dependent_on=GO:0003823]) [-3] ! parse: GO:0001788 using "antibody-dependent cell death" => cdef(cdef(GO:0016265, [OBO_REL:results_in_developmental_progression_of=ZFA:0009000]), [OBO_REL:dependent_on=GO:0003823]) [-3] ! parse: GO:0001788 using "antibody-dependent cell killing" => cdef(GO:0001906, [OBO_REL:dependent_on=GO:0003823]) [-2] ! no existing xp def ! def: "Cytolysis of target cells by natural killer cells, eosinophils, neutrophils, monocytes, or macrophages following engagement of antibodies bound to the target cells by Fc receptors on the effector cells." ! PROPOSED: cell death that OBO_REL:dependent_on antigen binding [cdef(GO:0008219, [OBO_REL:dependent_on=GO:0003823])] [Term] id: GO:0001788 ! antibody-dependent cellular cytotoxicity intersection_of: GO:0008219 ! cell death intersection_of: OBO_REL:dependent_on GO:0003823 ! antigen binding synonym: "B cell receptor activity-dependent cell death" EXACT [OBOL:automatic] synonym: "B cell receptor activity-dependent necrosis" EXACT [OBOL:automatic] synonym: "antibody-dependent necrosis" EXACT [OBOL:automatic] synonym: "antigen binding-dependent cell death" EXACT [OBOL:automatic] synonym: "antigen binding-dependent necrosis" EXACT [OBOL:automatic] synonym: "immunoglobulin-dependent cell death" EXACT [OBOL:automatic] synonym: "immunoglobulin-dependent necrosis" EXACT [OBOL:automatic] synonym: "opsonin activity-dependent cell death" EXACT [OBOL:automatic] synonym: "opsonin activity-dependent necrosis" EXACT [OBOL:automatic] ! seconds spent parsing GO:0001788: 63.16 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0001822 using "kidney development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000368]) [-2] ! parse: GO:0001822 using "kidney development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000151]) [-2] ! parse: GO:0001822 using "kidney development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000529]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine." ! PROPOSED: developmental process that results_in_complete_developmental_of kidney [cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000529])] [Term] id: GO:0001822 ! kidney development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of ZFA:0000529 ! kidney ! seconds spent parsing GO:0001822: 6.03 ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0001838 using "embryonic epithelial tube formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(embryonic epithelial tube, anatomy)]) [-26] ! parse: GO:0001838 using "embryonic epithelial tube formation" => cdef(cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(epithelial tube, anatomy)]), [OBO_REL:part_of=GO:0009790]) [-17] ! no existing xp def ! def: "The morphogenesis of an embryonic epithelium into a tube-shaped structure." ! PROPOSED: cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(epithelial tube, anatomy)]) that OBO_REL:part_of embryonic development [cdef(cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(epithelial tube, anatomy)]), [OBO_REL:part_of=GO:0009790])] [Term] id: GO:0001838 ! embryonic epithelial tube formation intersection_of: epithelial_tube_anatomical_structure_formation intersection_of: OBO_REL:part_of GO:0009790 ! embryonic development synonym: "embryogenesis, epithelial tube anatomical structure formation" EXACT [OBOL:automatic] synonym: "embryogenesis, epithelial tube formation" EXACT [OBOL:automatic] synonym: "embryogenesis, epithelial tube formation of an anatomical structure" EXACT [OBOL:automatic] synonym: "embryonal development, epithelial tube anatomical structure formation" EXACT [OBOL:automatic] synonym: "embryonal development, epithelial tube formation" EXACT [OBOL:automatic] synonym: "embryonal development, epithelial tube formation of an anatomical structure" EXACT [OBOL:automatic] synonym: "embryonic development, epithelial tube anatomical structure formation" EXACT [OBOL:automatic] synonym: "embryonic development, epithelial tube formation" EXACT [OBOL:automatic] synonym: "embryonic development, epithelial tube formation of an anatomical structure" EXACT [OBOL:automatic] synonym: "embryonic epithelial tube anatomical structure formation" EXACT [OBOL:automatic] synonym: "embryonic epithelial tube formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0001838: 8.21 ! parse: GO:0001839 using "neural plate morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0000132]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of the neural plate are generated and organized. Morphogenesis pertains to the creation of form. The neural plate is a specialized region of columnar epithelial cells in the dorsal ectoderm that will give rise to nervous system tissue." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of neural plate [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0000132])] [Term] id: GO:0001839 ! neural plate morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0000132 ! neural plate synonym: "presumptive central nervous system anatomical structure morphogenesis" EXACT [OBOL:automatic] synonym: "presumptive central nervous system morphogenesis" EXACT [OBOL:automatic] ! seconds spent parsing GO:0001839: 5.14 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0001840 using "neural plate development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000132]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the neural plate over time, from its formation to the mature structure. The neural plate is a flat, thickened layer of ectodermal cells. The underlying dorsal mesoderm signals the ectodermal cells above it to elongate into columnar neural plate cells. The neural plate subsequently develops into the neural tube, which gives rise to the central nervous system." ! PROPOSED: developmental process that results_in_complete_developmental_of neural plate [cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000132])] [Term] id: GO:0001840 ! neural plate development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of ZFA:0000132 ! neural plate synonym: "presumptive central nervous system development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0001840: 4.71 ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0001841 using "neural tube formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=ZFA:0001135]) [-2] ! parse: GO:0001841 using "neural tube formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0001135]) [-2] ! parse: GO:0001841 using "neural tube morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0001135]) [-2] ! no existing xp def ! def: "The formation of a tube from the flat layer of ectodermal cells known as the neural plate. This will give rise to the central nervous system." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of neural tube [cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0001135])] [Term] id: GO:0001841 ! neural tube formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of ZFA:0001135 ! neural tube synonym: "presumptive central nervous system anatomical structure formation" EXACT [OBOL:automatic] synonym: "presumptive central nervous system formation" EXACT [OBOL:automatic] synonym: "presumptive central nervous system formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0001841: 14.86 ! parse: GO:0001843 using "neural tube closure" => cdef(GO:0032502, [OBO_REL:results_in_closure_of=ZFA:0001135]) [-2] ! no existing xp def ! def: "The last step in the formation of the neural tube, where the paired neural folds are brought together and fuse at the dorsal midline." ! PROPOSED: developmental process that OBO_REL:results_in_closure_of neural tube [cdef(GO:0032502, [OBO_REL:results_in_closure_of=ZFA:0001135])] [Term] id: GO:0001843 ! neural tube closure intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_closure_of ZFA:0001135 ! neural tube synonym: "presumptive central nervous system closure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0001843: 8.82 ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0001845 using "late phagosome biosynthesis" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=GO:0032010]) [-2] ! parse: GO:0001845 using "late phagosome formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=GO:0032010]) [-2] ! parse: GO:0001845 using "late phagosome formation" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0032010]) [-2] ! parse: GO:0001845 using "late phagosome formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0032010]) [-2] ! parse: GO:0001845 using "phagolysosome formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=GO:0032010]) [-2] ! parse: GO:0001845 using "phagolysosome formation" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0032010]) [-2] ! parse: GO:0001845 using "phagolysosome formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0032010]) [-2] ! no existing xp def ! def: "The process by which a phagosome, a vesicle formed by phagocytosis, fuses with a lysosome." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of phagolysosome [cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0032010])] [Term] id: GO:0001845 ! phagolysosome formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of GO:0032010 ! phagolysosome synonym: "late phagocytic vesicle anatomical structure formation" EXACT [OBOL:automatic] synonym: "late phagocytic vesicle formation" EXACT [OBOL:automatic] synonym: "late phagocytic vesicle formation of an anatomical structure" EXACT [OBOL:automatic] synonym: "late phagosome anatomical structure formation" EXACT [OBOL:automatic] synonym: "late phagosome formation of an anatomical structure" EXACT [OBOL:automatic] synonym: "phagolysosome anatomical structure formation" EXACT [OBOL:automatic] synonym: "phagolysosome formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0001845: 18.78 ! Already have xp for: GO:0001885 endothelial cell development ! CURRENT : developmental process that OBO_REL:results_in_developmental_progression_of endothelial cell [cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=CL:0000115])] ! Already have xp for: GO:0001886 endothelial cell morphogenesis ! CURRENT : anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of endothelial cell [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=CL:0000115])] ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0001889 using "liver development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000358]) [-2] ! parse: GO:0001889 using "liver development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000123]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the liver over time, from its formation to the mature structure. The liver is an exocrine gland which secretes bile and functions in metabolism of protein and carbohydrate and fat, synthesizes substances involved in the clotting of the blood, synthesizes vitamin A, detoxifies poisonous substances, stores glycogen, and breaks down worn-out erythrocytes." ! PROPOSED: developmental process that results_in_complete_developmental_of liver [cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000123])] [Term] id: GO:0001889 ! liver development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of ZFA:0000123 ! liver ! seconds spent parsing GO:0001889: 5.3 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0001890 using "placenta development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000386]) [-2] ! parse: GO:0001890 using "placental development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(placental, anatomy)]) [-10] ! no existing xp def ! def: "The process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin." ! PROPOSED: developmental process that results_in_complete_developmental_of placenta [cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000386])] [Term] id: GO:0001890 ! placenta development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of MA:0000386 ! placenta ! seconds spent parsing GO:0001890: 8.74 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0001892 using "embryonic placenta development" => cdef(GO:0001890, [OBO_REL:part_of=GO:0009790]) [-2] ! parse: GO:0001892 using "embryonic placenta development" => cdef(GO:0001890, [OBO_REL:results_in_developmental_progression_of=anon(embryonic, anatomy)]) [-10] ! parse: GO:0001892 using "embryonic placenta development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(embryonic placenta, anatomy)]) [-19] ! parse: GO:0001892 using "embryonic placenta development" => cdef(cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000386]), [OBO_REL:part_of=GO:0009790]) [-3] ! no existing xp def ! def: "The embryonically driven process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin." ! PROPOSED: placenta development that OBO_REL:part_of embryonic development [cdef(GO:0001890, [OBO_REL:part_of=GO:0009790])] [Term] id: GO:0001892 ! embryonic placenta development intersection_of: GO:0001890 ! placenta development intersection_of: OBO_REL:part_of GO:0009790 ! embryonic development synonym: "embryogenesis, placenta development" EXACT [OBOL:automatic] synonym: "embryogenesis, placental development" EXACT [OBOL:automatic] synonym: "embryonal development, placenta development" EXACT [OBOL:automatic] synonym: "embryonal development, placental development" EXACT [OBOL:automatic] synonym: "embryonic development, placenta development" EXACT [OBOL:automatic] synonym: "embryonic development, placental development" EXACT [OBOL:automatic] synonym: "embryonic placental development" EXACT [OBOL:automatic] def: "A placenta development that is part of a embryogenesis" [OBOL:automatic] ! seconds spent parsing GO:0001892: 4.38 ! No parse for: GO:0001894 tissue homeostasis ! No parse for: GO:0001906 cell killing ! Already have xp for: GO:0001909 leukocyte mediated cytotoxicity ! CURRENT : cell death that OBO_REL:mediated_by leukocyte [cdef(GO:0008219, [OBO_REL:mediated_by=CL:0000738])] ! Already have xp for: GO:0001913 T cell mediated cytotoxicity ! CURRENT : cell death that OBO_REL:mediated_by T cell [cdef(GO:0008219, [OBO_REL:mediated_by=CL:0000084])] ! parse: GO:0001927 using "exocyst assembly" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0000145]) [-2] ! no existing xp def ! def: "The aggregation and bonding together of various polypeptides into the exocyst complex." ! PROPOSED: cellular component assembly that OBO_REL:results_in_creation_of exocyst [cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0000145])] [Term] id: GO:0001927 ! exocyst assembly intersection_of: GO:0022607 ! cellular component assembly intersection_of: OBO_REL:results_in_creation_of GO:0000145 ! exocyst synonym: "assembly and maintenance of exocyst" EXACT [OBOL:automatic] synonym: "assembly of exocyst" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of exocyst" EXACT [OBOL:automatic] synonym: "biogenesis of exocyst" EXACT [OBOL:automatic] synonym: "cell structure assembly of exocyst" EXACT [OBOL:automatic] synonym: "cellular component assembly of exocyst" EXACT [OBOL:automatic] synonym: "complex assembly of exocyst" EXACT [OBOL:automatic] synonym: "exocyst assembly and maintenance" EXACT [OBOL:automatic] synonym: "exocyst biogenesis" EXACT [OBOL:automatic] synonym: "exocyst biogenesis and assembly" EXACT [OBOL:automatic] synonym: "exocyst cell structure assembly" EXACT [OBOL:automatic] synonym: "exocyst cellular component assembly" EXACT [OBOL:automatic] synonym: "exocyst complex assembly" EXACT [OBOL:automatic] synonym: "exocyst formation" EXACT [OBOL:automatic] synonym: "formation of exocyst" EXACT [OBOL:automatic] def: "The aggregation and bonding together of a set of macromolecules to form a exocyst" [OBOL:automatic] ! seconds spent parsing GO:0001927: 5.62 ! Already have xp for: GO:0001935 endothelial cell proliferation ! CURRENT : cell proliferation that OBO_REL:increases_population_size_of endothelial cell [cdef(GO:0008283, [OBO_REL:increases_population_size_of=CL:0000115])] ! parse: GO:0001941 using "postsynaptic membrane organization" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0045211]) [-2] ! no existing xp def ! def: "The maintenance of membrane compostition in a postsynaptic membrane, the specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft)." ! PROPOSED: cellular component organization and biogenesis that OBO_REL:results_in_structural_change_to postsynaptic membrane [cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0045211])] [Term] id: GO:0001941 ! postsynaptic membrane organization intersection_of: GO:0016043 ! cellular component organization and biogenesis intersection_of: OBO_REL:results_in_structural_change_to GO:0045211 ! postsynaptic membrane synonym: "postsynaptic membrane organization and biogenesis" EXACT [OBOL:automatic] ! seconds spent parsing GO:0001941: 18.64 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0001942 using "hair follicle development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=FBbt:00004894, OBO_REL:unfolds_in=FBbt:00005182]) [-3] ! parse: GO:0001942 using "hair follicle development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00004894, OBO_REL:unfolds_in=FBbt:00005182]) [-3] ! parse: GO:0001942 using "hair follicle development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000154]) [-2] ! parse: GO:0001942 using "hair follicle development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(FBbt:00004894, [OBO_REL:part_of=FBbt:00005182])]) [-3] ! no existing xp def ! def: "The process whose specific outcome is the progression of the hair follicle over time, from its formation to the mature structure. A hair follicle is a tube-like opening in the epidermis where the hair shaft develops and into which the sebaceous glands open." ! PROPOSED: developmental process that results_in_complete_developmental_of hair follicle [cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000154])] [Term] id: GO:0001942 ! hair follicle development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of MA:0000154 ! hair follicle ! seconds spent parsing GO:0001942: 10.67 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0001944 using "vasculature development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000060]) [-2] ! parse: GO:0001944 using "vasculature development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0001079]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the vasculature over time, from its formation to the mature structure." ! PROPOSED: developmental process that results_in_complete_developmental_of vasculature [cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0001079])] [Term] id: GO:0001944 ! vasculature development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of ZFA:0001079 ! vasculature synonym: "blood vessels development" EXACT [OBOL:automatic] synonym: "circulatory system development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0001944: 5.29 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0001945 using "lymph vessel development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0005105]) [-2] ! parse: GO:0001945 using "lymph vessel development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(vessel, anatomy), OBO_REL:unfolds_in=MA:0002520]) [-8] ! no existing xp def ! def: "The process whose specific outcome is the progression of the lymphatic vasculature over time, from its formation to the mature structure." ! PROPOSED: developmental process that results_in_complete_developmental_of lymph vessel [cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0005105])] [Term] id: GO:0001945 ! lymph vessel development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of ZFA:0005105 ! lymph vessel ! seconds spent parsing GO:0001945: 5.27 ! No parse for: GO:0001946 lymphangiogenesis ! No parse for: GO:0001947 heart looping ! parse: GO:0001949 using "sebaceous gland cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000000, OBO_REL:unfolds_in=MA:0002565]) [-3] ! parse: GO:0001949 using "sebaceous gland cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(sebaceous gland, cell)]) [-16] ! parse: GO:0001949 using "sebaceous gland cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(sebaceous gland cell, cell)]) [-21] ! no existing xp def ! def: "Process whereby a relatively unspecialized epidermal cell acquires the specialized features of a sebaceous gland cell." ! PROPOSED: cell differentiation that OBO_REL:results_in_acquisition_of_features_of cell and OBO_REL:unfolds_in sebaceous gland [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000000, OBO_REL:unfolds_in=MA:0002565])] [Term] id: GO:0001949 ! sebaceous gland cell differentiation intersection_of: GO:0030154 ! cell differentiation intersection_of: OBO_REL:results_in_acquisition_of_features_of CL:0000000 ! cell intersection_of: OBO_REL:unfolds_in MA:0002565 ! sebaceous gland ! seconds spent parsing GO:0001949: 14.65 ! parse: GO:0001955 using "blood vessel maturation" => cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=MA:0000060]) [-2] ! no existing xp def ! def: "A developmental process, independent of morphogenetic (shape) change, that is required for a blood vessel to attain its fully functional state." ! PROPOSED: developmental maturation that OBO_REL:results_in_developmental_progression_of blood vessel [cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=MA:0000060])] [Term] id: GO:0001955 ! blood vessel maturation intersection_of: GO:0021700 ! developmental maturation intersection_of: OBO_REL:results_in_developmental_progression_of MA:0000060 ! blood vessel synonym: "vasculature developmental maturation" EXACT [OBOL:automatic] synonym: "vasculature maturation" EXACT [OBOL:automatic] ! seconds spent parsing GO:0001955: 13.38 ! No parse for: GO:0001974 blood vessel remodeling ! No parse for: GO:0001980 ischemic regulation of blood pressure ! No parse for: GO:0002026 cardiac inotropy ! No parse for: GO:0002027 cardiac chronotropy ! No parse for: GO:0002035 brain renin-angiotensin system ! Already have xp for: GO:0002042 cell migration during sprouting angiogenesis ! CURRENT : cell migration that OBO_REL:part_of sprouting angiogenesis [cdef(GO:0016477, [OBO_REL:part_of=GO:0002040])] ! Already have xp for: GO:0002043 blood vessel endothelial cell proliferation during sprouting angiogenesis ! CURRENT : blood_vessel_endothelial_cell_proliferation that OBO_REL:part_of sprouting angiogenesis [cdef(blood_vessel_endothelial_cell_proliferation, [OBO_REL:part_of=GO:0002040])] ! Already have xp for: GO:0002044 blood vessel endothelial cell migration during intussusceptive angiogenesis ! CURRENT : blood vessel endothelial cell migration that OBO_REL:part_of intussusceptive angiogenesis [cdef(GO:0043534, [OBO_REL:part_of=GO:0002041])] ! Already have xp for: GO:0002051 osteoblast fate commitment ! CURRENT : cell fate commitment that OBO_REL:results_in_commitment_to osteoblast [cdef(GO:0045165, [OBO_REL:results_in_commitment_to=CL:0000062])] ! Already have xp for: GO:0002062 chondrocyte differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of chondrocyte [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000138])] ! Already have xp for: GO:0002063 chondrocyte development ! CURRENT : developmental process that OBO_REL:results_in_developmental_progression_of chondrocyte [cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=CL:0000138])] ! Already have xp for: GO:0002064 epithelial cell development ! CURRENT : developmental process that OBO_REL:results_in_developmental_progression_of epithelial cell [cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=CL:0000066])] ! Already have xp for: GO:0002065 columnar/cuboidal epithelial cell differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of columnar/cuboidal epithelial cell [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000075])] ! Already have xp for: GO:0002066 columnar/cuboidal epithelial cell development ! CURRENT : developmental process that OBO_REL:results_in_developmental_progression_of columnar/cuboidal epithelial cell [cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=CL:0000075])] ! Already have xp for: GO:0002067 glandular epithelial cell differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of glandular epithelial cell [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000150])] ! Already have xp for: GO:0002068 glandular epithelial cell development ! CURRENT : developmental process that OBO_REL:results_in_developmental_progression_of glandular epithelial cell [cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=CL:0000150])] ! Already have xp for: GO:0002069 columnar/cuboidal epithelial cell maturation ! CURRENT : developmental maturation that OBO_REL:results_in_developmental_progression_of columnar/cuboidal epithelial cell [cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=CL:0000075])] ! Already have xp for: GO:0002070 epithelial cell maturation ! CURRENT : developmental maturation that OBO_REL:results_in_developmental_progression_of epithelial cell [cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=CL:0000066])] ! Already have xp for: GO:0002071 glandular epithelial cell maturation ! CURRENT : developmental maturation that OBO_REL:results_in_developmental_progression_of glandular epithelial cell [cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=CL:0000150])] ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0002072 using "optic cup morphogenesis involved in camera-style eye development" => cdef(GO:0001654, [OBO_REL:results_in_developmental_progression_of=anon(cup morphogenesis involved in camera-style, anatomy), OBO_REL:unfolds_in=ZFA:0000435]) [-44] ! parse: GO:0002072 using "optic cup morphogenesis involved in camera-style eye development" => cdef(GO:0001654, [OBO_REL:results_in_developmental_progression_of=anon(morphogenesis involved in camera-style, anatomy), OBO_REL:unfolds_in=ZFA:0001202]) [-40] ! parse: GO:0002072 using "optic cup morphogenesis involved in camera-style eye development" => cdef(GO:0009653, [OBO_REL:part_of=cdef(GO:0001654, [OBO_REL:results_in_developmental_progression_of=anon(camera-style, anatomy)]), OBO_REL:unfolds_in=ZFA:0001202]) [-15] ! parse: GO:0002072 using "optic cup morphogenesis involved in camera-style eye development" => cdef(GO:0009653, [OBO_REL:part_of=cdef(GO:0032502, [results_in_complete_developmental_of=anon(camera-style eye, anatomy)]), OBO_REL:unfolds_in=ZFA:0001202]) [-19] ! parse: GO:0002072 using "optic cup morphogenesis involved in camera-style eye development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(cup morphogenesis involved in camera-style eye, anatomy), OBO_REL:unfolds_in=ZFA:0000435]) [-48] ! parse: GO:0002072 using "optic cup morphogenesis involved in camera-style eye development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(morphogenesis involved in camera-style eye, anatomy), OBO_REL:unfolds_in=ZFA:0001202]) [-44] ! parse: GO:0002072 using "optic cup morphogenesis involved in camera-style eye development" => cdef(cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0001202]), [OBO_REL:part_of=cdef(GO:0001654, [OBO_REL:results_in_developmental_progression_of=anon(camera-style, anatomy)])]) [-15] ! parse: GO:0002072 using "optic cup morphogenesis involved in camera-style eye development" => cdef(cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0001202]), [OBO_REL:part_of=cdef(GO:0032502, [results_in_complete_developmental_of=anon(camera-style eye, anatomy)])]) [-19] ! parse: GO:0002072 using "optic cup morphogenesis involved in camera-style eye development" => cdef(cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(cup, anatomy)]), [OBO_REL:part_of=cdef(GO:0001654, [OBO_REL:results_in_developmental_progression_of=anon(camera-style, anatomy)]), OBO_REL:unfolds_in=ZFA:0000435]) [-18] ! parse: GO:0002072 using "optic cup morphogenesis involved in camera-style eye development" => cdef(cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(cup, anatomy)]), [OBO_REL:part_of=cdef(GO:0032502, [results_in_complete_developmental_of=anon(camera-style eye, anatomy)]), OBO_REL:unfolds_in=ZFA:0000435]) [-22] ! parse: GO:0002072 using "optic cup morphogenesis involved in camera-style eye development" => cdef(cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(cup, anatomy), OBO_REL:unfolds_in=ZFA:0000435]), [OBO_REL:part_of=cdef(GO:0001654, [OBO_REL:results_in_developmental_progression_of=anon(camera-style, anatomy)])]) [-18] ! parse: GO:0002072 using "optic cup morphogenesis involved in camera-style eye development" => cdef(cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(cup, anatomy), OBO_REL:unfolds_in=ZFA:0000435]), [OBO_REL:part_of=cdef(GO:0032502, [results_in_complete_developmental_of=anon(camera-style eye, anatomy)])]) [-22] ! parse: GO:0002072 using "optic cup morphogenesis involved in camera-type eye development" => cdef(GO:0001654, [OBO_REL:results_in_developmental_progression_of=anon(cup morphogenesis involved in camera-type, anatomy), OBO_REL:unfolds_in=ZFA:0000435]) [-43] ! parse: GO:0002072 using "optic cup morphogenesis involved in camera-type eye development" => cdef(GO:0001654, [OBO_REL:results_in_developmental_progression_of=anon(morphogenesis involved in camera-type, anatomy), OBO_REL:unfolds_in=ZFA:0001202]) [-39] ! parse: GO:0002072 using "optic cup morphogenesis involved in camera-type eye development" => cdef(GO:0009653, [OBO_REL:part_of=GO:0043010, OBO_REL:unfolds_in=ZFA:0001202]) [-3] ! parse: GO:0002072 using "optic cup morphogenesis involved in camera-type eye development" => cdef(GO:0009653, [OBO_REL:part_of=cdef(GO:0001654, [OBO_REL:results_in_developmental_progression_of=anon(camera-type, anatomy)]), OBO_REL:unfolds_in=ZFA:0001202]) [-14] ! parse: GO:0002072 using "optic cup morphogenesis involved in camera-type eye development" => cdef(GO:0009653, [OBO_REL:part_of=cdef(GO:0032502, [results_in_complete_developmental_of=anon(camera-type eye, anatomy)]), OBO_REL:unfolds_in=ZFA:0001202]) [-18] ! parse: GO:0002072 using "optic cup morphogenesis involved in camera-type eye development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(cup morphogenesis involved in camera-type eye, anatomy), OBO_REL:unfolds_in=ZFA:0000435]) [-47] ! parse: GO:0002072 using "optic cup morphogenesis involved in camera-type eye development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(morphogenesis involved in camera-type eye, anatomy), OBO_REL:unfolds_in=ZFA:0001202]) [-43] ! parse: GO:0002072 using "optic cup morphogenesis involved in camera-type eye development" => cdef(GO:0043010, [OBO_REL:results_in_developmental_progression_of=anon(cup morphogenesis involved in, anatomy), OBO_REL:unfolds_in=ZFA:0000435]) [-31] ! parse: GO:0002072 using "optic cup morphogenesis involved in camera-type eye development" => cdef(GO:0043010, [OBO_REL:results_in_developmental_progression_of=anon(morphogenesis involved in, anatomy), OBO_REL:unfolds_in=ZFA:0001202]) [-27] ! parse: GO:0002072 using "optic cup morphogenesis involved in camera-type eye development" => cdef(cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0001202]), [OBO_REL:part_of=GO:0043010]) [-3] ! parse: GO:0002072 using "optic cup morphogenesis involved in camera-type eye development" => cdef(cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0001202]), [OBO_REL:part_of=cdef(GO:0001654, [OBO_REL:results_in_developmental_progression_of=anon(camera-type, anatomy)])]) [-14] ! parse: GO:0002072 using "optic cup morphogenesis involved in camera-type eye development" => cdef(cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0001202]), [OBO_REL:part_of=cdef(GO:0032502, [results_in_complete_developmental_of=anon(camera-type eye, anatomy)])]) [-18] ! parse: GO:0002072 using "optic cup morphogenesis involved in camera-type eye development" => cdef(cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(cup, anatomy)]), [OBO_REL:part_of=GO:0043010, OBO_REL:unfolds_in=ZFA:0000435]) [-6] ! parse: GO:0002072 using "optic cup morphogenesis involved in camera-type eye development" => cdef(cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(cup, anatomy)]), [OBO_REL:part_of=cdef(GO:0001654, [OBO_REL:results_in_developmental_progression_of=anon(camera-type, anatomy)]), OBO_REL:unfolds_in=ZFA:0000435]) [-17] ! parse: GO:0002072 using "optic cup morphogenesis involved in camera-type eye development" => cdef(cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(cup, anatomy)]), [OBO_REL:part_of=cdef(GO:0032502, [results_in_complete_developmental_of=anon(camera-type eye, anatomy)]), OBO_REL:unfolds_in=ZFA:0000435]) [-21] ! parse: GO:0002072 using "optic cup morphogenesis involved in camera-type eye development" => cdef(cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(cup, anatomy), OBO_REL:unfolds_in=ZFA:0000435]), [OBO_REL:part_of=GO:0043010]) [-6] ! parse: GO:0002072 using "optic cup morphogenesis involved in camera-type eye development" => cdef(cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(cup, anatomy), OBO_REL:unfolds_in=ZFA:0000435]), [OBO_REL:part_of=cdef(GO:0001654, [OBO_REL:results_in_developmental_progression_of=anon(camera-type, anatomy)])]) [-17] ! parse: GO:0002072 using "optic cup morphogenesis involved in camera-type eye development" => cdef(cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(cup, anatomy), OBO_REL:unfolds_in=ZFA:0000435]), [OBO_REL:part_of=cdef(GO:0032502, [results_in_complete_developmental_of=anon(camera-type eye, anatomy)])]) [-21] ! no existing xp def ! def: "The invagination of the optic vesicle to form two-walled indentations, the optic cups, that will go on to form the retina. This process begins with the optic vesicle becoming a two-walled structure and its subsequent shape changes. It does not include the fate commitment of cells to become the pigmented retina and the neural retina." ! PROPOSED: cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0001202]) that OBO_REL:part_of camera-type eye development [cdef(cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0001202]), [OBO_REL:part_of=GO:0043010])] [Term] id: GO:0002072 ! optic cup morphogenesis involved in camera-type eye development intersection_of: eye_cup_anatomical_structure_morphogenesis intersection_of: OBO_REL:part_of GO:0043010 ! camera-type eye development synonym: "eye development (sensu Actinopterygii) , eye cup anatomical structure morphogenesis" EXACT [OBOL:automatic] synonym: "eye development (sensu Actinopterygii) , eye cup morphogenesis" EXACT [OBOL:automatic] synonym: "eye development (sensu Mammalia) , eye cup anatomical structure morphogenesis" EXACT [OBOL:automatic] synonym: "eye development (sensu Mammalia) , eye cup morphogenesis" EXACT [OBOL:automatic] synonym: "eye development (sensu Vertebrata) , eye cup anatomical structure morphogenesis" EXACT [OBOL:automatic] synonym: "eye development (sensu Vertebrata) , eye cup morphogenesis" EXACT [OBOL:automatic] ! seconds spent parsing GO:0002072: 53.88 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0002074 using "extraocular skeletal muscle development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0001271]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the extraocular skeletal muscle over time, from its formation to the mature structure. The extraocular muscle is derived from cranial mesoderm. The muscle begins its development with the differentiation of the muscle cells and ends with the mature muscle." ! PROPOSED: developmental process that results_in_complete_developmental_of extraocular skeletal muscle [cdef(GO:0032502, [results_in_complete_developmental_of=MA:0001271])] [Term] id: GO:0002074 ! extraocular skeletal muscle development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of MA:0001271 ! extraocular skeletal muscle ! seconds spent parsing GO:0002074: 9.92 ! No parse for: GO:0002075 somitomeric trunk muscle development (sensu Mammalia) ! Already have xp for: GO:0002076 osteoblast development ! CURRENT : developmental process that OBO_REL:results_in_developmental_progression_of osteoblast [cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=CL:0000062])] ! No parse for: GO:0002077 acrosome matrix dispersal ! Already have xp for: GO:0002078 membrane fusion during acrosome reaction ! CURRENT : membrane fusion that OBO_REL:part_of acrosome reaction [cdef(GO:0006944, [OBO_REL:part_of=GO:0007340])] ! No relation defined: results_in_contraction_of ! parse: GO:0002086 using "diaphragm contraction" => cdef(GO:0008150, [results_in_contraction_of=MA:0001904]) [-2] ! no existing xp def ! def: "A process leading to shortening and/or development of tension in the diaphragm. The diaphragm is a striated muscle that is necessary for the process of respiratory gaseous exchange." ! PROPOSED: biological_process that results_in_contraction_of diaphragm [cdef(GO:0008150, [results_in_contraction_of=MA:0001904])] [Term] id: GO:0002086 ! diaphragm contraction intersection_of: GO:0008150 ! biological_process intersection_of: results_in_contraction_of MA:0001904 ! diaphragm ! seconds spent parsing GO:0002086: 8.34 ! Already have xp for: GO:0002093 auditory receptor cell morphogenesis ! CURRENT : anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of auditory receptor cell [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=CL:0000201])] ! No parse for: GO:0002097 tRNA wobble base modification ! No parse for: GO:0002098 tRNA wobble uridine modification ! No parse for: GO:0002099 tRNA wobble guanine modification ! No parse for: GO:0002100 tRNA wobble adenosine to inosine editing ! No parse for: GO:0002101 tRNA wobble cytosine modification ! No parse for: GO:0002117 larval development (sensu Amphibia) ! No parse for: GO:0002119 larval development (sensu Nematoda) ! No relation defined: results_in_complete_developmental_of ! parse: GO:0002164 using "larval development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(larval, anatomy)]) [-7] ! no existing xp def ! def: "The process whose specific outcome is the progression of the larva over time, from its formation to the mature structure. The larva is the early, immature form of any animal when more or less of a metamorphosis takes place, before the assumption of the mature shape." ! PROPOSED: developmental process that results_in_complete_developmental_of anon(larval, anatomy) [cdef(GO:0032502, [results_in_complete_developmental_of=anon(larval, anatomy)])] [Term] id: GO:0002164 ! larval development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of anatomy:larval ! seconds spent parsing GO:0002164: 4.05 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0002165 using "instar larval or pupal development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(instar larval or pupal, anatomy)]) [-23] ! parse: GO:0002165 using "instar larval or pupal development" => cdef(GO:0035209, [OBO_REL:results_in_developmental_progression_of=anon(instar larval or, anatomy)]) [-17] ! parse: GO:0002165 using "larval or pupal development (sensu Insecta)" => cdef(GO:0035209, [OBO_REL:results_in_developmental_progression_of=anon(larval or, anatomy)]) [-10] ! no existing xp def ! def: "The process whose specific outcome is the progression of the instar larva or pupa over time, from its formation to the mature structure." ! PROPOSED: pupal development that OBO_REL:results_in_developmental_progression_of anon(larval or, anatomy) [cdef(GO:0035209, [OBO_REL:results_in_developmental_progression_of=anon(larval or, anatomy)])] [Term] id: GO:0002165 ! instar larval or pupal development intersection_of: GO:0035209 ! pupal development intersection_of: OBO_REL:results_in_developmental_progression_of anatomy:larval_or synonym: "larval or pupal development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0002165: 8.69 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0002168 using "instar larval development" => cdef(GO:0002164, [OBO_REL:results_in_developmental_progression_of=anon(instar, anatomy)]) [-7] ! parse: GO:0002168 using "instar larval development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(instar larval, anatomy)]) [-14] ! no existing xp def ! def: "The process whose specific outcome is the progression of the larva over time, from its formation to the mature structure. This begins with the newly hatched first-instar larva, through its maturation to the end of the last larval stage." ! PROPOSED: larval development that OBO_REL:results_in_developmental_progression_of anon(instar, anatomy) [cdef(GO:0002164, [OBO_REL:results_in_developmental_progression_of=anon(instar, anatomy)])] [Term] id: GO:0002168 ! instar larval development intersection_of: GO:0002164 ! larval development intersection_of: OBO_REL:results_in_developmental_progression_of anatomy:instar ! seconds spent parsing GO:0002168: 8.62 ! No parse for: GO:0002200 somatic diversification of immune receptors ! No parse for: GO:0002201 somatic diversification of DSCAM-based immune receptors ! No parse for: GO:0002202 somatic diversification of variable lymphocyte receptors of jawless fish ! No parse for: GO:0002204 somatic recombination of immunoglobulin genes during immune response ! Already have xp for: GO:0002205 somatic hypermutation of immunoglobulin genes during immune response ! CURRENT : somatic hypermutation of immunoglobulin genes that OBO_REL:part_of immune response [cdef(GO:0016446, [OBO_REL:part_of=GO:0006955])] ! Already have xp for: GO:0002208 somatic diversification of immunoglobulins during immune response ! CURRENT : somatic diversification of immunoglobulins that OBO_REL:part_of immune response [cdef(GO:0016445, [OBO_REL:part_of=GO:0006955])] ! Already have xp for: GO:0002228 natural killer cell mediated immunity ! CURRENT : immune system process that OBO_REL:mediated_by natural killer cell [cdef(GO:0002376, [OBO_REL:mediated_by=CL:0000623])] ! Already have xp for: GO:0002232 leukocyte chemotaxis during inflammatory response ! CURRENT : leukocyte chemotaxis that OBO_REL:part_of inflammatory response [cdef(GO:0030595, [OBO_REL:part_of=GO:0006954])] ! Already have xp for: GO:0002233 leukocyte chemotaxis during immune response ! CURRENT : leukocyte chemotaxis that OBO_REL:part_of immune response [cdef(GO:0030595, [OBO_REL:part_of=GO:0006955])] ! Already have xp for: GO:0002244 hemopoietic progenitor cell differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of hematopoietic progenitor cell [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000837])] ! No parse for: GO:0002248 connective tissue replacement during inflammatory response ! Already have xp for: GO:0002249 lymphocyte anergy ! CURRENT : immune system process that OBO_REL:inactivates lymphocyte [cdef(GO:0002376, [OBO_REL:inactivates=CL:0000542])] ! No parse for: GO:0002251 organ or tissue specific immune response ! No parse for: GO:0002255 tissue kallikrein-kinin cascade ! No parse for: GO:0002259 endothelial cell activation within high endothelial venule during immune response ! Already have xp for: GO:0002260 lymphocyte homeostasis ! CURRENT : homeostasis of number of cells that OBO_REL:regulates_population_size_of lymphocyte [cdef(GO:0048872, [OBO_REL:regulates_population_size_of=CL:0000542])] ! Already have xp for: GO:0002262 myeloid cell homeostasis ! CURRENT : homeostasis of number of cells that OBO_REL:regulates_population_size_of myeloid cell [cdef(GO:0048872, [OBO_REL:regulates_population_size_of=CL:0000763])] ! Already have xp for: GO:0002263 cell activation during immune response ! CURRENT : cell activation that OBO_REL:part_of immune response [cdef(GO:0001775, [OBO_REL:part_of=GO:0006955])] ! Already have xp for: GO:0002264 endothelial cell activation during immune response ! CURRENT : endothelial cell activation that OBO_REL:part_of immune response [cdef(GO:0042118, [OBO_REL:part_of=GO:0006955])] ! Already have xp for: GO:0002265 astrocyte activation during immune response ! CURRENT : astrocyte activation that OBO_REL:part_of immune response [cdef(GO:0048143, [OBO_REL:part_of=GO:0006955])] ! Already have xp for: GO:0002269 leukocyte activation during inflammatory response ! CURRENT : leukocyte activation that OBO_REL:part_of inflammatory response [cdef(GO:0045321, [OBO_REL:part_of=GO:0006954])] ! Already have xp for: GO:0002270 plasmacytoid dendritic cell activation ! CURRENT : cell activation that OBO_REL:results_in_change_to plasmacytoid dendritic cell [cdef(GO:0001775, [OBO_REL:results_in_change_to=CL:0000784])] ! Already have xp for: GO:0002271 plasmacytoid dendritic cell activation during immune response ! CURRENT : plasmacytoid dendritic cell activation that OBO_REL:part_of immune response [cdef(GO:0002270, [OBO_REL:part_of=GO:0006955])] ! Already have xp for: GO:0002272 plasmacytoid dendritic cell differentiation during immune response ! CURRENT : plasmacytoid dendritic cell differentiation that OBO_REL:part_of immune response [cdef(GO:0002273, [OBO_REL:part_of=GO:0006955])] ! Already have xp for: GO:0002273 plasmacytoid dendritic cell differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of plasmacytoid dendritic cell [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000784])] ! Already have xp for: GO:0002274 myeloid leukocyte activation ! CURRENT : cell activation that OBO_REL:results_in_change_to myeloid leukocyte [cdef(GO:0001775, [OBO_REL:results_in_change_to=CL:0000766])] ! Already have xp for: GO:0002275 myeloid cell activation during immune response ! CURRENT : myeloid_cell_activation that OBO_REL:part_of immune response [cdef(myeloid_cell_activation, [OBO_REL:part_of=GO:0006955])] ! Already have xp for: GO:0002280 monocyte activation during immune response ! CURRENT : monocyte activation that OBO_REL:part_of immune response [cdef(GO:0042117, [OBO_REL:part_of=GO:0006955])] ! Already have xp for: GO:0002281 macrophage activation during immune response ! CURRENT : macrophage activation that OBO_REL:part_of immune response [cdef(GO:0042116, [OBO_REL:part_of=GO:0006955])] ! Already have xp for: GO:0002282 microglial cell activation during immune response ! CURRENT : microglial cell activation that OBO_REL:part_of immune response [cdef(GO:0001774, [OBO_REL:part_of=GO:0006955])] ! Already have xp for: GO:0002283 neutrophil activation during immune response ! CURRENT : neutrophil activation that OBO_REL:part_of immune response [cdef(GO:0042119, [OBO_REL:part_of=GO:0006955])] ! Already have xp for: GO:0002285 lymphocyte activation during immune response ! CURRENT : lymphocyte activation that OBO_REL:part_of immune response [cdef(GO:0046649, [OBO_REL:part_of=GO:0006955])] ! Already have xp for: GO:0002286 T cell activation during immune response ! CURRENT : T cell activation that OBO_REL:part_of immune response [cdef(GO:0042110, [OBO_REL:part_of=GO:0006955])] ! Already have xp for: GO:0002287 alpha-beta T cell activation during immune response ! CURRENT : alpha-beta T cell activation that OBO_REL:part_of immune response [cdef(GO:0046631, [OBO_REL:part_of=GO:0006955])] ! Already have xp for: GO:0002290 gamma-delta T cell activation during immune response ! CURRENT : gamma-delta T cell activation that OBO_REL:part_of immune response [cdef(GO:0046629, [OBO_REL:part_of=GO:0006955])] ! No parse for: GO:0002291 T cell activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell ! Already have xp for: GO:0002292 T cell differentiation during immune response ! CURRENT : T cell differentiation that OBO_REL:part_of immune response [cdef(GO:0030217, [OBO_REL:part_of=GO:0006955])] ! Already have xp for: GO:0002293 alpha-beta T cell differentiation during immune response ! CURRENT : alpha-beta T cell differentiation that OBO_REL:part_of immune response [cdef(GO:0046632, [OBO_REL:part_of=GO:0006955])] ! Already have xp for: GO:0002303 gamma-delta T cell differentiation during immune response ! CURRENT : gamma-delta T cell differentiation that OBO_REL:part_of immune response [cdef(GO:0042492, [OBO_REL:part_of=GO:0006955])] ! Already have xp for: GO:0002304 gamma-delta intraepithelial T cell differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of gamma-delta intraepithelial T cell [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000801])] ! Already have xp for: GO:0002309 T cell proliferation during immune response ! CURRENT : T cell proliferation that OBO_REL:part_of immune response [cdef(GO:0042098, [OBO_REL:part_of=GO:0006955])] ! Already have xp for: GO:0002310 alpha-beta T cell proliferation during immune response ! CURRENT : alpha-beta T cell proliferation that OBO_REL:part_of immune response [cdef(GO:0046633, [OBO_REL:part_of=GO:0006955])] ! Already have xp for: GO:0002311 gamma-delta T cell proliferation during immune response ! CURRENT : gamma-delta T cell proliferation that OBO_REL:part_of immune response [cdef(GO:0046630, [OBO_REL:part_of=GO:0006955])] ! Already have xp for: GO:0002312 B cell activation during immune response ! CURRENT : B cell activation that OBO_REL:part_of immune response [cdef(GO:0042113, [OBO_REL:part_of=GO:0006955])] ! Already have xp for: GO:0002313 mature B cell differentiation during immune response ! CURRENT : mature B cell differentiation that OBO_REL:part_of immune response [cdef(GO:0002335, [OBO_REL:part_of=GO:0006955])] ! Already have xp for: GO:0002314 germinal center B cell differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of germinal center B cell [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000844])] ! Already have xp for: GO:0002315 marginal zone B cell differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of marginal zone B cell [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000845])] ! Already have xp for: GO:0002317 plasma cell differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of plasma cell [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000786])] ! Already have xp for: GO:0002318 myeloid progenitor cell differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of myeloid progenitor cell [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000839])] ! Already have xp for: GO:0002319 memory B cell differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of memory B cell [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000787])] ! Already have xp for: GO:0002320 lymphoid progenitor cell differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of lymphoid progenitor cell [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000838])] ! Already have xp for: GO:0002321 natural killer cell progenitor differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of natural killer cell progenitor [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000825])] ! Already have xp for: GO:0002322 B cell proliferation during immune response ! CURRENT : B cell proliferation that OBO_REL:part_of immune response [cdef(GO:0042100, [OBO_REL:part_of=GO:0006955])] ! Already have xp for: GO:0002323 natural killer cell activation during immune response ! CURRENT : natural killer cell activation that OBO_REL:part_of immune response [cdef(GO:0030101, [OBO_REL:part_of=GO:0006955])] ! Already have xp for: GO:0002324 natural killer cell proliferation during immune response ! CURRENT : natural killer cell proliferation that OBO_REL:part_of immune response [cdef(GO:0001787, [OBO_REL:part_of=GO:0006955])] ! Already have xp for: GO:0002325 natural killer cell differentiation during immune response ! CURRENT : natural killer cell differentiation that OBO_REL:part_of immune response [cdef(GO:0001779, [OBO_REL:part_of=GO:0006955])] ! Already have xp for: GO:0002326 B cell lineage commitment ! CURRENT : cell fate commitment that OBO_REL:results_in_commitment_to B cell [cdef(GO:0045165, [OBO_REL:results_in_commitment_to=CL:0000236])] ! Already have xp for: GO:0002327 immature B cell differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of immature B cell [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000816])] ! Already have xp for: GO:0002328 pro-B cell differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of pro-B cell [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000826])] ! Already have xp for: GO:0002329 pre-B cell differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of pre-B cell [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000817])] ! No parse for: GO:0002330 pre-B cell receptor expression ! No parse for: GO:0002331 pre-B cell allelic exclusion ! Already have xp for: GO:0002332 transitional stage B cell differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of transitional stage B cell [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000818])] ! Already have xp for: GO:0002335 mature B cell differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of mature B cell [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000785])] ! Already have xp for: GO:0002339 B cell selection ! CURRENT : biological_process that OBO_REL:results_in_selection_of B cell [cdef(GO:0008150, [OBO_REL:results_in_selection_of=CL:0000236])] ! No parse for: GO:0002340 central B cell selection ! No parse for: GO:0002341 central B cell anergy ! parse: GO:0002342 using "central B cell deletion" => cdef(GO:0002516, [OBO_REL:results_in_developmental_progression_of=anon(central, anatomy)]) [-8] ! parse: GO:0002342 using "central B lymphocyte deletion" => cdef(GO:0002516, [OBO_REL:results_in_developmental_progression_of=anon(central, anatomy)]) [-8] ! parse: GO:0002342 using "central B-cell deletion" => cdef(GO:0002516, [OBO_REL:results_in_developmental_progression_of=anon(central, anatomy)]) [-8] ! parse: GO:0002342 using "central B-lymphocyte deletion" => cdef(GO:0002516, [OBO_REL:results_in_developmental_progression_of=anon(central, anatomy)]) [-8] ! no existing xp def ! def: "The deletion of B cells by apoptosis occurring as part of central tolerance induction and B cell selection." ! PROPOSED: B cell deletion that OBO_REL:results_in_developmental_progression_of anon(central, anatomy) [cdef(GO:0002516, [OBO_REL:results_in_developmental_progression_of=anon(central, anatomy)])] [Term] id: GO:0002342 ! central B cell deletion intersection_of: GO:0002516 ! B cell deletion intersection_of: OBO_REL:results_in_developmental_progression_of anatomy:central ! seconds spent parsing GO:0002342: 20.51 ! No parse for: GO:0002344 B cell affinity maturation ! No parse for: GO:0002346 B cell positive selection ! No parse for: GO:0002348 central B cell positive selection ! No parse for: GO:0002352 B cell negative selection ! No parse for: GO:0002353 plasma kallikrein-kinin cascade ! No parse for: GO:0002354 central B cell negative selection ! Already have xp for: GO:0002358 B cell homeostatic proliferation ! CURRENT : cell homeostasis that OBO_REL:increases_population_size_of B cell [cdef(GO:0019725, [OBO_REL:increases_population_size_of=CL:0000236])] ! Already have xp for: GO:0002360 T cell lineage commitment ! CURRENT : cell fate commitment that OBO_REL:results_in_commitment_to T cell [cdef(GO:0045165, [OBO_REL:results_in_commitment_to=CL:0000084])] ! Already have xp for: GO:0002363 alpha-beta T cell lineage commitment ! CURRENT : cell fate commitment that OBO_REL:results_in_commitment_to alpha-beta T cell [cdef(GO:0045165, [OBO_REL:results_in_commitment_to=CL:0000789])] ! Already have xp for: GO:0002365 gamma-delta T cell lineage commitment ! CURRENT : cell fate commitment that OBO_REL:results_in_commitment_to gamma-delta T cell [cdef(GO:0045165, [OBO_REL:results_in_commitment_to=CL:0000798])] ! Already have xp for: GO:0002366 leukocyte activation during immune response ! CURRENT : leukocyte activation that OBO_REL:part_of immune response [cdef(GO:0045321, [OBO_REL:part_of=GO:0006955])] ! Already have xp for: GO:0002368 B cell cytokine production ! CURRENT : cytokine production that OBO_REL:results_in_creation_or_release_of B cell [cdef(GO:0001816, [OBO_REL:results_in_creation_or_release_of=CL:0000236])] ! Already have xp for: GO:0002369 T cell cytokine production ! CURRENT : cytokine production that OBO_REL:results_in_creation_or_release_of T cell [cdef(GO:0001816, [OBO_REL:results_in_creation_or_release_of=CL:0000084])] ! Already have xp for: GO:0002370 natural killer cell cytokine production ! CURRENT : cytokine production that OBO_REL:results_in_creation_or_release_of natural killer cell [cdef(GO:0001816, [OBO_REL:results_in_creation_or_release_of=CL:0000623])] ! Already have xp for: GO:0002371 dendritic cell cytokine production ! CURRENT : cytokine production that OBO_REL:results_in_creation_or_release_of dendritic cell [cdef(GO:0001816, [OBO_REL:results_in_creation_or_release_of=CL:0000451])] ! Already have xp for: GO:0002373 plasmacytoid dendritic cell cytokine production ! CURRENT : cytokine production that OBO_REL:results_in_creation_or_release_of plasmacytoid dendritic cell [cdef(GO:0001816, [OBO_REL:results_in_creation_or_release_of=CL:0000784])] ! No parse for: GO:0002376 immune system process ! No parse for: GO:0002377 immunoglobulin production ! No parse for: GO:0002378 immunoglobulin biosynthetic process ! Already have xp for: GO:0002379 immunoglobulin biosynthetic process during immune response ! CURRENT : immunoglobulin biosynthetic process that OBO_REL:part_of immune response [cdef(GO:0002378, [OBO_REL:part_of=GO:0006955])] ! Already have xp for: GO:0002380 immunoglobulin secretion during immune response ! CURRENT : immunoglobulin secretion that OBO_REL:part_of immune response [cdef(GO:0048305, [OBO_REL:part_of=GO:0006955])] ! Already have xp for: GO:0002381 immunoglobulin production during immune response ! CURRENT : immunoglobulin production that OBO_REL:part_of immune response [cdef(GO:0002377, [OBO_REL:part_of=GO:0006955])] ! No parse for: GO:0002390 platelet activating factor production ! Already have xp for: GO:0002391 platelet activating factor production during acute inflammatory response ! CURRENT : platelet activating factor production that OBO_REL:part_of acute inflammatory response [cdef(GO:0002390, [OBO_REL:part_of=GO:0002526])] ! No parse for: GO:0002392 platelet activating factor secretion ! parse: GO:0002396 using "MHC protein complex assembly" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0042611]) [-2] ! no existing xp def ! def: "The aggregation and bonding together of a set of components to form an MHC protein complex." ! PROPOSED: cellular component assembly that OBO_REL:results_in_creation_of MHC protein complex [cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0042611])] [Term] id: GO:0002396 ! MHC protein complex assembly intersection_of: GO:0022607 ! cellular component assembly intersection_of: OBO_REL:results_in_creation_of GO:0042611 ! MHC protein complex synonym: "MHC protein complex assembly and maintenance" EXACT [OBOL:automatic] synonym: "MHC protein complex biogenesis" EXACT [OBOL:automatic] synonym: "MHC protein complex biogenesis and assembly" EXACT [OBOL:automatic] synonym: "MHC protein complex cell structure assembly" EXACT [OBOL:automatic] synonym: "MHC protein complex cellular component assembly" EXACT [OBOL:automatic] synonym: "MHC protein complex complex assembly" EXACT [OBOL:automatic] synonym: "MHC protein complex formation" EXACT [OBOL:automatic] synonym: "assembly and maintenance of MHC protein complex" EXACT [OBOL:automatic] synonym: "assembly of MHC protein complex" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of MHC protein complex" EXACT [OBOL:automatic] synonym: "biogenesis of MHC protein complex" EXACT [OBOL:automatic] synonym: "cell structure assembly of MHC protein complex" EXACT [OBOL:automatic] synonym: "cellular component assembly of MHC protein complex" EXACT [OBOL:automatic] synonym: "complex assembly of MHC protein complex" EXACT [OBOL:automatic] synonym: "formation of MHC protein complex" EXACT [OBOL:automatic] def: "The aggregation and bonding together of a set of macromolecules to form a MHC protein complex" [OBOL:automatic] ! seconds spent parsing GO:0002396: 5.6 ! parse: GO:0002397 using "MHC class I protein complex assembly" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0042612]) [-2] ! no existing xp def ! def: "The aggregation and bonding together of a set of components to form an MHC class I protein complex. Class I here refers to classical class I molecules." ! PROPOSED: cellular component assembly that OBO_REL:results_in_creation_of MHC class I protein complex [cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0042612])] [Term] id: GO:0002397 ! MHC class I protein complex assembly intersection_of: GO:0022607 ! cellular component assembly intersection_of: OBO_REL:results_in_creation_of GO:0042612 ! MHC class I protein complex synonym: "MHC class I protein complex assembly and maintenance" EXACT [OBOL:automatic] synonym: "MHC class I protein complex biogenesis" EXACT [OBOL:automatic] synonym: "MHC class I protein complex biogenesis and assembly" EXACT [OBOL:automatic] synonym: "MHC class I protein complex cell structure assembly" EXACT [OBOL:automatic] synonym: "MHC class I protein complex cellular component assembly" EXACT [OBOL:automatic] synonym: "MHC class I protein complex complex assembly" EXACT [OBOL:automatic] synonym: "MHC class I protein complex formation" EXACT [OBOL:automatic] synonym: "assembly and maintenance of MHC class I protein complex" EXACT [OBOL:automatic] synonym: "assembly of MHC class I protein complex" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of MHC class I protein complex" EXACT [OBOL:automatic] synonym: "biogenesis of MHC class I protein complex" EXACT [OBOL:automatic] synonym: "cell structure assembly of MHC class I protein complex" EXACT [OBOL:automatic] synonym: "cellular component assembly of MHC class I protein complex" EXACT [OBOL:automatic] synonym: "complex assembly of MHC class I protein complex" EXACT [OBOL:automatic] synonym: "formation of MHC class I protein complex" EXACT [OBOL:automatic] def: "The aggregation and bonding together of a set of macromolecules to form a MHC class I protein complex" [OBOL:automatic] ! seconds spent parsing GO:0002397: 5.62 ! parse: GO:0002398 using "MHC class Ib protein complex assembly" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0032398]) [-2] ! no existing xp def ! def: "The aggregation and bonding together of a set of components to form an MHC class Ib protein complex. Class Ib here refers to non-classical class I molecules." ! PROPOSED: cellular component assembly that OBO_REL:results_in_creation_of MHC class Ib protein complex [cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0032398])] [Term] id: GO:0002398 ! MHC class Ib protein complex assembly intersection_of: GO:0022607 ! cellular component assembly intersection_of: OBO_REL:results_in_creation_of GO:0032398 ! MHC class Ib protein complex synonym: "MHC class Ib protein complex assembly and maintenance" EXACT [OBOL:automatic] synonym: "MHC class Ib protein complex biogenesis" EXACT [OBOL:automatic] synonym: "MHC class Ib protein complex biogenesis and assembly" EXACT [OBOL:automatic] synonym: "MHC class Ib protein complex cell structure assembly" EXACT [OBOL:automatic] synonym: "MHC class Ib protein complex cellular component assembly" EXACT [OBOL:automatic] synonym: "MHC class Ib protein complex complex assembly" EXACT [OBOL:automatic] synonym: "MHC class Ib protein complex formation" EXACT [OBOL:automatic] synonym: "assembly and maintenance of MHC class Ib protein complex" EXACT [OBOL:automatic] synonym: "assembly of MHC class Ib protein complex" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of MHC class Ib protein complex" EXACT [OBOL:automatic] synonym: "biogenesis of MHC class Ib protein complex" EXACT [OBOL:automatic] synonym: "cell structure assembly of MHC class Ib protein complex" EXACT [OBOL:automatic] synonym: "cellular component assembly of MHC class Ib protein complex" EXACT [OBOL:automatic] synonym: "complex assembly of MHC class Ib protein complex" EXACT [OBOL:automatic] synonym: "formation of MHC class Ib protein complex" EXACT [OBOL:automatic] def: "The aggregation and bonding together of a set of macromolecules to form a MHC class Ib protein complex" [OBOL:automatic] ! seconds spent parsing GO:0002398: 5.63 ! parse: GO:0002399 using "MHC class II protein complex assembly" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0042613]) [-2] ! no existing xp def ! def: "The aggregation and bonding together of a set of components to form an MHC class II protein complex." ! PROPOSED: cellular component assembly that OBO_REL:results_in_creation_of MHC class II protein complex [cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0042613])] [Term] id: GO:0002399 ! MHC class II protein complex assembly intersection_of: GO:0022607 ! cellular component assembly intersection_of: OBO_REL:results_in_creation_of GO:0042613 ! MHC class II protein complex synonym: "MHC class II protein complex assembly and maintenance" EXACT [OBOL:automatic] synonym: "MHC class II protein complex biogenesis" EXACT [OBOL:automatic] synonym: "MHC class II protein complex biogenesis and assembly" EXACT [OBOL:automatic] synonym: "MHC class II protein complex cell structure assembly" EXACT [OBOL:automatic] synonym: "MHC class II protein complex cellular component assembly" EXACT [OBOL:automatic] synonym: "MHC class II protein complex complex assembly" EXACT [OBOL:automatic] synonym: "MHC class II protein complex formation" EXACT [OBOL:automatic] synonym: "assembly and maintenance of MHC class II protein complex" EXACT [OBOL:automatic] synonym: "assembly of MHC class II protein complex" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of MHC class II protein complex" EXACT [OBOL:automatic] synonym: "biogenesis of MHC class II protein complex" EXACT [OBOL:automatic] synonym: "cell structure assembly of MHC class II protein complex" EXACT [OBOL:automatic] synonym: "cellular component assembly of MHC class II protein complex" EXACT [OBOL:automatic] synonym: "complex assembly of MHC class II protein complex" EXACT [OBOL:automatic] synonym: "formation of MHC class II protein complex" EXACT [OBOL:automatic] def: "The aggregation and bonding together of a set of macromolecules to form a MHC class II protein complex" [OBOL:automatic] ! seconds spent parsing GO:0002399: 5.62 ! Already have xp for: GO:0002402 B cell tolerance induction in mucosal-associated lymphoid tissue ! CURRENT : tolerance induction in mucosal-associated lymphoid tissue that OBO_REL:mediated_by B cell [cdef(GO:0002401, [OBO_REL:mediated_by=CL:0000236])] ! Already have xp for: GO:0002403 T cell tolerance induction in mucosal-associated lymphoid tissue ! CURRENT : tolerance induction in mucosal-associated lymphoid tissue that OBO_REL:mediated_by T cell [cdef(GO:0002401, [OBO_REL:mediated_by=CL:0000084])] ! Already have xp for: GO:0002407 dendritic cell chemotaxis ! CURRENT : chemotaxis that OBO_REL:results_in_movement_of dendritic cell [cdef(GO:0006935, [OBO_REL:results_in_movement_of=CL:0000451])] ! Already have xp for: GO:0002410 plasmacytoid dendritic cell chemotaxis ! CURRENT : chemotaxis that OBO_REL:results_in_movement_of plasmacytoid dendritic cell [cdef(GO:0006935, [OBO_REL:results_in_movement_of=CL:0000784])] ! Already have xp for: GO:0002411 T cell tolerance induction to tumor cell ! CURRENT : tolerance induction to tumor cell that OBO_REL:mediated_by T cell [cdef(GO:0002413, [OBO_REL:mediated_by=CL:0000084])] ! No parse for: GO:0002414 immunoglobulin transcytosis in epithelial cells ! No parse for: GO:0002415 immunoglobulin transcytosis in epithelial cells mediated by polymeric immunoglobulin receptor ! No parse for: GO:0002417 B cell antigen processing and presentation mediated by B cell receptor uptake of antigen ! No parse for: GO:0002419 T cell mediated cytotoxicity directed against tumor cell target ! No parse for: GO:0002420 natural killer cell mediated cytotoxicity directed against tumor cell target ! Already have xp for: GO:0002421 B cell antigen processing and presentation following pinocytosis ! CURRENT : antigen processing and presentation following pinocytosis that OBO_REL:mediated_by B cell [cdef(GO:0002746, [OBO_REL:mediated_by=CL:0000236])] ! Already have xp for: GO:0002423 natural killer cell mediated immune response to tumor cell ! CURRENT : immune response to tumor cell that OBO_REL:mediated_by natural killer cell [cdef(GO:0002418, [OBO_REL:mediated_by=CL:0000623])] ! Already have xp for: GO:0002424 T cell mediated immune response to tumor cell ! CURRENT : immune response to tumor cell that OBO_REL:mediated_by T cell [cdef(GO:0002418, [OBO_REL:mediated_by=CL:0000084])] ! No parse for: GO:0002426 immunoglobulin production in mucosal tissue ! No parse for: GO:0002433 phagocytosis triggered by activation of immune response cell surface activating receptor ! Already have xp for: GO:0002443 leukocyte mediated immunity ! CURRENT : immune system process that OBO_REL:mediated_by leukocyte [cdef(GO:0002376, [OBO_REL:mediated_by=CL:0000738])] ! Already have xp for: GO:0002444 myeloid leukocyte mediated immunity ! CURRENT : immune system process that OBO_REL:mediated_by myeloid leukocyte [cdef(GO:0002376, [OBO_REL:mediated_by=CL:0000766])] ! Already have xp for: GO:0002446 neutrophil mediated immunity ! CURRENT : immune system process that OBO_REL:mediated_by neutrophil [cdef(GO:0002376, [OBO_REL:mediated_by=CL:0000775])] ! Already have xp for: GO:0002449 lymphocyte mediated immunity ! CURRENT : immune system process that OBO_REL:mediated_by lymphocyte [cdef(GO:0002376, [OBO_REL:mediated_by=CL:0000542])] ! Already have xp for: GO:0002450 B cell antigen processing and presentation ! CURRENT : antigen processing and presentation that OBO_REL:mediated_by B cell [cdef(GO:0019882, [OBO_REL:mediated_by=CL:0000236])] ! No parse for: GO:0002452 B cell receptor editing ! Already have xp for: GO:0002456 T cell mediated immunity ! CURRENT : immune system process that OBO_REL:mediated_by T cell [cdef(GO:0002376, [OBO_REL:mediated_by=CL:0000084])] ! Already have xp for: GO:0002457 T cell antigen processing and presentation ! CURRENT : antigen processing and presentation that OBO_REL:mediated_by T cell [cdef(GO:0019882, [OBO_REL:mediated_by=CL:0000084])] ! No parse for: GO:0002463 central tolerance induction to nonself antigen ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0002467 using "germinal center formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(germinal center, anatomy)]) [-16] ! no existing xp def ! def: "The process by which germinal centers form. A germinal center is a specialized microenvironment formed when activated B cells enter lymphoid follicles. Germinal centers are the foci for B cell proliferation and somatic hypermutation." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of anon(germinal center, anatomy) [cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(germinal center, anatomy)])] [Term] id: GO:0002467 ! germinal center formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of anatomy:germinal_center synonym: "germinal center anatomical structure formation" EXACT [OBOL:automatic] synonym: "germinal center formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0002467: 4.17 ! Already have xp for: GO:0002468 dendritic cell antigen processing and presentation ! CURRENT : antigen processing and presentation that OBO_REL:mediated_by dendritic cell [cdef(GO:0019882, [OBO_REL:mediated_by=CL:0000451])] ! Already have xp for: GO:0002470 plasmacytoid dendritic cell antigen processing and presentation ! CURRENT : antigen processing and presentation that OBO_REL:mediated_by plasmacytoid dendritic cell [cdef(GO:0019882, [OBO_REL:mediated_by=CL:0000784])] ! Already have xp for: GO:0002471 monocyte antigen processing and presentation ! CURRENT : antigen processing and presentation that OBO_REL:mediated_by monocyte [cdef(GO:0019882, [OBO_REL:mediated_by=CL:0000576])] ! Already have xp for: GO:0002472 macrophage antigen processing and presentation ! CURRENT : antigen processing and presentation that OBO_REL:mediated_by macrophage [cdef(GO:0019882, [OBO_REL:mediated_by=CL:0000235])] ! No parse for: GO:0002498 proteolysis within endoplasmic reticulum associated with antigen processing and presentation ! No parse for: GO:0002499 proteolysis within endosome associated with antigen processing and presentation ! No parse for: GO:0002500 proteolysis within lysosome associated with antigen processing and presentation ! No parse for: GO:0002508 central tolerance induction ! No parse for: GO:0002509 central tolerance induction to self antigen ! No parse for: GO:0002510 central B cell tolerance induction ! No parse for: GO:0002511 central B cell receptor editing ! No parse for: GO:0002512 central T cell tolerance induction ! Already have xp for: GO:0002514 B cell tolerance induction ! CURRENT : tolerance induction that OBO_REL:mediated_by B cell [cdef(GO:0002507, [OBO_REL:mediated_by=CL:0000236])] ! Already have xp for: GO:0002515 B cell anergy ! CURRENT : immune system process that OBO_REL:inactivates B cell [cdef(GO:0002376, [OBO_REL:inactivates=CL:0000236])] ! Already have xp for: GO:0002516 B cell deletion ! CURRENT : apoptosis that OBO_REL:part_of immune system process and OBO_REL:results_in_death_of B cell [cdef(GO:0006915, [OBO_REL:part_of=GO:0002376, OBO_REL:results_in_death_of=CL:0000236])] ! Already have xp for: GO:0002517 T cell tolerance induction ! CURRENT : tolerance induction that OBO_REL:mediated_by T cell [cdef(GO:0002507, [OBO_REL:mediated_by=CL:0000084])] ! No parse for: GO:0002518 lymphocyte chemotaxis across high endothelial venule ! Already have xp for: GO:0002519 natural killer cell tolerance induction ! CURRENT : tolerance induction that OBO_REL:mediated_by natural killer cell [cdef(GO:0002507, [OBO_REL:mediated_by=CL:0000623])] ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0002520 using "immune system development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0002711]) [-2] ! parse: GO:0002520 using "immune system development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0001159]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of an organismal system whose objective is to provide calibrated responses by an organism to a potential internal or invasive threat, over time, from its formation to the mature structure. A system is a regularly interacting or interdependent group of organs or tissues that work together to carry out a given biological process." ! PROPOSED: developmental process that results_in_complete_developmental_of immune system [cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0001159])] [Term] id: GO:0002520 ! immune system development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of ZFA:0001159 ! immune system ! seconds spent parsing GO:0002520: 5.31 ! Already have xp for: GO:0002521 leukocyte differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of leukocyte [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000738])] ! Already have xp for: GO:0002522 leukocyte migration during immune response ! CURRENT : leukocyte migration that OBO_REL:part_of immune response [cdef(GO:0050900, [OBO_REL:part_of=GO:0006955])] ! Already have xp for: GO:0002523 leukocyte migration during inflammatory response ! CURRENT : leukocyte migration that OBO_REL:part_of inflammatory response [cdef(GO:0050900, [OBO_REL:part_of=GO:0006954])] ! Already have xp for: GO:0002535 platelet activating factor secretion during acute inflammatory response ! CURRENT : platelet activating factor secretion that OBO_REL:part_of acute inflammatory response [cdef(GO:0002392, [OBO_REL:part_of=GO:0002526])] ! Already have xp for: GO:0002548 monocyte chemotaxis ! CURRENT : chemotaxis that OBO_REL:results_in_movement_of monocyte [cdef(GO:0006935, [OBO_REL:results_in_movement_of=CL:0000576])] ! No parse for: GO:0002562 somatic diversification of immune receptors via germline recombination within a single locus ! No parse for: GO:0002563 somatic diversification of immune receptors via alternate splicing ! No parse for: GO:0002565 somatic diversification of immune receptors via gene conversion ! No parse for: GO:0002566 somatic diversification of immune receptors via somatic mutation ! No parse for: GO:0002567 somatic diversification of FREP-based immune receptors ! No parse for: GO:0002568 somatic diversification of T cell receptor genes ! No parse for: GO:0002569 somatic diversification of immune receptors by N region addition ! No parse for: GO:0002570 somatic diversification of immunoglobulin genes by N region addition ! No parse for: GO:0002571 somatic diversification of T cell receptor genes by N region addition ! Already have xp for: GO:0002572 pro-T cell differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of pro-T cell [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000827])] ! Already have xp for: GO:0002573 myeloid leukocyte differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of myeloid leukocyte [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000766])] ! Already have xp for: GO:0002574 thrombocyte differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of thrombocyte [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000762])] ! Already have xp for: GO:0002576 platelet degranulation ! CURRENT : exocytosis that OBO_REL:results_in_transport_of platelet [cdef(GO:0006887, [OBO_REL:results_in_transport_of=CL:0000233])] ! Already have xp for: GO:0002680 pro-T cell lineage commitment ! CURRENT : cell fate commitment that OBO_REL:results_in_commitment_to pro-T cell [cdef(GO:0045165, [OBO_REL:results_in_commitment_to=CL:0000827])] ! No parse for: GO:0002681 somatic recombination of T cell receptor gene segments ! No parse for: GO:0002752 cell surface pattern recognition receptor signaling pathway ! No parse for: GO:0002753 cytoplasmic pattern recognition receptor signaling pathway ! No parse for: GO:0002754 intracellular vesicle pattern recognition receptor signaling pathway ! No parse for: GO:0002769 natural killer cell inhibitory signaling pathway ! No parse for: GO:0002770 T cell inhibitory signaling pathway ! No parse for: GO:0002772 inhibitory C-type lectin receptor signaling pathway ! No parse for: GO:0002773 B cell inhibitory signaling pathway ! No parse for: GO:0002818 intracellular defense response ! Already have xp for: GO:0002870 T cell anergy ! CURRENT : immune system process that OBO_REL:inactivates T cell [cdef(GO:0002376, [OBO_REL:inactivates=CL:0000084])] ! Already have xp for: GO:0002901 mature B cell apoptosis ! CURRENT : apoptosis that OBO_REL:results_in_death_of mature B cell [cdef(GO:0006915, [OBO_REL:results_in_death_of=CL:0000785])] ! parse: GO:0003007 using "cardiac morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(cardiac, anatomy)]) [-8] ! parse: GO:0003007 using "heart morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000072]) [-2] ! parse: GO:0003007 using "heart morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0000114]) [-2] ! no existing xp def ! def: "The developmental process by which the heart is generated and organized. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of heart [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0000114])] [Term] id: GO:0003007 ! heart morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0000114 ! heart ! seconds spent parsing GO:0003007: 10.2 ! No parse for: GO:0006034 cuticle chitin metabolic process ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0006035 using "cuticle chitin anabolism" => cdef(GO:0006031, [OBO_REL:results_in_creation_of=FBbt:00004970]) [-2] ! parse: GO:0006035 using "cuticle chitin anabolism" => cdef(GO:0006031, [OBO_REL:results_in_creation_of=MA:0002704]) [-2] ! parse: GO:0006035 using "cuticle chitin anabolism" => cdef(GO:0006031, [OBO_REL:results_in_creation_of=PO:0000022]) [-2] ! parse: GO:0006035 using "cuticle chitin biosynthesis" => cdef(GO:0006031, [OBO_REL:results_in_creation_of=FBbt:00004970]) [-2] ! parse: GO:0006035 using "cuticle chitin biosynthesis" => cdef(GO:0006031, [OBO_REL:results_in_creation_of=MA:0002704]) [-2] ! parse: GO:0006035 using "cuticle chitin biosynthesis" => cdef(GO:0006031, [OBO_REL:results_in_creation_of=PO:0000022]) [-2] ! parse: GO:0006035 using "cuticle chitin biosynthetic process" => cdef(GO:0006031, [OBO_REL:results_in_creation_of=FBbt:00004970]) [-2] ! parse: GO:0006035 using "cuticle chitin biosynthetic process" => cdef(GO:0006031, [OBO_REL:results_in_creation_of=MA:0002704]) [-2] ! parse: GO:0006035 using "cuticle chitin biosynthetic process" => cdef(GO:0006031, [OBO_REL:results_in_creation_of=PO:0000022]) [-2] ! parse: GO:0006035 using "cuticle chitin formation" => cdef(GO:0006031, [OBO_REL:results_in_creation_of=FBbt:00004970]) [-2] ! parse: GO:0006035 using "cuticle chitin formation" => cdef(GO:0006031, [OBO_REL:results_in_creation_of=MA:0002704]) [-2] ! parse: GO:0006035 using "cuticle chitin formation" => cdef(GO:0006031, [OBO_REL:results_in_creation_of=PO:0000022]) [-2] ! parse: GO:0006035 using "cuticle chitin formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(chitin, anatomy), OBO_REL:unfolds_in=FBbt:00004970]) [-8] ! parse: GO:0006035 using "cuticle chitin formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(chitin, anatomy), OBO_REL:unfolds_in=MA:0002704]) [-8] ! parse: GO:0006035 using "cuticle chitin formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(chitin, anatomy), OBO_REL:unfolds_in=PO:0000022]) [-8] ! parse: GO:0006035 using "cuticle chitin synthesis" => cdef(GO:0006031, [OBO_REL:results_in_creation_of=FBbt:00004970]) [-2] ! parse: GO:0006035 using "cuticle chitin synthesis" => cdef(GO:0006031, [OBO_REL:results_in_creation_of=MA:0002704]) [-2] ! parse: GO:0006035 using "cuticle chitin synthesis" => cdef(GO:0006031, [OBO_REL:results_in_creation_of=PO:0000022]) [-2] ! no existing xp def ! def: "The chemical reactions and pathways resulting in the formation of cuticle chitin, a linear polysaccharide consisting of P-1,4-linked N-acetyl-D-glucosamine residues, found in cuticles." ! PROPOSED: chitin biosynthetic process that OBO_REL:results_in_creation_of cuticle [cdef(GO:0006031, [OBO_REL:results_in_creation_of=PO:0000022])] [Term] id: GO:0006035 ! cuticle chitin biosynthetic process intersection_of: GO:0006031 ! chitin biosynthetic process intersection_of: OBO_REL:results_in_creation_of PO:0000022 ! cuticle ! seconds spent parsing GO:0006035: 56.8 ! No parse for: GO:0006036 cuticle chitin catabolic process ! No parse for: GO:0006037 cell wall chitin metabolic process ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0006038 using "cell wall chitin anabolism" => cdef(GO:0006031, [OBO_REL:results_in_creation_of=GO:0005618]) [-2] ! parse: GO:0006038 using "cell wall chitin biosynthesis" => cdef(GO:0006031, [OBO_REL:results_in_creation_of=GO:0005618]) [-2] ! parse: GO:0006038 using "cell wall chitin biosynthetic process" => cdef(GO:0006031, [OBO_REL:results_in_creation_of=GO:0005618]) [-2] ! parse: GO:0006038 using "cell wall chitin formation" => cdef(GO:0006031, [OBO_REL:results_in_creation_of=GO:0005618]) [-2] ! parse: GO:0006038 using "cell wall chitin formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(chitin, anatomy), OBO_REL:unfolds_in=GO:0005618]) [-8] ! parse: GO:0006038 using "cell wall chitin formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(wall chitin, anatomy), OBO_REL:unfolds_in=CL:0000000]) [-13] ! parse: GO:0006038 using "cell wall chitin formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(wall chitin, anatomy), OBO_REL:unfolds_in=ZFA:0009000]) [-13] ! parse: GO:0006038 using "cell wall chitin synthesis" => cdef(GO:0006031, [OBO_REL:results_in_creation_of=GO:0005618]) [-2] ! no existing xp def ! def: "The chemical reactions and pathways resulting in the formation of cell wall chitin, a linear polysaccharide consisting of P-1,4-linked N-acetyl-D-glucosamine residues, found in the walls of cells." ! PROPOSED: chitin biosynthetic process that OBO_REL:results_in_creation_of cell wall [cdef(GO:0006031, [OBO_REL:results_in_creation_of=GO:0005618])] [Term] id: GO:0006038 ! cell wall chitin biosynthetic process intersection_of: GO:0006031 ! chitin biosynthetic process intersection_of: OBO_REL:results_in_creation_of GO:0005618 ! cell wall def: "The aggregation and bonding together of a set of macromolecules to form a cell wall" [OBOL:automatic] ! seconds spent parsing GO:0006038: 63.67 ! No parse for: GO:0006039 cell wall chitin catabolic process ! No parse for: GO:0006082 organic acid metabolic process ! No parse for: GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c ! No parse for: GO:0006125 thioredoxin pathway ! No parse for: GO:0006264 mitochondrial DNA replication ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0006267 using "pre-replicative complex assembly" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0005656]) [-2] ! parse: GO:0006267 using "pre-replicative complex formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=GO:0005656]) [-2] ! parse: GO:0006267 using "pre-replicative complex formation" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0005656]) [-2] ! parse: GO:0006267 using "pre-replicative complex formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0005656]) [-2] ! no existing xp def ! def: "The aggregation and bonding together of a set of components to form the pre-replicative complex, multiprotein complex that forms at eukaryotic DNA replication origins during late M phase; its presence is required for replication initiation." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of pre-replicative complex [cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0005656])] [Term] id: GO:0006267 ! pre-replicative complex assembly intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of GO:0005656 ! pre-replicative complex synonym: "pre-RC anatomical structure formation" EXACT [OBOL:automatic] synonym: "pre-RC formation" EXACT [OBOL:automatic] synonym: "pre-RC formation of an anatomical structure" EXACT [OBOL:automatic] synonym: "pre-replicative complex anatomical structure formation" EXACT [OBOL:automatic] synonym: "pre-replicative complex formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0006267: 11.69 ! No parse for: GO:0006333 chromatin assembly or disassembly ! parse: GO:0006334 using "nucleosome assembly" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0000786]) [-2] ! no existing xp def ! def: "The aggregation and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA." ! PROPOSED: cellular component assembly that OBO_REL:results_in_creation_of nucleosome [cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0000786])] [Term] id: GO:0006334 ! nucleosome assembly intersection_of: GO:0022607 ! cellular component assembly intersection_of: OBO_REL:results_in_creation_of GO:0000786 ! nucleosome synonym: "assembly and maintenance of nucleosome" EXACT [OBOL:automatic] synonym: "assembly of nucleosome" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of nucleosome" EXACT [OBOL:automatic] synonym: "biogenesis of nucleosome" EXACT [OBOL:automatic] synonym: "cell structure assembly of nucleosome" EXACT [OBOL:automatic] synonym: "cellular component assembly of nucleosome" EXACT [OBOL:automatic] synonym: "complex assembly of nucleosome" EXACT [OBOL:automatic] synonym: "formation of nucleosome" EXACT [OBOL:automatic] synonym: "nucleosome assembly and maintenance" EXACT [OBOL:automatic] synonym: "nucleosome biogenesis" EXACT [OBOL:automatic] synonym: "nucleosome biogenesis and assembly" EXACT [OBOL:automatic] synonym: "nucleosome cell structure assembly" EXACT [OBOL:automatic] synonym: "nucleosome cellular component assembly" EXACT [OBOL:automatic] synonym: "nucleosome complex assembly" EXACT [OBOL:automatic] synonym: "nucleosome formation" EXACT [OBOL:automatic] def: "The aggregation and bonding together of a set of macromolecules to form a nucleosome" [OBOL:automatic] ! seconds spent parsing GO:0006334: 14.67 ! parse: GO:0006337 using "nucleosome disassembly" => cdef(GO:0022411, [OBO_REL:results_in_breakdown_of=GO:0000786]) [-2] ! no existing xp def ! def: "The disassembly of nucleosomes, the beadlike structural units of eukaryotic chromatin composed of histones and DNA." ! PROPOSED: cellular component disassembly that OBO_REL:results_in_breakdown_of nucleosome [cdef(GO:0022411, [OBO_REL:results_in_breakdown_of=GO:0000786])] [Term] id: GO:0006337 ! nucleosome disassembly intersection_of: GO:0022411 ! cellular component disassembly intersection_of: OBO_REL:results_in_breakdown_of GO:0000786 ! nucleosome synonym: "cell structure disassembly of nucleosome" EXACT [OBOL:automatic] synonym: "cellular component disassembly of nucleosome" EXACT [OBOL:automatic] synonym: "disassembly of nucleosome" EXACT [OBOL:automatic] synonym: "nucleosome cell structure disassembly" EXACT [OBOL:automatic] synonym: "nucleosome cellular component disassembly" EXACT [OBOL:automatic] ! seconds spent parsing GO:0006337: 5.49 ! No parse for: GO:0006338 chromatin remodeling ! Already have xp for: GO:0006342 chromatin silencing ! CURRENT : gene silencing that OBO_REL:part_of transcription [cdef(GO:0016458, [OBO_REL:part_of=GO:0006350])] ! No parse for: GO:0006348 chromatin silencing at telomere ! No parse for: GO:0006352 transcription initiation ! No parse for: GO:0006376 mRNA splice site selection ! No parse for: GO:0006388 tRNA splicing ! No parse for: GO:0006399 tRNA metabolic process ! No parse for: GO:0006400 tRNA modification ! No parse for: GO:0006409 tRNA export from nucleus ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0006412 using "protein formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(protein, anatomy)]) [-8] ! no existing xp def ! def: "The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of anon(protein, anatomy) [cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(protein, anatomy)])] [Term] id: GO:0006412 ! translation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of anatomy:protein synonym: "protein anatomical structure formation" EXACT [OBOL:automatic] synonym: "protein formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0006412: 56.22 ! No parse for: GO:0006413 translational initiation ! No parse for: GO:0006414 translational elongation ! No parse for: GO:0006415 translational termination ! No parse for: GO:0006418 tRNA aminoacylation for protein translation ! No parse for: GO:0006457 protein folding ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0006461 using "protein complex assembly" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0043234]) [-2] ! parse: GO:0006461 using "protein complex biosynthesis" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=GO:0043234]) [-2] ! parse: GO:0006461 using "protein complex formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=GO:0043234]) [-2] ! parse: GO:0006461 using "protein complex formation" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0043234]) [-2] ! parse: GO:0006461 using "protein complex formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0043234]) [-2] ! no existing xp def ! def: "The aggregation and bonding together of a set of components to form a protein complex." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of protein complex [cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0043234])] [Term] id: GO:0006461 ! protein complex assembly intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of GO:0043234 ! protein complex synonym: "protein complex anatomical structure formation" EXACT [OBOL:automatic] synonym: "protein complex formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0006461: 22.79 ! No parse for: GO:0006464 protein modification process ! No parse for: GO:0006509 membrane protein ectodomain proteolysis ! parse: GO:0006511 using "ubiquitin-dependent protein breakdown" => cdef(GO:0030163, [OBO_REL:dependent_on=GO:0016567]) [-2] ! parse: GO:0006511 using "ubiquitin-dependent protein breakdown" => cdef(GO:0030163, [OBO_REL:dependent_on=GO:0031386]) [-2] ! parse: GO:0006511 using "ubiquitin-dependent protein catabolic process" => cdef(GO:0030163, [OBO_REL:dependent_on=GO:0016567]) [-2] ! parse: GO:0006511 using "ubiquitin-dependent protein catabolic process" => cdef(GO:0030163, [OBO_REL:dependent_on=GO:0031386]) [-2] ! parse: GO:0006511 using "ubiquitin-dependent protein catabolism" => cdef(GO:0030163, [OBO_REL:dependent_on=GO:0016567]) [-2] ! parse: GO:0006511 using "ubiquitin-dependent protein catabolism" => cdef(GO:0030163, [OBO_REL:dependent_on=GO:0031386]) [-2] ! parse: GO:0006511 using "ubiquitin-dependent protein degradation" => cdef(GO:0030163, [OBO_REL:dependent_on=GO:0016567]) [-2] ! parse: GO:0006511 using "ubiquitin-dependent protein degradation" => cdef(GO:0030163, [OBO_REL:dependent_on=GO:0031386]) [-2] ! parse: GO:0006511 using "ubiquitin-dependent proteolysis" => cdef(GO:0006508, [OBO_REL:dependent_on=GO:0016567]) [-2] ! parse: GO:0006511 using "ubiquitin-dependent proteolysis" => cdef(GO:0006508, [OBO_REL:dependent_on=GO:0031386]) [-2] ! no existing xp def ! def: "The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein." ! PROPOSED: protein catabolic process that OBO_REL:dependent_on protein tag [cdef(GO:0030163, [OBO_REL:dependent_on=GO:0031386])] [Term] id: GO:0006511 ! ubiquitin-dependent protein catabolic process intersection_of: GO:0030163 ! protein catabolic process intersection_of: OBO_REL:dependent_on GO:0031386 ! protein tag synonym: "protein tag-dependent protein breakdown" EXACT [OBOL:automatic] synonym: "protein tag-dependent protein catabolic process" EXACT [OBOL:automatic] synonym: "protein tag-dependent protein catabolism" EXACT [OBOL:automatic] synonym: "protein tag-dependent protein degradation" EXACT [OBOL:automatic] synonym: "protein tagging activity-dependent protein breakdown" EXACT [OBOL:automatic] synonym: "protein tagging activity-dependent protein catabolic process" EXACT [OBOL:automatic] synonym: "protein tagging activity-dependent protein catabolism" EXACT [OBOL:automatic] synonym: "protein tagging activity-dependent protein degradation" EXACT [OBOL:automatic] ! seconds spent parsing GO:0006511: 44.97 ! No parse for: GO:0006512 ubiquitin cycle ! Already have xp for: GO:0006597 spermine biosynthetic process ! CURRENT : biosynthetic process that OBO_REL:results_in_creation_of spermine [cdef(GO:0009058, [OBO_REL:results_in_creation_of=cell:spermine])] ! parse: GO:0006608 using "snRNP protein import into nucleus" => cdef(GO:0006606, [OBO_REL:results_in_transport_of=GO:0030532]) [-2] ! parse: GO:0006608 using "snRNP protein transport from cytoplasm to nucleus" => cdef(GO:0006606, [OBO_REL:results_in_transport_of=GO:0030532]) [-2] ! no existing xp def ! def: "The directed movement of a small nuclear ribonucleoprotein from the cytoplasm into the nucleus, across the nuclear membrane." ! PROPOSED: protein import into nucleus that OBO_REL:results_in_transport_of small nuclear ribonucleoprotein complex [cdef(GO:0006606, [OBO_REL:results_in_transport_of=GO:0030532])] [Term] id: GO:0006608 ! snRNP protein import into nucleus intersection_of: GO:0006606 ! protein import into nucleus intersection_of: OBO_REL:results_in_transport_of GO:0030532 ! small nuclear ribonucleoprotein complex synonym: "small nuclear ribonucleoprotein RAN small monomeric GTPase activity" EXACT [OBOL:automatic] synonym: "small nuclear ribonucleoprotein protein import into nucleus" EXACT [OBOL:automatic] synonym: "small nuclear ribonucleoprotein protein nucleus import" EXACT [OBOL:automatic] synonym: "small nuclear ribonucleoprotein protein transport from cytoplasm to nucleus" EXACT [OBOL:automatic] ! seconds spent parsing GO:0006608: 32.41 ! No parse for: GO:0006609 mRNA-binding (hnRNP) protein import into nucleus ! No parse for: GO:0006610 ribosomal protein import into nucleus ! No parse for: GO:0006624 vacuolar protein processing ! No parse for: GO:0006643 membrane lipid metabolic process ! Already have xp for: GO:0006663 platelet activating factor biosynthetic process ! CURRENT : biosynthetic process that OBO_REL:results_in_creation_of PAF [cdef(GO:0009058, [OBO_REL:results_in_creation_of=cell:PAF])] ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0006699 using "bile acid formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(acid, anatomy), OBO_REL:unfolds_in=MA:0002513]) [-6] ! no existing xp def ! def: "The chemical reactions and pathways resulting in the formation of bile acids, any of a group of steroid carboxylic acids occurring in bile." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of anon(acid, anatomy) and OBO_REL:unfolds_in bile [cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(acid, anatomy), OBO_REL:unfolds_in=MA:0002513])] [Term] id: GO:0006699 ! bile acid biosynthetic process intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of anatomy:acid intersection_of: OBO_REL:unfolds_in MA:0002513 ! bile ! seconds spent parsing GO:0006699: 42.52 ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0006723 using "cuticle hydrocarbon formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(hydrocarbon, anatomy), OBO_REL:unfolds_in=FBbt:00004970]) [-13] ! parse: GO:0006723 using "cuticle hydrocarbon formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(hydrocarbon, anatomy), OBO_REL:unfolds_in=MA:0002704]) [-13] ! parse: GO:0006723 using "cuticle hydrocarbon formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(hydrocarbon, anatomy), OBO_REL:unfolds_in=PO:0000022]) [-13] ! no existing xp def ! def: "The chemical reactions and pathways resulting in the formation of hydrocarbons that make up the cuticle, the outer layer of some animals and plants, which acts to prevent water loss." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of anon(hydrocarbon, anatomy) and OBO_REL:unfolds_in cuticle [cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(hydrocarbon, anatomy), OBO_REL:unfolds_in=PO:0000022])] [Term] id: GO:0006723 ! cuticle hydrocarbon biosynthetic process intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of anatomy:hydrocarbon intersection_of: OBO_REL:unfolds_in PO:0000022 ! cuticle ! seconds spent parsing GO:0006723: 48.68 ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0006726 using "eye pigment anabolism" => cdef(GO:0046148, [OBO_REL:results_in_creation_of=FBbt:00004508]) [-2] ! parse: GO:0006726 using "eye pigment anabolism" => cdef(GO:0046148, [OBO_REL:results_in_creation_of=MA:0000261]) [-2] ! parse: GO:0006726 using "eye pigment anabolism" => cdef(GO:0046148, [OBO_REL:results_in_creation_of=ZFA:0000107]) [-2] ! parse: GO:0006726 using "eye pigment biosynthesis" => cdef(GO:0046148, [OBO_REL:results_in_creation_of=FBbt:00004508]) [-2] ! parse: GO:0006726 using "eye pigment biosynthesis" => cdef(GO:0046148, [OBO_REL:results_in_creation_of=MA:0000261]) [-2] ! parse: GO:0006726 using "eye pigment biosynthesis" => cdef(GO:0046148, [OBO_REL:results_in_creation_of=ZFA:0000107]) [-2] ! parse: GO:0006726 using "eye pigment biosynthetic process" => cdef(GO:0046148, [OBO_REL:results_in_creation_of=FBbt:00004508]) [-2] ! parse: GO:0006726 using "eye pigment biosynthetic process" => cdef(GO:0046148, [OBO_REL:results_in_creation_of=MA:0000261]) [-2] ! parse: GO:0006726 using "eye pigment biosynthetic process" => cdef(GO:0046148, [OBO_REL:results_in_creation_of=ZFA:0000107]) [-2] ! parse: GO:0006726 using "eye pigment formation" => cdef(GO:0046148, [OBO_REL:results_in_creation_of=FBbt:00004508]) [-2] ! parse: GO:0006726 using "eye pigment formation" => cdef(GO:0046148, [OBO_REL:results_in_creation_of=MA:0000261]) [-2] ! parse: GO:0006726 using "eye pigment formation" => cdef(GO:0046148, [OBO_REL:results_in_creation_of=ZFA:0000107]) [-2] ! parse: GO:0006726 using "eye pigment formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(pigment, anatomy), OBO_REL:unfolds_in=FBbt:00004508]) [-9] ! parse: GO:0006726 using "eye pigment formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(pigment, anatomy), OBO_REL:unfolds_in=MA:0000261]) [-9] ! parse: GO:0006726 using "eye pigment formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(pigment, anatomy), OBO_REL:unfolds_in=ZFA:0000107]) [-9] ! parse: GO:0006726 using "eye pigment synthesis" => cdef(GO:0046148, [OBO_REL:results_in_creation_of=FBbt:00004508]) [-2] ! parse: GO:0006726 using "eye pigment synthesis" => cdef(GO:0046148, [OBO_REL:results_in_creation_of=MA:0000261]) [-2] ! parse: GO:0006726 using "eye pigment synthesis" => cdef(GO:0046148, [OBO_REL:results_in_creation_of=ZFA:0000107]) [-2] ! no existing xp def ! def: "The chemical reactions and pathways resulting in the formation of eye pigments, any general or particular coloring matter in living organisms, found or utilized in the eye." ! PROPOSED: pigment biosynthetic process that OBO_REL:results_in_creation_of eye [cdef(GO:0046148, [OBO_REL:results_in_creation_of=ZFA:0000107])] [Term] id: GO:0006726 ! eye pigment biosynthetic process intersection_of: GO:0046148 ! pigment biosynthetic process intersection_of: OBO_REL:results_in_creation_of ZFA:0000107 ! eye ! seconds spent parsing GO:0006726: 56.76 ! No parse for: GO:0006810 transport ! No parse for: GO:0006839 mitochondrial transport ! parse: GO:0006847 using "plasma membrane acetate transport" => cdef(GO:0006846, [OBO_REL:results_in_transport_of=GO:0005886]) [-2] ! parse: GO:0006847 using "plasma membrane acetate transport" => cdef(GO:0006846, [OBO_REL:results_in_transport_of=GO:0016020, OBO_REL:unfolds_in=MA:0002501]) [-3] ! no existing xp def ! def: "The directed movement of acetate across a plasma membrane." ! PROPOSED: acetate transport that OBO_REL:results_in_transport_of plasma membrane [cdef(GO:0006846, [OBO_REL:results_in_transport_of=GO:0005886])] [Term] id: GO:0006847 ! plasma membrane acetate transport intersection_of: GO:0006846 ! acetate transport intersection_of: OBO_REL:results_in_transport_of GO:0005886 ! plasma membrane synonym: "cell membrane acetate transport" EXACT [OBOL:automatic] synonym: "cytoplasmic membrane acetate transport" EXACT [OBOL:automatic] synonym: "plasma membrane cation-transporting ATPase acetate transport" EXACT [OBOL:automatic] synonym: "plasma membrane copper transporter acetate transport" EXACT [OBOL:automatic] synonym: "plasma membrane long-chain fatty acid transporter acetate transport" EXACT [OBOL:automatic] synonym: "plasmalemma acetate transport" EXACT [OBOL:automatic] ! seconds spent parsing GO:0006847: 17.13 ! parse: GO:0006849 using "plasma membrane pyruvate transport" => cdef(GO:0006848, [OBO_REL:results_in_transport_of=GO:0005886]) [-2] ! parse: GO:0006849 using "plasma membrane pyruvate transport" => cdef(GO:0006848, [OBO_REL:results_in_transport_of=GO:0016020, OBO_REL:unfolds_in=MA:0002501]) [-3] ! no existing xp def ! def: "The directed movement of pyruvate, 2-oxopropanoate, across a plasma membrane." ! PROPOSED: pyruvate transport that OBO_REL:results_in_transport_of plasma membrane [cdef(GO:0006848, [OBO_REL:results_in_transport_of=GO:0005886])] [Term] id: GO:0006849 ! plasma membrane pyruvate transport intersection_of: GO:0006848 ! pyruvate transport intersection_of: OBO_REL:results_in_transport_of GO:0005886 ! plasma membrane synonym: "cell membrane pyruvate transport" EXACT [OBOL:automatic] synonym: "cytoplasmic membrane pyruvate transport" EXACT [OBOL:automatic] synonym: "plasma membrane cation-transporting ATPase pyruvate transport" EXACT [OBOL:automatic] synonym: "plasma membrane copper transporter pyruvate transport" EXACT [OBOL:automatic] synonym: "plasma membrane long-chain fatty acid transporter pyruvate transport" EXACT [OBOL:automatic] synonym: "plasmalemma pyruvate transport" EXACT [OBOL:automatic] ! seconds spent parsing GO:0006849: 17.1 ! No parse for: GO:0006856 eye pigment precursor transport ! parse: GO:0006858 using "extracellular transport" => cdef(GO:0006810, [OBO_REL:results_in_transport_of=GO:0005576]) [-2] ! no existing xp def ! def: "The transport of substances that occurs outside cells." ! PROPOSED: transport that OBO_REL:results_in_transport_of extracellular region [cdef(GO:0006810, [OBO_REL:results_in_transport_of=GO:0005576])] [Term] id: GO:0006858 ! extracellular transport intersection_of: GO:0006810 ! transport intersection_of: OBO_REL:results_in_transport_of GO:0005576 ! extracellular region synonym: "extracellular region hydrolase activity, acting on acid anhydrides, acting on GTP, involved in cellular and subcellular movement" EXACT [OBOL:automatic] synonym: "extracellular region transport" EXACT [OBOL:automatic] ! seconds spent parsing GO:0006858: 6.02 ! parse: GO:0006859 using "extracellular carbohydrate transport" => cdef(GO:0008643, [OBO_REL:results_in_transport_of=GO:0005576]) [-2] ! no existing xp def ! def: "The directed extracellular movement of carbohydrates." ! PROPOSED: carbohydrate transport that OBO_REL:results_in_transport_of extracellular region [cdef(GO:0008643, [OBO_REL:results_in_transport_of=GO:0005576])] [Term] id: GO:0006859 ! extracellular carbohydrate transport intersection_of: GO:0008643 ! carbohydrate transport intersection_of: OBO_REL:results_in_transport_of GO:0005576 ! extracellular region synonym: "extracellular region carbohydrate transport" EXACT [OBOL:automatic] ! seconds spent parsing GO:0006859: 10.17 ! parse: GO:0006860 using "extracellular amino acid transport" => cdef(GO:0006865, [OBO_REL:results_in_transport_of=GO:0005576]) [-2] ! no existing xp def ! def: "The directed extracellular movement of amino acids." ! PROPOSED: amino acid transport that OBO_REL:results_in_transport_of extracellular region [cdef(GO:0006865, [OBO_REL:results_in_transport_of=GO:0005576])] [Term] id: GO:0006860 ! extracellular amino acid transport intersection_of: GO:0006865 ! amino acid transport intersection_of: OBO_REL:results_in_transport_of GO:0005576 ! extracellular region synonym: "extracellular region amino acid transport" EXACT [OBOL:automatic] ! seconds spent parsing GO:0006860: 10.21 ! No parse for: GO:0006873 cell ion homeostasis ! No parse for: GO:0006880 intracellular sequestering of iron ion ! No parse for: GO:0006881 extracellular sequestering of iron ion ! parse: GO:0006886 using "intracellular protein transport" => cdef(GO:0015031, [OBO_REL:results_in_transport_of=GO:0005622]) [-2] ! no existing xp def ! def: "The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell." ! PROPOSED: protein transport that OBO_REL:results_in_transport_of intracellular [cdef(GO:0015031, [OBO_REL:results_in_transport_of=GO:0005622])] [Term] id: GO:0006886 ! intracellular protein transport intersection_of: GO:0015031 ! protein transport intersection_of: OBO_REL:results_in_transport_of GO:0005622 ! intracellular synonym: "protoplasm protein transport" EXACT [OBOL:automatic] ! seconds spent parsing GO:0006886: 11.02 ! No parse for: GO:0006887 exocytosis ! parse: GO:0006888 using "ER to Golgi transport" => cdef(GO:0006810, [OBO_REL:results_in_transport_from=GO:0005783, OBO_REL:results_in_transport_to=GO:0005794]) [-3] ! parse: GO:0006888 using "ER to Golgi transport" => cdef(GO:0006810, [and=results_in_transport_of(GO:0005794)/unfolds_in(FBbt:00002690), OBO_REL:unfolds_in=GO:0005783]) [-3] ! parse: GO:0006888 using "ER to Golgi vesicle-mediated transport" => cdef(GO:0016192, [OBO_REL:results_in_transport_from=GO:0005783, OBO_REL:results_in_transport_to=GO:0005794]) [-3] ! parse: GO:0006888 using "ER to Golgi vesicle-mediated transport" => cdef(GO:0016192, [and=results_in_transport_of(GO:0005794)/unfolds_in(FBbt:00002690), OBO_REL:unfolds_in=GO:0005783]) [-3] ! parse: GO:0006888 using "endoplasmic reticulum to Golgi transport" => cdef(GO:0006810, [OBO_REL:results_in_transport_from=GO:0005783, OBO_REL:results_in_transport_to=GO:0005794]) [-3] ! parse: GO:0006888 using "endoplasmic reticulum to Golgi transport" => cdef(GO:0006810, [and=results_in_transport_of(GO:0005794)/unfolds_in(FBbt:00002690), OBO_REL:unfolds_in=GO:0005783]) [-3] ! parse: GO:0006888 using "endoplasmic reticulum to Golgi vesicle-mediated transport" => cdef(GO:0016192, [OBO_REL:results_in_transport_from=GO:0005783, OBO_REL:results_in_transport_to=GO:0005794]) [-3] ! parse: GO:0006888 using "endoplasmic reticulum to Golgi vesicle-mediated transport" => cdef(GO:0016192, [and=results_in_transport_of(GO:0005794)/unfolds_in(FBbt:00002690), OBO_REL:unfolds_in=GO:0005783]) [-3] ! no existing xp def ! def: "The directed movement of substances from the endoplasmic reticulum (ER) to the Golgi, mediated by COP II vesicles. Small COP II coated vesicles form from the ER and then fuse directly with the cis-Golgi. Larger structures are transported along microtubules to the cis-Golgi." ! PROPOSED: vesicle-mediated transport that and results_in_transport_of(GO:0005794)/unfolds_in(FBbt:00002690) and OBO_REL:unfolds_in endoplasmic reticulum [cdef(GO:0016192, [and=results_in_transport_of(GO:0005794)/unfolds_in(FBbt:00002690), OBO_REL:unfolds_in=GO:0005783])] [Term] id: GO:0006888 ! ER to Golgi vesicle-mediated transport intersection_of: GO:0016192 ! vesicle-mediated transport intersection_of: and results_in_transport_of(GO:0005794)/unfolds_in(FBbt:00002690) intersection_of: OBO_REL:unfolds_in GO:0005783 ! endoplasmic reticulum ! seconds spent parsing GO:0006888: 60.51 ! parse: GO:0006893 using "Golgi to plasma membrane transport" => cdef(GO:0006810, [OBO_REL:results_in_transport_from=GO:0005794, OBO_REL:results_in_transport_to=GO:0005886]) [-3] ! parse: GO:0006893 using "Golgi to plasma membrane transport" => cdef(GO:0006810, [and=results_in_transport_of(GO:0005886)/unfolds_in(FBbt:00002690), OBO_REL:unfolds_in=GO:0005794]) [-3] ! parse: GO:0006893 using "Golgi to plasma membrane transport" => cdef(GO:0006810, [and=results_in_transport_of(GO:0016020)/unfolds_in(that(MA:0002501, part_of(FBbt:00002690))), OBO_REL:unfolds_in=GO:0005794]) [-3] ! parse: GO:0006893 using "Golgi to plasma membrane transport" => cdef(GO:0006810, [and=and(results_in_transport_of(GO:0016020), unfolds_in(MA:0002501))/unfolds_in(FBbt:00002690), OBO_REL:unfolds_in=GO:0005794]) [-3] ! parse: GO:0006893 using "Golgi to plasma membrane vesicle-mediated transport" => cdef(GO:0016192, [OBO_REL:results_in_transport_from=GO:0005794, OBO_REL:results_in_transport_to=GO:0005886]) [-3] ! parse: GO:0006893 using "Golgi to plasma membrane vesicle-mediated transport" => cdef(GO:0016192, [and=results_in_transport_of(GO:0005886)/unfolds_in(FBbt:00002690), OBO_REL:unfolds_in=GO:0005794]) [-3] ! parse: GO:0006893 using "Golgi to plasma membrane vesicle-mediated transport" => cdef(GO:0016192, [and=results_in_transport_of(GO:0016020)/unfolds_in(that(MA:0002501, part_of(FBbt:00002690))), OBO_REL:unfolds_in=GO:0005794]) [-3] ! parse: GO:0006893 using "Golgi to plasma membrane vesicle-mediated transport" => cdef(GO:0016192, [and=and(results_in_transport_of(GO:0016020), unfolds_in(MA:0002501))/unfolds_in(FBbt:00002690), OBO_REL:unfolds_in=GO:0005794]) [-3] ! no existing xp def ! def: "The directed movement of substances from the Golgi to the plasma membrane in transport vesicles that move from the trans-Golgi network to the plasma membrane, where they fuse and release their contents by exocytosis." ! PROPOSED: vesicle-mediated transport that and and(results_in_transport_of(GO:0016020), unfolds_in(MA:0002501))/unfolds_in(FBbt:00002690) and OBO_REL:unfolds_in Golgi apparatus [cdef(GO:0016192, [and=and(results_in_transport_of(GO:0016020), unfolds_in(MA:0002501))/unfolds_in(FBbt:00002690), OBO_REL:unfolds_in=GO:0005794])] [Term] id: GO:0006893 ! Golgi to plasma membrane transport intersection_of: GO:0016192 ! vesicle-mediated transport intersection_of: and and(results_in_transport_of(GO:0016020), unfolds_in(MA:0002501))/unfolds_in(FBbt:00002690) intersection_of: OBO_REL:unfolds_in GO:0005794 ! Golgi apparatus ! seconds spent parsing GO:0006893: 55.2 ! parse: GO:0006894 using "Golgi to secretory vesicle transport" => cdef(GO:0016192, [and=part_of(GO:0046903)/unfolds_in(FBbt:00002690), OBO_REL:unfolds_in=GO:0005794]) [-3] ! parse: GO:0006894 using "Golgi to secretory vesicle transport" => cdef(cdef(GO:0006810, [OBO_REL:results_in_transport_of=GO:0031982]), [and=part_of(GO:0046903)/unfolds_in(FBbt:00002690), OBO_REL:unfolds_in=GO:0005794]) [-4] ! no existing xp def ! def: "The directed movement of proteins from the Golgi to one of two types of secretory vesicle. Continuously secreted proteins are sorted into transport vesicles that fuse with the plasma membrane, releasing their contents by exocytosis. Specialized secretory cells have a second secretory pathway in which soluble proteins and other substances are initially stored in secretory vesicles for later release." ! PROPOSED: vesicle-mediated transport that and part_of(GO:0046903)/unfolds_in(FBbt:00002690) and OBO_REL:unfolds_in Golgi apparatus [cdef(GO:0016192, [and=part_of(GO:0046903)/unfolds_in(FBbt:00002690), OBO_REL:unfolds_in=GO:0005794])] [Term] id: GO:0006894 ! Golgi to secretory vesicle transport intersection_of: GO:0016192 ! vesicle-mediated transport intersection_of: and part_of(GO:0046903)/unfolds_in(FBbt:00002690) intersection_of: OBO_REL:unfolds_in GO:0005794 ! Golgi apparatus ! seconds spent parsing GO:0006894: 55.62 ! parse: GO:0006895 using "Golgi to endosome transport" => cdef(GO:0006810, [OBO_REL:results_in_transport_from=GO:0005794, OBO_REL:results_in_transport_to=GO:0005768]) [-3] ! parse: GO:0006895 using "Golgi to endosome transport" => cdef(GO:0006810, [and=results_in_transport_of(GO:0005768)/unfolds_in(FBbt:00002690), OBO_REL:unfolds_in=GO:0005794]) [-3] ! parse: GO:0006895 using "Golgi to endosome transport" => cdef(GO:0016197, [OBO_REL:results_in_transport_of=FBbt:00002690, OBO_REL:unfolds_in=GO:0005794]) [-3] ! parse: GO:0006895 using "Golgi to endosome vesicle-mediated transport" => cdef(GO:0016192, [OBO_REL:results_in_transport_from=GO:0005794, OBO_REL:results_in_transport_to=GO:0005768]) [-3] ! parse: GO:0006895 using "Golgi to endosome vesicle-mediated transport" => cdef(GO:0016192, [and=results_in_transport_of(GO:0005768)/unfolds_in(FBbt:00002690), OBO_REL:unfolds_in=GO:0005794]) [-3] ! parse: GO:0006895 using "TGN to endosome transport" => cdef(GO:0006810, [OBO_REL:results_in_transport_from=GO:0005802, OBO_REL:results_in_transport_to=GO:0005768]) [-3] ! parse: GO:0006895 using "TGN to endosome transport" => cdef(GO:0006810, [and=results_in_transport_of(GO:0005768)/unfolds_in(FBbt:00002690), OBO_REL:unfolds_in=GO:0005802]) [-3] ! parse: GO:0006895 using "TGN to endosome transport" => cdef(GO:0016197, [OBO_REL:results_in_transport_of=FBbt:00002690, OBO_REL:unfolds_in=GO:0005802]) [-3] ! no existing xp def ! def: "The directed movement of substances from the Golgi to early sorting endosomes. Clathrin vesicles transport substances from the trans-Golgi to endosomes." ! PROPOSED: endosome transport that OBO_REL:results_in_transport_of larval maxillary sense organ and OBO_REL:unfolds_in trans-Golgi network [cdef(GO:0016197, [OBO_REL:results_in_transport_of=FBbt:00002690, OBO_REL:unfolds_in=GO:0005802])] [Term] id: GO:0006895 ! Golgi to endosome transport intersection_of: GO:0016197 ! endosome transport intersection_of: OBO_REL:results_in_transport_of FBbt:00002690 ! larval maxillary sense organ intersection_of: OBO_REL:unfolds_in GO:0005802 ! trans-Golgi network synonym: "Golgi trans face Maxillarorgan endosome transport" EXACT [OBOL:automatic] synonym: "Golgi trans face larval maxillary sense organ endosome transport" EXACT [OBOL:automatic] synonym: "Golgi trans face maxillary element endosome transport" EXACT [OBOL:automatic] synonym: "Golgi trans face terminal organ endosome transport" EXACT [OBOL:automatic] synonym: "Golgi trans-face Maxillarorgan endosome transport" EXACT [OBOL:automatic] synonym: "Golgi trans-face larval maxillary sense organ endosome transport" EXACT [OBOL:automatic] synonym: "Golgi trans-face maxillary element endosome transport" EXACT [OBOL:automatic] synonym: "Golgi trans-face terminal organ endosome transport" EXACT [OBOL:automatic] synonym: "Golgi trans-face to endosome transport" EXACT [OBOL:automatic] synonym: "TGN Maxillarorgan endosome transport" EXACT [OBOL:automatic] synonym: "TGN larval maxillary sense organ endosome transport" EXACT [OBOL:automatic] synonym: "TGN maxillary element endosome transport" EXACT [OBOL:automatic] synonym: "TGN terminal organ endosome transport" EXACT [OBOL:automatic] synonym: "maturing face Maxillarorgan endosome transport" EXACT [OBOL:automatic] synonym: "maturing face larval maxillary sense organ endosome transport" EXACT [OBOL:automatic] synonym: "maturing face maxillary element endosome transport" EXACT [OBOL:automatic] synonym: "maturing face terminal organ endosome transport" EXACT [OBOL:automatic] synonym: "maturing face to endosome transport" EXACT [OBOL:automatic] synonym: "trans Golgi network Maxillarorgan endosome transport" EXACT [OBOL:automatic] synonym: "trans Golgi network larval maxillary sense organ endosome transport" EXACT [OBOL:automatic] synonym: "trans Golgi network maxillary element endosome transport" EXACT [OBOL:automatic] synonym: "trans Golgi network terminal organ endosome transport" EXACT [OBOL:automatic] synonym: "trans Golgi network to endosome transport" EXACT [OBOL:automatic] synonym: "trans-Golgi network Maxillarorgan endosome transport" EXACT [OBOL:automatic] synonym: "trans-Golgi network larval maxillary sense organ endosome transport" EXACT [OBOL:automatic] synonym: "trans-Golgi network maxillary element endosome transport" EXACT [OBOL:automatic] synonym: "trans-Golgi network terminal organ endosome transport" EXACT [OBOL:automatic] synonym: "trans-Golgi network to endosome transport" EXACT [OBOL:automatic] ! seconds spent parsing GO:0006895: 47.81 ! parse: GO:0006896 using "Golgi to vacuole transport" => cdef(GO:0006810, [OBO_REL:results_in_transport_from=GO:0005794, OBO_REL:results_in_transport_to=GO:0005773]) [-3] ! parse: GO:0006896 using "Golgi to vacuole transport" => cdef(GO:0006810, [and=results_in_transport_of(GO:0005773)/unfolds_in(FBbt:00002690), OBO_REL:unfolds_in=GO:0005794]) [-3] ! parse: GO:0006896 using "Golgi to vacuole vesicle-mediated transport" => cdef(GO:0016192, [OBO_REL:results_in_transport_from=GO:0005794, OBO_REL:results_in_transport_to=GO:0005773]) [-3] ! parse: GO:0006896 using "Golgi to vacuole vesicle-mediated transport" => cdef(GO:0016192, [and=results_in_transport_of(GO:0005773)/unfolds_in(FBbt:00002690), OBO_REL:unfolds_in=GO:0005794]) [-3] ! no existing xp def ! def: "The directed movement of substances from the Golgi to the vacuole." ! PROPOSED: vesicle-mediated transport that and results_in_transport_of(GO:0005773)/unfolds_in(FBbt:00002690) and OBO_REL:unfolds_in Golgi apparatus [cdef(GO:0016192, [and=results_in_transport_of(GO:0005773)/unfolds_in(FBbt:00002690), OBO_REL:unfolds_in=GO:0005794])] [Term] id: GO:0006896 ! Golgi to vacuole transport intersection_of: GO:0016192 ! vesicle-mediated transport intersection_of: and results_in_transport_of(GO:0005773)/unfolds_in(FBbt:00002690) intersection_of: OBO_REL:unfolds_in GO:0005794 ! Golgi apparatus ! seconds spent parsing GO:0006896: 36.05 ! No parse for: GO:0006897 endocytosis ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0006900 using "vesicle biosynthesis" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=GO:0031982]) [-2] ! parse: GO:0006900 using "vesicle formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=GO:0031982]) [-2] ! parse: GO:0006900 using "vesicle formation" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0031982]) [-2] ! parse: GO:0006900 using "vesicle formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0031982]) [-2] ! no existing xp def ! def: "The evagination of a membrane, resulting in formation of a vesicle." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of vesicle [cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0031982])] [Term] id: GO:0006900 ! membrane budding intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of GO:0031982 ! vesicle synonym: "vesicle anatomical structure formation" EXACT [OBOL:automatic] synonym: "vesicle formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0006900: 40.07 ! No parse for: GO:0006901 vesicle coating ! No parse for: GO:0006903 vesicle targeting ! Already have xp for: GO:0006904 vesicle docking during exocytosis ! CURRENT : vesicle docking that OBO_REL:part_of exocytosis [cdef(GO:0048278, [OBO_REL:part_of=GO:0006887])] ! No parse for: GO:0006906 vesicle fusion ! No parse for: GO:0006909 phagocytosis ! Already have xp for: GO:0006910 phagocytosis, recognition ! CURRENT : cell recognition that OBO_REL:has_agent phagocytosis, [cdef(GO:0008037, [OBO_REL:has_agent=cell:phagocytosis_,])] ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0006911 using "phagosome biosynthesis" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=GO:0045335]) [-2] ! parse: GO:0006911 using "phagosome formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=GO:0045335]) [-2] ! parse: GO:0006911 using "phagosome formation" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0045335]) [-2] ! parse: GO:0006911 using "phagosome formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0045335]) [-2] ! no existing xp def ! def: "The internalization of bacteria, immune complexes and other particulate matter or of an apoptotic cell by phagocytosis, including the membrane and cytoskeletal processes required, which involves one of three mechanisms: zippering of pseudopods around a target via repeated receptor-ligand interactions, sinking of the target directly into plasma membrane of the phagocytosing cell, or induced uptake via an enhanced membrane ruffling of the phagocytosing cell similar to macropinocytosis." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of phagocytic vesicle [cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0045335])] [Term] id: GO:0006911 ! phagocytosis, engulfment intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of GO:0045335 ! phagocytic vesicle synonym: "phagocytic vesicle anatomical structure formation" EXACT [OBOL:automatic] synonym: "phagocytic vesicle formation" EXACT [OBOL:automatic] synonym: "phagocytic vesicle formation of an anatomical structure" EXACT [OBOL:automatic] synonym: "phagosome anatomical structure formation" EXACT [OBOL:automatic] synonym: "phagosome formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0006911: 20.91 ! Already have xp for: GO:0006921 cell structure disassembly during apoptosis ! CURRENT : cellular component disassembly that OBO_REL:part_of apoptosis [cdef(GO:0022411, [OBO_REL:part_of=GO:0006915])] ! No parse for: GO:0006928 cell motility ! No relation defined: results_in_contraction_of ! No relation defined: results_in_contraction_of ! parse: GO:0006936 using "muscle contraction" => cdef(GO:0008150, [results_in_contraction_of=MA:0000015]) [-2] ! parse: GO:0006936 using "muscle contraction" => cdef(GO:0008150, [results_in_contraction_of=ZFA:0000548]) [-2] ! no existing xp def ! def: "A process leading to shortening and/or development of tension in muscle tissue. Muscle contraction occurs by a sliding filament mechanism whereby actin filaments slide inward among the myosin filaments." ! PROPOSED: biological_process that results_in_contraction_of musculature system [cdef(GO:0008150, [results_in_contraction_of=ZFA:0000548])] [Term] id: GO:0006936 ! muscle contraction intersection_of: GO:0008150 ! biological_process intersection_of: results_in_contraction_of ZFA:0000548 ! musculature system synonym: "muscles contraction" EXACT [OBOL:automatic] synonym: "musculature system contraction" EXACT [OBOL:automatic] ! seconds spent parsing GO:0006936: 16.83 ! No relation defined: results_in_contraction_of ! parse: GO:0006939 using "smooth muscle contraction" => cdef(GO:0008150, [results_in_contraction_of=MA:0000166]) [-2] ! no existing xp def ! def: "A process leading to shortening and/or development of tension in smooth muscle tissue." ! PROPOSED: biological_process that results_in_contraction_of smooth muscle [cdef(GO:0008150, [results_in_contraction_of=MA:0000166])] [Term] id: GO:0006939 ! smooth muscle contraction intersection_of: GO:0008150 ! biological_process intersection_of: results_in_contraction_of MA:0000166 ! smooth muscle ! seconds spent parsing GO:0006939: 4.73 ! No parse for: GO:0006944 membrane fusion ! Already have xp for: GO:0006968 cellular defense response ! CURRENT : defense response that OBO_REL:part_of cellularization [cdef(GO:0006952, [OBO_REL:part_of=GO:0007349])] ! No parse for: GO:0006973 intracellular accumulation of glycerol ! No parse for: GO:0006983 ER overload response ! No parse for: GO:0006984 ER-nuclear signaling pathway ! No parse for: GO:0006995 cellular response to nitrogen starvation ! parse: GO:0006996 using "organelle organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0043226]) [-2] ! no existing xp def ! def: "A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of any organelle within a cell." ! PROPOSED: cellular component organization and biogenesis that OBO_REL:results_in_structural_change_to organelle [cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0043226])] [Term] id: GO:0006996 ! organelle organization and biogenesis intersection_of: GO:0016043 ! cellular component organization and biogenesis intersection_of: OBO_REL:results_in_structural_change_to GO:0043226 ! organelle synonym: "organelle organization" EXACT [OBOL:automatic] ! seconds spent parsing GO:0006996: 14.8 ! parse: GO:0006997 using "nucleus organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0005634]) [-2] ! no existing xp def ! def: "A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the nucleus." ! PROPOSED: cellular component organization and biogenesis that OBO_REL:results_in_structural_change_to nucleus [cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0005634])] [Term] id: GO:0006997 ! nuclear organization and biogenesis intersection_of: GO:0016043 ! cellular component organization and biogenesis intersection_of: OBO_REL:results_in_structural_change_to GO:0005634 ! nucleus synonym: "nucleus organization" EXACT [OBOL:automatic] ! seconds spent parsing GO:0006997: 17.7 ! parse: GO:0006998 using "nuclear membrane organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0031965]) [-2] ! no existing xp def ! def: "A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the nuclear membrane." ! PROPOSED: cellular component organization and biogenesis that OBO_REL:results_in_structural_change_to nuclear membrane [cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0031965])] [Term] id: GO:0006998 ! nuclear membrane organization and biogenesis intersection_of: GO:0016043 ! cellular component organization and biogenesis intersection_of: OBO_REL:results_in_structural_change_to GO:0031965 ! nuclear membrane synonym: "nuclear membrane organization" EXACT [OBOL:automatic] ! seconds spent parsing GO:0006998: 11.16 ! parse: GO:0006999 using "nuclear pore complex organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0005643]) [-2] ! parse: GO:0006999 using "nuclear pore organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0005643]) [-2] ! no existing xp def ! def: "A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the nuclear pore." ! PROPOSED: cellular component organization and biogenesis that OBO_REL:results_in_structural_change_to nuclear pore [cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0005643])] [Term] id: GO:0006999 ! nuclear pore organization and biogenesis intersection_of: GO:0016043 ! cellular component organization and biogenesis intersection_of: OBO_REL:results_in_structural_change_to GO:0005643 ! nuclear pore synonym: "NPC organization" EXACT [OBOL:automatic] synonym: "NPC organization and biogenesis" EXACT [OBOL:automatic] synonym: "nuclear pore complex organization" EXACT [OBOL:automatic] synonym: "nuclear pore organization" EXACT [OBOL:automatic] ! seconds spent parsing GO:0006999: 22.05 ! parse: GO:0007000 using "nucleolus organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0005730]) [-2] ! no existing xp def ! def: "A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly the nucleolus." ! PROPOSED: cellular component organization and biogenesis that OBO_REL:results_in_structural_change_to nucleolus [cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0005730])] [Term] id: GO:0007000 ! nucleolus organization and biogenesis intersection_of: GO:0016043 ! cellular component organization and biogenesis intersection_of: OBO_REL:results_in_structural_change_to GO:0005730 ! nucleolus synonym: "nucleolus organization" EXACT [OBOL:automatic] ! seconds spent parsing GO:0007000: 11.0 ! No parse for: GO:0007001 chromosome organization and biogenesis (sensu Eukaryota) ! No parse for: GO:0007004 telomere maintenance via telomerase ! parse: GO:0007005 using "mitochondria organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0005739]) [-2] ! parse: GO:0007005 using "mitochondrion organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0005739]) [-2] ! no existing xp def ! def: "A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a mitochondrion; includes mitochondrial morphology and distribution, and replication of the mitochondrial genome as well as synthesis of new mitochondrial components." ! PROPOSED: cellular component organization and biogenesis that OBO_REL:results_in_structural_change_to mitochondrion [cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0005739])] [Term] id: GO:0007005 ! mitochondrion organization and biogenesis intersection_of: GO:0016043 ! cellular component organization and biogenesis intersection_of: OBO_REL:results_in_structural_change_to GO:0005739 ! mitochondrion synonym: "mitochondria organization" EXACT [OBOL:automatic] synonym: "mitochondrion organization" EXACT [OBOL:automatic] ! seconds spent parsing GO:0007005: 16.53 ! parse: GO:0007006 using "mitochondrial membrane organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0031966]) [-2] ! no existing xp def ! def: "A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the mitochondrial membrane, the lipid bilayer surrounding a mitochondrion." ! PROPOSED: cellular component organization and biogenesis that OBO_REL:results_in_structural_change_to mitochondrial membrane [cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0031966])] [Term] id: GO:0007006 ! mitochondrial membrane organization and biogenesis intersection_of: GO:0016043 ! cellular component organization and biogenesis intersection_of: OBO_REL:results_in_structural_change_to GO:0031966 ! mitochondrial membrane synonym: "mitochondrial membrane organization" EXACT [OBOL:automatic] ! seconds spent parsing GO:0007006: 11.18 ! parse: GO:0007009 using "plasma membrane organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0005886]) [-2] ! parse: GO:0007009 using "plasma membrane organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0016020, OBO_REL:unfolds_in=MA:0002501]) [-3] ! no existing xp def ! def: "A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the plasma membrane." ! PROPOSED: cellular component organization and biogenesis that OBO_REL:results_in_structural_change_to plasma membrane [cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0005886])] [Term] id: GO:0007009 ! plasma membrane organization and biogenesis intersection_of: GO:0016043 ! cellular component organization and biogenesis intersection_of: OBO_REL:results_in_structural_change_to GO:0005886 ! plasma membrane synonym: "cell membrane organization" EXACT [OBOL:automatic] synonym: "cell membrane organization and biogenesis" EXACT [OBOL:automatic] synonym: "cytoplasmic membrane organization" EXACT [OBOL:automatic] synonym: "cytoplasmic membrane organization and biogenesis" EXACT [OBOL:automatic] synonym: "plasma membrane cation-transporting ATPase organization" EXACT [OBOL:automatic] synonym: "plasma membrane cation-transporting ATPase organization and biogenesis" EXACT [OBOL:automatic] synonym: "plasma membrane copper transporter organization" EXACT [OBOL:automatic] synonym: "plasma membrane copper transporter organization and biogenesis" EXACT [OBOL:automatic] synonym: "plasma membrane long-chain fatty acid transporter organization" EXACT [OBOL:automatic] synonym: "plasma membrane long-chain fatty acid transporter organization and biogenesis" EXACT [OBOL:automatic] synonym: "plasma membrane organization" EXACT [OBOL:automatic] synonym: "plasmalemma organization" EXACT [OBOL:automatic] synonym: "plasmalemma organization and biogenesis" EXACT [OBOL:automatic] ! seconds spent parsing GO:0007009: 25.29 ! parse: GO:0007010 using "cytoskeleton organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0005856]) [-2] ! no existing xp def ! def: "A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures." ! PROPOSED: cellular component organization and biogenesis that OBO_REL:results_in_structural_change_to cytoskeleton [cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0005856])] [Term] id: GO:0007010 ! cytoskeleton organization and biogenesis intersection_of: GO:0016043 ! cellular component organization and biogenesis intersection_of: OBO_REL:results_in_structural_change_to GO:0005856 ! cytoskeleton synonym: "cytoskeleton organization" EXACT [OBOL:automatic] ! seconds spent parsing GO:0007010: 36.57 ! No parse for: GO:0007014 indirect flight muscle actin ubiquitination ! parse: GO:0007015 using "actin filament organization" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0005884]) [-2] ! no existing xp def ! def: "Control of the spatial distribution of actin filaments; includes organizing filaments into meshworks, bundles, or other structures, as by cross-linking." ! PROPOSED: cellular component organization and biogenesis that OBO_REL:results_in_structural_change_to actin filament [cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0005884])] [Term] id: GO:0007015 ! actin filament organization intersection_of: GO:0016043 ! cellular component organization and biogenesis intersection_of: OBO_REL:results_in_structural_change_to GO:0005884 ! actin filament synonym: "actin filament organization and biogenesis" EXACT [OBOL:automatic] ! seconds spent parsing GO:0007015: 11.03 ! No parse for: GO:0007017 microtubule-based process ! No parse for: GO:0007018 microtubule-based movement ! parse: GO:0007019 using "microtubule disassembly" => cdef(GO:0022411, [OBO_REL:results_in_breakdown_of=GO:0005874]) [-2] ! no existing xp def ! def: "The removal of tubulin heterodimers from one or both ends of a microtubule." ! PROPOSED: cellular component disassembly that OBO_REL:results_in_breakdown_of microtubule [cdef(GO:0022411, [OBO_REL:results_in_breakdown_of=GO:0005874])] [Term] id: GO:0007019 ! microtubule depolymerization intersection_of: GO:0022411 ! cellular component disassembly intersection_of: OBO_REL:results_in_breakdown_of GO:0005874 ! microtubule synonym: "cell structure disassembly of microtubule" EXACT [OBOL:automatic] synonym: "cellular component disassembly of microtubule" EXACT [OBOL:automatic] synonym: "disassembly of microtubule" EXACT [OBOL:automatic] synonym: "microtubule cell structure disassembly" EXACT [OBOL:automatic] synonym: "microtubule cellular component disassembly" EXACT [OBOL:automatic] ! seconds spent parsing GO:0007019: 14.66 ! No parse for: GO:0007020 microtubule nucleation ! Already have xp for: GO:0007026 negative regulation of microtubule depolymerization ! CURRENT : biological regulation that OBO_REL:negatively_regulates microtubule depolymerization and regulates microtubule depolymerization [cdef(GO:0065007, [OBO_REL:negatively_regulates=GO:0007019, regulates=GO:0007019])] ! No parse for: GO:0007027 negative regulation of axonemal microtubule depolymerization ! parse: GO:0007028 using "cytoplasm organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0005737]) [-2] ! no existing xp def ! def: "A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the cytoplasm and its components." ! PROPOSED: cellular component organization and biogenesis that OBO_REL:results_in_structural_change_to cytoplasm [cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0005737])] [Term] id: GO:0007028 ! cytoplasm organization and biogenesis intersection_of: GO:0016043 ! cellular component organization and biogenesis intersection_of: OBO_REL:results_in_structural_change_to GO:0005737 ! cytoplasm synonym: "cytoplasm organization" EXACT [OBOL:automatic] ! seconds spent parsing GO:0007028: 11.0 ! parse: GO:0007029 using "ER organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0005783]) [-2] ! parse: GO:0007029 using "endoplasmic reticulum organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0005783]) [-2] ! no existing xp def ! def: "A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the endoplasmic reticulum." ! PROPOSED: cellular component organization and biogenesis that OBO_REL:results_in_structural_change_to endoplasmic reticulum [cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0005783])] [Term] id: GO:0007029 ! endoplasmic reticulum organization and biogenesis intersection_of: GO:0016043 ! cellular component organization and biogenesis intersection_of: OBO_REL:results_in_structural_change_to GO:0005783 ! endoplasmic reticulum synonym: "ER organization" EXACT [OBOL:automatic] synonym: "endoplasmic reticulum organization" EXACT [OBOL:automatic] ! seconds spent parsing GO:0007029: 25.72 ! parse: GO:0007030 using "Golgi organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0005794]) [-2] ! no existing xp def ! def: "The assembly and arrangement of the Golgi apparatus." ! PROPOSED: cellular component organization and biogenesis that OBO_REL:results_in_structural_change_to Golgi apparatus [cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0005794])] [Term] id: GO:0007030 ! Golgi organization and biogenesis intersection_of: GO:0016043 ! cellular component organization and biogenesis intersection_of: OBO_REL:results_in_structural_change_to GO:0005794 ! Golgi apparatus synonym: "Golgi apparatus organization" EXACT [OBOL:automatic] synonym: "Golgi apparatus organization and biogenesis" EXACT [OBOL:automatic] synonym: "Golgi complex organization" EXACT [OBOL:automatic] synonym: "Golgi complex organization and biogenesis" EXACT [OBOL:automatic] synonym: "Golgi organization" EXACT [OBOL:automatic] ! seconds spent parsing GO:0007030: 11.02 ! parse: GO:0007031 using "peroxisome organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0005777]) [-2] ! no existing xp def ! def: "A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a peroxisome." ! PROPOSED: cellular component organization and biogenesis that OBO_REL:results_in_structural_change_to peroxisome [cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0005777])] [Term] id: GO:0007031 ! peroxisome organization and biogenesis intersection_of: GO:0016043 ! cellular component organization and biogenesis intersection_of: OBO_REL:results_in_structural_change_to GO:0005777 ! peroxisome synonym: "peroxisomal fatty acyl transporter organization" EXACT [OBOL:automatic] synonym: "peroxisomal fatty acyl transporter organization and biogenesis" EXACT [OBOL:automatic] synonym: "peroxisomal membrane transporter organization" EXACT [OBOL:automatic] synonym: "peroxisomal membrane transporter organization and biogenesis" EXACT [OBOL:automatic] synonym: "peroxisome organization" EXACT [OBOL:automatic] synonym: "peroxisome receptor organization" EXACT [OBOL:automatic] synonym: "peroxisome receptor organization and biogenesis" EXACT [OBOL:automatic] ! seconds spent parsing GO:0007031: 20.98 ! parse: GO:0007032 using "endosome organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0005768]) [-2] ! no existing xp def ! def: "A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of endosomes." ! PROPOSED: cellular component organization and biogenesis that OBO_REL:results_in_structural_change_to endosome [cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0005768])] [Term] id: GO:0007032 ! endosome organization and biogenesis intersection_of: GO:0016043 ! cellular component organization and biogenesis intersection_of: OBO_REL:results_in_structural_change_to GO:0005768 ! endosome synonym: "endosomal oligosaccharide transporter organization" EXACT [OBOL:automatic] synonym: "endosomal oligosaccharide transporter organization and biogenesis" EXACT [OBOL:automatic] synonym: "endosome organization" EXACT [OBOL:automatic] ! seconds spent parsing GO:0007032: 11.0 ! parse: GO:0007033 using "vacuole organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0005773]) [-2] ! no existing xp def ! def: "A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a vacuole." ! PROPOSED: cellular component organization and biogenesis that OBO_REL:results_in_structural_change_to vacuole [cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0005773])] [Term] id: GO:0007033 ! vacuole organization and biogenesis intersection_of: GO:0016043 ! cellular component organization and biogenesis intersection_of: OBO_REL:results_in_structural_change_to GO:0005773 ! vacuole synonym: "vacuolar carboxypeptidase Y organization" EXACT [OBOL:automatic] synonym: "vacuolar carboxypeptidase Y organization and biogenesis" EXACT [OBOL:automatic] synonym: "vacuole organization" EXACT [OBOL:automatic] ! seconds spent parsing GO:0007033: 15.01 ! No parse for: GO:0007034 vacuolar transport ! No parse for: GO:0007035 vacuolar acidification ! No parse for: GO:0007036 vacuolar calcium ion homeostasis ! No parse for: GO:0007037 vacuolar phosphate transport ! No parse for: GO:0007039 vacuolar protein catabolic process ! parse: GO:0007040 using "lysosome organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0005764]) [-2] ! no existing xp def ! def: "A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of lysosomes." ! PROPOSED: cellular component organization and biogenesis that OBO_REL:results_in_structural_change_to lysosome [cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0005764])] [Term] id: GO:0007040 ! lysosome organization and biogenesis intersection_of: GO:0016043 ! cellular component organization and biogenesis intersection_of: OBO_REL:results_in_structural_change_to GO:0005764 ! lysosome synonym: "lysosomal cysteine-type endopeptidase organization" EXACT [OBOL:automatic] synonym: "lysosomal cysteine-type endopeptidase organization and biogenesis" EXACT [OBOL:automatic] synonym: "lysosomal protein stabilization organization" EXACT [OBOL:automatic] synonym: "lysosomal protein stabilization organization and biogenesis" EXACT [OBOL:automatic] synonym: "lysosome organization" EXACT [OBOL:automatic] ! seconds spent parsing GO:0007040: 11.01 ! No parse for: GO:0007041 lysosomal transport ! No parse for: GO:0007042 lysosomal lumen acidification ! parse: GO:0007043 using "intercellular junction assembly" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0005911]) [-2] ! no existing xp def ! def: "The aggregation and bonding together of a set of components to form a junction between cells." ! PROPOSED: cellular component assembly that OBO_REL:results_in_creation_of intercellular junction [cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0005911])] [Term] id: GO:0007043 ! intercellular junction assembly intersection_of: GO:0022607 ! cellular component assembly intersection_of: OBO_REL:results_in_creation_of GO:0005911 ! intercellular junction synonym: "assembly and maintenance of cell-cell junction" EXACT [OBOL:automatic] synonym: "assembly and maintenance of intercellular junction" EXACT [OBOL:automatic] synonym: "assembly of cell-cell junction" EXACT [OBOL:automatic] synonym: "assembly of intercellular junction" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of cell-cell junction" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of intercellular junction" EXACT [OBOL:automatic] synonym: "biogenesis of cell-cell junction" EXACT [OBOL:automatic] synonym: "biogenesis of intercellular junction" EXACT [OBOL:automatic] synonym: "cell structure assembly of cell-cell junction" EXACT [OBOL:automatic] synonym: "cell structure assembly of intercellular junction" EXACT [OBOL:automatic] synonym: "cell-cell junction assembly" EXACT [OBOL:automatic] synonym: "cell-cell junction assembly and maintenance" EXACT [OBOL:automatic] synonym: "cell-cell junction biogenesis" EXACT [OBOL:automatic] synonym: "cell-cell junction biogenesis and assembly" EXACT [OBOL:automatic] synonym: "cell-cell junction cell structure assembly" EXACT [OBOL:automatic] synonym: "cell-cell junction cellular component assembly" EXACT [OBOL:automatic] synonym: "cell-cell junction complex assembly" EXACT [OBOL:automatic] synonym: "cell-cell junction formation" EXACT [OBOL:automatic] synonym: "cellular component assembly of cell-cell junction" EXACT [OBOL:automatic] synonym: "cellular component assembly of intercellular junction" EXACT [OBOL:automatic] synonym: "complex assembly of cell-cell junction" EXACT [OBOL:automatic] synonym: "complex assembly of intercellular junction" EXACT [OBOL:automatic] synonym: "formation of cell-cell junction" EXACT [OBOL:automatic] synonym: "formation of intercellular junction" EXACT [OBOL:automatic] synonym: "intercellular junction assembly and maintenance" EXACT [OBOL:automatic] synonym: "intercellular junction biogenesis" EXACT [OBOL:automatic] synonym: "intercellular junction biogenesis and assembly" EXACT [OBOL:automatic] synonym: "intercellular junction cell structure assembly" EXACT [OBOL:automatic] synonym: "intercellular junction cellular component assembly" EXACT [OBOL:automatic] synonym: "intercellular junction complex assembly" EXACT [OBOL:automatic] synonym: "intercellular junction formation" EXACT [OBOL:automatic] def: "The aggregation and bonding together of a set of macromolecules to form a cell-cell junction" [OBOL:automatic] ! seconds spent parsing GO:0007043: 5.53 ! No parse for: GO:0007044 cell-substrate junction assembly ! parse: GO:0007045 using "hemi-adherens junction assembly" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0005925]) [-2] ! no existing xp def ! def: "The formation of a hemi-adherens junction. Within proximal sheath cells, actin/myosin bundles are anchored to the plasma membrane at plaque-like structures termed hemi-adherens junctions, which in turn are closely associated with the gonadal basal lamina. It is proposed that hemi-adherens junctions function to anchor the myofilament apparatus within the basal plasma membrane of the sheath cell and to the exterior basal lamina." ! PROPOSED: cellular component assembly that OBO_REL:results_in_creation_of focal adhesion [cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0005925])] [Term] id: GO:0007045 ! hemi-adherens junction assembly intersection_of: GO:0022607 ! cellular component assembly intersection_of: OBO_REL:results_in_creation_of GO:0005925 ! focal adhesion synonym: "assembly and maintenance of focal adhesion" EXACT [OBOL:automatic] synonym: "assembly and maintenance of focal contact" EXACT [OBOL:automatic] synonym: "assembly and maintenance of hemi-adherens junction" EXACT [OBOL:automatic] synonym: "assembly of focal adhesion" EXACT [OBOL:automatic] synonym: "assembly of focal contact" EXACT [OBOL:automatic] synonym: "assembly of hemi-adherens junction" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of focal adhesion" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of focal contact" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of hemi-adherens junction" EXACT [OBOL:automatic] synonym: "biogenesis of focal adhesion" EXACT [OBOL:automatic] synonym: "biogenesis of focal contact" EXACT [OBOL:automatic] synonym: "biogenesis of hemi-adherens junction" EXACT [OBOL:automatic] synonym: "cell structure assembly of focal adhesion" EXACT [OBOL:automatic] synonym: "cell structure assembly of focal contact" EXACT [OBOL:automatic] synonym: "cell structure assembly of hemi-adherens junction" EXACT [OBOL:automatic] synonym: "cellular component assembly of focal adhesion" EXACT [OBOL:automatic] synonym: "cellular component assembly of focal contact" EXACT [OBOL:automatic] synonym: "cellular component assembly of hemi-adherens junction" EXACT [OBOL:automatic] synonym: "complex assembly of focal adhesion" EXACT [OBOL:automatic] synonym: "complex assembly of focal contact" EXACT [OBOL:automatic] synonym: "complex assembly of hemi-adherens junction" EXACT [OBOL:automatic] synonym: "focal adhesion assembly" EXACT [OBOL:automatic] synonym: "focal adhesion assembly and maintenance" EXACT [OBOL:automatic] synonym: "focal adhesion biogenesis" EXACT [OBOL:automatic] synonym: "focal adhesion biogenesis and assembly" EXACT [OBOL:automatic] synonym: "focal adhesion cell structure assembly" EXACT [OBOL:automatic] synonym: "focal adhesion cellular component assembly" EXACT [OBOL:automatic] synonym: "focal adhesion complex assembly" EXACT [OBOL:automatic] synonym: "focal adhesion formation" EXACT [OBOL:automatic] synonym: "focal contact assembly" EXACT [OBOL:automatic] synonym: "focal contact assembly and maintenance" EXACT [OBOL:automatic] synonym: "focal contact biogenesis" EXACT [OBOL:automatic] synonym: "focal contact biogenesis and assembly" EXACT [OBOL:automatic] synonym: "focal contact cell structure assembly" EXACT [OBOL:automatic] synonym: "focal contact cellular component assembly" EXACT [OBOL:automatic] synonym: "focal contact complex assembly" EXACT [OBOL:automatic] synonym: "focal contact formation" EXACT [OBOL:automatic] synonym: "formation of focal adhesion" EXACT [OBOL:automatic] synonym: "formation of focal contact" EXACT [OBOL:automatic] synonym: "formation of hemi-adherens junction" EXACT [OBOL:automatic] synonym: "hemi-adherens junction assembly and maintenance" EXACT [OBOL:automatic] synonym: "hemi-adherens junction biogenesis" EXACT [OBOL:automatic] synonym: "hemi-adherens junction biogenesis and assembly" EXACT [OBOL:automatic] synonym: "hemi-adherens junction cell structure assembly" EXACT [OBOL:automatic] synonym: "hemi-adherens junction cellular component assembly" EXACT [OBOL:automatic] synonym: "hemi-adherens junction complex assembly" EXACT [OBOL:automatic] synonym: "hemi-adherens junction formation" EXACT [OBOL:automatic] def: "The aggregation and bonding together of a set of macromolecules to form a focal adhesion" [OBOL:automatic] ! seconds spent parsing GO:0007045: 5.61 ! parse: GO:0007047 using "cell wall organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0005618]) [-2] ! no existing xp def ! def: "A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the cell wall, the rigid or semi-rigid envelope lying outside the cell membrane of plant, fungal and most prokaryotic cells, maintaining their shape and protecting them from osmotic lysis." ! PROPOSED: cellular component organization and biogenesis that OBO_REL:results_in_structural_change_to cell wall [cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0005618])] [Term] id: GO:0007047 ! cell wall organization and biogenesis intersection_of: GO:0016043 ! cellular component organization and biogenesis intersection_of: OBO_REL:results_in_structural_change_to GO:0005618 ! cell wall synonym: "cell wall organization" EXACT [OBOL:automatic] ! seconds spent parsing GO:0007047: 24.04 ! No parse for: GO:0007049 cell cycle ! No parse for: GO:0007050 cell cycle arrest ! parse: GO:0007051 using "spindle organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0005819]) [-2] ! no existing xp def ! def: "A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the spindle, the array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during DNA segregation and serves to move the duplicated chromosomes apart." ! PROPOSED: cellular component organization and biogenesis that OBO_REL:results_in_structural_change_to spindle [cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0005819])] [Term] id: GO:0007051 ! spindle organization and biogenesis intersection_of: GO:0016043 ! cellular component organization and biogenesis intersection_of: OBO_REL:results_in_structural_change_to GO:0005819 ! spindle synonym: "spindle organization" EXACT [OBOL:automatic] ! seconds spent parsing GO:0007051: 11.0 ! Already have xp for: GO:0007052 mitotic spindle organization and biogenesis ! CURRENT : spindle organization and biogenesis that OBO_REL:part_of mitosis [cdef(GO:0007051, [OBO_REL:part_of=GO:0007067])] ! Already have xp for: GO:0007053 spindle assembly involved in male meiosis ! CURRENT : spindle assembly that OBO_REL:part_of male meiosis [cdef(GO:0051225, [OBO_REL:part_of=GO:0007140])] ! Already have xp for: GO:0007054 spindle assembly involved in male meiosis I ! CURRENT : spindle assembly that OBO_REL:part_of male meiosis I [cdef(GO:0051225, [OBO_REL:part_of=GO:0007141])] ! No parse for: GO:0007055 spindle assembly involved male meiosis II ! Already have xp for: GO:0007056 spindle assembly involved in female meiosis ! CURRENT : spindle assembly that OBO_REL:part_of female meiosis [cdef(GO:0051225, [OBO_REL:part_of=GO:0007143])] ! Already have xp for: GO:0007057 spindle assembly involved in female meiosis I ! CURRENT : spindle assembly that OBO_REL:part_of female meiosis I [cdef(GO:0051225, [OBO_REL:part_of=GO:0007144])] ! Already have xp for: GO:0007058 spindle assembly involved in female meiosis II ! CURRENT : spindle assembly that OBO_REL:part_of female meiosis II [cdef(GO:0051225, [OBO_REL:part_of=GO:0007147])] ! No parse for: GO:0007059 chromosome segregation ! Already have xp for: GO:0007076 mitotic chromosome condensation ! CURRENT : chromosome condensation that OBO_REL:part_of mitosis [cdef(GO:0030261, [OBO_REL:part_of=GO:0007067])] ! Already have xp for: GO:0007079 mitotic chromosome movement towards spindle pole ! CURRENT : chromosome movement towards spindle pole that OBO_REL:part_of mitosis [cdef(GO:0051305, [OBO_REL:part_of=GO:0007067])] ! Already have xp for: GO:0007083 mitotic chromosome decondensation ! CURRENT : chromosome decondensation that OBO_REL:part_of mitosis [cdef(GO:0051312, [OBO_REL:part_of=GO:0007067])] ! No parse for: GO:0007086 vesicle fusion with nuclear membrane ! Already have xp for: GO:0007092 anaphase-promoting complex activation during mitotic cell cycle ! CURRENT : anaphase-promoting complex activation that OBO_REL:part_of mitosis [cdef(GO:0051488, [OBO_REL:part_of=GO:0007067])] ! No parse for: GO:0007097 nuclear migration ! No parse for: GO:0007098 centrosome cycle ! No parse for: GO:0007099 centriole replication ! parse: GO:0007103 using "spindle pole body duplication in nuclear envelope" => cdef(GO:0030474, [OBO_REL:unfolds_in=GO:0005635]) [-2] ! no existing xp def ! def: "Construction of a new spindle pole body adjacent to the existing spindle pole body in the nuclear envelope; usually occurs about the time of bud emergence." ! PROPOSED: spindle pole body duplication that OBO_REL:unfolds_in nuclear envelope [cdef(GO:0030474, [OBO_REL:unfolds_in=GO:0005635])] [Term] id: GO:0007103 ! spindle pole body duplication in nuclear envelope intersection_of: GO:0030474 ! spindle pole body duplication intersection_of: OBO_REL:unfolds_in GO:0005635 ! nuclear envelope synonym: "spindle pole body assembly in nuclear envelope" EXACT [OBOL:automatic] synonym: "spindle pole body assembly in the nuclear envelope" EXACT [OBOL:automatic] synonym: "spindle pole body assembly through the nuclear envelope" EXACT [OBOL:automatic] synonym: "spindle pole body biogenesis in nuclear envelope" EXACT [OBOL:automatic] synonym: "spindle pole body biogenesis in the nuclear envelope" EXACT [OBOL:automatic] synonym: "spindle pole body biogenesis through the nuclear envelope" EXACT [OBOL:automatic] synonym: "spindle pole body biosynthesis in nuclear envelope" EXACT [OBOL:automatic] synonym: "spindle pole body biosynthesis in the nuclear envelope" EXACT [OBOL:automatic] synonym: "spindle pole body biosynthesis through the nuclear envelope" EXACT [OBOL:automatic] synonym: "spindle pole body duplication (sensu Fungi) in nuclear envelope" EXACT [OBOL:automatic] synonym: "spindle pole body duplication (sensu Fungi) in the nuclear envelope" EXACT [OBOL:automatic] synonym: "spindle pole body duplication (sensu Fungi) through the nuclear envelope" EXACT [OBOL:automatic] synonym: "spindle pole body formation in nuclear envelope" EXACT [OBOL:automatic] synonym: "spindle pole body formation in the nuclear envelope" EXACT [OBOL:automatic] synonym: "spindle pole body formation through the nuclear envelope" EXACT [OBOL:automatic] synonym: "spindle pole body replication in nuclear envelope" EXACT [OBOL:automatic] synonym: "spindle pole body replication in the nuclear envelope" EXACT [OBOL:automatic] synonym: "spindle pole body replication through the nuclear envelope" EXACT [OBOL:automatic] ! seconds spent parsing GO:0007103: 43.7 ! No parse for: GO:0007105 cytokinesis, site selection ! No parse for: GO:0007107 membrane addition at site of cytokinesis ! No parse for: GO:0007114 cell budding ! Already have xp for: GO:0007120 axial cellular bud site selection ! CURRENT : biological_process that OBO_REL:results_in_selection_of axial bud site [cdef(GO:0008150, [OBO_REL:results_in_selection_of=cell:axial_bud_site])] ! No parse for: GO:0007129 synapsis ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0007130 using "synaptonemal complex assembly" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0000795]) [-2] ! parse: GO:0007130 using "synaptonemal complex formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=GO:0000795]) [-2] ! parse: GO:0007130 using "synaptonemal complex formation" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0000795]) [-2] ! parse: GO:0007130 using "synaptonemal complex formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0000795]) [-2] ! no existing xp def ! def: "The cell cycle process whereby the synaptonemal complex is formed. This is a structure that holds paired chromosomes together during prophase I of meiosis and that promotes genetic recombination." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of synaptonemal complex [cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0000795])] [Term] id: GO:0007130 ! synaptonemal complex assembly intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of GO:0000795 ! synaptonemal complex synonym: "synaptonemal complex anatomical structure formation" EXACT [OBOL:automatic] synonym: "synaptonemal complex formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0007130: 11.67 ! No parse for: GO:0007154 cell communication ! parse: GO:0007155 using "cell adhesion" => cdef(GO:0022610, [OBO_REL:results_in_adhesion_to=CL:0000000]) [-2] ! parse: GO:0007155 using "cell adhesion" => cdef(GO:0022610, [OBO_REL:results_in_adhesion_to=ZFA:0009000]) [-2] ! no existing xp def ! def: "The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules." ! PROPOSED: biological adhesion that OBO_REL:results_in_adhesion_to cell [cdef(GO:0022610, [OBO_REL:results_in_adhesion_to=ZFA:0009000])] [Term] id: GO:0007155 ! cell adhesion intersection_of: GO:0022610 ! biological adhesion intersection_of: OBO_REL:results_in_adhesion_to ZFA:0009000 ! cell ! seconds spent parsing GO:0007155: 37.3 ! No parse for: GO:0007157 heterophilic cell adhesion ! Already have xp for: GO:0007158 neuron adhesion ! CURRENT : biological adhesion that OBO_REL:results_in_adhesion_to neuron [cdef(GO:0022610, [OBO_REL:results_in_adhesion_to=CL:0000540])] ! Already have xp for: GO:0007159 leukocyte adhesion ! CURRENT : biological adhesion that OBO_REL:results_in_adhesion_to leukocyte [cdef(GO:0022610, [OBO_REL:results_in_adhesion_to=CL:0000738])] ! No parse for: GO:0007160 cell-matrix adhesion ! Already have xp for: GO:0007162 negative regulation of cell adhesion ! CURRENT : biological regulation that OBO_REL:negatively_regulates cell adhesion and regulates cell adhesion [cdef(GO:0065007, [OBO_REL:negatively_regulates=GO:0007155, regulates=GO:0007155])] ! No parse for: GO:0007166 cell surface receptor linked signal transduction ! No parse for: GO:0007169 transmembrane receptor protein tyrosine kinase signaling pathway ! No parse for: GO:0007171 transmembrane receptor protein tyrosine kinase activation (dimerization) ! No parse for: GO:0007173 epidermal growth factor receptor signaling pathway ! No parse for: GO:0007174 epidermal growth factor ligand processing ! No parse for: GO:0007175 negative regulation of epidermal growth factor receptor activity ! No parse for: GO:0007178 transmembrane receptor protein serine/threonine kinase signaling pathway ! No parse for: GO:0007179 transforming growth factor beta receptor signaling pathway ! No parse for: GO:0007181 transforming growth factor beta receptor complex assembly ! No parse for: GO:0007182 common-partner SMAD protein phosphorylation ! No parse for: GO:0007185 transmembrane receptor protein tyrosine phosphatase signaling pathway ! No parse for: GO:0007204 elevation of cytosolic calcium ion concentration ! No parse for: GO:0007209 tachykinin receptor, phospholipase C activating pathway ! No parse for: GO:0007217 tachykinin signaling pathway ! No parse for: GO:0007225 patched ligand processing ! No parse for: GO:0007242 intracellular signaling cascade ! No parse for: GO:0007253 cytoplasmic sequestering of NF-kappaB ! No parse for: GO:0007254 JNK cascade ! parse: GO:0007267 using "cell-cell signaling" => cdef(GO:0007165, [OBO_REL:has_agent=CL:0000000, OBO_REL:has_agent=CL:0000000]) [-3] ! parse: GO:0007267 using "cell-cell signaling" => cdef(GO:0007165, [OBO_REL:has_agent=CL:0000000, OBO_REL:has_agent=ZFA:0009000]) [-3] ! parse: GO:0007267 using "cell-cell signaling" => cdef(GO:0007165, [OBO_REL:has_agent=ZFA:0009000, OBO_REL:has_agent=CL:0000000]) [-3] ! parse: GO:0007267 using "cell-cell signaling" => cdef(GO:0007165, [OBO_REL:has_agent=ZFA:0009000, OBO_REL:has_agent=ZFA:0009000]) [-3] ! parse: GO:0007267 using "cell-cell signalling" => cdef(GO:0007165, [OBO_REL:has_agent=CL:0000000, OBO_REL:has_agent=CL:0000000]) [-3] ! parse: GO:0007267 using "cell-cell signalling" => cdef(GO:0007165, [OBO_REL:has_agent=CL:0000000, OBO_REL:has_agent=ZFA:0009000]) [-3] ! parse: GO:0007267 using "cell-cell signalling" => cdef(GO:0007165, [OBO_REL:has_agent=ZFA:0009000, OBO_REL:has_agent=CL:0000000]) [-3] ! parse: GO:0007267 using "cell-cell signalling" => cdef(GO:0007165, [OBO_REL:has_agent=ZFA:0009000, OBO_REL:has_agent=ZFA:0009000]) [-3] ! no existing xp def ! def: "Any process that mediates the transfer of information from one cell to another." ! PROPOSED: signal transduction that OBO_REL:has_agent cell and OBO_REL:has_agent cell [cdef(GO:0007165, [OBO_REL:has_agent=ZFA:0009000, OBO_REL:has_agent=ZFA:0009000])] [Term] id: GO:0007267 ! cell-cell signaling intersection_of: GO:0007165 ! signal transduction intersection_of: OBO_REL:has_agent ZFA:0009000 ! cell intersection_of: OBO_REL:has_agent ZFA:0009000 ! cell ! seconds spent parsing GO:0007267: 24.81 ! parse: GO:0007270 using "nerve-nerve synaptic transmission" => cdef(GO:0007268, [OBO_REL:has_agent=FBbt:00005105, OBO_REL:has_agent=FBbt:00005105]) [-3] ! parse: GO:0007270 using "nerve-nerve synaptic transmission" => cdef(GO:0007268, [OBO_REL:has_agent=FBbt:00005105, OBO_REL:has_agent=MA:0000217]) [-3] ! parse: GO:0007270 using "nerve-nerve synaptic transmission" => cdef(GO:0007268, [OBO_REL:has_agent=MA:0000217, OBO_REL:has_agent=FBbt:00005105]) [-3] ! parse: GO:0007270 using "nerve-nerve synaptic transmission" => cdef(GO:0007268, [OBO_REL:has_agent=MA:0000217, OBO_REL:has_agent=MA:0000217]) [-3] ! no existing xp def ! def: "The process of communication from a neuron to another neuron across a synapse." ! PROPOSED: synaptic transmission that OBO_REL:has_agent nerve and OBO_REL:has_agent nerve [cdef(GO:0007268, [OBO_REL:has_agent=MA:0000217, OBO_REL:has_agent=MA:0000217])] [Term] id: GO:0007270 ! nerve-nerve synaptic transmission intersection_of: GO:0007268 ! synaptic transmission intersection_of: OBO_REL:has_agent MA:0000217 ! nerve intersection_of: OBO_REL:has_agent MA:0000217 ! nerve ! seconds spent parsing GO:0007270: 10.23 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0007275 using "multicellular organismal development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(multicellular organismal, anatomy)]) [-25] ! no existing xp def ! def: "The biological process whose specific outcome is the progression of an organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult)." ! PROPOSED: developmental process that results_in_complete_developmental_of anon(multicellular organismal, anatomy) [cdef(GO:0032502, [results_in_complete_developmental_of=anon(multicellular organismal, anatomy)])] [Term] id: GO:0007275 ! multicellular organismal development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of anatomy:multicellular_organismal ! seconds spent parsing GO:0007275: 4.08 ! Already have xp for: GO:0007276 gamete generation ! CURRENT : biological_process that OBO_REL:results_in_creation_of gamete [cdef(GO:0008150, [OBO_REL:results_in_creation_of=CL:0000300])] ! Already have xp for: GO:0007277 pole cell development ! CURRENT : developmental process that OBO_REL:results_in_developmental_progression_of pole cell [cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=CL:0000301])] ! Already have xp for: GO:0007278 pole cell fate determination ! CURRENT : cell fate determination that OBO_REL:results_in_determination_to pole cell [cdef(GO:0001709, [OBO_REL:results_in_determination_to=CL:0000301])] ! Already have xp for: GO:0007279 pole cell formation ! CURRENT : biosynthetic process that OBO_REL:results_in_creation_of pole cell [cdef(GO:0009058, [OBO_REL:results_in_creation_of=CL:0000301])] ! Already have xp for: GO:0007280 pole cell migration ! CURRENT : cell migration that OBO_REL:results_in_movement_of pole cell [cdef(GO:0016477, [OBO_REL:results_in_movement_of=CL:0000301])] ! Already have xp for: GO:0007281 germ cell development ! CURRENT : developmental process that OBO_REL:results_in_developmental_progression_of germ cell [cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=CL:0000586])] ! Already have xp for: GO:0007282 cystoblast division ! CURRENT : cell division that OBO_REL:results_in_division_of cystoblast [cdef(GO:0051301, [OBO_REL:results_in_division_of=CL:0000722])] ! No parse for: GO:0007283 spermatogenesis ! Already have xp for: GO:0007284 spermatogonial cell division ! CURRENT : cell division that OBO_REL:results_in_division_of spermatogonial [cdef(GO:0051301, [OBO_REL:results_in_division_of=cell:spermatogonial])] ! Already have xp for: GO:0007285 primary spermatocyte growth ! CURRENT : growth that OBO_REL:results_in_increase_in_mass_of primary spermatocyte [cdef(GO:0040007, [OBO_REL:results_in_increase_in_mass_of=CL:0000656])] ! Already have xp for: GO:0007286 spermatid development ! CURRENT : developmental process that OBO_REL:results_in_developmental_progression_of spermatid [cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=CL:0000018])] ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0007287 using "Nebenkern formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=FBbt:00004943]) [-2] ! parse: GO:0007287 using "Nebenkern formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=GO:0016006]) [-2] ! parse: GO:0007287 using "Nebenkern formation" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0016006]) [-2] ! parse: GO:0007287 using "Nebenkern formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=FBbt:00004943]) [-2] ! parse: GO:0007287 using "Nebenkern formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0016006]) [-2] ! no existing xp def ! def: "Fusion of mitochondria during insect spermatid differentiation to form two masses, which wrap around each other to form a densely packed sphere called the Nebenkern." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of Nebenkern [cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0016006])] [Term] id: GO:0007287 ! Nebenkern formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of GO:0016006 ! Nebenkern synonym: "Nebenkern anatomical structure formation" EXACT [OBOL:automatic] synonym: "Nebenkern formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0007287: 7.22 ! parse: GO:0007288 using "sperm axoneme assembly" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0005930, OBO_REL:unfolds_in=CL:0000019]) [-3] ! parse: GO:0007288 using "sperm axoneme assembly" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0005930, OBO_REL:unfolds_in=FBbt:00004954]) [-3] ! parse: GO:0007288 using "sperm axoneme assembly" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0005930, OBO_REL:unfolds_in=ZFA:0009006]) [-3] ! no existing xp def ! def: "The assembly and organization of the sperm flagellar axoneme, the bundle of microtubules and associated proteins that forms the core of the eukaryotic sperm flagellum, and is responsible for movement." ! PROPOSED: cellular component assembly that OBO_REL:results_in_creation_of axoneme and OBO_REL:unfolds_in sperm [cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0005930, OBO_REL:unfolds_in=ZFA:0009006])] [Term] id: GO:0007288 ! sperm axoneme assembly intersection_of: GO:0022607 ! cellular component assembly intersection_of: OBO_REL:results_in_creation_of GO:0005930 ! axoneme intersection_of: OBO_REL:unfolds_in ZFA:0009006 ! sperm synonym: "sperm cell assembly and maintenance of axonemal motor activity" EXACT [OBOL:automatic] synonym: "sperm cell assembly and maintenance of axoneme" EXACT [OBOL:automatic] synonym: "sperm cell assembly of axonemal motor activity" EXACT [OBOL:automatic] synonym: "sperm cell assembly of axoneme" EXACT [OBOL:automatic] synonym: "sperm cell axonemal motor activity assembly" EXACT [OBOL:automatic] synonym: "sperm cell axonemal motor activity assembly and maintenance" EXACT [OBOL:automatic] synonym: "sperm cell axonemal motor activity biogenesis" EXACT [OBOL:automatic] synonym: "sperm cell axonemal motor activity biogenesis and assembly" EXACT [OBOL:automatic] synonym: "sperm cell axonemal motor activity cell structure assembly" EXACT [OBOL:automatic] synonym: "sperm cell axonemal motor activity cellular component assembly" EXACT [OBOL:automatic] synonym: "sperm cell axonemal motor activity complex assembly" EXACT [OBOL:automatic] synonym: "sperm cell axonemal motor activity formation" EXACT [OBOL:automatic] synonym: "sperm cell axoneme assembly" EXACT [OBOL:automatic] synonym: "sperm cell axoneme assembly and maintenance" EXACT [OBOL:automatic] synonym: "sperm cell axoneme biogenesis" EXACT [OBOL:automatic] synonym: "sperm cell axoneme biogenesis and assembly" EXACT [OBOL:automatic] synonym: "sperm cell axoneme cell structure assembly" EXACT [OBOL:automatic] synonym: "sperm cell axoneme cellular component assembly" EXACT [OBOL:automatic] synonym: "sperm cell axoneme complex assembly" EXACT [OBOL:automatic] synonym: "sperm cell axoneme formation" EXACT [OBOL:automatic] synonym: "sperm cell biogenesis and assembly of axonemal motor activity" EXACT [OBOL:automatic] synonym: "sperm cell biogenesis and assembly of axoneme" EXACT [OBOL:automatic] synonym: "sperm cell biogenesis of axonemal motor activity" EXACT [OBOL:automatic] synonym: "sperm cell biogenesis of axoneme" EXACT [OBOL:automatic] synonym: "sperm cell cell structure assembly of axonemal motor activity" EXACT [OBOL:automatic] synonym: "sperm cell cell structure assembly of axoneme" EXACT [OBOL:automatic] synonym: "sperm cell cellular component assembly of axonemal motor activity" EXACT [OBOL:automatic] synonym: "sperm cell cellular component assembly of axoneme" EXACT [OBOL:automatic] synonym: "sperm cell complex assembly of axonemal motor activity" EXACT [OBOL:automatic] synonym: "sperm cell complex assembly of axoneme" EXACT [OBOL:automatic] synonym: "sperm cell formation of axonemal motor activity" EXACT [OBOL:automatic] synonym: "sperm cell formation of axoneme" EXACT [OBOL:automatic] synonym: "spermatozoid assembly and maintenance of axonemal motor activity" EXACT [OBOL:automatic] synonym: "spermatozoid assembly and maintenance of axoneme" EXACT [OBOL:automatic] synonym: "spermatozoid assembly of axonemal motor activity" EXACT [OBOL:automatic] synonym: "spermatozoid assembly of axoneme" EXACT [OBOL:automatic] synonym: "spermatozoid axonemal motor activity assembly" EXACT [OBOL:automatic] synonym: "spermatozoid axonemal motor activity assembly and maintenance" EXACT [OBOL:automatic] synonym: "spermatozoid axonemal motor activity biogenesis" EXACT [OBOL:automatic] synonym: "spermatozoid axonemal motor activity biogenesis and assembly" EXACT [OBOL:automatic] synonym: "spermatozoid axonemal motor activity cell structure assembly" EXACT [OBOL:automatic] synonym: "spermatozoid axonemal motor activity cellular component assembly" EXACT [OBOL:automatic] synonym: "spermatozoid axonemal motor activity complex assembly" EXACT [OBOL:automatic] synonym: "spermatozoid axonemal motor activity formation" EXACT [OBOL:automatic] synonym: "spermatozoid axoneme assembly" EXACT [OBOL:automatic] synonym: "spermatozoid axoneme assembly and maintenance" EXACT [OBOL:automatic] synonym: "spermatozoid axoneme biogenesis" EXACT [OBOL:automatic] synonym: "spermatozoid axoneme biogenesis and assembly" EXACT [OBOL:automatic] synonym: "spermatozoid axoneme cell structure assembly" EXACT [OBOL:automatic] synonym: "spermatozoid axoneme cellular component assembly" EXACT [OBOL:automatic] synonym: "spermatozoid axoneme complex assembly" EXACT [OBOL:automatic] synonym: "spermatozoid axoneme formation" EXACT [OBOL:automatic] synonym: "spermatozoid biogenesis and assembly of axonemal motor activity" EXACT [OBOL:automatic] synonym: "spermatozoid biogenesis and assembly of axoneme" EXACT [OBOL:automatic] synonym: "spermatozoid biogenesis of axonemal motor activity" EXACT [OBOL:automatic] synonym: "spermatozoid biogenesis of axoneme" EXACT [OBOL:automatic] synonym: "spermatozoid cell structure assembly of axonemal motor activity" EXACT [OBOL:automatic] synonym: "spermatozoid cell structure assembly of axoneme" EXACT [OBOL:automatic] synonym: "spermatozoid cellular component assembly of axonemal motor activity" EXACT [OBOL:automatic] synonym: "spermatozoid cellular component assembly of axoneme" EXACT [OBOL:automatic] synonym: "spermatozoid complex assembly of axonemal motor activity" EXACT [OBOL:automatic] synonym: "spermatozoid complex assembly of axoneme" EXACT [OBOL:automatic] synonym: "spermatozoid formation of axonemal motor activity" EXACT [OBOL:automatic] synonym: "spermatozoid formation of axoneme" EXACT [OBOL:automatic] synonym: "spermatozoon assembly and maintenance of axonemal motor activity" EXACT [OBOL:automatic] synonym: "spermatozoon assembly and maintenance of axoneme" EXACT [OBOL:automatic] synonym: "spermatozoon assembly of axonemal motor activity" EXACT [OBOL:automatic] synonym: "spermatozoon assembly of axoneme" EXACT [OBOL:automatic] synonym: "spermatozoon axonemal motor activity assembly" EXACT [OBOL:automatic] synonym: "spermatozoon axonemal motor activity assembly and maintenance" EXACT [OBOL:automatic] synonym: "spermatozoon axonemal motor activity biogenesis" EXACT [OBOL:automatic] synonym: "spermatozoon axonemal motor activity biogenesis and assembly" EXACT [OBOL:automatic] synonym: "spermatozoon axonemal motor activity cell structure assembly" EXACT [OBOL:automatic] synonym: "spermatozoon axonemal motor activity cellular component assembly" EXACT [OBOL:automatic] synonym: "spermatozoon axonemal motor activity complex assembly" EXACT [OBOL:automatic] synonym: "spermatozoon axonemal motor activity formation" EXACT [OBOL:automatic] synonym: "spermatozoon axoneme assembly" EXACT [OBOL:automatic] synonym: "spermatozoon axoneme assembly and maintenance" EXACT [OBOL:automatic] synonym: "spermatozoon axoneme biogenesis" EXACT [OBOL:automatic] synonym: "spermatozoon axoneme biogenesis and assembly" EXACT [OBOL:automatic] synonym: "spermatozoon axoneme cell structure assembly" EXACT [OBOL:automatic] synonym: "spermatozoon axoneme cellular component assembly" EXACT [OBOL:automatic] synonym: "spermatozoon axoneme complex assembly" EXACT [OBOL:automatic] synonym: "spermatozoon axoneme formation" EXACT [OBOL:automatic] synonym: "spermatozoon biogenesis and assembly of axonemal motor activity" EXACT [OBOL:automatic] synonym: "spermatozoon biogenesis and assembly of axoneme" EXACT [OBOL:automatic] synonym: "spermatozoon biogenesis of axonemal motor activity" EXACT [OBOL:automatic] synonym: "spermatozoon biogenesis of axoneme" EXACT [OBOL:automatic] synonym: "spermatozoon cell structure assembly of axonemal motor activity" EXACT [OBOL:automatic] synonym: "spermatozoon cell structure assembly of axoneme" EXACT [OBOL:automatic] synonym: "spermatozoon cellular component assembly of axonemal motor activity" EXACT [OBOL:automatic] synonym: "spermatozoon cellular component assembly of axoneme" EXACT [OBOL:automatic] synonym: "spermatozoon complex assembly of axonemal motor activity" EXACT [OBOL:automatic] synonym: "spermatozoon complex assembly of axoneme" EXACT [OBOL:automatic] synonym: "spermatozoon formation of axonemal motor activity" EXACT [OBOL:automatic] synonym: "spermatozoon formation of axoneme" EXACT [OBOL:automatic] ! seconds spent parsing GO:0007288: 13.31 ! parse: GO:0007289 using "spermatid nuclear differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(nuclear, cell), OBO_REL:unfolds_in=CL:0000018]) [-9] ! parse: GO:0007289 using "spermatid nuclear differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(nuclear, cell), OBO_REL:unfolds_in=FBbt:00004942]) [-9] ! no existing xp def ! def: "The specialization of the spermatid nucleus during the development of a spermatid into a mature male gamete competent for fertilization." ! PROPOSED: cell differentiation that OBO_REL:results_in_acquisition_of_features_of anon(nuclear, cell) and OBO_REL:unfolds_in spermatid [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(nuclear, cell), OBO_REL:unfolds_in=FBbt:00004942])] [Term] id: GO:0007289 ! spermatid nuclear differentiation intersection_of: GO:0030154 ! cell differentiation intersection_of: OBO_REL:results_in_acquisition_of_features_of cell:nuclear intersection_of: OBO_REL:unfolds_in FBbt:00004942 ! spermatid ! seconds spent parsing GO:0007289: 9.26 ! No parse for: GO:0007290 spermatid nuclear elongation ! No parse for: GO:0007291 sperm individualization ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0007293 using "germarium-derived egg chamber formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=FBbt:00004894, OBO_REL:unfolds_in=cell:germarium_-_derived]) [-3] ! parse: GO:0007293 using "germarium-derived egg chamber formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=cell:germarium_-_derived_egg_chamber]) [-2] ! parse: GO:0007293 using "germarium-derived egg chamber formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=cdef(FBbt:00004866, [OBO_REL:derives_from=FBbt:00004894])]) [-3] ! parse: GO:0007293 using "germarium-derived egg chamber formation" => cdef(GO:0048646, [and=OBO_REL:results_in_formation_of(anon(chamber, anatomy))/unfolds_in(CL:0000025), OBO_REL:unfolds_in=cell:germarium_-_derived]) [-3] ! parse: GO:0007293 using "germarium-derived egg chamber formation" => cdef(GO:0048646, [and=OBO_REL:results_in_formation_of(anon(chamber, anatomy))/unfolds_in(FBbt:00000034), OBO_REL:unfolds_in=cell:germarium_-_derived]) [-3] ! parse: GO:0007293 using "germarium-derived egg chamber formation" => cdef(GO:0048646, [and=OBO_REL:results_in_formation_of(anon(chamber, anatomy))/unfolds_in(ZFA:0001109), OBO_REL:unfolds_in=cell:germarium_-_derived]) [-3] ! parse: GO:0007293 using "germarium-derived egg chamber formation" => cdef(GO:0048646, [and=OBO_REL:results_in_formation_of(anon(chamber, anatomy))/unfolds_in(ZFA:0009008), OBO_REL:unfolds_in=cell:germarium_-_derived]) [-3] ! parse: GO:0007293 using "germarium-derived egg chamber formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=FBbt:00004894, OBO_REL:unfolds_in=cell:germarium_-_derived]) [-3] ! parse: GO:0007293 using "germarium-derived egg chamber formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=cell:germarium_-_derived_egg_chamber]) [-2] ! parse: GO:0007293 using "germarium-derived egg chamber formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(- derived egg chamber, anatomy), OBO_REL:unfolds_in=FBbt:00004866]) [-23] ! parse: GO:0007293 using "germarium-derived egg chamber formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(chamber, anatomy), OBO_REL:unfolds_in=cdef(CL:0000025, [OBO_REL:derives_from=FBbt:00004866])]) [-10] ! parse: GO:0007293 using "germarium-derived egg chamber formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(chamber, anatomy), OBO_REL:unfolds_in=cdef(FBbt:00004866, [OBO_REL:derives_from=CL:0000025])]) [-10] ! parse: GO:0007293 using "germarium-derived egg chamber formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(chamber, anatomy), OBO_REL:unfolds_in=cdef(FBbt:00004866, [OBO_REL:derives_from=FBbt:00000034])]) [-10] ! parse: GO:0007293 using "germarium-derived egg chamber formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(chamber, anatomy), OBO_REL:unfolds_in=cdef(FBbt:00004866, [OBO_REL:derives_from=ZFA:0001109])]) [-10] ! parse: GO:0007293 using "germarium-derived egg chamber formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(chamber, anatomy), OBO_REL:unfolds_in=cdef(FBbt:00004866, [OBO_REL:derives_from=ZFA:0009008])]) [-10] ! parse: GO:0007293 using "germarium-derived egg chamber formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=cdef(FBbt:00004866, [OBO_REL:derives_from=FBbt:00004894])]) [-3] ! no existing xp def ! def: "Construction of a stage-1 egg chamber in the anterior part of the germarium, from the progeny of germ-line and somatic stem cells." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of germarium-derived egg chamber [cdef(GO:0048646, [OBO_REL:results_in_formation_of=cell:germarium_-_derived_egg_chamber])] [Term] id: GO:0007293 ! germarium-derived egg chamber formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of cell:germarium_-_derived_egg_chamber ! germarium-derived egg chamber synonym: "germarium-derived egg chamber anatomical structure formation" EXACT [OBOL:automatic] synonym: "germarium-derived egg chamber formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0007293: 50.52 ! Already have xp for: GO:0007294 germarium-derived oocyte fate determination ! CURRENT : oocyte fate determination that OBO_REL:results_in_determination_to germarium-derived [cdef(GO:0030716, [OBO_REL:results_in_determination_to=cell:germarium_-_derived])] ! No parse for: GO:0007295 growth of a germarium-derived egg chamber ! No parse for: GO:0007297 follicle cell migration (sensu Insecta) ! No parse for: GO:0007298 border follicle cell migration (sensu Insecta) ! No parse for: GO:0007299 follicle cell adhesion (sensu Insecta) ! Already have xp for: GO:0007300 ovarian nurse cell to oocyte transport ! CURRENT : transport that OBO_REL:results_in_transport_from ovarian nurse cell and OBO_REL:results_in_transport_to oocyte [cdef(GO:0006810, [OBO_REL:results_in_transport_from=cell:ovarian_nurse_cell, OBO_REL:results_in_transport_to=CL:0000023])] ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0007301 using "ovarian ring canal formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(ovarian ring canal, anatomy)]) [-19] ! no existing xp def ! def: "Assembly of the intercellular bridges that connect the germ-line cells of a female cyst." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of anon(ovarian ring canal, anatomy) [cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(ovarian ring canal, anatomy)])] [Term] id: GO:0007301 ! ovarian ring canal formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of anatomy:ovarian_ring_canal synonym: "ovarian ring canal anatomical structure formation" EXACT [OBOL:automatic] synonym: "ovarian ring canal formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0007301: 4.43 ! Already have xp for: GO:0007302 nurse cell nucleus anchoring ! CURRENT : biological_process that OBO_REL:results_in_attachment_of nurse cell and OBO_REL:results_in_attachment_of nucleus [cdef(GO:0008150, [OBO_REL:results_in_attachment_of=CL:0000026, OBO_REL:results_in_attachment_of=GO:0005634])] ! parse: GO:0007303 using "cytoplasmic transport, nurse cell to oocyte" => cdef(GO:0016482, [OBO_REL:results_in_transport_from=CL:0000026, OBO_REL:results_in_transport_to=CL:0000023]) [-3] ! parse: GO:0007303 using "cytoplasmic transport, nurse cell to oocyte" => cdef(GO:0016482, [OBO_REL:results_in_transport_from=CL:0000026, OBO_REL:results_in_transport_to=FBbt:00004886]) [-3] ! parse: GO:0007303 using "cytoplasmic transport, nurse cell to oocyte" => cdef(GO:0016482, [OBO_REL:results_in_transport_from=CL:0000026, OBO_REL:results_in_transport_to=MA:0000388]) [-3] ! parse: GO:0007303 using "cytoplasmic transport, nurse cell to oocyte" => cdef(GO:0016482, [OBO_REL:results_in_transport_from=CL:0000026, OBO_REL:results_in_transport_to=ZFA:0001109]) [-3] ! parse: GO:0007303 using "cytoplasmic transport, nurse cell to oocyte" => cdef(GO:0016482, [OBO_REL:results_in_transport_from=FBbt:00004878, OBO_REL:results_in_transport_to=CL:0000023]) [-3] ! parse: GO:0007303 using "cytoplasmic transport, nurse cell to oocyte" => cdef(GO:0016482, [OBO_REL:results_in_transport_from=FBbt:00004878, OBO_REL:results_in_transport_to=FBbt:00004886]) [-3] ! parse: GO:0007303 using "cytoplasmic transport, nurse cell to oocyte" => cdef(GO:0016482, [OBO_REL:results_in_transport_from=FBbt:00004878, OBO_REL:results_in_transport_to=MA:0000388]) [-3] ! parse: GO:0007303 using "cytoplasmic transport, nurse cell to oocyte" => cdef(GO:0016482, [OBO_REL:results_in_transport_from=FBbt:00004878, OBO_REL:results_in_transport_to=ZFA:0001109]) [-3] ! no existing xp def ! def: "The directed movement of cytoplasmic constituents synthesized in the nurse cells to the oocyte." ! PROPOSED: cytoplasmic transport that OBO_REL:results_in_transport_from nurse cell and OBO_REL:results_in_transport_to oocyte [cdef(GO:0016482, [OBO_REL:results_in_transport_from=FBbt:00004878, OBO_REL:results_in_transport_to=ZFA:0001109])] [Term] id: GO:0007303 ! cytoplasmic transport, nurse cell to oocyte intersection_of: GO:0016482 ! cytoplasmic transport intersection_of: OBO_REL:results_in_transport_from FBbt:00004878 ! nurse cell intersection_of: OBO_REL:results_in_transport_to ZFA:0001109 ! oocyte synonym: "cytoplasmic transport, nurse cell to oocyte" EXACT [OBOL:automatic] ! seconds spent parsing GO:0007303: 29.06 ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0007304 using "chorion-containing eggshell formation" => cdef(GO:0030703, [OBO_REL:results_in_developmental_progression_of=anon(- containing, anatomy), OBO_REL:unfolds_in=FBbt:00000038]) [-14] ! parse: GO:0007304 using "chorion-containing eggshell formation" => cdef(GO:0030703, [OBO_REL:results_in_developmental_progression_of=anon(- containing, anatomy), OBO_REL:unfolds_in=GO:0042600]) [-14] ! parse: GO:0007304 using "chorion-containing eggshell formation" => cdef(GO:0030703, [OBO_REL:results_in_developmental_progression_of=anon(- containing, anatomy), OBO_REL:unfolds_in=ZFA:0000329]) [-14] ! parse: GO:0007304 using "chorion-containing eggshell formation" => cdef(GO:0030703, [OBO_REL:results_in_formation_of=anon(- containing, anatomy), OBO_REL:unfolds_in=FBbt:00000038]) [-14] ! parse: GO:0007304 using "chorion-containing eggshell formation" => cdef(GO:0030703, [OBO_REL:results_in_formation_of=anon(- containing, anatomy), OBO_REL:unfolds_in=GO:0042600]) [-14] ! parse: GO:0007304 using "chorion-containing eggshell formation" => cdef(GO:0030703, [OBO_REL:results_in_formation_of=anon(- containing, anatomy), OBO_REL:unfolds_in=ZFA:0000329]) [-14] ! parse: GO:0007304 using "chorion-containing eggshell formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(- containing eggshell, anatomy), OBO_REL:unfolds_in=FBbt:00000038]) [-23] ! parse: GO:0007304 using "chorion-containing eggshell formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(- containing eggshell, anatomy), OBO_REL:unfolds_in=GO:0042600]) [-23] ! parse: GO:0007304 using "chorion-containing eggshell formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(- containing eggshell, anatomy), OBO_REL:unfolds_in=ZFA:0000329]) [-23] ! no existing xp def ! def: "The construction of a chorion-containing eggshell." ! PROPOSED: eggshell formation that OBO_REL:results_in_formation_of anon(- containing, anatomy) and OBO_REL:unfolds_in chorion [cdef(GO:0030703, [OBO_REL:results_in_formation_of=anon(- containing, anatomy), OBO_REL:unfolds_in=ZFA:0000329])] [Term] id: GO:0007304 ! chorion-containing eggshell formation intersection_of: GO:0030703 ! eggshell formation intersection_of: OBO_REL:results_in_formation_of anatomy:-_containing intersection_of: OBO_REL:unfolds_in ZFA:0000329 ! chorion ! seconds spent parsing GO:0007304: 16.19 ! No parse for: GO:0007305 vitelline membrane formation in chorion-containing eggshell ! No parse for: GO:0007308 oocyte construction ! Already have xp for: GO:0007309 oocyte axis determination ! CURRENT : axis specification that OBO_REL:results_in_patterning_for oocyte [cdef(GO:0009798, [OBO_REL:results_in_patterning_for=CL:0000023])] ! parse: GO:0007310 using "oocyte dorsal/ventral axis determination" => cdef(GO:0009798, [OBO_REL:results_in_developmental_progression_of=anon(dorsal/ventral, anatomy), OBO_REL:unfolds_in=CL:0000023]) [-16] ! parse: GO:0007310 using "oocyte dorsal/ventral axis determination" => cdef(GO:0009798, [OBO_REL:results_in_developmental_progression_of=anon(dorsal/ventral, anatomy), OBO_REL:unfolds_in=FBbt:00004886]) [-16] ! parse: GO:0007310 using "oocyte dorsal/ventral axis determination" => cdef(GO:0009798, [OBO_REL:results_in_developmental_progression_of=anon(dorsal/ventral, anatomy), OBO_REL:unfolds_in=MA:0000388]) [-16] ! parse: GO:0007310 using "oocyte dorsal/ventral axis determination" => cdef(GO:0009798, [OBO_REL:results_in_developmental_progression_of=anon(dorsal/ventral, anatomy), OBO_REL:unfolds_in=ZFA:0001109]) [-16] ! no existing xp def ! def: "The establishment, maintenance and elaboration of the dorsal/ventral axis of the oocyte." ! PROPOSED: axis specification that OBO_REL:results_in_developmental_progression_of anon(dorsal/ventral, anatomy) and OBO_REL:unfolds_in oocyte [cdef(GO:0009798, [OBO_REL:results_in_developmental_progression_of=anon(dorsal/ventral, anatomy), OBO_REL:unfolds_in=ZFA:0001109])] [Term] id: GO:0007310 ! oocyte dorsal/ventral axis determination intersection_of: GO:0009798 ! axis specification intersection_of: OBO_REL:results_in_developmental_progression_of anatomy:dorsal_/_ventral intersection_of: OBO_REL:unfolds_in ZFA:0001109 ! oocyte synonym: "ovarian follicle stage V dorsal/ventral axis determination" EXACT [OBOL:automatic] synonym: "ovarian follicle stage V dorsal/ventral axis specification" EXACT [OBOL:automatic] ! seconds spent parsing GO:0007310: 31.76 ! parse: GO:0007312 using "oocyte nuclear migration during oocyte axis determination" => cdef(GO:0007097, [OBO_REL:part_of=GO:0007309, OBO_REL:unfolds_in=CL:0000023]) [-3] ! parse: GO:0007312 using "oocyte nuclear migration during oocyte axis determination" => cdef(GO:0007097, [OBO_REL:part_of=GO:0007309, OBO_REL:unfolds_in=FBbt:00004886]) [-3] ! parse: GO:0007312 using "oocyte nuclear migration during oocyte axis determination" => cdef(GO:0007097, [OBO_REL:part_of=GO:0007309, OBO_REL:unfolds_in=MA:0000388]) [-3] ! parse: GO:0007312 using "oocyte nuclear migration during oocyte axis determination" => cdef(GO:0007097, [OBO_REL:part_of=GO:0007309, OBO_REL:unfolds_in=ZFA:0001109]) [-3] ! parse: GO:0007312 using "oocyte nuclear migration during oocyte axis determination" => cdef(GO:0007097, [OBO_REL:part_of=cdef(GO:0009798, [OBO_REL:results_in_developmental_progression_of=CL:0000023]), OBO_REL:unfolds_in=CL:0000023]) [-4] ! parse: GO:0007312 using "oocyte nuclear migration during oocyte axis determination" => cdef(GO:0007097, [OBO_REL:part_of=cdef(GO:0009798, [OBO_REL:results_in_developmental_progression_of=CL:0000023]), OBO_REL:unfolds_in=FBbt:00004886]) [-4] ! parse: GO:0007312 using "oocyte nuclear migration during oocyte axis determination" => cdef(GO:0007097, [OBO_REL:part_of=cdef(GO:0009798, [OBO_REL:results_in_developmental_progression_of=CL:0000023]), OBO_REL:unfolds_in=MA:0000388]) [-4] ! parse: GO:0007312 using "oocyte nuclear migration during oocyte axis determination" => cdef(GO:0007097, [OBO_REL:part_of=cdef(GO:0009798, [OBO_REL:results_in_developmental_progression_of=CL:0000023]), OBO_REL:unfolds_in=ZFA:0001109]) [-4] ! parse: GO:0007312 using "oocyte nuclear migration during oocyte axis determination" => cdef(GO:0007097, [OBO_REL:part_of=cdef(GO:0009798, [OBO_REL:results_in_developmental_progression_of=FBbt:00004886]), OBO_REL:unfolds_in=CL:0000023]) [-4] ! parse: GO:0007312 using "oocyte nuclear migration during oocyte axis determination" => cdef(GO:0007097, [OBO_REL:part_of=cdef(GO:0009798, [OBO_REL:results_in_developmental_progression_of=FBbt:00004886]), OBO_REL:unfolds_in=FBbt:00004886]) [-4] ! parse: GO:0007312 using "oocyte nuclear migration during oocyte axis determination" => cdef(GO:0007097, [OBO_REL:part_of=cdef(GO:0009798, [OBO_REL:results_in_developmental_progression_of=FBbt:00004886]), OBO_REL:unfolds_in=MA:0000388]) [-4] ! parse: GO:0007312 using "oocyte nuclear migration during oocyte axis determination" => cdef(GO:0007097, [OBO_REL:part_of=cdef(GO:0009798, [OBO_REL:results_in_developmental_progression_of=FBbt:00004886]), OBO_REL:unfolds_in=ZFA:0001109]) [-4] ! parse: GO:0007312 using "oocyte nuclear migration during oocyte axis determination" => cdef(GO:0007097, [OBO_REL:part_of=cdef(GO:0009798, [OBO_REL:results_in_developmental_progression_of=MA:0000388]), OBO_REL:unfolds_in=CL:0000023]) [-4] ! parse: GO:0007312 using "oocyte nuclear migration during oocyte axis determination" => cdef(GO:0007097, [OBO_REL:part_of=cdef(GO:0009798, [OBO_REL:results_in_developmental_progression_of=MA:0000388]), OBO_REL:unfolds_in=FBbt:00004886]) [-4] ! parse: GO:0007312 using "oocyte nuclear migration during oocyte axis determination" => cdef(GO:0007097, [OBO_REL:part_of=cdef(GO:0009798, [OBO_REL:results_in_developmental_progression_of=MA:0000388]), OBO_REL:unfolds_in=MA:0000388]) [-4] ! parse: GO:0007312 using "oocyte nuclear migration during oocyte axis determination" => cdef(GO:0007097, [OBO_REL:part_of=cdef(GO:0009798, [OBO_REL:results_in_developmental_progression_of=MA:0000388]), OBO_REL:unfolds_in=ZFA:0001109]) [-4] ! parse: GO:0007312 using "oocyte nuclear migration during oocyte axis determination" => cdef(GO:0007097, [OBO_REL:part_of=cdef(GO:0009798, [OBO_REL:results_in_developmental_progression_of=ZFA:0001109]), OBO_REL:unfolds_in=CL:0000023]) [-4] ! parse: GO:0007312 using "oocyte nuclear migration during oocyte axis determination" => cdef(GO:0007097, [OBO_REL:part_of=cdef(GO:0009798, [OBO_REL:results_in_developmental_progression_of=ZFA:0001109]), OBO_REL:unfolds_in=FBbt:00004886]) [-4] ! parse: GO:0007312 using "oocyte nuclear migration during oocyte axis determination" => cdef(GO:0007097, [OBO_REL:part_of=cdef(GO:0009798, [OBO_REL:results_in_developmental_progression_of=ZFA:0001109]), OBO_REL:unfolds_in=MA:0000388]) [-4] ! parse: GO:0007312 using "oocyte nuclear migration during oocyte axis determination" => cdef(GO:0007097, [OBO_REL:part_of=cdef(GO:0009798, [OBO_REL:results_in_developmental_progression_of=ZFA:0001109]), OBO_REL:unfolds_in=ZFA:0001109]) [-4] ! parse: GO:0007312 using "oocyte nuclear migration during oocyte axis determination" => cdef(GO:0007097, [OBO_REL:part_of=cdef(GO:0009798, [OBO_REL:results_in_patterning_for=CL:0000023]), OBO_REL:unfolds_in=CL:0000023]) [-4] ! parse: GO:0007312 using "oocyte nuclear migration during oocyte axis determination" => cdef(GO:0007097, [OBO_REL:part_of=cdef(GO:0009798, [OBO_REL:results_in_patterning_for=CL:0000023]), OBO_REL:unfolds_in=FBbt:00004886]) [-4] ! parse: GO:0007312 using "oocyte nuclear migration during oocyte axis determination" => cdef(GO:0007097, [OBO_REL:part_of=cdef(GO:0009798, [OBO_REL:results_in_patterning_for=CL:0000023]), OBO_REL:unfolds_in=MA:0000388]) [-4] ! parse: GO:0007312 using "oocyte nuclear migration during oocyte axis determination" => cdef(GO:0007097, [OBO_REL:part_of=cdef(GO:0009798, [OBO_REL:results_in_patterning_for=CL:0000023]), OBO_REL:unfolds_in=ZFA:0001109]) [-4] ! parse: GO:0007312 using "oocyte nuclear migration during oocyte axis determination" => cdef(GO:0007097, [OBO_REL:part_of=cdef(GO:0009798, [OBO_REL:results_in_patterning_for=FBbt:00004886]), OBO_REL:unfolds_in=CL:0000023]) [-4] ! parse: GO:0007312 using "oocyte nuclear migration during oocyte axis determination" => cdef(GO:0007097, [OBO_REL:part_of=cdef(GO:0009798, [OBO_REL:results_in_patterning_for=FBbt:00004886]), OBO_REL:unfolds_in=FBbt:00004886]) [-4] ! parse: GO:0007312 using "oocyte nuclear migration during oocyte axis determination" => cdef(GO:0007097, [OBO_REL:part_of=cdef(GO:0009798, [OBO_REL:results_in_patterning_for=FBbt:00004886]), OBO_REL:unfolds_in=MA:0000388]) [-4] ! parse: GO:0007312 using "oocyte nuclear migration during oocyte axis determination" => cdef(GO:0007097, [OBO_REL:part_of=cdef(GO:0009798, [OBO_REL:results_in_patterning_for=FBbt:00004886]), OBO_REL:unfolds_in=ZFA:0001109]) [-4] ! parse: GO:0007312 using "oocyte nuclear migration during oocyte axis determination" => cdef(GO:0007097, [OBO_REL:part_of=cdef(GO:0009798, [OBO_REL:results_in_patterning_for=MA:0000388]), OBO_REL:unfolds_in=CL:0000023]) [-4] ! parse: GO:0007312 using "oocyte nuclear migration during oocyte axis determination" => cdef(GO:0007097, [OBO_REL:part_of=cdef(GO:0009798, [OBO_REL:results_in_patterning_for=MA:0000388]), OBO_REL:unfolds_in=FBbt:00004886]) [-4] ! parse: GO:0007312 using "oocyte nuclear migration during oocyte axis determination" => cdef(GO:0007097, [OBO_REL:part_of=cdef(GO:0009798, [OBO_REL:results_in_patterning_for=MA:0000388]), OBO_REL:unfolds_in=MA:0000388]) [-4] ! parse: GO:0007312 using "oocyte nuclear migration during oocyte axis determination" => cdef(GO:0007097, [OBO_REL:part_of=cdef(GO:0009798, [OBO_REL:results_in_patterning_for=MA:0000388]), OBO_REL:unfolds_in=ZFA:0001109]) [-4] ! parse: GO:0007312 using "oocyte nuclear migration during oocyte axis determination" => cdef(GO:0007097, [OBO_REL:part_of=cdef(GO:0009798, [OBO_REL:results_in_patterning_for=ZFA:0001109]), OBO_REL:unfolds_in=CL:0000023]) [-4] ! parse: GO:0007312 using "oocyte nuclear migration during oocyte axis determination" => cdef(GO:0007097, [OBO_REL:part_of=cdef(GO:0009798, [OBO_REL:results_in_patterning_for=ZFA:0001109]), OBO_REL:unfolds_in=FBbt:00004886]) [-4] ! parse: GO:0007312 using "oocyte nuclear migration during oocyte axis determination" => cdef(GO:0007097, [OBO_REL:part_of=cdef(GO:0009798, [OBO_REL:results_in_patterning_for=ZFA:0001109]), OBO_REL:unfolds_in=MA:0000388]) [-4] ! parse: GO:0007312 using "oocyte nuclear migration during oocyte axis determination" => cdef(GO:0007097, [OBO_REL:part_of=cdef(GO:0009798, [OBO_REL:results_in_patterning_for=ZFA:0001109]), OBO_REL:unfolds_in=ZFA:0001109]) [-4] ! parse: GO:0007312 using "oocyte nuclear migration during oocyte axis determination" => cdef(GO:0007097, [OBO_REL:part_of=cdef(GO:0009798, [OBO_REL:unfolds_in=CL:0000023]), OBO_REL:unfolds_in=CL:0000023]) [-4] ! parse: GO:0007312 using "oocyte nuclear migration during oocyte axis determination" => cdef(GO:0007097, [OBO_REL:part_of=cdef(GO:0009798, [OBO_REL:unfolds_in=CL:0000023]), OBO_REL:unfolds_in=FBbt:00004886]) [-4] ! parse: GO:0007312 using "oocyte nuclear migration during oocyte axis determination" => cdef(GO:0007097, [OBO_REL:part_of=cdef(GO:0009798, [OBO_REL:unfolds_in=CL:0000023]), OBO_REL:unfolds_in=MA:0000388]) [-4] ! parse: GO:0007312 using "oocyte nuclear migration during oocyte axis determination" => cdef(GO:0007097, [OBO_REL:part_of=cdef(GO:0009798, [OBO_REL:unfolds_in=CL:0000023]), OBO_REL:unfolds_in=ZFA:0001109]) [-4] ! parse: GO:0007312 using "oocyte nuclear migration during oocyte axis determination" => cdef(GO:0007097, [OBO_REL:part_of=cdef(GO:0009798, [OBO_REL:unfolds_in=FBbt:00004886]), OBO_REL:unfolds_in=CL:0000023]) [-4] ! parse: GO:0007312 using "oocyte nuclear migration during oocyte axis determination" => cdef(GO:0007097, [OBO_REL:part_of=cdef(GO:0009798, [OBO_REL:unfolds_in=FBbt:00004886]), OBO_REL:unfolds_in=FBbt:00004886]) [-4] ! parse: GO:0007312 using "oocyte nuclear migration during oocyte axis determination" => cdef(GO:0007097, [OBO_REL:part_of=cdef(GO:0009798, [OBO_REL:unfolds_in=FBbt:00004886]), OBO_REL:unfolds_in=MA:0000388]) [-4] ! parse: GO:0007312 using "oocyte nuclear migration during oocyte axis determination" => cdef(GO:0007097, [OBO_REL:part_of=cdef(GO:0009798, [OBO_REL:unfolds_in=FBbt:00004886]), OBO_REL:unfolds_in=ZFA:0001109]) [-4] ! parse: GO:0007312 using "oocyte nuclear migration during oocyte axis determination" => cdef(GO:0007097, [OBO_REL:part_of=cdef(GO:0009798, [OBO_REL:unfolds_in=MA:0000388]), OBO_REL:unfolds_in=CL:0000023]) [-4] ! parse: GO:0007312 using "oocyte nuclear migration during oocyte axis determination" => cdef(GO:0007097, [OBO_REL:part_of=cdef(GO:0009798, [OBO_REL:unfolds_in=MA:0000388]), OBO_REL:unfolds_in=FBbt:00004886]) [-4] ! parse: GO:0007312 using "oocyte nuclear migration during oocyte axis determination" => cdef(GO:0007097, [OBO_REL:part_of=cdef(GO:0009798, [OBO_REL:unfolds_in=MA:0000388]), OBO_REL:unfolds_in=MA:0000388]) [-4] ! parse: GO:0007312 using "oocyte nuclear migration during oocyte axis determination" => cdef(GO:0007097, [OBO_REL:part_of=cdef(GO:0009798, [OBO_REL:unfolds_in=MA:0000388]), OBO_REL:unfolds_in=ZFA:0001109]) [-4] ! parse: GO:0007312 using "oocyte nuclear migration during oocyte axis determination" => cdef(GO:0007097, [OBO_REL:part_of=cdef(GO:0009798, [OBO_REL:unfolds_in=ZFA:0001109]), OBO_REL:unfolds_in=CL:0000023]) [-4] ! parse: GO:0007312 using "oocyte nuclear migration during oocyte axis determination" => cdef(GO:0007097, [OBO_REL:part_of=cdef(GO:0009798, [OBO_REL:unfolds_in=ZFA:0001109]), OBO_REL:unfolds_in=FBbt:00004886]) [-4] ! parse: GO:0007312 using "oocyte nuclear migration during oocyte axis determination" => cdef(GO:0007097, [OBO_REL:part_of=cdef(GO:0009798, [OBO_REL:unfolds_in=ZFA:0001109]), OBO_REL:unfolds_in=MA:0000388]) [-4] ! parse: GO:0007312 using "oocyte nuclear migration during oocyte axis determination" => cdef(GO:0007097, [OBO_REL:part_of=cdef(GO:0009798, [OBO_REL:unfolds_in=ZFA:0001109]), OBO_REL:unfolds_in=ZFA:0001109]) [-4] ! parse: GO:0007312 using "oocyte nuclear migration during oocyte axis determination" => cdef(GO:0007309, [OBO_REL:results_in_developmental_progression_of=anon(nuclear migration during, anatomy), OBO_REL:unfolds_in=CL:0000023]) [-26] ! parse: GO:0007312 using "oocyte nuclear migration during oocyte axis determination" => cdef(GO:0007309, [OBO_REL:results_in_developmental_progression_of=anon(nuclear migration during, anatomy), OBO_REL:unfolds_in=FBbt:00004886]) [-26] ! parse: GO:0007312 using "oocyte nuclear migration during oocyte axis determination" => cdef(GO:0007309, [OBO_REL:results_in_developmental_progression_of=anon(nuclear migration during, anatomy), OBO_REL:unfolds_in=MA:0000388]) [-26] ! parse: GO:0007312 using "oocyte nuclear migration during oocyte axis determination" => cdef(GO:0007309, [OBO_REL:results_in_developmental_progression_of=anon(nuclear migration during, anatomy), OBO_REL:unfolds_in=ZFA:0001109]) [-26] ! parse: GO:0007312 using "oocyte nuclear migration during oocyte axis determination" => cdef(GO:0009798, [OBO_REL:results_in_developmental_progression_of=anon(nuclear migration during oocyte, anatomy), OBO_REL:unfolds_in=CL:0000023]) [-33] ! parse: GO:0007312 using "oocyte nuclear migration during oocyte axis determination" => cdef(GO:0009798, [OBO_REL:results_in_developmental_progression_of=anon(nuclear migration during oocyte, anatomy), OBO_REL:unfolds_in=FBbt:00004886]) [-33] ! parse: GO:0007312 using "oocyte nuclear migration during oocyte axis determination" => cdef(GO:0009798, [OBO_REL:results_in_developmental_progression_of=anon(nuclear migration during oocyte, anatomy), OBO_REL:unfolds_in=MA:0000388]) [-33] ! parse: GO:0007312 using "oocyte nuclear migration during oocyte axis determination" => cdef(GO:0009798, [OBO_REL:results_in_developmental_progression_of=anon(nuclear migration during oocyte, anatomy), OBO_REL:unfolds_in=ZFA:0001109]) [-33] ! parse: GO:0007312 using "oocyte nuclear migration during oocyte axis determination (sensu Insecta)" => cdef(GO:0007097, [OBO_REL:part_of=GO:0007309, OBO_REL:unfolds_in=CL:0000023]) [-3] ! parse: GO:0007312 using "oocyte nuclear migration during oocyte axis determination (sensu Insecta)" => cdef(GO:0007097, [OBO_REL:part_of=GO:0007309, OBO_REL:unfolds_in=FBbt:00004886]) [-3] ! parse: GO:0007312 using "oocyte nuclear migration during oocyte axis determination (sensu Insecta)" => cdef(GO:0007097, [OBO_REL:part_of=GO:0007309, OBO_REL:unfolds_in=MA:0000388]) [-3] ! parse: GO:0007312 using "oocyte nuclear migration during oocyte axis determination (sensu Insecta)" => cdef(GO:0007097, [OBO_REL:part_of=GO:0007309, OBO_REL:unfolds_in=ZFA:0001109]) [-3] ! parse: GO:0007312 using "oocyte nuclear migration during oocyte axis determination (sensu Insecta)" => cdef(GO:0007309, [OBO_REL:results_in_developmental_progression_of=anon(nuclear migration during, anatomy), OBO_REL:unfolds_in=CL:0000023]) [-26] ! parse: GO:0007312 using "oocyte nuclear migration during oocyte axis determination (sensu Insecta)" => cdef(GO:0007309, [OBO_REL:results_in_developmental_progression_of=anon(nuclear migration during, anatomy), OBO_REL:unfolds_in=FBbt:00004886]) [-26] ! parse: GO:0007312 using "oocyte nuclear migration during oocyte axis determination (sensu Insecta)" => cdef(GO:0007309, [OBO_REL:results_in_developmental_progression_of=anon(nuclear migration during, anatomy), OBO_REL:unfolds_in=MA:0000388]) [-26] ! parse: GO:0007312 using "oocyte nuclear migration during oocyte axis determination (sensu Insecta)" => cdef(GO:0007309, [OBO_REL:results_in_developmental_progression_of=anon(nuclear migration during, anatomy), OBO_REL:unfolds_in=ZFA:0001109]) [-26] ! parse: GO:0007312 using "oocyte nucleus migration during oocyte axis determination" => cdef(GO:0007097, [OBO_REL:part_of=GO:0007309, OBO_REL:unfolds_in=CL:0000023]) [-3] ! parse: GO:0007312 using "oocyte nucleus migration during oocyte axis determination" => cdef(GO:0007097, [OBO_REL:part_of=GO:0007309, OBO_REL:unfolds_in=FBbt:00004886]) [-3] ! parse: GO:0007312 using "oocyte nucleus migration during oocyte axis determination" => cdef(GO:0007097, [OBO_REL:part_of=GO:0007309, OBO_REL:unfolds_in=MA:0000388]) [-3] ! parse: GO:0007312 using "oocyte nucleus migration during oocyte axis determination" => cdef(GO:0007097, [OBO_REL:part_of=GO:0007309, OBO_REL:unfolds_in=ZFA:0001109]) [-3] ! parse: GO:0007312 using "oocyte nucleus migration during oocyte axis determination" => cdef(GO:0007097, [OBO_REL:part_of=cdef(GO:0009798, [OBO_REL:results_in_developmental_progression_of=CL:0000023]), OBO_REL:unfolds_in=CL:0000023]) [-4] ! parse: GO:0007312 using "oocyte nucleus migration during oocyte axis determination" => cdef(GO:0007097, [OBO_REL:part_of=cdef(GO:0009798, [OBO_REL:results_in_developmental_progression_of=CL:0000023]), OBO_REL:unfolds_in=FBbt:00004886]) [-4] ! parse: GO:0007312 using "oocyte nucleus migration during oocyte axis determination" => cdef(GO:0007097, [OBO_REL:part_of=cdef(GO:0009798, [OBO_REL:results_in_developmental_progression_of=CL:0000023]), OBO_REL:unfolds_in=MA:0000388]) [-4] ! parse: GO:0007312 using "oocyte nucleus migration during oocyte axis determination" => cdef(GO:0007097, [OBO_REL:part_of=cdef(GO:0009798, [OBO_REL:results_in_developmental_progression_of=CL:0000023]), OBO_REL:unfolds_in=ZFA:0001109]) [-4] ! parse: GO:0007312 using "oocyte nucleus migration during oocyte axis determination" => cdef(GO:0007097, [OBO_REL:part_of=cdef(GO:0009798, [OBO_REL:results_in_developmental_progression_of=FBbt:00004886]), OBO_REL:unfolds_in=CL:0000023]) [-4] ! parse: GO:0007312 using "oocyte nucleus migration during oocyte axis determination" => cdef(GO:0007097, [OBO_REL:part_of=cdef(GO:0009798, [OBO_REL:results_in_developmental_progression_of=FBbt:00004886]), OBO_REL:unfolds_in=FBbt:00004886]) [-4] ! parse: GO:0007312 using "oocyte nucleus migration during oocyte axis determination" => cdef(GO:0007097, [OBO_REL:part_of=cdef(GO:0009798, [OBO_REL:results_in_developmental_progression_of=FBbt:00004886]), OBO_REL:unfolds_in=MA:0000388]) [-4] ! parse: GO:0007312 using "oocyte nucleus migration during oocyte axis determination" => cdef(GO:0007097, [OBO_REL:part_of=cdef(GO:0009798, [OBO_REL:results_in_developmental_progression_of=FBbt:00004886]), OBO_REL:unfolds_in=ZFA:0001109]) [-4] ! parse: GO:0007312 using "oocyte nucleus migration during oocyte axis determination" => cdef(GO:0007097, [OBO_REL:part_of=cdef(GO:0009798, [OBO_REL:results_in_developmental_progression_of=MA:0000388]), OBO_REL:unfolds_in=CL:0000023]) [-4] ! parse: GO:0007312 using "oocyte nucleus migration during oocyte axis determination" => cdef(GO:0007097, [OBO_REL:part_of=cdef(GO:0009798, [OBO_REL:results_in_developmental_progression_of=MA:0000388]), OBO_REL:unfolds_in=FBbt:00004886]) [-4] ! parse: GO:0007312 using "oocyte nucleus migration during oocyte axis determination" => cdef(GO:0007097, [OBO_REL:part_of=cdef(GO:0009798, [OBO_REL:results_in_developmental_progression_of=MA:0000388]), OBO_REL:unfolds_in=MA:0000388]) [-4] ! parse: GO:0007312 using "oocyte nucleus migration during oocyte axis determination" => cdef(GO:0007097, [OBO_REL:part_of=cdef(GO:0009798, [OBO_REL:results_in_developmental_progression_of=MA:0000388]), OBO_REL:unfolds_in=ZFA:0001109]) [-4] ! parse: GO:0007312 using "oocyte nucleus migration during oocyte axis determination" => cdef(GO:0007097, [OBO_REL:part_of=cdef(GO:0009798, [OBO_REL:results_in_developmental_progression_of=ZFA:0001109]), OBO_REL:unfolds_in=CL:0000023]) [-4] ! parse: GO:0007312 using "oocyte nucleus migration during oocyte axis determination" => cdef(GO:0007097, [OBO_REL:part_of=cdef(GO:0009798, [OBO_REL:results_in_developmental_progression_of=ZFA:0001109]), OBO_REL:unfolds_in=FBbt:00004886]) [-4] ! parse: GO:0007312 using "oocyte nucleus migration during oocyte axis determination" => cdef(GO:0007097, [OBO_REL:part_of=cdef(GO:0009798, [OBO_REL:results_in_developmental_progression_of=ZFA:0001109]), OBO_REL:unfolds_in=MA:0000388]) [-4] ! parse: GO:0007312 using "oocyte nucleus migration during oocyte axis determination" => cdef(GO:0007097, [OBO_REL:part_of=cdef(GO:0009798, [OBO_REL:results_in_developmental_progression_of=ZFA:0001109]), OBO_REL:unfolds_in=ZFA:0001109]) [-4] ! parse: GO:0007312 using "oocyte nucleus migration during oocyte axis determination" => cdef(GO:0007097, [OBO_REL:part_of=cdef(GO:0009798, [OBO_REL:results_in_patterning_for=CL:0000023]), OBO_REL:unfolds_in=CL:0000023]) [-4] ! parse: GO:0007312 using "oocyte nucleus migration during oocyte axis determination" => cdef(GO:0007097, [OBO_REL:part_of=cdef(GO:0009798, [OBO_REL:results_in_patterning_for=CL:0000023]), OBO_REL:unfolds_in=FBbt:00004886]) [-4] ! parse: GO:0007312 using "oocyte nucleus migration during oocyte axis determination" => cdef(GO:0007097, [OBO_REL:part_of=cdef(GO:0009798, [OBO_REL:results_in_patterning_for=CL:0000023]), OBO_REL:unfolds_in=MA:0000388]) [-4] ! parse: GO:0007312 using "oocyte nucleus migration during oocyte axis determination" => cdef(GO:0007097, [OBO_REL:part_of=cdef(GO:0009798, [OBO_REL:results_in_patterning_for=CL:0000023]), OBO_REL:unfolds_in=ZFA:0001109]) [-4] ! parse: GO:0007312 using "oocyte nucleus migration during oocyte axis determination" => cdef(GO:0007097, [OBO_REL:part_of=cdef(GO:0009798, [OBO_REL:results_in_patterning_for=FBbt:00004886]), OBO_REL:unfolds_in=CL:0000023]) [-4] ! parse: GO:0007312 using "oocyte nucleus migration during oocyte axis determination" => cdef(GO:0007097, [OBO_REL:part_of=cdef(GO:0009798, [OBO_REL:results_in_patterning_for=FBbt:00004886]), OBO_REL:unfolds_in=FBbt:00004886]) [-4] ! parse: GO:0007312 using "oocyte nucleus migration during oocyte axis determination" => cdef(GO:0007097, [OBO_REL:part_of=cdef(GO:0009798, [OBO_REL:results_in_patterning_for=FBbt:00004886]), OBO_REL:unfolds_in=MA:0000388]) [-4] ! parse: GO:0007312 using "oocyte nucleus migration during oocyte axis determination" => cdef(GO:0007097, [OBO_REL:part_of=cdef(GO:0009798, [OBO_REL:results_in_patterning_for=FBbt:00004886]), OBO_REL:unfolds_in=ZFA:0001109]) [-4] ! parse: GO:0007312 using "oocyte nucleus migration during oocyte axis determination" => cdef(GO:0007097, [OBO_REL:part_of=cdef(GO:0009798, [OBO_REL:results_in_patterning_for=MA:0000388]), OBO_REL:unfolds_in=CL:0000023]) [-4] ! parse: GO:0007312 using "oocyte nucleus migration during oocyte axis determination" => cdef(GO:0007097, [OBO_REL:part_of=cdef(GO:0009798, [OBO_REL:results_in_patterning_for=MA:0000388]), OBO_REL:unfolds_in=FBbt:00004886]) [-4] ! parse: GO:0007312 using "oocyte nucleus migration during oocyte axis determination" => cdef(GO:0007097, [OBO_REL:part_of=cdef(GO:0009798, [OBO_REL:results_in_patterning_for=MA:0000388]), OBO_REL:unfolds_in=MA:0000388]) [-4] ! parse: GO:0007312 using "oocyte nucleus migration during oocyte axis determination" => cdef(GO:0007097, [OBO_REL:part_of=cdef(GO:0009798, [OBO_REL:results_in_patterning_for=MA:0000388]), OBO_REL:unfolds_in=ZFA:0001109]) [-4] ! parse: GO:0007312 using "oocyte nucleus migration during oocyte axis determination" => cdef(GO:0007097, [OBO_REL:part_of=cdef(GO:0009798, [OBO_REL:results_in_patterning_for=ZFA:0001109]), OBO_REL:unfolds_in=CL:0000023]) [-4] ! parse: GO:0007312 using "oocyte nucleus migration during oocyte axis determination" => cdef(GO:0007097, [OBO_REL:part_of=cdef(GO:0009798, [OBO_REL:results_in_patterning_for=ZFA:0001109]), OBO_REL:unfolds_in=FBbt:00004886]) [-4] ! parse: GO:0007312 using "oocyte nucleus migration during oocyte axis determination" => cdef(GO:0007097, [OBO_REL:part_of=cdef(GO:0009798, [OBO_REL:results_in_patterning_for=ZFA:0001109]), OBO_REL:unfolds_in=MA:0000388]) [-4] ! parse: GO:0007312 using "oocyte nucleus migration during oocyte axis determination" => cdef(GO:0007097, [OBO_REL:part_of=cdef(GO:0009798, [OBO_REL:results_in_patterning_for=ZFA:0001109]), OBO_REL:unfolds_in=ZFA:0001109]) [-4] ! parse: GO:0007312 using "oocyte nucleus migration during oocyte axis determination" => cdef(GO:0007097, [OBO_REL:part_of=cdef(GO:0009798, [OBO_REL:unfolds_in=CL:0000023]), OBO_REL:unfolds_in=CL:0000023]) [-4] ! parse: GO:0007312 using "oocyte nucleus migration during oocyte axis determination" => cdef(GO:0007097, [OBO_REL:part_of=cdef(GO:0009798, [OBO_REL:unfolds_in=CL:0000023]), OBO_REL:unfolds_in=FBbt:00004886]) [-4] ! parse: GO:0007312 using "oocyte nucleus migration during oocyte axis determination" => cdef(GO:0007097, [OBO_REL:part_of=cdef(GO:0009798, [OBO_REL:unfolds_in=CL:0000023]), OBO_REL:unfolds_in=MA:0000388]) [-4] ! parse: GO:0007312 using "oocyte nucleus migration during oocyte axis determination" => cdef(GO:0007097, [OBO_REL:part_of=cdef(GO:0009798, [OBO_REL:unfolds_in=CL:0000023]), OBO_REL:unfolds_in=ZFA:0001109]) [-4] ! parse: GO:0007312 using "oocyte nucleus migration during oocyte axis determination" => cdef(GO:0007097, [OBO_REL:part_of=cdef(GO:0009798, [OBO_REL:unfolds_in=FBbt:00004886]), OBO_REL:unfolds_in=CL:0000023]) [-4] ! parse: GO:0007312 using "oocyte nucleus migration during oocyte axis determination" => cdef(GO:0007097, [OBO_REL:part_of=cdef(GO:0009798, [OBO_REL:unfolds_in=FBbt:00004886]), OBO_REL:unfolds_in=FBbt:00004886]) [-4] ! parse: GO:0007312 using "oocyte nucleus migration during oocyte axis determination" => cdef(GO:0007097, [OBO_REL:part_of=cdef(GO:0009798, [OBO_REL:unfolds_in=FBbt:00004886]), OBO_REL:unfolds_in=MA:0000388]) [-4] ! parse: GO:0007312 using "oocyte nucleus migration during oocyte axis determination" => cdef(GO:0007097, [OBO_REL:part_of=cdef(GO:0009798, [OBO_REL:unfolds_in=FBbt:00004886]), OBO_REL:unfolds_in=ZFA:0001109]) [-4] ! parse: GO:0007312 using "oocyte nucleus migration during oocyte axis determination" => cdef(GO:0007097, [OBO_REL:part_of=cdef(GO:0009798, [OBO_REL:unfolds_in=MA:0000388]), OBO_REL:unfolds_in=CL:0000023]) [-4] ! parse: GO:0007312 using "oocyte nucleus migration during oocyte axis determination" => cdef(GO:0007097, [OBO_REL:part_of=cdef(GO:0009798, [OBO_REL:unfolds_in=MA:0000388]), OBO_REL:unfolds_in=FBbt:00004886]) [-4] ! parse: GO:0007312 using "oocyte nucleus migration during oocyte axis determination" => cdef(GO:0007097, [OBO_REL:part_of=cdef(GO:0009798, [OBO_REL:unfolds_in=MA:0000388]), OBO_REL:unfolds_in=MA:0000388]) [-4] ! parse: GO:0007312 using "oocyte nucleus migration during oocyte axis determination" => cdef(GO:0007097, [OBO_REL:part_of=cdef(GO:0009798, [OBO_REL:unfolds_in=MA:0000388]), OBO_REL:unfolds_in=ZFA:0001109]) [-4] ! parse: GO:0007312 using "oocyte nucleus migration during oocyte axis determination" => cdef(GO:0007097, [OBO_REL:part_of=cdef(GO:0009798, [OBO_REL:unfolds_in=ZFA:0001109]), OBO_REL:unfolds_in=CL:0000023]) [-4] ! parse: GO:0007312 using "oocyte nucleus migration during oocyte axis determination" => cdef(GO:0007097, [OBO_REL:part_of=cdef(GO:0009798, [OBO_REL:unfolds_in=ZFA:0001109]), OBO_REL:unfolds_in=FBbt:00004886]) [-4] ! parse: GO:0007312 using "oocyte nucleus migration during oocyte axis determination" => cdef(GO:0007097, [OBO_REL:part_of=cdef(GO:0009798, [OBO_REL:unfolds_in=ZFA:0001109]), OBO_REL:unfolds_in=MA:0000388]) [-4] ! parse: GO:0007312 using "oocyte nucleus migration during oocyte axis determination" => cdef(GO:0007097, [OBO_REL:part_of=cdef(GO:0009798, [OBO_REL:unfolds_in=ZFA:0001109]), OBO_REL:unfolds_in=ZFA:0001109]) [-4] ! parse: GO:0007312 using "oocyte nucleus migration during oocyte axis determination" => cdef(GO:0007309, [OBO_REL:results_in_developmental_progression_of=anon(migration during, anatomy), OBO_REL:unfolds_in=FBbt:00004888]) [-18] ! parse: GO:0007312 using "oocyte nucleus migration during oocyte axis determination" => cdef(GO:0007309, [and=results_in_developmental_progression_of(anon(migration during, anatomy))/unfolds_in(GO:0005634), OBO_REL:unfolds_in=CL:0000023]) [-3] ! parse: GO:0007312 using "oocyte nucleus migration during oocyte axis determination" => cdef(GO:0007309, [and=results_in_developmental_progression_of(anon(migration during, anatomy))/unfolds_in(GO:0005634), OBO_REL:unfolds_in=FBbt:00004886]) [-3] ! parse: GO:0007312 using "oocyte nucleus migration during oocyte axis determination" => cdef(GO:0007309, [and=results_in_developmental_progression_of(anon(migration during, anatomy))/unfolds_in(GO:0005634), OBO_REL:unfolds_in=MA:0000388]) [-3] ! parse: GO:0007312 using "oocyte nucleus migration during oocyte axis determination" => cdef(GO:0007309, [and=results_in_developmental_progression_of(anon(migration during, anatomy))/unfolds_in(GO:0005634), OBO_REL:unfolds_in=ZFA:0001109]) [-3] ! parse: GO:0007312 using "oocyte nucleus migration during oocyte axis determination" => cdef(GO:0009798, [OBO_REL:results_in_developmental_progression_of=anon(migration during oocyte, anatomy), OBO_REL:unfolds_in=FBbt:00004888]) [-25] ! parse: GO:0007312 using "oocyte nucleus migration during oocyte axis determination" => cdef(GO:0009798, [and=results_in_developmental_progression_of(anon(migration during oocyte, anatomy))/unfolds_in(GO:0005634), OBO_REL:unfolds_in=CL:0000023]) [-3] ! parse: GO:0007312 using "oocyte nucleus migration during oocyte axis determination" => cdef(GO:0009798, [and=results_in_developmental_progression_of(anon(migration during oocyte, anatomy))/unfolds_in(GO:0005634), OBO_REL:unfolds_in=FBbt:00004886]) [-3] ! parse: GO:0007312 using "oocyte nucleus migration during oocyte axis determination" => cdef(GO:0009798, [and=results_in_developmental_progression_of(anon(migration during oocyte, anatomy))/unfolds_in(GO:0005634), OBO_REL:unfolds_in=MA:0000388]) [-3] ! parse: GO:0007312 using "oocyte nucleus migration during oocyte axis determination" => cdef(GO:0009798, [and=results_in_developmental_progression_of(anon(migration during oocyte, anatomy))/unfolds_in(GO:0005634), OBO_REL:unfolds_in=ZFA:0001109]) [-3] ! parse: GO:0007312 using "oocyte nucleus migration during oocyte axis determination (sensu Insecta)" => cdef(GO:0007097, [OBO_REL:part_of=GO:0007309, OBO_REL:unfolds_in=CL:0000023]) [-3] ! parse: GO:0007312 using "oocyte nucleus migration during oocyte axis determination (sensu Insecta)" => cdef(GO:0007097, [OBO_REL:part_of=GO:0007309, OBO_REL:unfolds_in=FBbt:00004886]) [-3] ! parse: GO:0007312 using "oocyte nucleus migration during oocyte axis determination (sensu Insecta)" => cdef(GO:0007097, [OBO_REL:part_of=GO:0007309, OBO_REL:unfolds_in=MA:0000388]) [-3] ! parse: GO:0007312 using "oocyte nucleus migration during oocyte axis determination (sensu Insecta)" => cdef(GO:0007097, [OBO_REL:part_of=GO:0007309, OBO_REL:unfolds_in=ZFA:0001109]) [-3] ! parse: GO:0007312 using "oocyte nucleus migration during oocyte axis determination (sensu Insecta)" => cdef(GO:0007309, [OBO_REL:results_in_developmental_progression_of=anon(migration during, anatomy), OBO_REL:unfolds_in=FBbt:00004888]) [-18] ! parse: GO:0007312 using "oocyte nucleus migration during oocyte axis determination (sensu Insecta)" => cdef(GO:0007309, [and=results_in_developmental_progression_of(anon(migration during, anatomy))/unfolds_in(GO:0005634), OBO_REL:unfolds_in=CL:0000023]) [-3] ! parse: GO:0007312 using "oocyte nucleus migration during oocyte axis determination (sensu Insecta)" => cdef(GO:0007309, [and=results_in_developmental_progression_of(anon(migration during, anatomy))/unfolds_in(GO:0005634), OBO_REL:unfolds_in=FBbt:00004886]) [-3] ! parse: GO:0007312 using "oocyte nucleus migration during oocyte axis determination (sensu Insecta)" => cdef(GO:0007309, [and=results_in_developmental_progression_of(anon(migration during, anatomy))/unfolds_in(GO:0005634), OBO_REL:unfolds_in=MA:0000388]) [-3] ! parse: GO:0007312 using "oocyte nucleus migration during oocyte axis determination (sensu Insecta)" => cdef(GO:0007309, [and=results_in_developmental_progression_of(anon(migration during, anatomy))/unfolds_in(GO:0005634), OBO_REL:unfolds_in=ZFA:0001109]) [-3] ! no existing xp def ! def: "The directed movement of the oocyte nucleus within the cell during the establishment and maintenance of the axes of the oocyte." ! PROPOSED: axis specification that and results_in_developmental_progression_of(anon(migration during oocyte, anatomy))/unfolds_in(GO:0005634) and OBO_REL:unfolds_in oocyte [cdef(GO:0009798, [and=results_in_developmental_progression_of(anon(migration during oocyte, anatomy))/unfolds_in(GO:0005634), OBO_REL:unfolds_in=ZFA:0001109])] [Term] id: GO:0007312 ! oocyte nucleus migration during oocyte axis determination intersection_of: GO:0009798 ! axis specification intersection_of: and results_in_developmental_progression_of(anon(migration during oocyte, anatomy))/unfolds_in(GO:0005634) intersection_of: OBO_REL:unfolds_in ZFA:0001109 ! oocyte ! seconds spent parsing GO:0007312: 269.76 ! parse: GO:0007314 using "oocyte anterior/posterior axis determination" => cdef(GO:0009798, [OBO_REL:results_in_developmental_progression_of=anon(anterior/posterior, anatomy), OBO_REL:unfolds_in=CL:0000023]) [-20] ! parse: GO:0007314 using "oocyte anterior/posterior axis determination" => cdef(GO:0009798, [OBO_REL:results_in_developmental_progression_of=anon(anterior/posterior, anatomy), OBO_REL:unfolds_in=FBbt:00004886]) [-20] ! parse: GO:0007314 using "oocyte anterior/posterior axis determination" => cdef(GO:0009798, [OBO_REL:results_in_developmental_progression_of=anon(anterior/posterior, anatomy), OBO_REL:unfolds_in=MA:0000388]) [-20] ! parse: GO:0007314 using "oocyte anterior/posterior axis determination" => cdef(GO:0009798, [OBO_REL:results_in_developmental_progression_of=anon(anterior/posterior, anatomy), OBO_REL:unfolds_in=ZFA:0001109]) [-20] ! no existing xp def ! def: "Polarization of the oocyte along its anterior-posterior axis." ! PROPOSED: axis specification that OBO_REL:results_in_developmental_progression_of anon(anterior/posterior, anatomy) and OBO_REL:unfolds_in oocyte [cdef(GO:0009798, [OBO_REL:results_in_developmental_progression_of=anon(anterior/posterior, anatomy), OBO_REL:unfolds_in=ZFA:0001109])] [Term] id: GO:0007314 ! oocyte anterior/posterior axis determination intersection_of: GO:0009798 ! axis specification intersection_of: OBO_REL:results_in_developmental_progression_of anatomy:anterior_/_posterior intersection_of: OBO_REL:unfolds_in ZFA:0001109 ! oocyte synonym: "ovarian follicle stage V anterior/posterior axis determination" EXACT [OBOL:automatic] synonym: "ovarian follicle stage V anterior/posterior axis specification" EXACT [OBOL:automatic] ! seconds spent parsing GO:0007314: 31.79 ! parse: GO:0007315 using "pole plasm assembly" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0045495]) [-2] ! no existing xp def ! def: "Establishment of the specialized cytoplasm found at the poles of the egg." ! PROPOSED: cellular component assembly that OBO_REL:results_in_creation_of pole plasm [cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0045495])] [Term] id: GO:0007315 ! pole plasm assembly intersection_of: GO:0022607 ! cellular component assembly intersection_of: OBO_REL:results_in_creation_of GO:0045495 ! pole plasm synonym: "assembly and maintenance of polar plasm" EXACT [OBOL:automatic] synonym: "assembly and maintenance of pole plasm" EXACT [OBOL:automatic] synonym: "assembly of polar plasm" EXACT [OBOL:automatic] synonym: "assembly of pole plasm" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of polar plasm" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of pole plasm" EXACT [OBOL:automatic] synonym: "biogenesis of polar plasm" EXACT [OBOL:automatic] synonym: "biogenesis of pole plasm" EXACT [OBOL:automatic] synonym: "cell structure assembly of polar plasm" EXACT [OBOL:automatic] synonym: "cell structure assembly of pole plasm" EXACT [OBOL:automatic] synonym: "cellular component assembly of polar plasm" EXACT [OBOL:automatic] synonym: "cellular component assembly of pole plasm" EXACT [OBOL:automatic] synonym: "complex assembly of polar plasm" EXACT [OBOL:automatic] synonym: "complex assembly of pole plasm" EXACT [OBOL:automatic] synonym: "formation of polar plasm" EXACT [OBOL:automatic] synonym: "formation of pole plasm" EXACT [OBOL:automatic] synonym: "polar plasm assembly" EXACT [OBOL:automatic] synonym: "polar plasm assembly and maintenance" EXACT [OBOL:automatic] synonym: "polar plasm biogenesis" EXACT [OBOL:automatic] synonym: "polar plasm biogenesis and assembly" EXACT [OBOL:automatic] synonym: "polar plasm cell structure assembly" EXACT [OBOL:automatic] synonym: "polar plasm cellular component assembly" EXACT [OBOL:automatic] synonym: "polar plasm complex assembly" EXACT [OBOL:automatic] synonym: "polar plasm formation" EXACT [OBOL:automatic] synonym: "pole plasm assembly and maintenance" EXACT [OBOL:automatic] synonym: "pole plasm biogenesis" EXACT [OBOL:automatic] synonym: "pole plasm biogenesis and assembly" EXACT [OBOL:automatic] synonym: "pole plasm cell structure assembly" EXACT [OBOL:automatic] synonym: "pole plasm cellular component assembly" EXACT [OBOL:automatic] synonym: "pole plasm complex assembly" EXACT [OBOL:automatic] synonym: "pole plasm formation" EXACT [OBOL:automatic] def: "The aggregation and bonding together of a set of macromolecules to form a polar plasm" [OBOL:automatic] ! seconds spent parsing GO:0007315: 16.48 ! Already have xp for: GO:0007316 pole plasm RNA localization ! CURRENT : RNA localization that OBO_REL:results_in_localization_of pole plasm [cdef(GO:0006403, [OBO_REL:results_in_localization_of=GO:0045495])] ! Already have xp for: GO:0007318 pole plasm protein localization ! CURRENT : protein localization that OBO_REL:results_in_localization_of pole plasm [cdef(GO:0008104, [OBO_REL:results_in_localization_of=GO:0045495])] ! No parse for: GO:0007321 sperm displacement ! No parse for: GO:0007338 single fertilization ! No parse for: GO:0007339 binding of sperm to zona pellucida ! No parse for: GO:0007340 acrosome reaction ! No parse for: GO:0007342 fusion of sperm to egg plasma membrane ! No parse for: GO:0007349 cellularization ! parse: GO:0007350 using "blastoderm segmentation" => cdef(GO:0035282, [OBO_REL:results_in_developmental_progression_of=ZFA:0001176]) [-2] ! parse: GO:0007350 using "blastoderm segmentation" => cdef(GO:0035282, [OBO_REL:results_in_patterning_for=ZFA:0001176]) [-2] ! parse: GO:0007350 using "blastoderm segmentation" => cdef(GO:0035282, [OBO_REL:unfolds_in=ZFA:0001176]) [-2] ! no existing xp def ! def: "The hierarchical steps resulting in the progressive subdivision of the anterior/posterior axis of the embryo." ! PROPOSED: segmentation that OBO_REL:unfolds_in blastoderm [cdef(GO:0035282, [OBO_REL:unfolds_in=ZFA:0001176])] [Term] id: GO:0007350 ! blastoderm segmentation intersection_of: GO:0035282 ! segmentation intersection_of: OBO_REL:unfolds_in ZFA:0001176 ! blastoderm ! seconds spent parsing GO:0007350: 9.05 ! No parse for: GO:0007352 zygotic determination of dorsal/ventral axis ! Already have xp for: GO:0007354 zygotic determination of anterior/posterior axis, embryo ! CURRENT : determination of anterior/posterior axis, embryo that OBO_REL:results_in_patterning_for zygotic [cdef(GO:0008595, [OBO_REL:results_in_patterning_for=cell:zygotic])] ! No parse for: GO:0007356 thorax and anterior abdomen determination ! No parse for: GO:0007362 terminal region determination ! No parse for: GO:0007367 segment polarity determination ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0007370 using "ventral furrow formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=FBbt:00000096]) [-2] ! parse: GO:0007370 using "ventral furrow formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=FBbt:00000096]) [-2] ! no existing xp def ! def: "Formation of a ventral indentation (furrow) from the blastoderm epithelium, which is internalized to form a tube in the interior of the embryo, marking the start of gastrulation." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of ventral furrow [cdef(GO:0048646, [OBO_REL:results_in_formation_of=FBbt:00000096])] [Term] id: GO:0007370 ! ventral furrow formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of FBbt:00000096 ! ventral furrow ! seconds spent parsing GO:0007370: 5.38 ! No parse for: GO:0007371 ventral midline determination ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0007376 using "cephalic furrow formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=FBbt:00000097]) [-2] ! parse: GO:0007376 using "cephalic furrow formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=FBbt:00000097]) [-2] ! no existing xp def ! def: "Formation of a partial necklace of inturning tissue on the lateral sides of the embryo, along the dorsal-ventral axis. This furrow demarcates head from thorax in the developing protostome." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of cephalic furrow [cdef(GO:0048646, [OBO_REL:results_in_formation_of=FBbt:00000097])] [Term] id: GO:0007376 ! cephalic furrow formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of FBbt:00000097 ! cephalic furrow ! seconds spent parsing GO:0007376: 5.1 ! No parse for: GO:0007377 germ-band extension ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0007378 using "amnioserosa formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=FBbt:00000095]) [-2] ! parse: GO:0007378 using "amnioserosa formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=FBbt:00000095]) [-2] ! no existing xp def ! def: "Formation of the amnioserosa, an epithelium that occupies a hole in the embryonic dorsal epidermis. This occurs by the transformation of a narrow strip of cells at the dorsal midline of the blastoderm from columnar to squamous cells, accompanied by a lateral shift." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of amnioserosa [cdef(GO:0048646, [OBO_REL:results_in_formation_of=FBbt:00000095])] [Term] id: GO:0007378 ! amnioserosa formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of FBbt:00000095 ! amnioserosa ! seconds spent parsing GO:0007378: 5.1 ! parse: GO:0007379 using "segment specification" => cdef(GO:0007389, [OBO_REL:results_in_specification_of=FBbt:00000003]) [-2] ! no existing xp def ! def: "The process during which segments assume individual identities; exemplified in insects by the actions of the products of the homeotic genes." ! PROPOSED: pattern specification process that OBO_REL:results_in_specification_of segment [cdef(GO:0007389, [OBO_REL:results_in_specification_of=FBbt:00000003])] [Term] id: GO:0007379 ! segment specification intersection_of: GO:0007389 ! pattern specification process intersection_of: OBO_REL:results_in_specification_of FBbt:00000003 ! segment ! seconds spent parsing GO:0007379: 4.64 ! No parse for: GO:0007390 germ-band shortening ! No parse for: GO:0007396 suture of dorsal opening ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0007398 using "ectoderm development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00000111]) [-2] ! parse: GO:0007398 using "ectoderm development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000016]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the ectoderm over time, from its formation to the mature structure. In animal embryos, the ectoderm is the outer germ layer of the embryo, formed during gastrulation." ! PROPOSED: developmental process that results_in_complete_developmental_of ectoderm [cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000016])] [Term] id: GO:0007398 ! ectoderm development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of ZFA:0000016 ! ectoderm ! seconds spent parsing GO:0007398: 5.28 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0007399 using "nervous system development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00005093]) [-2] ! parse: GO:0007399 using "nervous system development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000016]) [-2] ! parse: GO:0007399 using "nervous system development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000396]) [-2] ! parse: GO:0007399 using "neurite biosynthesis" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=FBbt:00005113]) [-2] ! parse: GO:0007399 using "neurite formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=FBbt:00005113]) [-2] ! parse: GO:0007399 using "neurite formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=FBbt:00005113]) [-2] ! parse: GO:0007399 using "neurite growth" => cdef(GO:0040007, [OBO_REL:results_in_increase_in_mass_of=FBbt:00005113]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of neurite [cdef(GO:0048646, [OBO_REL:results_in_formation_of=FBbt:00005113])] [Term] id: GO:0007399 ! nervous system development intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of FBbt:00005113 ! neurite ! seconds spent parsing GO:0007399: 34.24 ! Already have xp for: GO:0007400 neuroblast fate determination ! CURRENT : cell fate determination that OBO_REL:results_in_determination_to neuroblast [cdef(GO:0001709, [OBO_REL:results_in_determination_to=CL:0000031])] ! Already have xp for: GO:0007402 ganglion mother cell fate determination ! CURRENT : cell fate determination that OBO_REL:results_in_determination_to ganglion mother cell [cdef(GO:0001709, [OBO_REL:results_in_determination_to=CL:0000469])] ! Already have xp for: GO:0007403 glial cell fate determination ! CURRENT : cell fate determination that OBO_REL:results_in_determination_to glial cell [cdef(GO:0001709, [OBO_REL:results_in_determination_to=CL:0000125])] ! Already have xp for: GO:0007405 neuroblast proliferation ! CURRENT : cell proliferation that OBO_REL:increases_population_size_of neuroblast [cdef(GO:0008283, [OBO_REL:increases_population_size_of=CL:0000031])] ! Already have xp for: GO:0007407 neuroblast activation ! CURRENT : cell activation that OBO_REL:results_in_change_to neuroblast [cdef(GO:0001775, [OBO_REL:results_in_change_to=CL:0000031])] ! No parse for: GO:0007409 axonogenesis ! No parse for: GO:0007411 axon guidance ! No parse for: GO:0007412 axon target recognition ! No parse for: GO:0007413 axonal fasciculation ! No parse for: GO:0007414 axonal defasciculation ! parse: GO:0007416 using "synapse biogenesis" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0045202]) [-2] ! no existing xp def ! def: "The biosynthesis of a synapse." ! PROPOSED: cellular component assembly that OBO_REL:results_in_creation_of synapse [cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0045202])] [Term] id: GO:0007416 ! synaptogenesis intersection_of: GO:0022607 ! cellular component assembly intersection_of: OBO_REL:results_in_creation_of GO:0045202 ! synapse synonym: "assembly and maintenance of synapse" EXACT [OBOL:automatic] synonym: "assembly and maintenance of synaptic junction" EXACT [OBOL:automatic] synonym: "assembly of synapse" EXACT [OBOL:automatic] synonym: "assembly of synaptic junction" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of synapse" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of synaptic junction" EXACT [OBOL:automatic] synonym: "biogenesis of synapse" EXACT [OBOL:automatic] synonym: "biogenesis of synaptic junction" EXACT [OBOL:automatic] synonym: "cell structure assembly of synapse" EXACT [OBOL:automatic] synonym: "cell structure assembly of synaptic junction" EXACT [OBOL:automatic] synonym: "cellular component assembly of synapse" EXACT [OBOL:automatic] synonym: "cellular component assembly of synaptic junction" EXACT [OBOL:automatic] synonym: "complex assembly of synapse" EXACT [OBOL:automatic] synonym: "complex assembly of synaptic junction" EXACT [OBOL:automatic] synonym: "formation of synapse" EXACT [OBOL:automatic] synonym: "formation of synaptic junction" EXACT [OBOL:automatic] synonym: "synapse assembly" EXACT [OBOL:automatic] synonym: "synapse assembly and maintenance" EXACT [OBOL:automatic] synonym: "synapse biogenesis and assembly" EXACT [OBOL:automatic] synonym: "synapse cell structure assembly" EXACT [OBOL:automatic] synonym: "synapse cellular component assembly" EXACT [OBOL:automatic] synonym: "synapse complex assembly" EXACT [OBOL:automatic] synonym: "synapse formation" EXACT [OBOL:automatic] synonym: "synaptic junction assembly" EXACT [OBOL:automatic] synonym: "synaptic junction assembly and maintenance" EXACT [OBOL:automatic] synonym: "synaptic junction biogenesis" EXACT [OBOL:automatic] synonym: "synaptic junction biogenesis and assembly" EXACT [OBOL:automatic] synonym: "synaptic junction cell structure assembly" EXACT [OBOL:automatic] synonym: "synaptic junction cellular component assembly" EXACT [OBOL:automatic] synonym: "synaptic junction complex assembly" EXACT [OBOL:automatic] synonym: "synaptic junction formation" EXACT [OBOL:automatic] def: "The aggregation and bonding together of a set of macromolecules to form a synapse" [OBOL:automatic] ! seconds spent parsing GO:0007416: 13.87 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0007417 using "CNS development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00005094]) [-2] ! parse: GO:0007417 using "central nervous system development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00005094]) [-2] ! parse: GO:0007417 using "central nervous system development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000167]) [-2] ! parse: GO:0007417 using "central nervous system development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000012]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord." ! PROPOSED: developmental process that results_in_complete_developmental_of central nervous system [cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000012])] [Term] id: GO:0007417 ! central nervous system development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of ZFA:0000012 ! central nervous system synonym: "cns development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0007417: 11.28 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0007418 using "ventral midline development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00000093]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the ventral midline over time, from its formation to the mature structure. In protostomes (such as insects, snails and worms) as well as deuterostomes (vertebrates), the midline is an embryonic region that functions in patterning of the adjacent nervous tissue. The ventral midline in insects is a cell population extending along the ventral surface of the embryo and is the region from which cells detach to form the ventrally located nerve cords. In vertebrates, the midline is originally located dorsally. During development, it folds inwards and becomes the ventral part of the dorsally located neural tube and is then called the ventral midline, or floor plate." ! PROPOSED: developmental process that results_in_complete_developmental_of ventral midline [cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00000093])] [Term] id: GO:0007418 ! ventral midline development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of FBbt:00000093 ! ventral midline synonym: "medial cord development" EXACT [OBOL:automatic] synonym: "midline development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0007418: 4.96 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0007419 using "ventral cord development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(ventral cord, anatomy)]) [-13] ! no existing xp def ! def: "The process whose specific outcome is the progression of the ventral cord over time, from its formation to the mature structure. The ventral cord is one of the distinguishing traits of the central nervous system of all arthropods (such as insects, crustaceans and arachnids) as well as many other invertebrates, such as the annelid worms." ! PROPOSED: developmental process that results_in_complete_developmental_of anon(ventral cord, anatomy) [cdef(GO:0032502, [results_in_complete_developmental_of=anon(ventral cord, anatomy)])] [Term] id: GO:0007419 ! ventral cord development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of anatomy:ventral_cord ! seconds spent parsing GO:0007419: 4.37 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0007420 using "brain development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00005095]) [-2] ! parse: GO:0007420 using "brain development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000168]) [-2] ! parse: GO:0007420 using "brain development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000008]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.)." ! PROPOSED: developmental process that results_in_complete_developmental_of brain [cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000008])] [Term] id: GO:0007420 ! brain development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of ZFA:0000008 ! brain ! seconds spent parsing GO:0007420: 5.93 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0007421 using "stomatogastric nervous system development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00005096]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the stomatogastric nervous system over time, from its formation to the mature structure." ! PROPOSED: developmental process that results_in_complete_developmental_of stomatogastric nervous system [cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00005096])] [Term] id: GO:0007421 ! stomatogastric nervous system development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of FBbt:00005096 ! stomatogastric nervous system ! seconds spent parsing GO:0007421: 4.81 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0007422 using "peripheral nervous system development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00005098]) [-2] ! parse: GO:0007422 using "peripheral nervous system development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000218]) [-2] ! parse: GO:0007422 using "peripheral nervous system development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000142]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the peripheral nervous system over time, from its formation to the mature structure. The peripheral nervous system is one of the two major divisions of the nervous system. Nerves in the PNS connect the central nervous system (CNS) with sensory organs, other organs, muscles, blood vessels and glands." ! PROPOSED: developmental process that results_in_complete_developmental_of peripheral nervous system [cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000142])] [Term] id: GO:0007422 ! peripheral nervous system development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of ZFA:0000142 ! peripheral nervous system synonym: "pns development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0007422: 6.4 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0007423 using "sensory organ development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000017]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of sensory organs over time, from its formation to the mature structure." ! PROPOSED: developmental process that results_in_complete_developmental_of sensory organ [cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000017])] [Term] id: GO:0007423 ! sensory organ development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of MA:0000017 ! sensory organ ! seconds spent parsing GO:0007423: 4.81 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0007424 using "open tracheal system development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(open tracheal system, anatomy)]) [-21] ! parse: GO:0007424 using "open tracheal system development" => cdef(GO:0048731, [OBO_REL:results_in_developmental_progression_of=anon(open tracheal, anatomy)]) [-14] ! no existing xp def ! def: "The process whose specific outcome is the progression of an open tracheal system over time, from its formation to the mature structure. An open tracheal system is a respiratory system, a branched network of epithelial tubes that supplies oxygen to target tissues via spiracles." ! PROPOSED: system development that OBO_REL:results_in_developmental_progression_of anon(open tracheal, anatomy) [cdef(GO:0048731, [OBO_REL:results_in_developmental_progression_of=anon(open tracheal, anatomy)])] [Term] id: GO:0007424 ! open tracheal system development intersection_of: GO:0048731 ! system development intersection_of: OBO_REL:results_in_developmental_progression_of anatomy:open_tracheal ! seconds spent parsing GO:0007424: 14.43 ! No parse for: GO:0007425 epithelial cell fate determination, open tracheal system ! No parse for: GO:0007426 tracheal outgrowth, open tracheal system ! No parse for: GO:0007427 epithelial cell migration, open tracheal system ! No parse for: GO:0007428 primary branching, open tracheal system ! No parse for: GO:0007430 terminal branching, open tracheal system ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0007431 using "salivary gland development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00005382]) [-2] ! parse: GO:0007431 using "salivary gland development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000346]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the salivary gland over time, from its formation to the mature structure. Salivary glands include any of the saliva-secreting exocrine glands of the oral cavity." ! PROPOSED: developmental process that results_in_complete_developmental_of salivary gland [cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000346])] [Term] id: GO:0007431 ! salivary gland development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of MA:0000346 ! salivary gland ! seconds spent parsing GO:0007431: 5.33 ! No parse for: GO:0007432 salivary gland boundary specification ! No parse for: GO:0007433 larval salivary gland determination ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0007434 using "adult salivary gland determination" => cdef(GO:0007432, [OBO_REL:results_in_developmental_progression_of=FBbt:00003004]) [-2] ! parse: GO:0007434 using "adult salivary gland determination" => cdef(GO:0007432, [OBO_REL:results_in_patterning_for=FBbt:00003004]) [-2] ! parse: GO:0007434 using "adult salivary gland determination" => cdef(GO:0007432, [OBO_REL:unfolds_in=FBbt:00003004]) [-2] ! parse: GO:0007434 using "adult salivary gland determination" => cdef(GO:0007432, [OBO_REL:results_in_formation_of=FBbt:00003004]) [-2] ! no existing xp def ! def: "Determination in an adult organism of where the salivary gland forms, the total number of salivary gland cells and how many cells are allocated to each of the specialised cell types within the salivary gland." ! PROPOSED: salivary gland boundary specification that OBO_REL:results_in_formation_of adult [cdef(GO:0007432, [OBO_REL:results_in_formation_of=FBbt:00003004])] [Term] id: GO:0007434 ! adult salivary gland determination intersection_of: GO:0007432 ! salivary gland boundary specification intersection_of: OBO_REL:results_in_formation_of FBbt:00003004 ! adult synonym: "imago salivary gland boundary specification" EXACT [OBOL:automatic] synonym: "imago salivary gland determination" EXACT [OBOL:automatic] ! seconds spent parsing GO:0007434: 7.35 ! parse: GO:0007435 using "salivary gland morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00005382]) [-2] ! parse: GO:0007435 using "salivary gland morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000346]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of the salivary gland are generated and organized. Morphogenesis pertains to the creation of form." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of salivary gland [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000346])] [Term] id: GO:0007435 ! salivary gland morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of MA:0000346 ! salivary gland ! seconds spent parsing GO:0007435: 6.16 ! parse: GO:0007436 using "larval salivary gland morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00005717]) [-2] ! no existing xp def ! def: "The process, occurring in the larva, by which the anatomical structures of the salivary gland are generated and organized. Morphogenesis pertains to the creation of form." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of larval salivary gland [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00005717])] [Term] id: GO:0007436 ! larval salivary gland morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of FBbt:00005717 ! larval salivary gland ! seconds spent parsing GO:0007436: 5.21 ! parse: GO:0007437 using "adult salivary gland morphogenesis" => cdef(GO:0007435, [OBO_REL:results_in_developmental_progression_of=FBbt:00003004]) [-2] ! parse: GO:0007437 using "adult salivary gland morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00003135]) [-2] ! parse: GO:0007437 using "adult salivary gland morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00005382, OBO_REL:unfolds_in=FBbt:00003004]) [-3] ! parse: GO:0007437 using "adult salivary gland morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000346, OBO_REL:unfolds_in=FBbt:00003004]) [-3] ! parse: GO:0007437 using "adult salivary gland morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=cdef(FBbt:00005382, [OBO_REL:part_of=FBbt:00003004])]) [-3] ! parse: GO:0007437 using "adult salivary gland morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=cdef(MA:0000346, [OBO_REL:part_of=FBbt:00003004])]) [-3] ! no existing xp def ! def: "The process by which the anatomical structures of the adult salivary gland are generated and organized. Morphogenesis pertains to the creation of form." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of adult salivary gland [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00003135])] [Term] id: GO:0007437 ! adult salivary gland morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of FBbt:00003135 ! adult salivary gland ! seconds spent parsing GO:0007437: 8.73 ! Already have xp for: GO:0007438 oenocyte development ! CURRENT : developmental process that OBO_REL:results_in_developmental_progression_of oenocyte [cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=CL:0000487])] ! No relation defined: results_in_complete_developmental_of ! parse: GO:0007439 using "ectodermal gut development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(ectodermal gut, anatomy)]) [-15] ! parse: GO:0007439 using "ectodermal gut development" => cdef(GO:0048565, [OBO_REL:results_in_developmental_progression_of=anon(ectodermal, anatomy)]) [-11] ! no existing xp def ! def: "The process whose specific outcome is the progression of the ectodermal gut over time, from its formation to the mature structure. The ectodermal gut includes those portions of the gut that are derived from ectoderm." ! PROPOSED: gut development that OBO_REL:results_in_developmental_progression_of anon(ectodermal, anatomy) [cdef(GO:0048565, [OBO_REL:results_in_developmental_progression_of=anon(ectodermal, anatomy)])] [Term] id: GO:0007439 ! ectodermal gut development intersection_of: GO:0048565 ! gut development intersection_of: OBO_REL:results_in_developmental_progression_of anatomy:ectodermal synonym: "ectodermal intestinal development" EXACT [OBOL:automatic] synonym: "ectodermal intestine development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0007439: 4.41 ! parse: GO:0007440 using "foregut morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00005379]) [-2] ! parse: GO:0007440 using "foregut morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0001526]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of the foregut are generated and organized. Morphogenesis pertains to the creation of form." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of foregut [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0001526])] [Term] id: GO:0007440 ! foregut morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of MA:0001526 ! foregut ! seconds spent parsing GO:0007440: 6.11 ! parse: GO:0007442 using "hindgut morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00005384]) [-2] ! parse: GO:0007442 using "hindgut morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0001527]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of the hindgut are generated and organized. Morphogenesis pertains to the creation of form." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of hindgut [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0001527])] [Term] id: GO:0007442 ! hindgut morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of MA:0001527 ! hindgut ! seconds spent parsing GO:0007442: 6.11 ! parse: GO:0007443 using "Malpighian tubule morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00005786]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of the Malpighian tubule are generated and organized. This process takes place entirely during the embryonic phase. Morphogenesis pertains to the creation of form. A Malpighian tubule is a fine, thin-walled excretory tubule in insects which leads into the posterior part of the gut." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of Malpighian tubule [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00005786])] [Term] id: GO:0007443 ! Malpighian tubule morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of FBbt:00005786 ! Malpighian tubule ! seconds spent parsing GO:0007443: 5.1 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0007444 using "imaginal disc development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00001761]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the imaginal disc over time, from its formation to the metamorphosis to form adult structures. Imaginal discs are epithelial infoldings in the larvae of holometabolous insects that develop into adult structures (legs, antennae, wings, etc.)." ! PROPOSED: developmental process that results_in_complete_developmental_of imaginal disc [cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00001761])] [Term] id: GO:0007444 ! imaginal disc development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of FBbt:00001761 ! imaginal disc synonym: "imaginal disk development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0007444: 4.65 ! parse: GO:0007446 using "imaginal disc growth" => cdef(GO:0040007, [OBO_REL:results_in_increase_in_mass_of=FBbt:00001761]) [-2] ! no existing xp def ! def: "The increase in mass of imaginal discs by cell proliferation prior to metamorphosis. Imaginal discs are epithelial infoldings in the larvae of holometabolous insects that develop into adult structures (legs, antennae, wings, etc.) during metamorphosis from larval to adult form." ! PROPOSED: growth that OBO_REL:results_in_increase_in_mass_of imaginal disc [cdef(GO:0040007, [OBO_REL:results_in_increase_in_mass_of=FBbt:00001761])] [Term] id: GO:0007446 ! imaginal disc growth intersection_of: GO:0040007 ! growth intersection_of: OBO_REL:results_in_increase_in_mass_of FBbt:00001761 ! imaginal disc synonym: "imaginal disk growth" EXACT [OBOL:automatic] synonym: "imaginal disk growth pattern" EXACT [OBOL:automatic] ! seconds spent parsing GO:0007446: 5.08 ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0007447 using "imaginal disc pattern formation" => cdef(GO:0007389, [OBO_REL:results_in_developmental_progression_of=FBbt:00001761]) [-2] ! parse: GO:0007447 using "imaginal disc pattern formation" => cdef(GO:0007389, [OBO_REL:results_in_patterning_for=FBbt:00001761]) [-2] ! parse: GO:0007447 using "imaginal disc pattern formation" => cdef(GO:0007389, [OBO_REL:unfolds_in=FBbt:00001761]) [-2] ! parse: GO:0007447 using "imaginal disc pattern formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(pattern, anatomy), OBO_REL:unfolds_in=FBbt:00001761]) [-9] ! no existing xp def ! def: "The regionalization process that results in defined areas of the imaginal disc that will undergo specific cell differentaiton. Imaginal discs are epithelial infoldings in the larvae of holometabolous insects that develop into adult appendages (legs, antennae, wings, etc.) during metamorphosis from larval to adult form." ! PROPOSED: pattern specification process that OBO_REL:unfolds_in imaginal disc [cdef(GO:0007389, [OBO_REL:unfolds_in=FBbt:00001761])] [Term] id: GO:0007447 ! imaginal disc pattern formation intersection_of: GO:0007389 ! pattern specification process intersection_of: OBO_REL:unfolds_in FBbt:00001761 ! imaginal disc synonym: "imaginal disk pattern biosynthesis" EXACT [OBOL:automatic] synonym: "imaginal disk pattern formation" EXACT [OBOL:automatic] synonym: "imaginal disk pattern specification process" EXACT [OBOL:automatic] synonym: "pattern biosynthesis in imaginal disk" EXACT [OBOL:automatic] synonym: "pattern biosynthesis in the imaginal disk" EXACT [OBOL:automatic] synonym: "pattern biosynthesis through the imaginal disk" EXACT [OBOL:automatic] synonym: "pattern specification process in imaginal disk" EXACT [OBOL:automatic] synonym: "pattern specification process in the imaginal disk" EXACT [OBOL:automatic] synonym: "pattern specification process through the imaginal disk" EXACT [OBOL:automatic] ! seconds spent parsing GO:0007447: 9.34 ! parse: GO:0007453 using "clypeo-labral disc metamorphosis" => cdef(GO:0007552, [OBO_REL:results_in_developmental_progression_of=FBbt:00001765]) [-2] ! parse: GO:0007453 using "clypeo-labral disc morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00001765]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures derived from the clypeo-labral disc are generated and organized. Morphogenesis pertains to the creation of form. This includes the transformation of a clypeo-labal imaginal disc from a monolayered epithelium in the larvae of holometabolous insects into recognizable adult structures including the labrum, anterior and posterior cibarial plates, fish trap bristles, epistomal sclerite and clypeus." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of clypeo-labral disc [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00001765])] [Term] id: GO:0007453 ! clypeo-labral disc morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of FBbt:00001765 ! clypeo-labral disc ! seconds spent parsing GO:0007453: 22.93 ! parse: GO:0007454 using "labial disc metamorphosis" => cdef(GO:0007552, [OBO_REL:results_in_developmental_progression_of=FBbt:00001764]) [-2] ! parse: GO:0007454 using "labial disc morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00001764]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures derived from the labial disc are generated and organized. Morphogenesis pertains to the creation of form. This includes the transformation of a labial imaginal disc from a monolayered epithelium in the larvae of holometabolous insects into recognizable adult structures including parts of the proboscis." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of labial disc [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00001764])] [Term] id: GO:0007454 ! labial disc morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of FBbt:00001764 ! labial disc ! seconds spent parsing GO:0007454: 10.15 ! parse: GO:0007455 using "eye-antennal disc metamorphosis" => cdef(GO:0007552, [OBO_REL:results_in_developmental_progression_of=FBbt:00001766]) [-2] ! parse: GO:0007455 using "eye-antennal disc metamorphosis" => cdef(GO:0007552, [OBO_REL:results_in_developmental_progression_of=anon(- antennal disc, anatomy), OBO_REL:unfolds_in=FBbt:00004508]) [-17] ! parse: GO:0007455 using "eye-antennal disc metamorphosis" => cdef(GO:0007552, [OBO_REL:results_in_developmental_progression_of=anon(- antennal disc, anatomy), OBO_REL:unfolds_in=MA:0000261]) [-17] ! parse: GO:0007455 using "eye-antennal disc metamorphosis" => cdef(GO:0007552, [OBO_REL:results_in_developmental_progression_of=anon(- antennal disc, anatomy), OBO_REL:unfolds_in=ZFA:0000107]) [-17] ! parse: GO:0007455 using "eye-antennal disc morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00001766]) [-2] ! parse: GO:0007455 using "eye-antennal disc morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(- antennal disc, anatomy), OBO_REL:unfolds_in=FBbt:00004508]) [-17] ! parse: GO:0007455 using "eye-antennal disc morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(- antennal disc, anatomy), OBO_REL:unfolds_in=MA:0000261]) [-17] ! parse: GO:0007455 using "eye-antennal disc morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(- antennal disc, anatomy), OBO_REL:unfolds_in=ZFA:0000107]) [-17] ! no existing xp def ! def: "The process by which the anatomical structures derived from the eye-antennal disc are generated and organized. Morphogenesis pertains to the creation of form. This includes the transformation of an eye-antennal imaginal disc from a monolayered epithelium in the larvae of holometabolous insects into recognizable adult structures including the eye, antenna, head capsule and maxillary palps." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of eye-antennal disc [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00001766])] [Term] id: GO:0007455 ! eye-antennal disc morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of FBbt:00001766 ! eye-antennal disc ! seconds spent parsing GO:0007455: 23.69 ! parse: GO:0007472 using "wing disc metamorphosis" => cdef(GO:0007552, [OBO_REL:results_in_developmental_progression_of=FBbt:00001778]) [-2] ! parse: GO:0007472 using "wing disc metamorphosis" => cdef(GO:0007552, [OBO_REL:results_in_developmental_progression_of=anon(disc, anatomy), OBO_REL:unfolds_in=FBbt:00004729]) [-6] ! parse: GO:0007472 using "wing disc morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00001778]) [-2] ! parse: GO:0007472 using "wing disc morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(disc, anatomy), OBO_REL:unfolds_in=FBbt:00004729]) [-6] ! no existing xp def ! def: "The process by which the anatomical structures derived from the wing disc are generated and organized. Morphogenesis pertains to the creation of form. This includes the transformation of a wing imaginal disc from a monolayered epithelium in the larvae of holometabolous insects into recognizable adult structures including the wing hinge, wing blade and pleura." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of dorsal mesothoracic disc [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00001778])] [Term] id: GO:0007472 ! wing disc morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of FBbt:00001778 ! dorsal mesothoracic disc synonym: "dorsal mesothoracic disc anatomical structure morphogenesis" EXACT [OBOL:automatic] synonym: "dorsal mesothoracic disc morphogenesis" EXACT [OBOL:automatic] ! seconds spent parsing GO:0007472: 19.11 ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0007473 using "wing disc proximal/distal pattern formation" => cdef(GO:0007389, [OBO_REL:results_in_developmental_progression_of=anon(disc proximal/distal, anatomy), OBO_REL:unfolds_in=FBbt:00004729]) [-22] ! parse: GO:0007473 using "wing disc proximal/distal pattern formation" => cdef(GO:0007389, [OBO_REL:results_in_developmental_progression_of=anon(proximal/distal, anatomy), OBO_REL:unfolds_in=FBbt:00001778]) [-17] ! parse: GO:0007473 using "wing disc proximal/distal pattern formation" => cdef(GO:0009954, [OBO_REL:results_in_developmental_progression_of=FBbt:00001778]) [-2] ! parse: GO:0007473 using "wing disc proximal/distal pattern formation" => cdef(GO:0009954, [OBO_REL:results_in_developmental_progression_of=anon(disc, anatomy), OBO_REL:unfolds_in=FBbt:00004729]) [-6] ! parse: GO:0007473 using "wing disc proximal/distal pattern formation" => cdef(GO:0009954, [OBO_REL:results_in_patterning_for=FBbt:00001778]) [-2] ! parse: GO:0007473 using "wing disc proximal/distal pattern formation" => cdef(GO:0009954, [OBO_REL:unfolds_in=FBbt:00001778]) [-2] ! parse: GO:0007473 using "wing disc proximal/distal pattern formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(disc proximal/distal pattern, anatomy), OBO_REL:unfolds_in=FBbt:00004729]) [-30] ! parse: GO:0007473 using "wing disc proximal/distal pattern formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(proximal/distal pattern, anatomy), OBO_REL:unfolds_in=FBbt:00001778]) [-25] ! no existing xp def ! def: "The establishment, maintenance and elaboration of the proximal/distal axis of the wing disc, a precursor to the adult wing." ! PROPOSED: proximal/distal pattern formation that OBO_REL:unfolds_in dorsal mesothoracic disc [cdef(GO:0009954, [OBO_REL:unfolds_in=FBbt:00001778])] [Term] id: GO:0007473 ! wing disc proximal/distal pattern formation intersection_of: GO:0009954 ! proximal/distal pattern formation intersection_of: OBO_REL:unfolds_in FBbt:00001778 ! dorsal mesothoracic disc synonym: "dorsal mesothoracic disc proximal/distal pattern formation" EXACT [OBOL:automatic] ! seconds spent parsing GO:0007473: 15.55 ! parse: GO:0007474 using "imaginal disc-derived wing vein specification" => cdef(GO:0007389, [OBO_REL:results_in_specification_of=MA:0000067, OBO_REL:unfolds_in=cdef(FBbt:00001761, [OBO_REL:derives_from=FBbt:00004729])]) [-4] ! parse: GO:0007474 using "imaginal disc-derived wing vein specification" => cdef(GO:0007389, [OBO_REL:results_in_specification_of=ZFA:0000082, OBO_REL:unfolds_in=cdef(FBbt:00001761, [OBO_REL:derives_from=FBbt:00004729])]) [-4] ! parse: GO:0007474 using "imaginal disc-derived wing vein specification" => cdef(GO:0007389, [OBO_REL:results_in_specification_of=cdef(FBbt:00001761, [OBO_REL:derives_from=FBbt:00004751])]) [-3] ! parse: GO:0007474 using "imaginal disc-derived wing vein specification" => cdef(GO:0007389, [OBO_REL:results_in_specification_of=cdef(FBbt:00001761, [OBO_REL:derives_from=cdef(MA:0000067, [OBO_REL:part_of=FBbt:00004729])])]) [-4] ! parse: GO:0007474 using "imaginal disc-derived wing vein specification" => cdef(GO:0007389, [OBO_REL:results_in_specification_of=cdef(FBbt:00001761, [OBO_REL:derives_from=cdef(ZFA:0000082, [OBO_REL:part_of=FBbt:00004729])])]) [-4] ! parse: GO:0007474 using "wing vein specification" => cdef(GO:0007389, [OBO_REL:results_in_specification_of=FBbt:00004751]) [-2] ! parse: GO:0007474 using "wing vein specification" => cdef(GO:0007389, [OBO_REL:results_in_specification_of=MA:0000067, OBO_REL:unfolds_in=FBbt:00004729]) [-3] ! parse: GO:0007474 using "wing vein specification" => cdef(GO:0007389, [OBO_REL:results_in_specification_of=ZFA:0000082, OBO_REL:unfolds_in=FBbt:00004729]) [-3] ! parse: GO:0007474 using "wing vein specification" => cdef(GO:0007389, [OBO_REL:results_in_specification_of=cdef(MA:0000067, [OBO_REL:part_of=FBbt:00004729])]) [-3] ! parse: GO:0007474 using "wing vein specification" => cdef(GO:0007389, [OBO_REL:results_in_specification_of=cdef(ZFA:0000082, [OBO_REL:part_of=FBbt:00004729])]) [-3] ! no existing xp def ! def: "The regionalization process by which the area of a imaginal disc-derived wing that will form a wing vein is specified." ! PROPOSED: pattern specification process that OBO_REL:results_in_specification_of wing vein [cdef(GO:0007389, [OBO_REL:results_in_specification_of=FBbt:00004751])] [Term] id: GO:0007474 ! imaginal disc-derived wing vein specification intersection_of: GO:0007389 ! pattern specification process intersection_of: OBO_REL:results_in_specification_of FBbt:00004751 ! wing vein ! seconds spent parsing GO:0007474: 28.25 ! parse: GO:0007476 using "imaginal disc-derived wing morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(- derived wing, anatomy), OBO_REL:unfolds_in=FBbt:00001761]) [-16] ! parse: GO:0007476 using "imaginal disc-derived wing morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=cdef(FBbt:00001761, [OBO_REL:derives_from=FBbt:00004729])]) [-3] ! parse: GO:0007476 using "wing morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00004729]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of the imaginal disc-derived wing are generated and organized. Morphogenesis pertains to the creation of form. The wing is an appendage modified for flying." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of wing [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00004729])] [Term] id: GO:0007476 ! imaginal disc-derived wing morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of FBbt:00004729 ! wing ! seconds spent parsing GO:0007476: 19.37 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0007477 using "notum development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00004580]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the dorsal part of the body over time, from its formation to the mature structure." ! PROPOSED: developmental process that results_in_complete_developmental_of mesothoracic tergum [cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00004580])] [Term] id: GO:0007477 ! notum development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of FBbt:00004580 ! mesothoracic tergum synonym: "mesothoracic tergum development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0007477: 4.64 ! parse: GO:0007478 using "leg disc metamorphosis" => cdef(GO:0007552, [OBO_REL:results_in_developmental_progression_of=FBbt:00001780]) [-2] ! parse: GO:0007478 using "leg disc metamorphosis" => cdef(GO:0007552, [OBO_REL:results_in_developmental_progression_of=anon(disc, anatomy), OBO_REL:unfolds_in=FBbt:00004640]) [-6] ! parse: GO:0007478 using "leg disc metamorphosis" => cdef(GO:0007552, [OBO_REL:results_in_developmental_progression_of=anon(disc, anatomy), OBO_REL:unfolds_in=MA:0000047]) [-6] ! parse: GO:0007478 using "leg disc morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00001780]) [-2] ! parse: GO:0007478 using "leg disc morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(disc, anatomy), OBO_REL:unfolds_in=FBbt:00004640]) [-6] ! parse: GO:0007478 using "leg disc morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(disc, anatomy), OBO_REL:unfolds_in=MA:0000047]) [-6] ! no existing xp def ! def: "The process by which the anatomical structures derived from the leg disc are generated and organized. Morphogenesis pertains to the creation of form. This includes the transformation of a leg imaginal disc from a monolayered epithelium in the larvae of holometabolous insects into recognizable adult structures including the leg, coxa and ventral thoracic pleura." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of ventral thoracic disc [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00001780])] [Term] id: GO:0007478 ! leg disc morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of FBbt:00001780 ! ventral thoracic disc synonym: "ventral thoracic disc anatomical structure morphogenesis" EXACT [OBOL:automatic] synonym: "ventral thoracic disc morphogenesis" EXACT [OBOL:automatic] ! seconds spent parsing GO:0007478: 12.66 ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0007479 using "leg disc proximal/distal pattern formation" => cdef(GO:0007389, [OBO_REL:results_in_developmental_progression_of=anon(disc proximal/distal, anatomy), OBO_REL:unfolds_in=FBbt:00004640]) [-22] ! parse: GO:0007479 using "leg disc proximal/distal pattern formation" => cdef(GO:0007389, [OBO_REL:results_in_developmental_progression_of=anon(disc proximal/distal, anatomy), OBO_REL:unfolds_in=MA:0000047]) [-22] ! parse: GO:0007479 using "leg disc proximal/distal pattern formation" => cdef(GO:0007389, [OBO_REL:results_in_developmental_progression_of=anon(proximal/distal, anatomy), OBO_REL:unfolds_in=FBbt:00001780]) [-17] ! parse: GO:0007479 using "leg disc proximal/distal pattern formation" => cdef(GO:0009954, [OBO_REL:results_in_developmental_progression_of=FBbt:00001780]) [-2] ! parse: GO:0007479 using "leg disc proximal/distal pattern formation" => cdef(GO:0009954, [OBO_REL:results_in_developmental_progression_of=anon(disc, anatomy), OBO_REL:unfolds_in=FBbt:00004640]) [-6] ! parse: GO:0007479 using "leg disc proximal/distal pattern formation" => cdef(GO:0009954, [OBO_REL:results_in_developmental_progression_of=anon(disc, anatomy), OBO_REL:unfolds_in=MA:0000047]) [-6] ! parse: GO:0007479 using "leg disc proximal/distal pattern formation" => cdef(GO:0009954, [OBO_REL:results_in_patterning_for=FBbt:00001780]) [-2] ! parse: GO:0007479 using "leg disc proximal/distal pattern formation" => cdef(GO:0009954, [OBO_REL:unfolds_in=FBbt:00001780]) [-2] ! parse: GO:0007479 using "leg disc proximal/distal pattern formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(disc proximal/distal pattern, anatomy), OBO_REL:unfolds_in=FBbt:00004640]) [-30] ! parse: GO:0007479 using "leg disc proximal/distal pattern formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(disc proximal/distal pattern, anatomy), OBO_REL:unfolds_in=MA:0000047]) [-30] ! parse: GO:0007479 using "leg disc proximal/distal pattern formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(proximal/distal pattern, anatomy), OBO_REL:unfolds_in=FBbt:00001780]) [-25] ! no existing xp def ! def: "The establishment, maintenance and elaboration of the proximal/distal axis of the leg imaginal disc, a precursor to the adult leg." ! PROPOSED: proximal/distal pattern formation that OBO_REL:unfolds_in ventral thoracic disc [cdef(GO:0009954, [OBO_REL:unfolds_in=FBbt:00001780])] [Term] id: GO:0007479 ! leg disc proximal/distal pattern formation intersection_of: GO:0009954 ! proximal/distal pattern formation intersection_of: OBO_REL:unfolds_in FBbt:00001780 ! ventral thoracic disc synonym: "ventral thoracic disc proximal/distal pattern formation" EXACT [OBOL:automatic] ! seconds spent parsing GO:0007479: 7.11 ! parse: GO:0007480 using "imaginal disc-derived leg morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(- derived leg, anatomy), OBO_REL:unfolds_in=FBbt:00001761]) [-15] ! parse: GO:0007480 using "imaginal disc-derived leg morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=cdef(FBbt:00001761, [OBO_REL:derives_from=FBbt:00004640])]) [-3] ! parse: GO:0007480 using "imaginal disc-derived leg morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=cdef(FBbt:00001761, [OBO_REL:derives_from=MA:0000047])]) [-3] ! parse: GO:0007480 using "imaginal disc-derived leg morphogenesis" => cdef(GO:0035110, [OBO_REL:results_in_developmental_progression_of=anon(- derived, anatomy), OBO_REL:unfolds_in=FBbt:00001761]) [-11] ! no existing xp def ! def: "The process by which the anatomical structures of a leg derived from an imaginal disc are generated and organized. Morphogenesis pertains to the creation of form. A leg is a limb on which an animal walks and stands." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of cdef(FBbt:00001761, [OBO_REL:derives_from=MA:0000047]) [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=cdef(FBbt:00001761, [OBO_REL:derives_from=MA:0000047])])] [Term] id: GO:0007480 ! imaginal disc-derived leg morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of imaginal_disc_-_derived_leg synonym: "imaginal disk-derived leg morphogenesis" EXACT [OBOL:automatic] ! seconds spent parsing GO:0007480: 21.66 ! parse: GO:0007481 using "haltere disc metamorphosis" => cdef(GO:0007552, [OBO_REL:results_in_developmental_progression_of=FBbt:00001779]) [-2] ! parse: GO:0007481 using "haltere disc metamorphosis" => cdef(GO:0007552, [OBO_REL:results_in_developmental_progression_of=anon(disc, anatomy), OBO_REL:unfolds_in=FBbt:00004783]) [-6] ! parse: GO:0007481 using "haltere disc morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00001779]) [-2] ! parse: GO:0007481 using "haltere disc morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(disc, anatomy), OBO_REL:unfolds_in=FBbt:00004783]) [-6] ! no existing xp def ! def: "The process by which the anatomical structures derived from the haltere disc are generated and organized. Morphogenesis pertains to the creation of form. This includes the transformation of a haltere imaginal disc from a monolayered epithelium in the larvae of holometabolous insects into the recognizable adult capitellum, pedicel, haltere sclerite, metathoracic spiracle and metanotum." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of dorsal metathoracic disc [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00001779])] [Term] id: GO:0007481 ! haltere disc morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of FBbt:00001779 ! dorsal metathoracic disc synonym: "dorsal metathoracic disc anatomical structure morphogenesis" EXACT [OBOL:automatic] synonym: "dorsal metathoracic disc morphogenesis" EXACT [OBOL:automatic] ! seconds spent parsing GO:0007481: 11.39 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0007482 using "haltere development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00004783]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the haltere over time, from its formation to the mature structure. The haltere is the club-shaped 'balancers' found on each side of the metathorax among the true flies (Diptera). They are the much-modified hind wings." ! PROPOSED: developmental process that results_in_complete_developmental_of haltere [cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00004783])] [Term] id: GO:0007482 ! haltere development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of FBbt:00004783 ! haltere ! seconds spent parsing GO:0007482: 4.63 ! parse: GO:0007483 using "genital disc metamorphosis" => cdef(GO:0007552, [OBO_REL:results_in_developmental_progression_of=FBbt:00001784]) [-2] ! parse: GO:0007483 using "genital disc morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00001784]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures derived from the genital disc are generated and organized. Morphogenesis pertains to the creation of form. This includes the transformation of a genital imaginal disc from a monolayered epithelium in the larvae of holometabolous insects into the recognizable adult genital structures, the anal plates and the hind gut." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of genital disc [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00001784])] [Term] id: GO:0007483 ! genital disc morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of FBbt:00001784 ! genital disc ! seconds spent parsing GO:0007483: 10.14 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0007484 using "imaginal disc-derived genitalia development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(- derived genitalia, anatomy), OBO_REL:unfolds_in=FBbt:00001761]) [-21] ! parse: GO:0007484 using "imaginal disc-derived genitalia development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(FBbt:00001761, [OBO_REL:derives_from=FBbt:00004826])]) [-3] ! parse: GO:0007484 using "imaginal disc-derived genitalia development" => cdef(GO:0048806, [OBO_REL:results_in_developmental_progression_of=anon(- derived, anatomy), OBO_REL:unfolds_in=FBbt:00001761]) [-11] ! no existing xp def ! def: "The process whose specific outcome is the progression of the genitalia over time, from formation as part of the genital disc to the mature structure." ! PROPOSED: developmental process that results_in_complete_developmental_of cdef(FBbt:00001761, [OBO_REL:derives_from=FBbt:00004826]) [cdef(GO:0032502, [results_in_complete_developmental_of=cdef(FBbt:00001761, [OBO_REL:derives_from=FBbt:00004826])])] [Term] id: GO:0007484 ! imaginal disc-derived genitalia development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of imaginal_disc_-_derived_genitalia synonym: "imaginal disk-derived genitalia development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0007484: 23.27 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0007485 using "imaginal disc-derived male genitalia development" => cdef(GO:0030539, [OBO_REL:results_in_developmental_progression_of=anon(- derived, anatomy), OBO_REL:unfolds_in=FBbt:00001761]) [-11] ! parse: GO:0007485 using "imaginal disc-derived male genitalia development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=FBbt:00004826, OBO_REL:unfolds_in=cdef(FBbt:00001761, [OBO_REL:derives_from=cell:male])]) [-4] ! parse: GO:0007485 using "imaginal disc-derived male genitalia development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=FBbt:00004826, OBO_REL:unfolds_in=cdef(cell:male, [OBO_REL:derives_from=FBbt:00001761])]) [-4] ! parse: GO:0007485 using "imaginal disc-derived male genitalia development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00004826, OBO_REL:unfolds_in=cdef(FBbt:00001761, [OBO_REL:derives_from=cell:male])]) [-4] ! parse: GO:0007485 using "imaginal disc-derived male genitalia development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00004826, OBO_REL:unfolds_in=cdef(cell:male, [OBO_REL:derives_from=FBbt:00001761])]) [-4] ! parse: GO:0007485 using "imaginal disc-derived male genitalia development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(- derived male genitalia, anatomy), OBO_REL:unfolds_in=FBbt:00001761]) [-26] ! parse: GO:0007485 using "imaginal disc-derived male genitalia development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(FBbt:00001761, [OBO_REL:derives_from=FBbt:00004828])]) [-3] ! parse: GO:0007485 using "imaginal disc-derived male genitalia development" => cdef(GO:0048806, [OBO_REL:results_in_developmental_progression_of=anon(- derived male, anatomy), OBO_REL:unfolds_in=FBbt:00001761]) [-16] ! parse: GO:0007485 using "imaginal disc-derived male genitalia development" => cdef(GO:0048806, [OBO_REL:results_in_developmental_progression_of=cdef(FBbt:00001761, [OBO_REL:derives_from=cell:male])]) [-3] ! parse: GO:0007485 using "imaginal disc-derived male genitalia development" => cdef(GO:0048806, [OBO_REL:results_in_developmental_progression_of=cdef(cell:male, [OBO_REL:derives_from=FBbt:00001761])]) [-3] ! parse: GO:0007485 using "male genital development (sensu Endopterygota)" => cdef(GO:0007484, [OBO_REL:results_in_developmental_progression_of=cell:male]) [-2] ! parse: GO:0007485 using "male genitalia development (sensu Endopterygota)" => cdef(GO:0007484, [OBO_REL:results_in_developmental_progression_of=cell:male]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the male genitalia over time, from formation as part of the genital disc to the mature structure." ! PROPOSED: imaginal disc-derived genitalia development that OBO_REL:results_in_developmental_progression_of male [cdef(GO:0007484, [OBO_REL:results_in_developmental_progression_of=cell:male])] [Term] id: GO:0007485 ! imaginal disc-derived male genitalia development intersection_of: GO:0007484 ! imaginal disc-derived genitalia development intersection_of: OBO_REL:results_in_developmental_progression_of cell:male ! male synonym: "male imaginal disc-derived genitalia development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0007485: 37.22 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0007486 using "female genital development (sensu Endopterygota)" => cdef(GO:0007484, [OBO_REL:results_in_developmental_progression_of=cell:female]) [-2] ! parse: GO:0007486 using "female genitalia development (sensu Endopterygota)" => cdef(GO:0007484, [OBO_REL:results_in_developmental_progression_of=cell:female]) [-2] ! parse: GO:0007486 using "imaginal disc-derived female genitalia development" => cdef(GO:0030540, [OBO_REL:results_in_developmental_progression_of=anon(- derived, anatomy), OBO_REL:unfolds_in=FBbt:00001761]) [-11] ! parse: GO:0007486 using "imaginal disc-derived female genitalia development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=FBbt:00004826, OBO_REL:unfolds_in=cdef(FBbt:00001761, [OBO_REL:derives_from=cell:female])]) [-4] ! parse: GO:0007486 using "imaginal disc-derived female genitalia development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=FBbt:00004826, OBO_REL:unfolds_in=cdef(cell:female, [OBO_REL:derives_from=FBbt:00001761])]) [-4] ! parse: GO:0007486 using "imaginal disc-derived female genitalia development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00004826, OBO_REL:unfolds_in=cdef(FBbt:00001761, [OBO_REL:derives_from=cell:female])]) [-4] ! parse: GO:0007486 using "imaginal disc-derived female genitalia development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00004826, OBO_REL:unfolds_in=cdef(cell:female, [OBO_REL:derives_from=FBbt:00001761])]) [-4] ! parse: GO:0007486 using "imaginal disc-derived female genitalia development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(- derived female genitalia, anatomy), OBO_REL:unfolds_in=FBbt:00001761]) [-28] ! parse: GO:0007486 using "imaginal disc-derived female genitalia development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(FBbt:00001761, [OBO_REL:derives_from=FBbt:00004827])]) [-3] ! parse: GO:0007486 using "imaginal disc-derived female genitalia development" => cdef(GO:0048806, [OBO_REL:results_in_developmental_progression_of=anon(- derived female, anatomy), OBO_REL:unfolds_in=FBbt:00001761]) [-18] ! parse: GO:0007486 using "imaginal disc-derived female genitalia development" => cdef(GO:0048806, [OBO_REL:results_in_developmental_progression_of=cdef(FBbt:00001761, [OBO_REL:derives_from=cell:female])]) [-3] ! parse: GO:0007486 using "imaginal disc-derived female genitalia development" => cdef(GO:0048806, [OBO_REL:results_in_developmental_progression_of=cdef(cell:female, [OBO_REL:derives_from=FBbt:00001761])]) [-3] ! no existing xp def ! def: "The process whose specific outcome is the progression of the female genitalia over time, from formation as part of the genital disc to the mature structure." ! PROPOSED: imaginal disc-derived genitalia development that OBO_REL:results_in_developmental_progression_of female [cdef(GO:0007484, [OBO_REL:results_in_developmental_progression_of=cell:female])] [Term] id: GO:0007486 ! imaginal disc-derived female genitalia development intersection_of: GO:0007484 ! imaginal disc-derived genitalia development intersection_of: OBO_REL:results_in_developmental_progression_of cell:female ! female synonym: "female imaginal disc-derived genitalia development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0007486: 32.68 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0007487 using "analia development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00004823]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the analia over time, from its formation to the mature structure. The analia is the posterior-most vertral appendage that develops from the genital disc. As in, but not restricted to, the Holometabola (Endopterygota, ncbi_taxonomy_id:33392)." ! PROPOSED: developmental process that results_in_complete_developmental_of analia [cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00004823])] [Term] id: GO:0007487 ! analia development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of FBbt:00004823 ! analia ! seconds spent parsing GO:0007487: 9.56 ! Already have xp for: GO:0007488 histoblast morphogenesis ! CURRENT : anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of histoblast [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=CL:0000373])] ! parse: GO:0007490 using "tergite morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00004476]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of the tergite are generated and organized. Morphogenesis pertains to the creation of form. The tergite is the primary plate or sclerite forming the dorsal surface of any insect body segment." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of tergite [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00004476])] [Term] id: GO:0007490 ! tergite morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of FBbt:00004476 ! tergite ! seconds spent parsing GO:0007490: 5.06 ! parse: GO:0007491 using "sternite morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00004477]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of the sternite are generated and organized. Morphogenesis pertains to the creation of form. The sternite is the plate or sclerite on the underside of a body segment." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of sternite [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00004477])] [Term] id: GO:0007491 ! sternite morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of FBbt:00004477 ! sternite ! seconds spent parsing GO:0007491: 5.07 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0007492 using "endoderm development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00000125]) [-2] ! parse: GO:0007492 using "endoderm development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000017]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the endoderm over time, from its formation to the mature structure. The endoderm is the innermost germ layer that develops into the gastrointestinal tract, the lungs and associated tissues." ! PROPOSED: developmental process that results_in_complete_developmental_of endoderm [cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000017])] [Term] id: GO:0007492 ! endoderm development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of ZFA:0000017 ! endoderm ! seconds spent parsing GO:0007492: 5.28 ! Already have xp for: GO:0007493 endodermal cell fate determination ! CURRENT : cell fate determination that OBO_REL:results_in_determination_to endodermal cell [cdef(GO:0001709, [OBO_REL:results_in_determination_to=CL:0000223])] ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0007494 using "midgut development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00005383]) [-2] ! parse: GO:0007494 using "midgut development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0001564]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the midgut over time, from its formation to the mature structure. The midgut is the middle part of the alimentary canal from the stomach, or entrance of the bile duct, to, or including, the large intestine." ! PROPOSED: developmental process that results_in_complete_developmental_of midgut [cdef(GO:0032502, [results_in_complete_developmental_of=MA:0001564])] [Term] id: GO:0007494 ! midgut development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of MA:0001564 ! midgut ! seconds spent parsing GO:0007494: 5.29 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0007495 using "visceral mesoderm-endoderm interaction involved in midgut development" => cdef(GO:0007494, [OBO_REL:results_in_developmental_progression_of=anon(- endoderm interaction involved in, anatomy), OBO_REL:unfolds_in=FBbt:00000130]) [-36] ! parse: GO:0007495 using "visceral mesoderm-endoderm interaction involved in midgut development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(- endoderm interaction involved in midgut, anatomy), OBO_REL:unfolds_in=FBbt:00000130]) [-43] ! no existing xp def ! def: "The process of cell-cell signaling between visceral mesoderm cells and endoderm cells that is involved in the differentiation of cells in the midgut." ! PROPOSED: midgut development that OBO_REL:results_in_developmental_progression_of anon(- endoderm interaction involved in, anatomy) and OBO_REL:unfolds_in visceral mesoderm [cdef(GO:0007494, [OBO_REL:results_in_developmental_progression_of=anon(- endoderm interaction involved in, anatomy), OBO_REL:unfolds_in=FBbt:00000130])] [Term] id: GO:0007495 ! visceral mesoderm-endoderm interaction involved in midgut development intersection_of: GO:0007494 ! midgut development intersection_of: OBO_REL:results_in_developmental_progression_of anatomy:-_endoderm_interaction_involved_in intersection_of: OBO_REL:unfolds_in FBbt:00000130 ! visceral mesoderm ! seconds spent parsing GO:0007495: 18.52 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0007498 using "mesoderm development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00000126]) [-2] ! parse: GO:0007498 using "mesoderm development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000041]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the mesoderm over time, from its formation to the mature structure. The mesoderm is the middle germ layer that develops into muscle, bone, cartilage, blood and connective tissue." ! PROPOSED: developmental process that results_in_complete_developmental_of mesoderm [cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000041])] [Term] id: GO:0007498 ! mesoderm development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of ZFA:0000041 ! mesoderm ! seconds spent parsing GO:0007498: 5.28 ! No parse for: GO:0007499 ectoderm and mesoderm interaction ! Already have xp for: GO:0007500 mesodermal cell fate determination ! CURRENT : cell fate determination that OBO_REL:results_in_determination_to mesodermal cell [cdef(GO:0001709, [OBO_REL:results_in_determination_to=CL:0000222])] ! Already have xp for: GO:0007501 mesodermal cell fate specification ! CURRENT : cell fate specification that OBO_REL:results_in_specification_of mesodermal cell [cdef(GO:0001708, [OBO_REL:results_in_specification_of=CL:0000222])] ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0007503 using "fat body development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=MA:0000004, OBO_REL:unfolds_in=MA:0000056]) [-3] ! parse: GO:0007503 using "fat body development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00005066]) [-2] ! parse: GO:0007503 using "fat body development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000004, OBO_REL:unfolds_in=MA:0000056]) [-3] ! parse: GO:0007503 using "fat body development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(MA:0000004, [OBO_REL:part_of=MA:0000056])]) [-3] ! no existing xp def ! def: "The process whose specific outcome is the progression of the fat body over time, from its formation to the mature structure. A fat body is an insect gland dorsal to the insect gut, with a function analogous to that of the vertebrate liver. It is a storage organ for fats, glycogen and protein and is a major site of intermediary metabolism." ! PROPOSED: developmental process that results_in_complete_developmental_of fat body [cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00005066])] [Term] id: GO:0007503 ! fat body development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of FBbt:00005066 ! fat body ! seconds spent parsing GO:0007503: 10.55 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0007504 using "larval fat body development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00005711]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the larval fat body over time, from its formation to the mature structure. The larval fat body consists of a bilaterally symmetrical monolayer of cells lying between the gut and the muscles of the body wall. As in other tissues of the larva, the cells of the fat body complete their divisions in the embryo and increase in size and ploidy during larval life." ! PROPOSED: developmental process that results_in_complete_developmental_of larval fat body [cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00005711])] [Term] id: GO:0007504 ! larval fat body development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of FBbt:00005711 ! larval fat body ! seconds spent parsing GO:0007504: 4.79 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0007505 using "adult fat body development" => cdef(GO:0007503, [OBO_REL:results_in_developmental_progression_of=FBbt:00003004]) [-2] ! parse: GO:0007505 using "adult fat body development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=FBbt:00005066, OBO_REL:unfolds_in=FBbt:00003004]) [-3] ! parse: GO:0007505 using "adult fat body development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=MA:0000004, OBO_REL:unfolds_in=cdef(MA:0000056, [OBO_REL:part_of=FBbt:00003004])]) [-4] ! parse: GO:0007505 using "adult fat body development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=cdef(MA:0000004, [OBO_REL:part_of=MA:0000056]), OBO_REL:unfolds_in=FBbt:00003004]) [-4] ! parse: GO:0007505 using "adult fat body development" => cdef(GO:0032502, [and=results_in_complete_developmental_of(MA:0000004)/unfolds_in(MA:0000056), OBO_REL:unfolds_in=FBbt:00003004]) [-3] ! parse: GO:0007505 using "adult fat body development" => cdef(GO:0032502, [and=results_in_developmental_progression_of(MA:0000004)/unfolds_in(MA:0000056), OBO_REL:unfolds_in=FBbt:00003004]) [-3] ! parse: GO:0007505 using "adult fat body development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00003209]) [-2] ! parse: GO:0007505 using "adult fat body development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00005066, OBO_REL:unfolds_in=FBbt:00003004]) [-3] ! parse: GO:0007505 using "adult fat body development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000004, OBO_REL:unfolds_in=cdef(MA:0000056, [OBO_REL:part_of=FBbt:00003004])]) [-4] ! parse: GO:0007505 using "adult fat body development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(FBbt:00005066, [OBO_REL:part_of=FBbt:00003004])]) [-3] ! parse: GO:0007505 using "adult fat body development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(MA:0000004, [OBO_REL:part_of=MA:0000056]), OBO_REL:unfolds_in=FBbt:00003004]) [-4] ! parse: GO:0007505 using "adult fat body development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(cdef(MA:0000004, [OBO_REL:part_of=MA:0000056]), [OBO_REL:part_of=FBbt:00003004])]) [-4] ! no existing xp def ! def: "The process whose specific outcome is the progression of the adult fat body over time, from its formation to the mature structure. Larval fat body cells that remain at eclosion degenerate in the first 2 to 4 days of adult life, leaving behind the smaller cells of the adult fat body." ! PROPOSED: developmental process that results_in_complete_developmental_of adult fat body [cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00003209])] [Term] id: GO:0007505 ! adult fat body development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of FBbt:00003209 ! adult fat body ! seconds spent parsing GO:0007505: 8.61 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0007506 using "gonadal mesoderm development" => cdef(GO:0007498, [OBO_REL:results_in_developmental_progression_of=anon(gonadal, anatomy)]) [-8] ! parse: GO:0007506 using "gonadal mesoderm development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(gonadal mesoderm, anatomy)]) [-17] ! no existing xp def ! def: "The process whose specific outcome is the progression of the gonadal mesoderm over time, from its formation to the mature structure. The gonadal mesoderm is the middle layer of the three primary germ layers of the embryo which will go on to form the gonads of the organism." ! PROPOSED: mesoderm development that OBO_REL:results_in_developmental_progression_of anon(gonadal, anatomy) [cdef(GO:0007498, [OBO_REL:results_in_developmental_progression_of=anon(gonadal, anatomy)])] [Term] id: GO:0007506 ! gonadal mesoderm development intersection_of: GO:0007498 ! mesoderm development intersection_of: OBO_REL:results_in_developmental_progression_of anatomy:gonadal ! seconds spent parsing GO:0007506: 4.46 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0007507 using "cardiac development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(cardiac, anatomy)]) [-8] ! parse: GO:0007507 using "heart development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000072]) [-2] ! parse: GO:0007507 using "heart development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000114]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood." ! PROPOSED: developmental process that results_in_complete_developmental_of heart [cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000114])] [Term] id: GO:0007507 ! heart development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of ZFA:0000114 ! heart ! seconds spent parsing GO:0007507: 9.39 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0007508 using "larval heart development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00005685]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the larval heart over time, from its formation to the mature structure. In Drosophila the larval heart (dorsal vessel) is a continuous tube of mesodormal cells that runs beneath the dorsal midline of the epidermis, divided into an anterior aorta and a posterior heart proper." ! PROPOSED: developmental process that results_in_complete_developmental_of larval heart [cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00005685])] [Term] id: GO:0007508 ! larval heart development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of FBbt:00005685 ! larval heart ! seconds spent parsing GO:0007508: 4.75 ! No parse for: GO:0007509 mesoderm migration ! Already have xp for: GO:0007510 cardioblast cell fate determination ! CURRENT : cell fate determination that OBO_REL:results_in_determination_to cardioblast [cdef(GO:0001709, [OBO_REL:results_in_determination_to=cell:cardioblast])] ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0007512 using "adult cardiac development" => cdef(GO:0007507, [OBO_REL:results_in_developmental_progression_of=FBbt:00003004]) [-2] ! parse: GO:0007512 using "adult cardiac development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(cardiac, anatomy), OBO_REL:unfolds_in=FBbt:00003004]) [-9] ! parse: GO:0007512 using "adult heart development" => cdef(GO:0007507, [OBO_REL:results_in_developmental_progression_of=FBbt:00003004]) [-2] ! parse: GO:0007512 using "adult heart development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=MA:0000072, OBO_REL:unfolds_in=FBbt:00003004]) [-3] ! parse: GO:0007512 using "adult heart development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=ZFA:0000114, OBO_REL:unfolds_in=FBbt:00003004]) [-3] ! parse: GO:0007512 using "adult heart development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00003154]) [-2] ! parse: GO:0007512 using "adult heart development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000072, OBO_REL:unfolds_in=FBbt:00003004]) [-3] ! parse: GO:0007512 using "adult heart development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000114, OBO_REL:unfolds_in=FBbt:00003004]) [-3] ! parse: GO:0007512 using "adult heart development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(MA:0000072, [OBO_REL:part_of=FBbt:00003004])]) [-3] ! parse: GO:0007512 using "adult heart development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(ZFA:0000114, [OBO_REL:part_of=FBbt:00003004])]) [-3] ! no existing xp def ! def: "The process whose specific outcome is the progression of the adult heart over time, from its formation to the mature structure." ! PROPOSED: developmental process that results_in_complete_developmental_of adult heart [cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00003154])] [Term] id: GO:0007512 ! adult heart development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of FBbt:00003154 ! adult heart ! seconds spent parsing GO:0007512: 12.69 ! Already have xp for: GO:0007513 pericardial cell differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of pericardial cell [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000474])] ! Already have xp for: GO:0007514 garland cell differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of garland cell [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000486])] ! No relation defined: results_in_complete_developmental_of ! parse: GO:0007516 using "hemocyte development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00005063]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the hemocyte over time, from its formation to the mature structure. Hemocytes are blood cells associated with a hemocoel (the cavity containing most of the major organs of the arthropod body) which are involved in defense and clotting of hemolymph, but not involved in transport of oxygen." ! PROPOSED: developmental process that results_in_complete_developmental_of hemocyte [cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00005063])] [Term] id: GO:0007516 ! hemocyte development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of FBbt:00005063 ! hemocyte ! seconds spent parsing GO:0007516: 13.43 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0007517 using "muscle development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000015]) [-2] ! parse: GO:0007517 using "muscle development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000548]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work." ! PROPOSED: developmental process that results_in_complete_developmental_of musculature system [cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000548])] [Term] id: GO:0007517 ! muscle development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of ZFA:0000548 ! musculature system synonym: "muscles development" EXACT [OBOL:automatic] synonym: "musculature system development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0007517: 5.32 ! Already have xp for: GO:0007518 myoblast cell fate determination ! CURRENT : cell fate determination that OBO_REL:results_in_determination_to myoblast [cdef(GO:0001709, [OBO_REL:results_in_determination_to=CL:0000056])] ! No parse for: GO:0007520 myoblast fusion ! Already have xp for: GO:0007521 muscle cell fate determination ! CURRENT : cell fate determination that OBO_REL:results_in_determination_to muscle cell [cdef(GO:0001709, [OBO_REL:results_in_determination_to=CL:0000187])] ! No relation defined: results_in_complete_developmental_of ! parse: GO:0007522 using "visceral muscle development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00005070]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the visceral muscle over time, from its formation to the mature structure." ! PROPOSED: developmental process that results_in_complete_developmental_of visceral muscle [cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00005070])] [Term] id: GO:0007522 ! visceral muscle development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of FBbt:00005070 ! visceral muscle ! seconds spent parsing GO:0007522: 4.73 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0007523 using "larval visceral muscle development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00005654]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the larval visceral muscle over time, from its formation to the mature structure." ! PROPOSED: developmental process that results_in_complete_developmental_of larval visceral muscle [cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00005654])] [Term] id: GO:0007523 ! larval visceral muscle development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of FBbt:00005654 ! larval visceral muscle ! seconds spent parsing GO:0007523: 4.82 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0007524 using "adult visceral muscle development" => cdef(GO:0007522, [OBO_REL:results_in_developmental_progression_of=FBbt:00003004]) [-2] ! parse: GO:0007524 using "adult visceral muscle development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=FBbt:00005070, OBO_REL:unfolds_in=FBbt:00003004]) [-3] ! parse: GO:0007524 using "adult visceral muscle development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00003525]) [-2] ! parse: GO:0007524 using "adult visceral muscle development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00005070, OBO_REL:unfolds_in=FBbt:00003004]) [-3] ! parse: GO:0007524 using "adult visceral muscle development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(FBbt:00005070, [OBO_REL:part_of=FBbt:00003004])]) [-3] ! no existing xp def ! def: "The process whose specific outcome is the progression of the adult visceral muscle over time, from its formation to the mature structure." ! PROPOSED: developmental process that results_in_complete_developmental_of adult visceral muscle [cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00003525])] [Term] id: GO:0007524 ! adult visceral muscle development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of FBbt:00003525 ! adult visceral muscle ! seconds spent parsing GO:0007524: 6.77 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0007525 using "somatic muscle development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00005073]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the somatic muscle over time, from its formation to the mature structure." ! PROPOSED: developmental process that results_in_complete_developmental_of somatic muscle [cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00005073])] [Term] id: GO:0007525 ! somatic muscle development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of FBbt:00005073 ! somatic muscle ! seconds spent parsing GO:0007525: 4.75 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0007526 using "larval somatic muscle development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00005650]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the larval somatic muscle over time, from its formation to the mature structure." ! PROPOSED: developmental process that results_in_complete_developmental_of larval somatic muscle [cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00005650])] [Term] id: GO:0007526 ! larval somatic muscle development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of FBbt:00005650 ! larval somatic muscle ! seconds spent parsing GO:0007526: 4.82 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0007527 using "adult somatic muscle development" => cdef(GO:0007525, [OBO_REL:results_in_developmental_progression_of=FBbt:00003004]) [-2] ! parse: GO:0007527 using "adult somatic muscle development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=FBbt:00005073, OBO_REL:unfolds_in=FBbt:00003004]) [-3] ! parse: GO:0007527 using "adult somatic muscle development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00003259]) [-2] ! parse: GO:0007527 using "adult somatic muscle development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00005073, OBO_REL:unfolds_in=FBbt:00003004]) [-3] ! parse: GO:0007527 using "adult somatic muscle development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(FBbt:00005073, [OBO_REL:part_of=FBbt:00003004])]) [-3] ! no existing xp def ! def: "The process whose specific outcome is the progression of the adult somatic muscle over time, from its formation to the mature structure." ! PROPOSED: developmental process that results_in_complete_developmental_of adult somatic muscle [cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00003259])] [Term] id: GO:0007527 ! adult somatic muscle development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of FBbt:00003259 ! adult somatic muscle ! seconds spent parsing GO:0007527: 6.78 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0007528 using "neuromuscular junction development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00005142]) [-2] ! parse: GO:0007528 using "neuromuscular junction development" => cdef(GO:0032502, [results_in_complete_developmental_of=GO:0031594]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the neuromuscular junction over time, from its formation to the mature structure." ! PROPOSED: developmental process that results_in_complete_developmental_of neuromuscular junction [cdef(GO:0032502, [results_in_complete_developmental_of=GO:0031594])] [Term] id: GO:0007528 ! neuromuscular junction development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of GO:0031594 ! neuromuscular junction ! seconds spent parsing GO:0007528: 6.18 ! parse: GO:0007546 using "somatic processes downstream of sex determination signal" => cdef(GO:0007545, [OBO_REL:results_in_developmental_progression_of=anon(somatic, anatomy)]) [-8] ! no existing xp def ! def: "The events determining the somatic sexual phenotype after the initial transmission of that phenotype to soma-specific information pathways." ! PROPOSED: processes downstream of sex determination signal that OBO_REL:results_in_developmental_progression_of anon(somatic, anatomy) [cdef(GO:0007545, [OBO_REL:results_in_developmental_progression_of=anon(somatic, anatomy)])] [Term] id: GO:0007546 ! somatic processes downstream of sex determination signal intersection_of: GO:0007545 ! processes downstream of sex determination signal intersection_of: OBO_REL:results_in_developmental_progression_of anatomy:somatic ! seconds spent parsing GO:0007546: 4.4 ! parse: GO:0007547 using "germ-line processes downstream of sex determination signal" => cdef(GO:0007545, [OBO_REL:results_in_developmental_progression_of=cell:germ_-_line]) [-2] ! no existing xp def ! def: "The events determining the germ-line sexual phenotype after the initial transmission of that phenotype to germ-line-specific information pathways." ! PROPOSED: processes downstream of sex determination signal that OBO_REL:results_in_developmental_progression_of germ-line [cdef(GO:0007545, [OBO_REL:results_in_developmental_progression_of=cell:germ_-_line])] [Term] id: GO:0007547 ! germ-line processes downstream of sex determination signal intersection_of: GO:0007545 ! processes downstream of sex determination signal intersection_of: OBO_REL:results_in_developmental_progression_of cell:germ_-_line ! germ-line ! seconds spent parsing GO:0007547: 9.93 ! parse: GO:0007560 using "imaginal disc metamorphosis" => cdef(GO:0007552, [OBO_REL:results_in_developmental_progression_of=FBbt:00001761]) [-2] ! parse: GO:0007560 using "imaginal disc morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00001761]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures derived from an imaginal disc are generated and organized. Morphogenesis pertains to the creation of form. The imaginal discs are epithelial infoldings in the larvae of holometabolous insects that develop into adult appendages (legs, antennae, wings, etc.) during metamorphosis from larval to adult form." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of imaginal disc [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00001761])] [Term] id: GO:0007560 ! imaginal disc morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of FBbt:00001761 ! imaginal disc synonym: "imaginal disk anatomical structure morphogenesis" EXACT [OBOL:automatic] synonym: "imaginal disk morphogenesis" EXACT [OBOL:automatic] ! seconds spent parsing GO:0007560: 10.15 ! No parse for: GO:0007561 imaginal disc eversion ! No parse for: GO:0007566 embryo implantation ! Already have xp for: GO:0007569 cell aging ! CURRENT : senescence that OBO_REL:part_of cellularization [cdef(GO:0010149, [OBO_REL:part_of=GO:0007349])] ! parse: GO:0007580 using "extrachromosomal circular DNA accumulation during cell ageing" => cdef(GO:0007568, [OBO_REL:results_in_developmental_progression_of=anon(accumulation during cell, anatomy), OBO_REL:unfolds_in=GO:0005727]) [-26] ! parse: GO:0007580 using "extrachromosomal circular DNA accumulation during cell ageing" => cdef(GO:0007569, [OBO_REL:results_in_developmental_progression_of=anon(accumulation during, anatomy), OBO_REL:unfolds_in=GO:0005727]) [-21] ! parse: GO:0007580 using "extrachromosomal circular DNA accumulation during cell aging" => cdef(GO:0007568, [OBO_REL:results_in_developmental_progression_of=anon(accumulation during cell, anatomy), OBO_REL:unfolds_in=GO:0005727]) [-26] ! parse: GO:0007580 using "extrachromosomal circular DNA accumulation during cell aging" => cdef(GO:0007569, [OBO_REL:results_in_developmental_progression_of=anon(accumulation during, anatomy), OBO_REL:unfolds_in=GO:0005727]) [-21] ! no existing xp def ! def: "Increase in abundance, as cells age, of circular DNA molecules that originate in the chromosome but are excised and circularized, often by intramolecular homologous recombination between direct tandem repeats, and replicated independently of chromosomal replication." ! PROPOSED: cell aging that OBO_REL:results_in_developmental_progression_of anon(accumulation during, anatomy) and OBO_REL:unfolds_in extrachromosomal circular DNA [cdef(GO:0007569, [OBO_REL:results_in_developmental_progression_of=anon(accumulation during, anatomy), OBO_REL:unfolds_in=GO:0005727])] [Term] id: GO:0007580 ! extrachromosomal circular DNA accumulation during cell aging intersection_of: GO:0007569 ! cell aging intersection_of: OBO_REL:results_in_developmental_progression_of anatomy:accumulation_during intersection_of: OBO_REL:unfolds_in GO:0005727 ! extrachromosomal circular DNA synonym: "extrachromosomal circular DNA accumulation during cellular senescence" EXACT [OBOL:automatic] synonym: "extrachromosomal circular DNA accumulation during cellularity senescence" EXACT [OBOL:automatic] synonym: "plasmid binding accumulation during cell ageing" EXACT [OBOL:automatic] synonym: "plasmid binding accumulation during cell aging" EXACT [OBOL:automatic] synonym: "plasmid binding accumulation during cellular senescence" EXACT [OBOL:automatic] synonym: "plasmid binding accumulation during cellularity senescence" EXACT [OBOL:automatic] ! seconds spent parsing GO:0007580: 20.89 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0007592 using "protein-based cuticle development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(protein-based cuticle, anatomy)]) [-22] ! parse: GO:0007592 using "protein-based cuticle development" => cdef(GO:0042335, [OBO_REL:results_in_developmental_progression_of=anon(protein-based, anatomy)]) [-14] ! no existing xp def ! def: "Synthesis and deposition of a protein-based noncellular, hardened, or membranous secretion from an epithelial sheet." ! PROPOSED: cuticle development that OBO_REL:results_in_developmental_progression_of anon(protein-based, anatomy) [cdef(GO:0042335, [OBO_REL:results_in_developmental_progression_of=anon(protein-based, anatomy)])] [Term] id: GO:0007592 ! protein-based cuticle development intersection_of: GO:0042335 ! cuticle development intersection_of: OBO_REL:results_in_developmental_progression_of anatomy:protein_-_based synonym: "protein-based cuticle anabolism" EXACT [OBOL:automatic] synonym: "protein-based cuticle biosynthesis" EXACT [OBOL:automatic] synonym: "protein-based cuticle biosynthetic process" EXACT [OBOL:automatic] synonym: "protein-based cuticle formation" EXACT [OBOL:automatic] synonym: "protein-based cuticle synthesis" EXACT [OBOL:automatic] ! seconds spent parsing GO:0007592: 51.56 ! No parse for: GO:0007593 chitin-based cuticle tanning ! No parse for: GO:0007594 puparial adhesion ! No parse for: GO:0007596 blood coagulation ! No parse for: GO:0007597 blood coagulation, intrinsic pathway ! No parse for: GO:0007598 blood coagulation, extrinsic pathway ! No parse for: GO:0007628 adult walking behavior ! No parse for: GO:0007637 proboscis extension reflex ! No parse for: GO:0008033 tRNA processing ! No parse for: GO:0008037 cell recognition ! Already have xp for: GO:0008038 neuron recognition ! CURRENT : cell recognition that OBO_REL:has_agent neuron [cdef(GO:0008037, [OBO_REL:has_agent=CL:0000540])] ! Already have xp for: GO:0008039 synaptic target recognition ! CURRENT : cell recognition that OBO_REL:has_agent synaptic target [cdef(GO:0008037, [OBO_REL:has_agent=cell:synaptic_target])] ! No parse for: GO:0008052 sensory organ boundary specification ! No parse for: GO:0008054 cyclin catabolic process ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0008055 using "ocellus pigment anabolism" => cdef(GO:0046148, [OBO_REL:results_in_creation_of=FBbt:00004505]) [-2] ! parse: GO:0008055 using "ocellus pigment biosynthesis" => cdef(GO:0046148, [OBO_REL:results_in_creation_of=FBbt:00004505]) [-2] ! parse: GO:0008055 using "ocellus pigment biosynthetic process" => cdef(GO:0046148, [OBO_REL:results_in_creation_of=FBbt:00004505]) [-2] ! parse: GO:0008055 using "ocellus pigment formation" => cdef(GO:0046148, [OBO_REL:results_in_creation_of=FBbt:00004505]) [-2] ! parse: GO:0008055 using "ocellus pigment formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(pigment, anatomy), OBO_REL:unfolds_in=FBbt:00004505]) [-9] ! parse: GO:0008055 using "ocellus pigment synthesis" => cdef(GO:0046148, [OBO_REL:results_in_creation_of=FBbt:00004505]) [-2] ! no existing xp def ! def: "The chemical reactions and pathways resulting in the formation of ocellus pigments, any general or particular coloring matter in living organisms, found or utilized in the ocellus, a minute simple eye found in many invertebrates." ! PROPOSED: pigment biosynthetic process that OBO_REL:results_in_creation_of ocellus [cdef(GO:0046148, [OBO_REL:results_in_creation_of=FBbt:00004505])] [Term] id: GO:0008055 ! ocellus pigment biosynthetic process intersection_of: GO:0046148 ! pigment biosynthetic process intersection_of: OBO_REL:results_in_creation_of FBbt:00004505 ! ocellus ! seconds spent parsing GO:0008055: 25.63 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0008056 using "ocellus development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00004505]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the ocellus over time, from its formation to the mature structure. The ocellus is a simple visual organ of insects." ! PROPOSED: developmental process that results_in_complete_developmental_of ocellus [cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00004505])] [Term] id: GO:0008056 ! ocellus development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of FBbt:00004505 ! ocellus ! seconds spent parsing GO:0008056: 4.64 ! parse: GO:0008057 using "eye pigment granule organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0048770, OBO_REL:unfolds_in=FBbt:00004508]) [-3] ! parse: GO:0008057 using "eye pigment granule organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0048770, OBO_REL:unfolds_in=MA:0000261]) [-3] ! parse: GO:0008057 using "eye pigment granule organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0048770, OBO_REL:unfolds_in=ZFA:0000107]) [-3] ! no existing xp def ! def: "A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of intracellular pigment storage granules in the eye. The majority of pigment granules are found in the pigment cells. Smaller numbers are found in other cell types including the photoreceptor cell." ! PROPOSED: cellular component organization and biogenesis that OBO_REL:results_in_structural_change_to pigment granule and OBO_REL:unfolds_in eye [cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0048770, OBO_REL:unfolds_in=ZFA:0000107])] [Term] id: GO:0008057 ! eye pigment granule organization and biogenesis intersection_of: GO:0016043 ! cellular component organization and biogenesis intersection_of: OBO_REL:results_in_structural_change_to GO:0048770 ! pigment granule intersection_of: OBO_REL:unfolds_in ZFA:0000107 ! eye ! seconds spent parsing GO:0008057: 17.29 ! parse: GO:0008058 using "ocellus pigment granule organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0048770, OBO_REL:unfolds_in=FBbt:00004505]) [-3] ! no existing xp def ! def: "A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of intracellular pigment storage granules in the ocellus." ! PROPOSED: cellular component organization and biogenesis that OBO_REL:results_in_structural_change_to pigment granule and OBO_REL:unfolds_in ocellus [cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0048770, OBO_REL:unfolds_in=FBbt:00004505])] [Term] id: GO:0008058 ! ocellus pigment granule organization and biogenesis intersection_of: GO:0016043 ! cellular component organization and biogenesis intersection_of: OBO_REL:results_in_structural_change_to GO:0048770 ! pigment granule intersection_of: OBO_REL:unfolds_in FBbt:00004505 ! ocellus ! seconds spent parsing GO:0008058: 20.22 ! Already have xp for: GO:0008078 mesodermal cell migration ! CURRENT : cell migration that OBO_REL:results_in_movement_of mesodermal cell [cdef(GO:0016477, [OBO_REL:results_in_movement_of=CL:0000222])] ! No parse for: GO:0008088 axon cargo transport ! No parse for: GO:0008103 oocyte microtubule cytoskeleton polarization ! No parse for: GO:0008152 metabolic process ! No parse for: GO:0008206 bile acid metabolic process ! No parse for: GO:0008215 spermine metabolic process ! No parse for: GO:0008216 spermidine metabolic process ! No parse for: GO:0008217 blood pressure regulation ! parse: GO:0008219 using "cell death" => cdef(GO:0016265, [OBO_REL:results_in_developmental_progression_of=CL:0000000]) [-2] ! parse: GO:0008219 using "cell death" => cdef(GO:0016265, [OBO_REL:results_in_developmental_progression_of=ZFA:0009000]) [-2] ! no existing xp def ! def: "The specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death." ! PROPOSED: death that OBO_REL:results_in_developmental_progression_of cell [cdef(GO:0016265, [OBO_REL:results_in_developmental_progression_of=ZFA:0009000])] [Term] id: GO:0008219 ! cell death intersection_of: GO:0016265 ! death intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0009000 ! cell ! seconds spent parsing GO:0008219: 0.02 ! No parse for: GO:0008258 head involution ! parse: GO:0008283 using "cell proliferation" => cdef(ZFA:0000098, [OBO_REL:results_in_division_of=CL:0000000]) [-2] ! no existing xp def ! def: "The multiplication or reproduction of cells, resulting in the rapid expansion of a cell population." ! PROPOSED: proliferative region that OBO_REL:results_in_division_of cell [cdef(ZFA:0000098, [OBO_REL:results_in_division_of=CL:0000000])] [Term] id: GO:0008283 ! cell proliferation intersection_of: ZFA:0000098 ! proliferative region intersection_of: OBO_REL:results_in_division_of CL:0000000 ! cell synonym: "cell cell cycle" EXACT [OBOL:automatic] synonym: "cell cell division" EXACT [OBOL:automatic] synonym: "cell division" EXACT [OBOL:automatic] synonym: "cell proliferative region" EXACT [OBOL:automatic] def: "The creation of two or more CL:0000000 s by division of one CL:0000000" [OBOL:automatic] ! seconds spent parsing GO:0008283: 13.29 ! No parse for: GO:0008286 insulin receptor signaling pathway ! Already have xp for: GO:0008295 spermidine biosynthetic process ! CURRENT : biosynthetic process that OBO_REL:results_in_creation_of spermidine [cdef(GO:0009058, [OBO_REL:results_in_creation_of=cell:spermidine])] ! No parse for: GO:0008298 intracellular mRNA localization ! No parse for: GO:0008302 ring canal formation, actin assembly ! parse: GO:0008333 using "endosome to lysosome transport" => cdef(GO:0006810, [OBO_REL:results_in_transport_from=GO:0005768, OBO_REL:results_in_transport_to=GO:0005764]) [-3] ! parse: GO:0008333 using "endosome to lysosome transport" => cdef(GO:0006810, [and=results_in_transport_of(GO:0005764)/unfolds_in(FBbt:00002690), OBO_REL:unfolds_in=GO:0005768]) [-3] ! no existing xp def ! def: "The directed movement of substances from endosomes to lysosomes." ! PROPOSED: transport that and results_in_transport_of(GO:0005764)/unfolds_in(FBbt:00002690) and OBO_REL:unfolds_in endosome [cdef(GO:0006810, [and=results_in_transport_of(GO:0005764)/unfolds_in(FBbt:00002690), OBO_REL:unfolds_in=GO:0005768])] [Term] id: GO:0008333 ! endosome to lysosome transport intersection_of: GO:0006810 ! transport intersection_of: and results_in_transport_of(GO:0005764)/unfolds_in(FBbt:00002690) intersection_of: OBO_REL:unfolds_in GO:0005768 ! endosome ! seconds spent parsing GO:0008333: 16.87 ! No parse for: GO:0008335 ovarian ring canal stabilization ! No parse for: GO:0008343 adult feeding behavior ! parse: GO:0008344 using "adult locomotory behavior" => cdef(GO:0007610, [OBO_REL:part_of=GO:0040011, OBO_REL:unfolds_in=FBbt:00003004]) [-3] ! parse: GO:0008344 using "adult locomotory behaviour" => cdef(GO:0007610, [OBO_REL:part_of=GO:0040011, OBO_REL:unfolds_in=FBbt:00003004]) [-3] ! no existing xp def ! def: "Locomotory behavior in a fully developed and mature organism." ! PROPOSED: behavior that OBO_REL:part_of locomotion and OBO_REL:unfolds_in adult [cdef(GO:0007610, [OBO_REL:part_of=GO:0040011, OBO_REL:unfolds_in=FBbt:00003004])] [Term] id: GO:0008344 ! adult locomotory behavior intersection_of: GO:0007610 ! behavior intersection_of: OBO_REL:part_of GO:0040011 ! locomotion intersection_of: OBO_REL:unfolds_in FBbt:00003004 ! adult synonym: "imago behavioral response to stimulus during locomotion" EXACT [OBOL:automatic] synonym: "imago behavioral response to stimulus involved in locomotion" EXACT [OBOL:automatic] synonym: "imago behavioral response to stimulus of locomotion" EXACT [OBOL:automatic] synonym: "imago behavioral response to stimulus with locomotion" EXACT [OBOL:automatic] synonym: "imago behavioural response to stimulus during locomotion" EXACT [OBOL:automatic] synonym: "imago behavioural response to stimulus involved in locomotion" EXACT [OBOL:automatic] synonym: "imago behavioural response to stimulus of locomotion" EXACT [OBOL:automatic] synonym: "imago behavioural response to stimulus with locomotion" EXACT [OBOL:automatic] synonym: "imago locomotory behavior" EXACT [OBOL:automatic] synonym: "imago locomotory behavioral response to stimulus" EXACT [OBOL:automatic] synonym: "imago locomotory behaviour" EXACT [OBOL:automatic] synonym: "imago locomotory behavioural response to stimulus" EXACT [OBOL:automatic] ! seconds spent parsing GO:0008344: 27.93 ! No parse for: GO:0008345 larval locomotory behavior ! No parse for: GO:0008346 larval walking behavior ! Already have xp for: GO:0008347 glial cell migration ! CURRENT : cell migration that OBO_REL:results_in_movement_of glial cell [cdef(GO:0016477, [OBO_REL:results_in_movement_of=CL:0000125])] ! Already have xp for: GO:0008354 germ cell migration ! CURRENT : cell migration that OBO_REL:results_in_movement_of germ cell [cdef(GO:0016477, [OBO_REL:results_in_movement_of=CL:0000586])] ! No parse for: GO:0008361 regulation of cell size ! parse: GO:0008362 using "chitin-based embryonic cuticle biosynthetic process" => cdef(GO:0042335, [OBO_REL:results_in_developmental_progression_of=anon(chitin-based embryonic, anatomy)]) [-23] ! parse: GO:0008362 using "embryonic cuticle anabolism (sensu Insecta)" => cdef(GO:0040003, [OBO_REL:part_of=GO:0009790]) [-2] ! parse: GO:0008362 using "embryonic cuticle anabolism (sensu Insecta)" => cdef(GO:0040003, [OBO_REL:results_in_developmental_progression_of=anon(embryonic, anatomy)]) [-10] ! parse: GO:0008362 using "embryonic cuticle biosynthetic process (sensu Insecta)" => cdef(GO:0040003, [OBO_REL:part_of=GO:0009790]) [-2] ! parse: GO:0008362 using "embryonic cuticle biosynthetic process (sensu Insecta)" => cdef(GO:0040003, [OBO_REL:results_in_developmental_progression_of=anon(embryonic, anatomy)]) [-10] ! parse: GO:0008362 using "embryonic cuticle formation (sensu Insecta)" => cdef(GO:0040003, [OBO_REL:part_of=GO:0009790]) [-2] ! parse: GO:0008362 using "embryonic cuticle formation (sensu Insecta)" => cdef(GO:0040003, [OBO_REL:results_in_developmental_progression_of=anon(embryonic, anatomy)]) [-10] ! parse: GO:0008362 using "embryonic cuticle synthesis (sensu Insecta)" => cdef(GO:0040003, [OBO_REL:part_of=GO:0009790]) [-2] ! parse: GO:0008362 using "embryonic cuticle synthesis (sensu Insecta)" => cdef(GO:0040003, [OBO_REL:results_in_developmental_progression_of=anon(embryonic, anatomy)]) [-10] ! no existing xp def ! def: "Synthesis and deposition of a chitin-based embryonic cuticle by the underlying epidermal epithelium. This tough, waterproof layer is essential to provide structural integrity of the larval body." ! PROPOSED: chitin-based cuticle development that OBO_REL:part_of embryonic development [cdef(GO:0040003, [OBO_REL:part_of=GO:0009790])] [Term] id: GO:0008362 ! chitin-based embryonic cuticle biosynthetic process intersection_of: GO:0040003 ! chitin-based cuticle development intersection_of: OBO_REL:part_of GO:0009790 ! embryonic development synonym: "chitin-based cuticle development during embryogenesis" EXACT [OBOL:automatic] synonym: "chitin-based cuticle development during embryonal development" EXACT [OBOL:automatic] synonym: "chitin-based cuticle development during embryonic development" EXACT [OBOL:automatic] synonym: "chitin-based cuticle development involved in embryogenesis" EXACT [OBOL:automatic] synonym: "chitin-based cuticle development involved in embryonal development" EXACT [OBOL:automatic] synonym: "chitin-based cuticle development involved in embryonic development" EXACT [OBOL:automatic] synonym: "chitin-based cuticle development of embryogenesis" EXACT [OBOL:automatic] synonym: "chitin-based cuticle development of embryonal development" EXACT [OBOL:automatic] synonym: "chitin-based cuticle development of embryonic development" EXACT [OBOL:automatic] synonym: "chitin-based cuticle development with embryogenesis" EXACT [OBOL:automatic] synonym: "chitin-based cuticle development with embryonal development" EXACT [OBOL:automatic] synonym: "chitin-based cuticle development with embryonic development" EXACT [OBOL:automatic] synonym: "embryogenesis, chitin-based cuticle development" EXACT [OBOL:automatic] synonym: "embryogenesis, cuticle anabolism (sensu Insecta)" EXACT [OBOL:automatic] synonym: "embryogenesis, cuticle biosynthetic process (sensu Insecta)" EXACT [OBOL:automatic] synonym: "embryogenesis, cuticle formation (sensu Insecta)" EXACT [OBOL:automatic] synonym: "embryogenesis, cuticle synthesis (sensu Insecta)" EXACT [OBOL:automatic] synonym: "embryonal development, chitin-based cuticle development" EXACT [OBOL:automatic] synonym: "embryonal development, cuticle anabolism (sensu Insecta)" EXACT [OBOL:automatic] synonym: "embryonal development, cuticle biosynthetic process (sensu Insecta)" EXACT [OBOL:automatic] synonym: "embryonal development, cuticle formation (sensu Insecta)" EXACT [OBOL:automatic] synonym: "embryonal development, cuticle synthesis (sensu Insecta)" EXACT [OBOL:automatic] synonym: "embryonic chitin-based cuticle development" EXACT [OBOL:automatic] synonym: "embryonic development, chitin-based cuticle development" EXACT [OBOL:automatic] synonym: "embryonic development, cuticle anabolism (sensu Insecta)" EXACT [OBOL:automatic] synonym: "embryonic development, cuticle biosynthetic process (sensu Insecta)" EXACT [OBOL:automatic] synonym: "embryonic development, cuticle formation (sensu Insecta)" EXACT [OBOL:automatic] synonym: "embryonic development, cuticle synthesis (sensu Insecta)" EXACT [OBOL:automatic] def: "A chitin-based cuticle development that is part of a embryogenesis" [OBOL:automatic] ! seconds spent parsing GO:0008362: 67.39 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0008363 using "larval chitin-based cuticle development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(larval chitin-based cuticle, anatomy)]) [-28] ! parse: GO:0008363 using "larval chitin-based cuticle development" => cdef(GO:0040003, [OBO_REL:results_in_developmental_progression_of=anon(larval, anatomy)]) [-7] ! parse: GO:0008363 using "larval chitin-based cuticle development" => cdef(GO:0042335, [OBO_REL:results_in_developmental_progression_of=anon(larval chitin-based, anatomy)]) [-20] ! no existing xp def ! def: "Synthesis and deposition of a chitin-based larval cuticle. The insect larval cuticle is a secretion from epidermal cells that is shed at each molt." ! PROPOSED: chitin-based cuticle development that OBO_REL:results_in_developmental_progression_of anon(larval, anatomy) [cdef(GO:0040003, [OBO_REL:results_in_developmental_progression_of=anon(larval, anatomy)])] [Term] id: GO:0008363 ! larval chitin-based cuticle development intersection_of: GO:0040003 ! chitin-based cuticle development intersection_of: OBO_REL:results_in_developmental_progression_of anatomy:larval ! seconds spent parsing GO:0008363: 25.92 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0008364 using "pupal chitin-based cuticle development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(pupal chitin-based cuticle, anatomy)]) [-27] ! parse: GO:0008364 using "pupal chitin-based cuticle development" => cdef(GO:0040003, [OBO_REL:results_in_developmental_progression_of=anon(pupal, anatomy)]) [-6] ! parse: GO:0008364 using "pupal chitin-based cuticle development" => cdef(GO:0042335, [OBO_REL:results_in_developmental_progression_of=anon(pupal chitin-based, anatomy)]) [-19] ! no existing xp def ! def: "Synthesis and deposition of a chitin-based pupal cuticle. At the end of the prepupal period the insect is covered by the pupal cuticle which continues to be elaborated into the pupal period." ! PROPOSED: chitin-based cuticle development that OBO_REL:results_in_developmental_progression_of anon(pupal, anatomy) [cdef(GO:0040003, [OBO_REL:results_in_developmental_progression_of=anon(pupal, anatomy)])] [Term] id: GO:0008364 ! pupal chitin-based cuticle development intersection_of: GO:0040003 ! chitin-based cuticle development intersection_of: OBO_REL:results_in_developmental_progression_of anatomy:pupal synonym: "pupal cuticle biosynthetic process (sensu Insecta)" EXACT [OBOL:automatic] ! seconds spent parsing GO:0008364: 20.65 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0008365 using "adult chitin-based cuticle development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(chitin-based cuticle, anatomy), OBO_REL:unfolds_in=FBbt:00003004]) [-22] ! parse: GO:0008365 using "adult chitin-based cuticle development" => cdef(GO:0040003, [OBO_REL:results_in_developmental_progression_of=FBbt:00003004]) [-2] ! parse: GO:0008365 using "adult chitin-based cuticle development" => cdef(GO:0042335, [OBO_REL:results_in_developmental_progression_of=anon(chitin-based, anatomy), OBO_REL:unfolds_in=FBbt:00003004]) [-14] ! parse: GO:0008365 using "adult cuticle anabolism (sensu Insecta)" => cdef(GO:0040003, [OBO_REL:results_in_developmental_progression_of=FBbt:00003004]) [-2] ! parse: GO:0008365 using "adult cuticle biosynthetic process (sensu Insecta)" => cdef(GO:0040003, [OBO_REL:results_in_developmental_progression_of=FBbt:00003004]) [-2] ! parse: GO:0008365 using "adult cuticle formation (sensu Insecta)" => cdef(GO:0040003, [OBO_REL:results_in_developmental_progression_of=FBbt:00003004]) [-2] ! parse: GO:0008365 using "adult cuticle synthesis (sensu Insecta)" => cdef(GO:0040003, [OBO_REL:results_in_developmental_progression_of=FBbt:00003004]) [-2] ! no existing xp def ! def: "Synthesis and deposition of the chitin-based cuticle of adults following the apolysis of the pupal cuticle. The adult insect cuticle contains cuticullin, a protein epicuticle and a lamellate procuticle." ! PROPOSED: chitin-based cuticle development that OBO_REL:results_in_developmental_progression_of adult [cdef(GO:0040003, [OBO_REL:results_in_developmental_progression_of=FBbt:00003004])] [Term] id: GO:0008365 ! adult chitin-based cuticle development intersection_of: GO:0040003 ! chitin-based cuticle development intersection_of: OBO_REL:results_in_developmental_progression_of FBbt:00003004 ! adult synonym: "imago chitin-based cuticle development" EXACT [OBOL:automatic] synonym: "imago cuticle anabolism (sensu Insecta)" EXACT [OBOL:automatic] synonym: "imago cuticle biosynthetic process (sensu Insecta)" EXACT [OBOL:automatic] synonym: "imago cuticle formation (sensu Insecta)" EXACT [OBOL:automatic] synonym: "imago cuticle synthesis (sensu Insecta)" EXACT [OBOL:automatic] ! seconds spent parsing GO:0008365: 51.51 ! No parse for: GO:0008366 axon ensheathment ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0008406 using "gonad development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00004858]) [-2] ! parse: GO:0008406 using "gonad development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0002420]) [-2] ! parse: GO:0008406 using "gonad development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000413]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the gonad over time, from its formation to the mature structure. The gonad is an animal organ that produces gametes; in some species it also produces hormones." ! PROPOSED: developmental process that results_in_complete_developmental_of gonad [cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000413])] [Term] id: GO:0008406 ! gonad development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of ZFA:0000413 ! gonad ! seconds spent parsing GO:0008406: 5.94 ! parse: GO:0008407 using "bristle morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00005179]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of the bristle are generated and organized. Morphogenesis pertains to the creation of form." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of macrochaeta [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00005179])] [Term] id: GO:0008407 ! bristle morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of FBbt:00005179 ! macrochaeta synonym: "macrochaeta anatomical structure morphogenesis" EXACT [OBOL:automatic] synonym: "macrochaeta morphogenesis" EXACT [OBOL:automatic] synonym: "setae anatomical structure morphogenesis" EXACT [OBOL:automatic] synonym: "setae morphogenesis" EXACT [OBOL:automatic] ! seconds spent parsing GO:0008407: 5.07 ! parse: GO:0008535 using "cytochrome c oxidase complex assembly" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0045277]) [-2] ! no existing xp def ! def: "The aggregation and bonding together of a set of components to form cytochrome c oxidase, the terminal member of the respiratory chain of the mitochondrion and some aerobic bacteria. Cytochrome c oxidases are multi-subunit enzymes containing from 13 subunits in the mammalian mitochondrial form to 3-4 subunits in the bacterial forms." ! PROPOSED: cellular component assembly that OBO_REL:results_in_creation_of respiratory chain complex IV [cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0045277])] [Term] id: GO:0008535 ! cytochrome c oxidase complex assembly intersection_of: GO:0022607 ! cellular component assembly intersection_of: OBO_REL:results_in_creation_of GO:0045277 ! respiratory chain complex IV synonym: "assembly and maintenance of cytochrome c oxidase complex" EXACT [OBOL:automatic] synonym: "assembly and maintenance of respiratory chain complex IV" EXACT [OBOL:automatic] synonym: "assembly of cytochrome c oxidase complex" EXACT [OBOL:automatic] synonym: "assembly of respiratory chain complex IV" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of cytochrome c oxidase complex" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of respiratory chain complex IV" EXACT [OBOL:automatic] synonym: "biogenesis of cytochrome c oxidase complex" EXACT [OBOL:automatic] synonym: "biogenesis of respiratory chain complex IV" EXACT [OBOL:automatic] synonym: "cell structure assembly of cytochrome c oxidase complex" EXACT [OBOL:automatic] synonym: "cell structure assembly of respiratory chain complex IV" EXACT [OBOL:automatic] synonym: "cellular component assembly of cytochrome c oxidase complex" EXACT [OBOL:automatic] synonym: "cellular component assembly of respiratory chain complex IV" EXACT [OBOL:automatic] synonym: "complex assembly of cytochrome c oxidase complex" EXACT [OBOL:automatic] synonym: "complex assembly of respiratory chain complex IV" EXACT [OBOL:automatic] synonym: "cytochrome c oxidase complex assembly and maintenance" EXACT [OBOL:automatic] synonym: "cytochrome c oxidase complex biogenesis" EXACT [OBOL:automatic] synonym: "cytochrome c oxidase complex biogenesis and assembly" EXACT [OBOL:automatic] synonym: "cytochrome c oxidase complex cell structure assembly" EXACT [OBOL:automatic] synonym: "cytochrome c oxidase complex cellular component assembly" EXACT [OBOL:automatic] synonym: "cytochrome c oxidase complex complex assembly" EXACT [OBOL:automatic] synonym: "cytochrome c oxidase complex formation" EXACT [OBOL:automatic] synonym: "formation of cytochrome c oxidase complex" EXACT [OBOL:automatic] synonym: "formation of respiratory chain complex IV" EXACT [OBOL:automatic] synonym: "respiratory chain complex IV assembly" EXACT [OBOL:automatic] synonym: "respiratory chain complex IV assembly and maintenance" EXACT [OBOL:automatic] synonym: "respiratory chain complex IV biogenesis" EXACT [OBOL:automatic] synonym: "respiratory chain complex IV biogenesis and assembly" EXACT [OBOL:automatic] synonym: "respiratory chain complex IV cell structure assembly" EXACT [OBOL:automatic] synonym: "respiratory chain complex IV cellular component assembly" EXACT [OBOL:automatic] synonym: "respiratory chain complex IV complex assembly" EXACT [OBOL:automatic] synonym: "respiratory chain complex IV formation" EXACT [OBOL:automatic] def: "The aggregation and bonding together of a set of macromolecules to form a cytochrome c oxidase complex" [OBOL:automatic] ! seconds spent parsing GO:0008535: 7.15 ! No parse for: GO:0008543 fibroblast growth factor receptor signaling pathway ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0008544 using "epidermis development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00004993]) [-2] ! parse: GO:0008544 using "epidermis development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000153]) [-2] ! parse: GO:0008544 using "epidermis development" => cdef(GO:0032502, [results_in_complete_developmental_of=PO:0005679]) [-2] ! parse: GO:0008544 using "epidermis development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000105]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the epidermis over time, from its formation to the mature structure. The epidermis is the outer epithelial layer of a plant or animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species." ! PROPOSED: developmental process that results_in_complete_developmental_of epidermis [cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000105])] [Term] id: GO:0008544 ! epidermis development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of ZFA:0000105 ! epidermis ! seconds spent parsing GO:0008544: 6.6 ! parse: GO:0008583 using "mystery cell fate differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(fate, cell), OBO_REL:unfolds_in=FBbt:00004229]) [-6] ! parse: GO:0008583 using "mystery cell fate differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(mystery cell fate, cell)]) [-18] ! no existing xp def ! def: "The process by which an undifferentiated cell acquires the features of a mystery cell. The mystery cells are a precluster of cells that emerge from the compound eye morphogenetic furrow, normally positioned between R3 and R4. They then disappear into the surrounding pool of undifferentiated cells and have no known fate in the mature ommatidium." ! PROPOSED: cell differentiation that OBO_REL:results_in_acquisition_of_features_of anon(fate, cell) and OBO_REL:unfolds_in mystery cell [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(fate, cell), OBO_REL:unfolds_in=FBbt:00004229])] [Term] id: GO:0008583 ! mystery cell fate differentiation intersection_of: GO:0030154 ! cell differentiation intersection_of: OBO_REL:results_in_acquisition_of_features_of cell:fate intersection_of: OBO_REL:unfolds_in FBbt:00004229 ! mystery cell ! seconds spent parsing GO:0008583: 17.69 ! parse: GO:0008586 using "imaginal disc-derived wing vein morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000067, OBO_REL:unfolds_in=cdef(FBbt:00001761, [OBO_REL:derives_from=FBbt:00004729])]) [-4] ! parse: GO:0008586 using "imaginal disc-derived wing vein morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0000082, OBO_REL:unfolds_in=cdef(FBbt:00001761, [OBO_REL:derives_from=FBbt:00004729])]) [-4] ! parse: GO:0008586 using "imaginal disc-derived wing vein morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(- derived wing vein, anatomy), OBO_REL:unfolds_in=FBbt:00001761]) [-21] ! parse: GO:0008586 using "imaginal disc-derived wing vein morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=cdef(FBbt:00001761, [OBO_REL:derives_from=FBbt:00004751])]) [-3] ! parse: GO:0008586 using "imaginal disc-derived wing vein morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=cdef(FBbt:00001761, [OBO_REL:derives_from=cdef(MA:0000067, [OBO_REL:part_of=FBbt:00004729])])]) [-4] ! parse: GO:0008586 using "imaginal disc-derived wing vein morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=cdef(FBbt:00001761, [OBO_REL:derives_from=cdef(ZFA:0000082, [OBO_REL:part_of=FBbt:00004729])])]) [-4] ! parse: GO:0008586 using "wing vein morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00004751]) [-2] ! parse: GO:0008586 using "wing vein morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000067, OBO_REL:unfolds_in=FBbt:00004729]) [-3] ! parse: GO:0008586 using "wing vein morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0000082, OBO_REL:unfolds_in=FBbt:00004729]) [-3] ! parse: GO:0008586 using "wing vein morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=cdef(MA:0000067, [OBO_REL:part_of=FBbt:00004729])]) [-3] ! parse: GO:0008586 using "wing vein morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=cdef(ZFA:0000082, [OBO_REL:part_of=FBbt:00004729])]) [-3] ! no existing xp def ! def: "The process by which anatomical structures of the veins on an imaginal disc-derived wing are generated and organized. Morphogenesis pertains to the creation of form." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of wing vein [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00004751])] [Term] id: GO:0008586 ! imaginal disc-derived wing vein morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of FBbt:00004751 ! wing vein ! seconds spent parsing GO:0008586: 31.62 ! parse: GO:0008587 using "imaginal disc-derived wing margin morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00005378, OBO_REL:unfolds_in=cdef(FBbt:00001761, [OBO_REL:derives_from=FBbt:00004729])]) [-4] ! parse: GO:0008587 using "imaginal disc-derived wing margin morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0000038, OBO_REL:unfolds_in=cdef(FBbt:00001761, [OBO_REL:derives_from=FBbt:00004729])]) [-4] ! parse: GO:0008587 using "imaginal disc-derived wing margin morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(- derived wing margin, anatomy), OBO_REL:unfolds_in=FBbt:00001761]) [-23] ! parse: GO:0008587 using "imaginal disc-derived wing margin morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=cdef(FBbt:00001761, [OBO_REL:derives_from=FBbt:00005378])]) [-3] ! parse: GO:0008587 using "imaginal disc-derived wing margin morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=cdef(FBbt:00001761, [OBO_REL:derives_from=cdef(FBbt:00005378, [OBO_REL:part_of=FBbt:00004729])])]) [-4] ! parse: GO:0008587 using "imaginal disc-derived wing margin morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=cdef(FBbt:00001761, [OBO_REL:derives_from=cdef(ZFA:0000038, [OBO_REL:part_of=FBbt:00004729])])]) [-4] ! parse: GO:0008587 using "wing margin morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00005378]) [-2] ! parse: GO:0008587 using "wing margin morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00005378, OBO_REL:unfolds_in=FBbt:00004729]) [-3] ! parse: GO:0008587 using "wing margin morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0000038, OBO_REL:unfolds_in=FBbt:00004729]) [-3] ! parse: GO:0008587 using "wing margin morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=cdef(FBbt:00005378, [OBO_REL:part_of=FBbt:00004729])]) [-3] ! parse: GO:0008587 using "wing margin morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=cdef(ZFA:0000038, [OBO_REL:part_of=FBbt:00004729])]) [-3] ! no existing xp def ! def: "The process by which the anatomical structures of the imaginal disc-derived wing margin are generated and organized. Morphogenesis pertains to the creation of form. The wing margin is a strip of cells in the third instar disc at the boundary between the presumptive dorsal and ventral surfaces of the wing blade." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of wing margin [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00005378])] [Term] id: GO:0008587 ! imaginal disc-derived wing margin morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of FBbt:00005378 ! wing margin synonym: "margin morphogenesis" EXACT [OBOL:automatic] ! seconds spent parsing GO:0008587: 31.63 ! Already have xp for: GO:0008594 photoreceptor cell morphogenesis ! CURRENT : anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of photoreceptor cell [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=CL:0000210])] ! parse: GO:0008608 using "spindle kinetochore attachment" => cdef(GO:0008150, [OBO_REL:results_in_attachment_of=GO:0005819, OBO_REL:results_in_attachment_of=GO:0000776]) [-3] ! no existing xp def ! def: "The process by which spindle microtubules become physically associated with the proteins making up the kinetochore complex." ! PROPOSED: biological_process that OBO_REL:results_in_attachment_of spindle and OBO_REL:results_in_attachment_of kinetochore [cdef(GO:0008150, [OBO_REL:results_in_attachment_of=GO:0005819, OBO_REL:results_in_attachment_of=GO:0000776])] [Term] id: GO:0008608 ! attachment of spindle microtubules to kinetochore intersection_of: GO:0008150 ! biological_process intersection_of: OBO_REL:results_in_attachment_of GO:0005819 ! spindle intersection_of: OBO_REL:results_in_attachment_of GO:0000776 ! kinetochore synonym: "spindle kinetochore anchoring" EXACT [OBOL:automatic] synonym: "spindle kinetochore motor activity anchoring" EXACT [OBOL:automatic] synonym: "spindle kinetochore motor activity attachment" EXACT [OBOL:automatic] def: "A biological process by which a spindle and a kinetochore become attached" [OBOL:automatic] ! seconds spent parsing GO:0008608: 34.22 ! No parse for: GO:0008635 caspase activation via cytochrome c ! Already have xp for: GO:0008636 caspase activation via phosphorylation ! CURRENT : caspase activation that regulated_by phosphorylation [cdef(GO:0006919, [regulated_by=GO:0016310])] ! No parse for: GO:0009048 dosage compensation, by inactivation of X chromosome ! No parse for: GO:0009081 branched chain family amino acid metabolic process ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0009082 using "branched chain family amino acid formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(branched chain family amino acid, anatomy)]) [-33] ! no existing xp def ! def: "The chemical reactions and pathways resulting in the formation of amino acids containing a branched carbon skeleton, comprising isoleucine, leucine and valine." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of anon(branched chain family amino acid, anatomy) [cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(branched chain family amino acid, anatomy)])] [Term] id: GO:0009082 ! branched chain family amino acid biosynthetic process intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of anatomy:branched_chain_family_amino_acid synonym: "branched chain family amino acid anatomical structure formation" EXACT [OBOL:automatic] synonym: "branched chain family amino acid formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0009082: 22.0 ! No parse for: GO:0009083 branched chain family amino acid catabolic process ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0009252 using "peptidoglycan formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(peptidoglycan, anatomy)]) [-14] ! no existing xp def ! def: "The chemical reactions and pathways resulting in the formation of peptidoglycans, any of a class of glycoconjugates found in bacterial cell walls." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of anon(peptidoglycan, anatomy) [cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(peptidoglycan, anatomy)])] [Term] id: GO:0009252 ! peptidoglycan biosynthetic process intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of anatomy:peptidoglycan synonym: "peptidoglycan anatomical structure formation" EXACT [OBOL:automatic] synonym: "peptidoglycan formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0009252: 29.22 ! No parse for: GO:0009253 peptidoglycan catabolic process ! No parse for: GO:0009254 peptidoglycan turnover ! Already have xp for: GO:0009267 cellular response to starvation ! CURRENT : response to starvation that OBO_REL:part_of cellularization [cdef(GO:0042594, [OBO_REL:part_of=GO:0007349])] ! parse: GO:0009272 using "chitin- and beta-glucan-containing cell wall biogenesis" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0009277]) [-2] ! no existing xp def ! def: "The chemical reactions and pathways resulting in the formation of the chitin- and beta-glucan-containing cell wall." ! PROPOSED: cellular component assembly that OBO_REL:results_in_creation_of chitin- and beta-glucan-containing cell wall [cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0009277])] [Term] id: GO:0009272 ! chitin- and beta-glucan-containing cell wall biogenesis intersection_of: GO:0022607 ! cellular component assembly intersection_of: OBO_REL:results_in_creation_of GO:0009277 ! chitin- and beta-glucan-containing cell wall synonym: "assembly and maintenance of beta-glucan-containing cell wall" EXACT [OBOL:automatic] synonym: "assembly and maintenance of cell wall (sensu Fungi)" EXACT [OBOL:automatic] synonym: "assembly and maintenance of chitin-and beta-glucan-containing cell wall" EXACT [OBOL:automatic] synonym: "assembly of beta-glucan-containing cell wall" EXACT [OBOL:automatic] synonym: "assembly of cell wall (sensu Fungi)" EXACT [OBOL:automatic] synonym: "assembly of chitin-and beta-glucan-containing cell wall" EXACT [OBOL:automatic] synonym: "beta-glucan-containing cell wall assembly" EXACT [OBOL:automatic] synonym: "beta-glucan-containing cell wall assembly and maintenance" EXACT [OBOL:automatic] synonym: "beta-glucan-containing cell wall biogenesis" EXACT [OBOL:automatic] synonym: "beta-glucan-containing cell wall biogenesis and assembly" EXACT [OBOL:automatic] synonym: "beta-glucan-containing cell wall cell structure assembly" EXACT [OBOL:automatic] synonym: "beta-glucan-containing cell wall cellular component assembly" EXACT [OBOL:automatic] synonym: "beta-glucan-containing cell wall complex assembly" EXACT [OBOL:automatic] synonym: "beta-glucan-containing cell wall formation" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of beta-glucan-containing cell wall" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of cell wall (sensu Fungi)" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of chitin-and beta-glucan-containing cell wall" EXACT [OBOL:automatic] synonym: "biogenesis of beta-glucan-containing cell wall" EXACT [OBOL:automatic] synonym: "biogenesis of cell wall (sensu Fungi)" EXACT [OBOL:automatic] synonym: "biogenesis of chitin-and beta-glucan-containing cell wall" EXACT [OBOL:automatic] synonym: "cell structure assembly of beta-glucan-containing cell wall" EXACT [OBOL:automatic] synonym: "cell structure assembly of cell wall (sensu Fungi)" EXACT [OBOL:automatic] synonym: "cell structure assembly of chitin-and beta-glucan-containing cell wall" EXACT [OBOL:automatic] synonym: "cell wall (sensu Fungi) assembly" EXACT [OBOL:automatic] synonym: "cell wall (sensu Fungi) assembly and maintenance" EXACT [OBOL:automatic] synonym: "cell wall (sensu Fungi) biogenesis" EXACT [OBOL:automatic] synonym: "cell wall (sensu Fungi) biogenesis and assembly" EXACT [OBOL:automatic] synonym: "cell wall (sensu Fungi) cell structure assembly" EXACT [OBOL:automatic] synonym: "cell wall (sensu Fungi) cellular component assembly" EXACT [OBOL:automatic] synonym: "cell wall (sensu Fungi) complex assembly" EXACT [OBOL:automatic] synonym: "cell wall (sensu Fungi) formation" EXACT [OBOL:automatic] synonym: "cellular component assembly of beta-glucan-containing cell wall" EXACT [OBOL:automatic] synonym: "cellular component assembly of cell wall (sensu Fungi)" EXACT [OBOL:automatic] synonym: "cellular component assembly of chitin-and beta-glucan-containing cell wall" EXACT [OBOL:automatic] synonym: "chitin-and beta-glucan-containing cell wall assembly" EXACT [OBOL:automatic] synonym: "chitin-and beta-glucan-containing cell wall assembly and maintenance" EXACT [OBOL:automatic] synonym: "chitin-and beta-glucan-containing cell wall biogenesis" EXACT [OBOL:automatic] synonym: "chitin-and beta-glucan-containing cell wall biogenesis and assembly" EXACT [OBOL:automatic] synonym: "chitin-and beta-glucan-containing cell wall cell structure assembly" EXACT [OBOL:automatic] synonym: "chitin-and beta-glucan-containing cell wall cellular component assembly" EXACT [OBOL:automatic] synonym: "chitin-and beta-glucan-containing cell wall complex assembly" EXACT [OBOL:automatic] synonym: "chitin-and beta-glucan-containing cell wall formation" EXACT [OBOL:automatic] synonym: "complex assembly of beta-glucan-containing cell wall" EXACT [OBOL:automatic] synonym: "complex assembly of cell wall (sensu Fungi)" EXACT [OBOL:automatic] synonym: "complex assembly of chitin-and beta-glucan-containing cell wall" EXACT [OBOL:automatic] synonym: "formation of beta-glucan-containing cell wall" EXACT [OBOL:automatic] synonym: "formation of cell wall (sensu Fungi)" EXACT [OBOL:automatic] synonym: "formation of chitin-and beta-glucan-containing cell wall" EXACT [OBOL:automatic] def: "The aggregation and bonding together of a set of macromolecules to form a beta-glucan-containing cell wall" [OBOL:automatic] ! seconds spent parsing GO:0009272: 91.24 ! parse: GO:0009273 using "peptidoglycan-based cell wall biogenesis" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0009274]) [-2] ! no existing xp def ! def: "The chemical reactions and pathways resulting in the formation of the peptidoglycan-based cell wall." ! PROPOSED: cellular component assembly that OBO_REL:results_in_creation_of peptidoglycan-based cell wall [cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0009274])] [Term] id: GO:0009273 ! peptidoglycan-based cell wall biogenesis intersection_of: GO:0022607 ! cellular component assembly intersection_of: OBO_REL:results_in_creation_of GO:0009274 ! peptidoglycan-based cell wall synonym: "assembly and maintenance of cell wall (sensu Bacteria)" EXACT [OBOL:automatic] synonym: "assembly and maintenance of murein sacculus" EXACT [OBOL:automatic] synonym: "assembly and maintenance of peptidoglycan-based cell wall" EXACT [OBOL:automatic] synonym: "assembly of cell wall (sensu Bacteria)" EXACT [OBOL:automatic] synonym: "assembly of murein sacculus" EXACT [OBOL:automatic] synonym: "assembly of peptidoglycan-based cell wall" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of cell wall (sensu Bacteria)" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of murein sacculus" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of peptidoglycan-based cell wall" EXACT [OBOL:automatic] synonym: "biogenesis of cell wall (sensu Bacteria)" EXACT [OBOL:automatic] synonym: "biogenesis of murein sacculus" EXACT [OBOL:automatic] synonym: "biogenesis of peptidoglycan-based cell wall" EXACT [OBOL:automatic] synonym: "cell structure assembly of cell wall (sensu Bacteria)" EXACT [OBOL:automatic] synonym: "cell structure assembly of murein sacculus" EXACT [OBOL:automatic] synonym: "cell structure assembly of peptidoglycan-based cell wall" EXACT [OBOL:automatic] synonym: "cell wall (sensu Bacteria) assembly" EXACT [OBOL:automatic] synonym: "cell wall (sensu Bacteria) assembly and maintenance" EXACT [OBOL:automatic] synonym: "cell wall (sensu Bacteria) biogenesis" EXACT [OBOL:automatic] synonym: "cell wall (sensu Bacteria) biogenesis and assembly" EXACT [OBOL:automatic] synonym: "cell wall (sensu Bacteria) cell structure assembly" EXACT [OBOL:automatic] synonym: "cell wall (sensu Bacteria) cellular component assembly" EXACT [OBOL:automatic] synonym: "cell wall (sensu Bacteria) complex assembly" EXACT [OBOL:automatic] synonym: "cell wall (sensu Bacteria) formation" EXACT [OBOL:automatic] synonym: "cellular component assembly of cell wall (sensu Bacteria)" EXACT [OBOL:automatic] synonym: "cellular component assembly of murein sacculus" EXACT [OBOL:automatic] synonym: "cellular component assembly of peptidoglycan-based cell wall" EXACT [OBOL:automatic] synonym: "complex assembly of cell wall (sensu Bacteria)" EXACT [OBOL:automatic] synonym: "complex assembly of murein sacculus" EXACT [OBOL:automatic] synonym: "complex assembly of peptidoglycan-based cell wall" EXACT [OBOL:automatic] synonym: "formation of cell wall (sensu Bacteria)" EXACT [OBOL:automatic] synonym: "formation of murein sacculus" EXACT [OBOL:automatic] synonym: "formation of peptidoglycan-based cell wall" EXACT [OBOL:automatic] synonym: "murein sacculus assembly" EXACT [OBOL:automatic] synonym: "murein sacculus assembly and maintenance" EXACT [OBOL:automatic] synonym: "murein sacculus biogenesis" EXACT [OBOL:automatic] synonym: "murein sacculus biogenesis and assembly" EXACT [OBOL:automatic] synonym: "murein sacculus cell structure assembly" EXACT [OBOL:automatic] synonym: "murein sacculus cellular component assembly" EXACT [OBOL:automatic] synonym: "murein sacculus complex assembly" EXACT [OBOL:automatic] synonym: "murein sacculus formation" EXACT [OBOL:automatic] synonym: "peptidoglycan-based cell wall assembly" EXACT [OBOL:automatic] synonym: "peptidoglycan-based cell wall assembly and maintenance" EXACT [OBOL:automatic] synonym: "peptidoglycan-based cell wall biogenesis and assembly" EXACT [OBOL:automatic] synonym: "peptidoglycan-based cell wall cell structure assembly" EXACT [OBOL:automatic] synonym: "peptidoglycan-based cell wall cellular component assembly" EXACT [OBOL:automatic] synonym: "peptidoglycan-based cell wall complex assembly" EXACT [OBOL:automatic] synonym: "peptidoglycan-based cell wall formation" EXACT [OBOL:automatic] def: "The aggregation and bonding together of a set of macromolecules to form a cell wall (sensu Bacteria)" [OBOL:automatic] ! seconds spent parsing GO:0009273: 91.16 ! No parse for: GO:0009290 DNA import into cell during transformation ! parse: GO:0009296 using "flagellum biogenesis" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0019861]) [-2] ! no existing xp def ! def: "The assembly of a flagellum. In bacteria, this is a whiplike motility appendage present on the surface of some species; in eukaryotes, flagella are threadlike protoplasmic extensions used to propel flagellates and sperm. Flagella are composed of flagellin and have the same basic structure as cilia but are longer in proportion to the cell and present in much smaller numbers." ! PROPOSED: cellular component assembly that OBO_REL:results_in_creation_of flagellum [cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0019861])] [Term] id: GO:0009296 ! flagellum biogenesis intersection_of: GO:0022607 ! cellular component assembly intersection_of: OBO_REL:results_in_creation_of GO:0019861 ! flagellum synonym: "assembly and maintenance of flagellum" EXACT [OBOL:automatic] synonym: "assembly of flagellum" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of flagellum" EXACT [OBOL:automatic] synonym: "biogenesis of flagellum" EXACT [OBOL:automatic] synonym: "cell structure assembly of flagellum" EXACT [OBOL:automatic] synonym: "cellular component assembly of flagellum" EXACT [OBOL:automatic] synonym: "complex assembly of flagellum" EXACT [OBOL:automatic] synonym: "flagellum assembly" EXACT [OBOL:automatic] synonym: "flagellum assembly and maintenance" EXACT [OBOL:automatic] synonym: "flagellum biogenesis and assembly" EXACT [OBOL:automatic] synonym: "flagellum cell structure assembly" EXACT [OBOL:automatic] synonym: "flagellum cellular component assembly" EXACT [OBOL:automatic] synonym: "flagellum complex assembly" EXACT [OBOL:automatic] synonym: "flagellum formation" EXACT [OBOL:automatic] synonym: "formation of flagellum" EXACT [OBOL:automatic] def: "The aggregation and bonding together of a set of macromolecules to form a flagellum" [OBOL:automatic] ! seconds spent parsing GO:0009296: 10.19 ! No parse for: GO:0009297 pilus biogenesis ! No parse for: GO:0009304 tRNA transcription ! No parse for: GO:0009405 pathogenesis ! Already have xp for: GO:0009553 embryo sac development ! CURRENT : gametophyte development that OBO_REL:results_in_developmental_progression_of female [cdef(GO:0048229, [OBO_REL:results_in_developmental_progression_of=cell:female])] ! Already have xp for: GO:0009554 megasporogenesis ! CURRENT : developmental process that OBO_REL:results_in_developmental_progression_of megaspore [cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=CL:0000250])] ! Already have xp for: GO:0009555 pollen development ! CURRENT : gametophyte development that OBO_REL:results_in_developmental_progression_of male [cdef(GO:0048229, [OBO_REL:results_in_developmental_progression_of=cell:male])] ! No parse for: GO:0009556 microsporogenesis ! Already have xp for: GO:0009557 antipodal cell differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of antipodal cell [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000537])] ! No parse for: GO:0009558 cellularization of the embryo sac ! Already have xp for: GO:0009559 embryo sac central cell differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of embryo sac central [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=cell:embryo_sac_central])] ! Already have xp for: GO:0009560 embryo sac egg cell differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of egg cell [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000254])] ! No parse for: GO:0009561 megagametogenesis ! Already have xp for: GO:0009562 embryo sac nuclear migration ! CURRENT : cell migration that OBO_REL:results_in_movement_of embryo sac nucleus [cdef(GO:0016477, [OBO_REL:results_in_movement_of=cell:embryo_sac_nucleus])] ! Already have xp for: GO:0009563 synergid differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of synergid [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000288])] ! No parse for: GO:0009653 anatomical structure morphogenesis ! parse: GO:0009657 using "plastid organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0009536]) [-2] ! no existing xp def ! def: "A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a plastid." ! PROPOSED: cellular component organization and biogenesis that OBO_REL:results_in_structural_change_to plastid [cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0009536])] [Term] id: GO:0009657 ! plastid organization and biogenesis intersection_of: GO:0016043 ! cellular component organization and biogenesis intersection_of: OBO_REL:results_in_structural_change_to GO:0009536 ! plastid synonym: "plastid organization" EXACT [OBOL:automatic] ! seconds spent parsing GO:0009657: 11.04 ! parse: GO:0009658 using "chloroplast organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0009507]) [-2] ! no existing xp def ! def: "A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the chloroplast." ! PROPOSED: cellular component organization and biogenesis that OBO_REL:results_in_structural_change_to chloroplast [cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0009507])] [Term] id: GO:0009658 ! chloroplast organization and biogenesis intersection_of: GO:0016043 ! cellular component organization and biogenesis intersection_of: OBO_REL:results_in_structural_change_to GO:0009507 ! chloroplast synonym: "chloroplast organization" EXACT [OBOL:automatic] ! seconds spent parsing GO:0009658: 11.06 ! parse: GO:0009659 using "leucoplast organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0009516]) [-2] ! no existing xp def ! def: "A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a leucoplast." ! PROPOSED: cellular component organization and biogenesis that OBO_REL:results_in_structural_change_to leucoplast [cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0009516])] [Term] id: GO:0009659 ! leucoplast organization and biogenesis intersection_of: GO:0016043 ! cellular component organization and biogenesis intersection_of: OBO_REL:results_in_structural_change_to GO:0009516 ! leucoplast synonym: "leucoplast organization" EXACT [OBOL:automatic] ! seconds spent parsing GO:0009659: 11.08 ! parse: GO:0009660 using "amyloplast organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0009501]) [-2] ! no existing xp def ! def: "A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an amyloplast." ! PROPOSED: cellular component organization and biogenesis that OBO_REL:results_in_structural_change_to amyloplast [cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0009501])] [Term] id: GO:0009660 ! amyloplast organization and biogenesis intersection_of: GO:0016043 ! cellular component organization and biogenesis intersection_of: OBO_REL:results_in_structural_change_to GO:0009501 ! amyloplast synonym: "amyloplast organization" EXACT [OBOL:automatic] ! seconds spent parsing GO:0009660: 11.04 ! parse: GO:0009661 using "chromoplast organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0009509]) [-2] ! no existing xp def ! def: "A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the chromoplast." ! PROPOSED: cellular component organization and biogenesis that OBO_REL:results_in_structural_change_to chromoplast [cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0009509])] [Term] id: GO:0009661 ! chromoplast organization and biogenesis intersection_of: GO:0016043 ! cellular component organization and biogenesis intersection_of: OBO_REL:results_in_structural_change_to GO:0009509 ! chromoplast synonym: "chromoplast organization" EXACT [OBOL:automatic] ! seconds spent parsing GO:0009661: 11.05 ! parse: GO:0009662 using "etioplast organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0009513]) [-2] ! no existing xp def ! def: "The assembly and arrangement of the etioplast." ! PROPOSED: cellular component organization and biogenesis that OBO_REL:results_in_structural_change_to etioplast [cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0009513])] [Term] id: GO:0009662 ! etioplast organization and biogenesis intersection_of: GO:0016043 ! cellular component organization and biogenesis intersection_of: OBO_REL:results_in_structural_change_to GO:0009513 ! etioplast synonym: "etioplast organization" EXACT [OBOL:automatic] ! seconds spent parsing GO:0009662: 11.04 ! parse: GO:0009663 using "plasmodesma organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0009506]) [-2] ! parse: GO:0009663 using "plasmodesmata organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0009506]) [-2] ! no existing xp def ! def: "A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a plasmodesma, a fine cytoplasmic channel, found in all higher plants, that connects the cytoplasm of one cell to that of an adjacent cell." ! PROPOSED: cellular component organization and biogenesis that OBO_REL:results_in_structural_change_to plasmodesma [cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0009506])] [Term] id: GO:0009663 ! plasmodesma organization and biogenesis intersection_of: GO:0016043 ! cellular component organization and biogenesis intersection_of: OBO_REL:results_in_structural_change_to GO:0009506 ! plasmodesma synonym: "plasmodesma organization" EXACT [OBOL:automatic] synonym: "plasmodesmata organization" EXACT [OBOL:automatic] ! seconds spent parsing GO:0009663: 16.63 ! parse: GO:0009664 using "cellulose and pectin-containing cell wall organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0009505]) [-2] ! no existing xp def ! def: "A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the cellulose and pectin-containing cell wall; as in, but not restricted to, the flowering plants (Magnoliophyta, ncbi_taxonomy_id:3398)." ! PROPOSED: cellular component organization and biogenesis that OBO_REL:results_in_structural_change_to cellulose and pectin-containing cell wall [cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0009505])] [Term] id: GO:0009664 ! cellulose and pectin-containing cell wall organization and biogenesis intersection_of: GO:0016043 ! cellular component organization and biogenesis intersection_of: OBO_REL:results_in_structural_change_to GO:0009505 ! cellulose and pectin-containing cell wall synonym: "cell wall (sensu Magnoliophyta) organization" EXACT [OBOL:automatic] synonym: "cell wall (sensu Magnoliophyta) organization and biogenesis" EXACT [OBOL:automatic] synonym: "cellulose and pectin-containing cell wall organization" EXACT [OBOL:automatic] ! seconds spent parsing GO:0009664: 38.68 ! No parse for: GO:0009665 plastid inheritance ! parse: GO:0009666 using "plastid outer membrane organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0009527]) [-2] ! parse: GO:0009666 using "plastid outer membrane organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0019867, OBO_REL:unfolds_in=GO:0009536]) [-3] ! parse: GO:0009666 using "plastid outer membrane organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=cdef(GO:0019867, [OBO_REL:part_of=GO:0009536])]) [-3] ! no existing xp def ! def: "A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the outer membrane of a plastid." ! PROPOSED: cellular component organization and biogenesis that OBO_REL:results_in_structural_change_to plastid outer membrane [cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0009527])] [Term] id: GO:0009666 ! plastid outer membrane organization and biogenesis intersection_of: GO:0016043 ! cellular component organization and biogenesis intersection_of: OBO_REL:results_in_structural_change_to GO:0009527 ! plastid outer membrane synonym: "plastid outer membrane organization" EXACT [OBOL:automatic] ! seconds spent parsing GO:0009666: 28.81 ! parse: GO:0009667 using "plastid inner membrane organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0009528]) [-2] ! no existing xp def ! def: "A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the inner membrane of a plastid." ! PROPOSED: cellular component organization and biogenesis that OBO_REL:results_in_structural_change_to plastid inner membrane [cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0009528])] [Term] id: GO:0009667 ! plastid inner membrane organization and biogenesis intersection_of: GO:0016043 ! cellular component organization and biogenesis intersection_of: OBO_REL:results_in_structural_change_to GO:0009528 ! plastid inner membrane synonym: "plastid inner membrane organization" EXACT [OBOL:automatic] ! seconds spent parsing GO:0009667: 22.38 ! parse: GO:0009668 using "plastid membrane organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0016020, OBO_REL:unfolds_in=GO:0009536]) [-3] ! parse: GO:0009668 using "plastid membrane organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0042170]) [-2] ! parse: GO:0009668 using "plastid membrane organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=cdef(GO:0016020, [OBO_REL:part_of=GO:0009536])]) [-3] ! no existing xp def ! def: "A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the membrane of a plastid." ! PROPOSED: cellular component organization and biogenesis that OBO_REL:results_in_structural_change_to plastid membrane [cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0042170])] [Term] id: GO:0009668 ! plastid membrane organization and biogenesis intersection_of: GO:0016043 ! cellular component organization and biogenesis intersection_of: OBO_REL:results_in_structural_change_to GO:0042170 ! plastid membrane synonym: "plastid membrane organization" EXACT [OBOL:automatic] ! seconds spent parsing GO:0009668: 18.95 ! No parse for: GO:0009765 photosynthesis, light harvesting ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0009790 using "embryonal development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(embryonal, anatomy)]) [-10] ! parse: GO:0009790 using "embryonic development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(embryonic, anatomy)]) [-10] ! no existing xp def ! def: "The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant." ! PROPOSED: developmental process that results_in_complete_developmental_of anon(embryonic, anatomy) [cdef(GO:0032502, [results_in_complete_developmental_of=anon(embryonic, anatomy)])] [Term] id: GO:0009790 ! embryonic development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of anatomy:embryonic ! seconds spent parsing GO:0009790: 12.17 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0009792 using "embryonic development ending in birth or egg hatching" => cdef(GO:0009790, [OBO_REL:precedes=cdef(GO:0035188, [OBO_REL:results_in_developmental_progression_of=anon(birth or egg, anatomy)])]) [-14] ! parse: GO:0009792 using "embryonic development ending in birth or egg hatching" => cdef(GO:0035188, [OBO_REL:results_in_developmental_progression_of=anon(embryonic development ending in birth or egg, anatomy)]) [-45] ! parse: GO:0009792 using "embryonic development ending in birth or egg hatching" => cdef(cdef(GO:0032502, [results_in_complete_developmental_of=anon(embryonic, anatomy)]), [OBO_REL:precedes=cdef(GO:0035188, [OBO_REL:results_in_developmental_progression_of=anon(birth or egg, anatomy)])]) [-23] ! parse: GO:0009792 using "embryonic development ending in birth or egg hatching" => cdef(cdef(GO:0035188, [OBO_REL:results_in_developmental_progression_of=anon(development ending in birth or egg, anatomy)]), [OBO_REL:part_of=GO:0009790]) [-36] ! no existing xp def ! def: "The process whose specific outcome is the progression of an embryo over time, from zygote formation until the end of the embryonic life stage. The end of the embryonic life stage is organism-specific and may be somewhat arbitrary; for mammals it is usually considered to be birth, for insects the hatching of the first instar larva from the eggshell." ! PROPOSED: embryonic development that OBO_REL:precedes cdef(GO:0035188, [OBO_REL:results_in_developmental_progression_of=anon(birth or egg, anatomy)]) [cdef(GO:0009790, [OBO_REL:precedes=cdef(GO:0035188, [OBO_REL:results_in_developmental_progression_of=anon(birth or egg, anatomy)])])] [Term] id: GO:0009792 ! embryonic development ending in birth or egg hatching intersection_of: GO:0009790 ! embryonic development intersection_of: OBO_REL:precedes birth_or_egg_hatching synonym: "embryogenesis ending in birth or egg hatching" EXACT [OBOL:automatic] synonym: "embryonal development ending in birth or egg hatching" EXACT [OBOL:automatic] ! seconds spent parsing GO:0009792: 26.58 ! Already have xp for: GO:0009793 embryonic development ending in seed dormancy ! CURRENT : embryonic development that OBO_REL:precedes seed dormancy [cdef(GO:0009790, [OBO_REL:precedes=GO:0010162])] ! Already have xp for: GO:0009794 regulation of progression through embryonic mitotic cell cycle ! CURRENT : biological regulation that OBO_REL:regulates mitotic cell cycle, embryonic [cdef(GO:0065007, [OBO_REL:regulates=GO:0045448])] ! No parse for: GO:0009825 multidimensional cell growth ! No parse for: GO:0009826 unidimensional cell growth ! No parse for: GO:0009827 cellulose and pectin-containing cell wall modification ! No parse for: GO:0009828 cellulose and pectin-containing cell wall loosening ! Already have xp for: GO:0009829 cell wall modification during ripening ! CURRENT : cell wall modification that OBO_REL:part_of ripening [cdef(GO:0042545, [OBO_REL:part_of=GO:0009835])] ! Already have xp for: GO:0009830 cell wall modification during abscission ! CURRENT : cell wall modification that OBO_REL:part_of abscission [cdef(GO:0042545, [OBO_REL:part_of=GO:0009838])] ! Already have xp for: GO:0009831 cellulose and pectin-containing cell wall modification during multidimensional cell growth ! CURRENT : cellulose and pectin-containing cell wall modification that OBO_REL:part_of multidimensional cell growth [cdef(GO:0009827, [OBO_REL:part_of=GO:0009825])] ! parse: GO:0009832 using "cellulose and pectin-containing cell wall biogenesis" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0009505]) [-2] ! no existing xp def ! def: "The chemical reactions and pathways resulting in the formation of the cellulose and pectin-containing cell wall." ! PROPOSED: cellular component assembly that OBO_REL:results_in_creation_of cellulose and pectin-containing cell wall [cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0009505])] [Term] id: GO:0009832 ! cellulose and pectin-containing cell wall biogenesis intersection_of: GO:0022607 ! cellular component assembly intersection_of: OBO_REL:results_in_creation_of GO:0009505 ! cellulose and pectin-containing cell wall synonym: "assembly and maintenance of cell wall (sensu Magnoliophyta)" EXACT [OBOL:automatic] synonym: "assembly and maintenance of cellulose and pectin-containing cell wall" EXACT [OBOL:automatic] synonym: "assembly of cell wall (sensu Magnoliophyta)" EXACT [OBOL:automatic] synonym: "assembly of cellulose and pectin-containing cell wall" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of cell wall (sensu Magnoliophyta)" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of cellulose and pectin-containing cell wall" EXACT [OBOL:automatic] synonym: "biogenesis of cell wall (sensu Magnoliophyta)" EXACT [OBOL:automatic] synonym: "biogenesis of cellulose and pectin-containing cell wall" EXACT [OBOL:automatic] synonym: "cell structure assembly of cell wall (sensu Magnoliophyta)" EXACT [OBOL:automatic] synonym: "cell structure assembly of cellulose and pectin-containing cell wall" EXACT [OBOL:automatic] synonym: "cell wall (sensu Magnoliophyta) assembly" EXACT [OBOL:automatic] synonym: "cell wall (sensu Magnoliophyta) assembly and maintenance" EXACT [OBOL:automatic] synonym: "cell wall (sensu Magnoliophyta) biogenesis" EXACT [OBOL:automatic] synonym: "cell wall (sensu Magnoliophyta) biogenesis and assembly" EXACT [OBOL:automatic] synonym: "cell wall (sensu Magnoliophyta) cell structure assembly" EXACT [OBOL:automatic] synonym: "cell wall (sensu Magnoliophyta) cellular component assembly" EXACT [OBOL:automatic] synonym: "cell wall (sensu Magnoliophyta) complex assembly" EXACT [OBOL:automatic] synonym: "cell wall (sensu Magnoliophyta) formation" EXACT [OBOL:automatic] synonym: "cellular component assembly of cell wall (sensu Magnoliophyta)" EXACT [OBOL:automatic] synonym: "cellular component assembly of cellulose and pectin-containing cell wall" EXACT [OBOL:automatic] synonym: "cellulose and pectin-containing cell wall assembly" EXACT [OBOL:automatic] synonym: "cellulose and pectin-containing cell wall assembly and maintenance" EXACT [OBOL:automatic] synonym: "cellulose and pectin-containing cell wall biogenesis and assembly" EXACT [OBOL:automatic] synonym: "cellulose and pectin-containing cell wall cell structure assembly" EXACT [OBOL:automatic] synonym: "cellulose and pectin-containing cell wall cellular component assembly" EXACT [OBOL:automatic] synonym: "cellulose and pectin-containing cell wall complex assembly" EXACT [OBOL:automatic] synonym: "cellulose and pectin-containing cell wall formation" EXACT [OBOL:automatic] synonym: "complex assembly of cell wall (sensu Magnoliophyta)" EXACT [OBOL:automatic] synonym: "complex assembly of cellulose and pectin-containing cell wall" EXACT [OBOL:automatic] synonym: "formation of cell wall (sensu Magnoliophyta)" EXACT [OBOL:automatic] synonym: "formation of cellulose and pectin-containing cell wall" EXACT [OBOL:automatic] def: "The aggregation and bonding together of a set of macromolecules to form a cell wall (sensu Magnoliophyta)" [OBOL:automatic] ! seconds spent parsing GO:0009832: 91.32 ! No parse for: GO:0009833 cellulose and pectin-containing primary cell wall biogenesis ! No parse for: GO:0009834 cellulose and pectin-containing secondary cell wall biogenesis ! No parse for: GO:0009845 seed germination ! No parse for: GO:0009846 pollen germination ! No parse for: GO:0009859 pollen hydration ! Already have xp for: GO:0009860 pollen tube growth ! CURRENT : growth that OBO_REL:results_in_increase_in_mass_of pollen tube [cdef(GO:0040007, [OBO_REL:results_in_increase_in_mass_of=cell:pollen_tube])] ! Already have xp for: GO:0009865 pollen tube adhesion ! CURRENT : biological adhesion that OBO_REL:results_in_adhesion_to pollen tube [cdef(GO:0022610, [OBO_REL:results_in_adhesion_to=cell:pollen_tube])] ! No parse for: GO:0009875 pollen-pistil interaction ! Already have xp for: GO:0009876 pollen adhesion ! CURRENT : biological adhesion that OBO_REL:results_in_adhesion_to pollen [cdef(GO:0022610, [OBO_REL:results_in_adhesion_to=cell:pollen])] ! No parse for: GO:0009880 embryonic pattern specification ! parse: GO:0009887 using "organ morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=PO:0009008]) [-2] ! parse: GO:0009887 using "organ morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0000496]) [-2] ! no existing xp def ! def: "Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of compound organ [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0000496])] [Term] id: GO:0009887 ! organ morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0000496 ! compound organ synonym: "compound organ anatomical structure morphogenesis" EXACT [OBOL:automatic] synonym: "compound organ morphogenesis" EXACT [OBOL:automatic] ! seconds spent parsing GO:0009887: 6.12 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0009888 using "tissue development" => cdef(GO:0032502, [results_in_complete_developmental_of=PO:0009007]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of a tissue over time, from its formation to the mature structure." ! PROPOSED: developmental process that results_in_complete_developmental_of tissue [cdef(GO:0032502, [results_in_complete_developmental_of=PO:0009007])] [Term] id: GO:0009888 ! tissue development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of PO:0009007 ! tissue ! seconds spent parsing GO:0009888: 8.67 ! No parse for: GO:0009901 anther dehiscence ! No parse for: GO:0009902 chloroplast relocation ! No parse for: GO:0009903 chloroplast avoidance movement ! No parse for: GO:0009904 chloroplast accumulation movement ! No relation defined: results_in_complete_developmental_of ! parse: GO:0009908 using "flower development" => cdef(GO:0032502, [results_in_complete_developmental_of=PO:0009046]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the flower over time, from its formation to the mature structure. The flower is the reproductive structure in a plant, and its development begins with the transition of the vegetative or inflorescence meristem into a floral meristem." ! PROPOSED: developmental process that results_in_complete_developmental_of flower [cdef(GO:0032502, [results_in_complete_developmental_of=PO:0009046])] [Term] id: GO:0009908 ! flower development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of PO:0009046 ! flower ! seconds spent parsing GO:0009908: 4.65 ! Already have xp for: GO:0009912 auditory receptor cell fate commitment ! CURRENT : cell fate commitment that OBO_REL:results_in_commitment_to auditory hair cell [cdef(GO:0045165, [OBO_REL:results_in_commitment_to=CL:0000202])] ! Already have xp for: GO:0009913 epidermal cell differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of epidermal cell [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000362])] ! No parse for: GO:0009915 phloem loading ! Already have xp for: GO:0009920 cell plate formation involved in cellulose and pectin-containing cell wall biogenesis ! CURRENT : cell plate formation that OBO_REL:part_of cellulose and pectin-containing cell wall biogenesis [cdef(GO:0000919, [OBO_REL:part_of=GO:0009832])] ! parse: GO:0009932 using "cell tip growth" => cdef(GO:0040007, [OBO_REL:results_in_increase_in_mass_of=GO:0051286]) [-2] ! no existing xp def ! def: "Growth that occurs specifically at the tip of a cell." ! PROPOSED: growth that OBO_REL:results_in_increase_in_mass_of cell tip [cdef(GO:0040007, [OBO_REL:results_in_increase_in_mass_of=GO:0051286])] [Term] id: GO:0009932 ! cell tip growth intersection_of: GO:0040007 ! growth intersection_of: OBO_REL:results_in_increase_in_mass_of GO:0051286 ! cell tip synonym: "cell end growth" EXACT [OBOL:automatic] synonym: "cell end growth pattern" EXACT [OBOL:automatic] synonym: "cell tip growth pattern" EXACT [OBOL:automatic] ! seconds spent parsing GO:0009932: 12.6 ! parse: GO:0009933 using "meristem structural organization" => cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=PO:0009013]) [-2] ! no existing xp def ! def: "Organization of a region of tissue in a plant that is composed of one or more undifferentiated cells capable of undergoing mitosis and differentiation, thereby effecting growth and development of a plant by giving rise to more meristem or specialized tissue." ! PROPOSED: organization of an anatomical structure that OBO_REL:results_in_developmental_progression_of meristem [cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=PO:0009013])] [Term] id: GO:0009933 ! meristem organization intersection_of: GO:0048532 ! organization of an anatomical structure intersection_of: OBO_REL:results_in_developmental_progression_of PO:0009013 ! meristem ! seconds spent parsing GO:0009933: 18.31 ! parse: GO:0009945 using "radial axis specification" => cdef(GO:0007389, [OBO_REL:results_in_specification_of=MA:0001422, OBO_REL:unfolds_in=ZFA:0000271]) [-3] ! parse: GO:0009945 using "radial axis specification" => cdef(GO:0007389, [OBO_REL:results_in_specification_of=MA:0001422, OBO_REL:unfolds_in=cell:radial]) [-3] ! parse: GO:0009945 using "radial axis specification" => cdef(GO:0007389, [OBO_REL:results_in_specification_of=ZFA:0000092, OBO_REL:unfolds_in=ZFA:0000271]) [-3] ! parse: GO:0009945 using "radial axis specification" => cdef(GO:0007389, [OBO_REL:results_in_specification_of=ZFA:0000092, OBO_REL:unfolds_in=cell:radial]) [-3] ! parse: GO:0009945 using "radial axis specification" => cdef(GO:0007389, [OBO_REL:results_in_specification_of=cdef(MA:0001422, [OBO_REL:part_of=ZFA:0000271])]) [-3] ! parse: GO:0009945 using "radial axis specification" => cdef(GO:0007389, [OBO_REL:results_in_specification_of=cdef(ZFA:0000092, [OBO_REL:part_of=ZFA:0000271])]) [-3] ! parse: GO:0009945 using "radial axis specification" => cdef(GO:0009798, [OBO_REL:results_in_developmental_progression_of=ZFA:0000271]) [-2] ! parse: GO:0009945 using "radial axis specification" => cdef(GO:0009798, [OBO_REL:results_in_developmental_progression_of=cell:radial]) [-2] ! parse: GO:0009945 using "radial axis specification" => cdef(GO:0009798, [OBO_REL:results_in_patterning_for=ZFA:0000271]) [-2] ! parse: GO:0009945 using "radial axis specification" => cdef(GO:0009798, [OBO_REL:results_in_patterning_for=cell:radial]) [-2] ! parse: GO:0009945 using "radial axis specification" => cdef(GO:0009798, [OBO_REL:unfolds_in=ZFA:0000271]) [-2] ! parse: GO:0009945 using "radial axis specification" => cdef(GO:0009798, [OBO_REL:unfolds_in=cell:radial]) [-2] ! no existing xp def ! def: "The establishment, maintenance and elaboration of an axis that initiates at a point and radiates outward from the point." ! PROPOSED: axis specification that OBO_REL:unfolds_in radial [cdef(GO:0009798, [OBO_REL:unfolds_in=cell:radial])] [Term] id: GO:0009945 ! radial axis specification intersection_of: GO:0009798 ! axis specification intersection_of: OBO_REL:unfolds_in cell:radial ! radial synonym: "radial axis determination" EXACT [OBOL:automatic] ! seconds spent parsing GO:0009945: 10.09 ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0009956 using "radial pattern formation" => cdef(GO:0007389, [OBO_REL:results_in_developmental_progression_of=ZFA:0000271]) [-2] ! parse: GO:0009956 using "radial pattern formation" => cdef(GO:0007389, [OBO_REL:results_in_developmental_progression_of=cell:radial]) [-2] ! parse: GO:0009956 using "radial pattern formation" => cdef(GO:0007389, [OBO_REL:results_in_patterning_for=ZFA:0000271]) [-2] ! parse: GO:0009956 using "radial pattern formation" => cdef(GO:0007389, [OBO_REL:results_in_patterning_for=cell:radial]) [-2] ! parse: GO:0009956 using "radial pattern formation" => cdef(GO:0007389, [OBO_REL:unfolds_in=ZFA:0000271]) [-2] ! parse: GO:0009956 using "radial pattern formation" => cdef(GO:0007389, [OBO_REL:unfolds_in=cell:radial]) [-2] ! parse: GO:0009956 using "radial pattern formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(pattern, anatomy), OBO_REL:unfolds_in=ZFA:0000271]) [-9] ! parse: GO:0009956 using "radial pattern formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(pattern, anatomy), OBO_REL:unfolds_in=cell:radial]) [-9] ! no existing xp def ! def: "The regionalization process that results in defined areas around a point in which specific types of cell differentiation will occur." ! PROPOSED: pattern specification process that OBO_REL:unfolds_in radial [cdef(GO:0007389, [OBO_REL:unfolds_in=cell:radial])] [Term] id: GO:0009956 ! radial pattern formation intersection_of: GO:0007389 ! pattern specification process intersection_of: OBO_REL:unfolds_in cell:radial ! radial synonym: "radial pattern biosynthesis" EXACT [OBOL:automatic] synonym: "radial pattern specification process" EXACT [OBOL:automatic] ! seconds spent parsing GO:0009956: 6.84 ! Already have xp for: GO:0009957 epidermal cell fate specification ! CURRENT : cell fate specification that OBO_REL:results_in_specification_of epidermal cell [cdef(GO:0001708, [OBO_REL:results_in_specification_of=CL:0000362])] ! No parse for: GO:0009958 positive gravitropism ! No parse for: GO:0009959 negative gravitropism ! No relation defined: results_in_complete_developmental_of ! parse: GO:0009960 using "endosperm development" => cdef(GO:0032502, [results_in_complete_developmental_of=PO:0009089]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the endosperm over time, from its formation to the mature structure. The endosperm is formed during fertilization and provides nutrients to the developing embryo." ! PROPOSED: developmental process that results_in_complete_developmental_of endosperm [cdef(GO:0032502, [results_in_complete_developmental_of=PO:0009089])] [Term] id: GO:0009960 ! endosperm development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of PO:0009089 ! endosperm ! seconds spent parsing GO:0009960: 4.65 ! parse: GO:0009965 using "leaf morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=PO:0009025]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of the leaf are generated and organized. Morphogenesis pertains to the creation of form." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of leaf [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=PO:0009025])] [Term] id: GO:0009965 ! leaf morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of PO:0009025 ! leaf ! seconds spent parsing GO:0009965: 5.08 ! No parse for: GO:0009970 cellular response to sulfate starvation ! Already have xp for: GO:0009987 cellular process ! CURRENT : biological_process that OBO_REL:part_of cellularization [cdef(GO:0008150, [OBO_REL:part_of=GO:0007349])] ! parse: GO:0009988 using "cell-cell recognition" => cdef(GO:0008037, [OBO_REL:has_agent=CL:0000000, OBO_REL:has_agent=CL:0000000]) [-3] ! parse: GO:0009988 using "cell-cell recognition" => cdef(GO:0008037, [OBO_REL:has_agent=CL:0000000, OBO_REL:has_agent=ZFA:0009000]) [-3] ! parse: GO:0009988 using "cell-cell recognition" => cdef(GO:0008037, [OBO_REL:has_agent=ZFA:0009000, OBO_REL:has_agent=CL:0000000]) [-3] ! parse: GO:0009988 using "cell-cell recognition" => cdef(GO:0008037, [OBO_REL:has_agent=ZFA:0009000, OBO_REL:has_agent=ZFA:0009000]) [-3] ! no existing xp def ! def: "Cell recognition between cells, usually involving the formation of specialized cell junctions." ! PROPOSED: cell recognition that OBO_REL:has_agent cell and OBO_REL:has_agent cell [cdef(GO:0008037, [OBO_REL:has_agent=ZFA:0009000, OBO_REL:has_agent=ZFA:0009000])] [Term] id: GO:0009988 ! cell-cell recognition intersection_of: GO:0008037 ! cell recognition intersection_of: OBO_REL:has_agent ZFA:0009000 ! cell intersection_of: OBO_REL:has_agent ZFA:0009000 ! cell def: "cell recognition Cell recognition that involves the interaction of a ZFA:0009000 with a ZFA:0009000" [OBOL:automatic] ! seconds spent parsing GO:0009988: 12.21 ! No parse for: GO:0009989 cell-matrix recognition ! Already have xp for: GO:0009992 cellular osmoregulation ! CURRENT : osmoregulation that OBO_REL:part_of cellularization [cdef(GO:0018987, [OBO_REL:part_of=GO:0007349])] ! Already have xp for: GO:0009994 oocyte differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of oocyte [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000023])] ! No parse for: GO:0009995 soluble molecule recognition ! Already have xp for: GO:0010001 glial cell differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of glial cell [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000125])] ! Already have xp for: GO:0010002 cardioblast differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of cardioblast [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=cell:cardioblast])] ! No parse for: GO:0010014 meristem initiation ! parse: GO:0010015 using "root morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=PO:0009005]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of roots are generated and organized. Morphogenesis pertains to the creation of form. The root is the usually underground part of a seed plant body that originates from the hypocotyl, functions as an organ of absorption, aeration, and food storage or as a means of anchorage and support." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of root [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=PO:0009005])] [Term] id: GO:0010015 ! root morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of PO:0009005 ! root ! seconds spent parsing GO:0010015: 5.06 ! parse: GO:0010016 using "shoot morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=PO:0009006]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of the shoot are generated and organized. Morphogenesis pertains to the creation of form. The shoot is the part of a seed plant body that is usually above ground." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of shoot [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=PO:0009006])] [Term] id: GO:0010016 ! shoot morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of PO:0009006 ! shoot ! seconds spent parsing GO:0010016: 5.08 ! No parse for: GO:0010019 chloroplast-nucleus signaling pathway ! parse: GO:0010020 using "chloroplast fission" => cdef(GO:0009987, [OBO_REL:results_in_division_of=GO:0009507]) [-2] ! no existing xp def ! def: "The division of a chloroplast within a cell to form two or more separate chloroplast compartments. This division occurs independently of mitosis." ! PROPOSED: cellular process that OBO_REL:results_in_division_of chloroplast [cdef(GO:0009987, [OBO_REL:results_in_division_of=GO:0009507])] [Term] id: GO:0010020 ! chloroplast fission intersection_of: GO:0009987 ! cellular process intersection_of: OBO_REL:results_in_division_of GO:0009507 ! chloroplast def: "The creation of two or more GO:0009507 s by division of one GO:0009507" [OBOL:automatic] ! seconds spent parsing GO:0010020: 14.72 ! No parse for: GO:0010022 meristem determinacy ! Already have xp for: GO:0010026 trichome differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of trichome [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000282])] ! parse: GO:0010027 using "thylakoid membrane organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0016020, OBO_REL:unfolds_in=GO:0009579]) [-3] ! parse: GO:0010027 using "thylakoid membrane organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0042651]) [-2] ! parse: GO:0010027 using "thylakoid membrane organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=cdef(GO:0016020, [OBO_REL:part_of=GO:0009579])]) [-3] ! no existing xp def ! def: "A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the thylakoid membrane." ! PROPOSED: cellular component organization and biogenesis that OBO_REL:results_in_structural_change_to thylakoid membrane [cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0042651])] [Term] id: GO:0010027 ! thylakoid membrane organization and biogenesis intersection_of: GO:0016043 ! cellular component organization and biogenesis intersection_of: OBO_REL:results_in_structural_change_to GO:0042651 ! thylakoid membrane synonym: "thylakoid membrane organization" EXACT [OBOL:automatic] ! seconds spent parsing GO:0010027: 18.97 ! Already have xp for: GO:0010032 meiotic chromosome condensation ! CURRENT : chromosome condensation that OBO_REL:part_of meiosis [cdef(GO:0030261, [OBO_REL:part_of=GO:0007126])] ! No parse for: GO:0010047 fruit dehiscence ! No parse for: GO:0010051 vascular tissue pattern formation (sensu Tracheophyta) ! Already have xp for: GO:0010052 guard cell differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of guard cell [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000292])] ! parse: GO:0010053 using "root epidermal cell differentiation" => cdef(GO:0009913, [OBO_REL:results_in_acquisition_of_features_of=anon(root, cell)]) [-5] ! parse: GO:0010053 using "root epidermal cell differentiation" => cdef(GO:0009913, [OBO_REL:results_in_developmental_progression_of=PO:0009005]) [-2] ! parse: GO:0010053 using "root epidermal cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000362, OBO_REL:unfolds_in=PO:0009005]) [-3] ! parse: GO:0010053 using "root epidermal cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(root epidermal, cell)]) [-15] ! parse: GO:0010053 using "root epidermal cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(root epidermal cell, cell)]) [-20] ! no existing xp def ! def: "The process whereby a relatively unspecialized cell in the root epidermis acquires the specialized features of a trichoblast or atrichoblast." ! PROPOSED: epidermal cell differentiation that OBO_REL:results_in_developmental_progression_of root [cdef(GO:0009913, [OBO_REL:results_in_developmental_progression_of=PO:0009005])] [Term] id: GO:0010053 ! root epidermal cell differentiation intersection_of: GO:0009913 ! epidermal cell differentiation intersection_of: OBO_REL:results_in_developmental_progression_of PO:0009005 ! root ! seconds spent parsing GO:0010053: 14.25 ! Already have xp for: GO:0010054 trichoblast differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of trichoblast [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000299])] ! Already have xp for: GO:0010055 atrichoblast differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of atrichoblast [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000332])] ! Already have xp for: GO:0010056 atrichoblast fate specification ! CURRENT : cell fate specification that OBO_REL:results_in_specification_of atrichoblast [cdef(GO:0001708, [OBO_REL:results_in_specification_of=CL:0000332])] ! Already have xp for: GO:0010057 trichoblast fate specification ! CURRENT : cell fate specification that OBO_REL:results_in_specification_of trichoblast [cdef(GO:0001708, [OBO_REL:results_in_specification_of=CL:0000299])] ! parse: GO:0010064 using "embryonic shoot morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(embryonic shoot, anatomy)]) [-16] ! parse: GO:0010064 using "embryonic shoot morphogenesis" => cdef(GO:0010016, [OBO_REL:part_of=GO:0009790]) [-2] ! parse: GO:0010064 using "embryonic shoot morphogenesis" => cdef(GO:0010016, [OBO_REL:results_in_developmental_progression_of=anon(embryonic, anatomy)]) [-10] ! parse: GO:0010064 using "embryonic shoot morphogenesis" => cdef(cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=PO:0009006]), [OBO_REL:part_of=GO:0009790]) [-3] ! no existing xp def ! def: "The process by which the anatomical structures of embryonic shoot are generated and organized. Morphogenesis pertains to the creation of form." ! PROPOSED: shoot morphogenesis that OBO_REL:part_of embryonic development [cdef(GO:0010016, [OBO_REL:part_of=GO:0009790])] [Term] id: GO:0010064 ! embryonic shoot morphogenesis intersection_of: GO:0010016 ! shoot morphogenesis intersection_of: OBO_REL:part_of GO:0009790 ! embryonic development synonym: "embryogenesis, shoot morphogenesis" EXACT [OBOL:automatic] synonym: "embryonal development, shoot morphogenesis" EXACT [OBOL:automatic] synonym: "embryonic development, shoot morphogenesis" EXACT [OBOL:automatic] def: "A shoot morphogenesis that is part of a embryogenesis" [OBOL:automatic] ! seconds spent parsing GO:0010064: 4.5 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0010065 using "primary meristem histogenesis" => cdef(GO:0009888, [OBO_REL:results_in_developmental_progression_of=anon(primary meristem, anatomy)]) [-17] ! parse: GO:0010065 using "primary meristem tissue development" => cdef(GO:0009888, [OBO_REL:results_in_developmental_progression_of=anon(primary meristem, anatomy)]) [-17] ! parse: GO:0010065 using "primary meristem tissue development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(primary meristem tissue, anatomy)]) [-24] ! no existing xp def ! def: "The process whose specific outcome is the progression of primary meristem over time, from formation to the mature structure, as it occurs during plant embryogenesis. The primary meristem tissue is the protoderm, ground meristem and procambium." ! PROPOSED: tissue development that OBO_REL:results_in_developmental_progression_of anon(primary meristem, anatomy) [cdef(GO:0009888, [OBO_REL:results_in_developmental_progression_of=anon(primary meristem, anatomy)])] [Term] id: GO:0010065 ! primary meristem tissue development intersection_of: GO:0009888 ! tissue development intersection_of: OBO_REL:results_in_developmental_progression_of anatomy:primary_meristem ! seconds spent parsing GO:0010065: 8.72 ! parse: GO:0010067 using "procambium histogenesis" => cdef(GO:0009888, [OBO_REL:results_in_developmental_progression_of=PO:0006074]) [-2] ! no existing xp def ! def: "The formation of the primary meristem or meristematic tissue that gives rise to the primary vascular tissue." ! PROPOSED: tissue development that OBO_REL:results_in_developmental_progression_of procambium [cdef(GO:0009888, [OBO_REL:results_in_developmental_progression_of=PO:0006074])] [Term] id: GO:0010067 ! procambium histogenesis intersection_of: GO:0009888 ! tissue development intersection_of: OBO_REL:results_in_developmental_progression_of PO:0006074 ! procambium ! seconds spent parsing GO:0010067: 5.12 ! parse: GO:0010068 using "protoderm histogenesis" => cdef(GO:0009888, [OBO_REL:results_in_developmental_progression_of=PO:0006210]) [-2] ! no existing xp def ! def: "The formation of the primary meristem or meristematic tissue that gives rise to the epidermis." ! PROPOSED: tissue development that OBO_REL:results_in_developmental_progression_of protoderm [cdef(GO:0009888, [OBO_REL:results_in_developmental_progression_of=PO:0006210])] [Term] id: GO:0010068 ! protoderm histogenesis intersection_of: GO:0009888 ! tissue development intersection_of: OBO_REL:results_in_developmental_progression_of PO:0006210 ! protoderm ! seconds spent parsing GO:0010068: 5.06 ! parse: GO:0010069 using "zygote asymmetric cytokinesis in the embryo sac" => cdef(GO:0008356, [OBO_REL:unfolds_in=cell:embryo_sac, OBO_REL:unfolds_in=CL:0000365]) [-3] ! parse: GO:0010069 using "zygote asymmetric cytokinesis in the embryo sac" => cdef(GO:0008356, [OBO_REL:unfolds_in=cell:embryo_sac, OBO_REL:unfolds_in=PO:0000423]) [-3] ! parse: GO:0010069 using "zygote asymmetric cytokinesis in the embryo sac" => cdef(GO:0010070, [OBO_REL:unfolds_in=cell:embryo_sac]) [-2] ! parse: GO:0010069 using "zygote asymmetric cytokinesis in the embryo sac" => cdef(cdef(GO:0008356, [OBO_REL:results_in_division_of=CL:0000365]), [OBO_REL:unfolds_in=cell:embryo_sac]) [-3] ! no existing xp def ! def: "The division of the zygote in a plane perpendicular to the long axis of the embryo sac to produce a larger basal cell near the micropyle and a small terminal cell close to what was the central cell and is now the developing endosperm." ! PROPOSED: zygote asymmetric cell division that OBO_REL:unfolds_in embryo sac [cdef(GO:0010070, [OBO_REL:unfolds_in=cell:embryo_sac])] [Term] id: GO:0010069 ! zygote asymmetric cytokinesis in the embryo sac intersection_of: GO:0010070 ! zygote asymmetric cell division intersection_of: OBO_REL:unfolds_in cell:embryo_sac ! embryo sac synonym: "zygote asymmetric cell division in embryo sac" EXACT [OBOL:automatic] synonym: "zygote asymmetric cell division in the embryo sac" EXACT [OBOL:automatic] synonym: "zygote asymmetric cell division through the embryo sac" EXACT [OBOL:automatic] synonym: "zygote asymmetrical cell division in embryo sac" EXACT [OBOL:automatic] synonym: "zygote asymmetrical cell division in the embryo sac" EXACT [OBOL:automatic] synonym: "zygote asymmetrical cell division through the embryo sac" EXACT [OBOL:automatic] ! seconds spent parsing GO:0010069: 23.55 ! Already have xp for: GO:0010070 zygote asymmetric cell division ! CURRENT : asymmetric cell division that OBO_REL:results_in_division_of zygote [cdef(GO:0008356, [OBO_REL:results_in_division_of=CL:0000365])] ! parse: GO:0010071 using "root meristem specification" => cdef(GO:0007389, [OBO_REL:results_in_specification_of=PO:0006085]) [-2] ! parse: GO:0010071 using "root meristem specification" => cdef(GO:0007389, [OBO_REL:results_in_specification_of=PO:0009013, OBO_REL:unfolds_in=PO:0009005]) [-3] ! parse: GO:0010071 using "root meristem specification" => cdef(GO:0007389, [OBO_REL:results_in_specification_of=cdef(PO:0009013, [OBO_REL:part_of=PO:0009005])]) [-3] ! no existing xp def ! def: "The specification of a meristem which will give rise to a primary or lateral root." ! PROPOSED: pattern specification process that OBO_REL:results_in_specification_of root meristem [cdef(GO:0007389, [OBO_REL:results_in_specification_of=PO:0006085])] [Term] id: GO:0010071 ! root meristem specification intersection_of: GO:0007389 ! pattern specification process intersection_of: OBO_REL:results_in_specification_of PO:0006085 ! root meristem ! seconds spent parsing GO:0010071: 10.5 ! parse: GO:0010072 using "primary shoot apical meristem specification" => cdef(GO:0007389, [OBO_REL:results_in_specification_of=PO:0020144, OBO_REL:unfolds_in=PO:0006341]) [-3] ! parse: GO:0010072 using "primary shoot apical meristem specification" => cdef(GO:0007389, [OBO_REL:results_in_specification_of=cdef(PO:0020144, [OBO_REL:part_of=PO:0006341])]) [-3] ! no existing xp def ! def: "The specification of the meristem which will give rise to all post-embryonic above-ground structures of the plant as well as the non-root below-ground structures, such as rhizomes and tubers." ! PROPOSED: pattern specification process that OBO_REL:results_in_specification_of cdef(PO:0020144, [OBO_REL:part_of=PO:0006341]) [cdef(GO:0007389, [OBO_REL:results_in_specification_of=cdef(PO:0020144, [OBO_REL:part_of=PO:0006341])])] [Term] id: GO:0010072 ! primary shoot apical meristem specification intersection_of: GO:0007389 ! pattern specification process intersection_of: OBO_REL:results_in_specification_of primary_shoot_apical_meristem ! seconds spent parsing GO:0010072: 10.76 ! No parse for: GO:0010073 meristem maintenance ! No parse for: GO:0010074 maintenance of meristem identity ! parse: GO:0010086 using "embryonic root morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=PO:0000045]) [-2] ! parse: GO:0010086 using "embryonic root morphogenesis" => cdef(GO:0010015, [OBO_REL:part_of=GO:0009790]) [-2] ! parse: GO:0010086 using "embryonic root morphogenesis" => cdef(cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=PO:0009005]), [OBO_REL:part_of=GO:0009790]) [-3] ! no existing xp def ! def: "The process by which the anatomical structures of the embryonic root are generated and organized. Morphogenesis pertains to the creation of form." ! PROPOSED: root morphogenesis that OBO_REL:part_of embryonic development [cdef(GO:0010015, [OBO_REL:part_of=GO:0009790])] [Term] id: GO:0010086 ! embryonic root morphogenesis intersection_of: GO:0010015 ! root morphogenesis intersection_of: OBO_REL:part_of GO:0009790 ! embryonic development synonym: "embryogenesis, root morphogenesis" EXACT [OBOL:automatic] synonym: "embryonal development, root morphogenesis" EXACT [OBOL:automatic] synonym: "embryonic development, root morphogenesis" EXACT [OBOL:automatic] def: "A root morphogenesis that is part of a embryogenesis" [OBOL:automatic] ! seconds spent parsing GO:0010086: 5.26 ! No parse for: GO:0010087 vascular tissue development (sensu Tracheophyta) ! parse: GO:0010088 using "phloem histogenesis" => cdef(GO:0009888, [OBO_REL:results_in_developmental_progression_of=PO:0005417]) [-2] ! no existing xp def ! def: "The formation of the principal food-conducting tissue of a vascular plant." ! PROPOSED: tissue development that OBO_REL:results_in_developmental_progression_of phloem [cdef(GO:0009888, [OBO_REL:results_in_developmental_progression_of=PO:0005417])] [Term] id: GO:0010088 ! phloem histogenesis intersection_of: GO:0009888 ! tissue development intersection_of: OBO_REL:results_in_developmental_progression_of PO:0005417 ! phloem ! seconds spent parsing GO:0010088: 5.08 ! parse: GO:0010089 using "xylem histogenesis" => cdef(GO:0009888, [OBO_REL:results_in_developmental_progression_of=PO:0005352]) [-2] ! no existing xp def ! def: "The formation of the principal water-conducting tissue of a vascular plant." ! PROPOSED: tissue development that OBO_REL:results_in_developmental_progression_of xylem [cdef(GO:0009888, [OBO_REL:results_in_developmental_progression_of=PO:0005352])] [Term] id: GO:0010089 ! xylem histogenesis intersection_of: GO:0009888 ! tissue development intersection_of: OBO_REL:results_in_developmental_progression_of PO:0005352 ! xylem ! seconds spent parsing GO:0010089: 5.08 ! Already have xp for: GO:0010090 trichome morphogenesis ! CURRENT : anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of trichome [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=CL:0000282])] ! No parse for: GO:0010091 trichome branching ! No relation defined: results_in_complete_developmental_of ! parse: GO:0010098 using "suspensor development" => cdef(GO:0032502, [results_in_complete_developmental_of=PO:0020108]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the suspensor over time, from its formation to the mature structure. The suspensor is the extension at the base of the embryo that anchors the embryo in the embryo sac and pushes it into the endosperm." ! PROPOSED: developmental process that results_in_complete_developmental_of suspensor [cdef(GO:0032502, [results_in_complete_developmental_of=PO:0020108])] [Term] id: GO:0010098 ! suspensor development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of PO:0020108 ! suspensor ! seconds spent parsing GO:0010098: 4.65 ! parse: GO:0010102 using "lateral root morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=PO:0020121]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of lateral root are generated and organized. Morphogenesis pertains to the creation of form. A lateral root is one formed from pericycle cells located on the xylem radius of the root, as opposed to the initiation of the main root from the embryo proper." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of lateral root [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=PO:0020121])] [Term] id: GO:0010102 ! lateral root morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of PO:0020121 ! lateral root ! seconds spent parsing GO:0010102: 5.42 ! parse: GO:0010103 using "stomatal complex morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=PO:0002000]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of the stomatal complex are generated and organized. Morphogenesis pertains to the creation of form. The stomatal complex is the stomatal guard cells and their associated epidermal cells." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of stomatal complex [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=PO:0002000])] [Term] id: GO:0010103 ! stomatal complex morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of PO:0002000 ! stomatal complex ! seconds spent parsing GO:0010103: 5.09 ! No parse for: GO:0010106 cellular response to iron ion starvation ! parse: GO:0010111 using "glyoxysome organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0009514]) [-2] ! no existing xp def ! def: "A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the glyoxysome." ! PROPOSED: cellular component organization and biogenesis that OBO_REL:results_in_structural_change_to glyoxysome [cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0009514])] [Term] id: GO:0010111 ! glyoxysome organization and biogenesis intersection_of: GO:0016043 ! cellular component organization and biogenesis intersection_of: OBO_REL:results_in_structural_change_to GO:0009514 ! glyoxysome synonym: "glyoxysome organization" EXACT [OBOL:automatic] ! seconds spent parsing GO:0010111: 11.06 ! No parse for: GO:0010118 stomatal movement ! No parse for: GO:0010134 sulfate assimilation via adenylyl sulfate reduction ! parse: GO:0010150 using "leaf senescence" => cdef(GO:0010149, [OBO_REL:results_in_developmental_progression_of=PO:0009025]) [-2] ! no existing xp def ! def: "The process that occurs in a leaf near the end of its active life that is associated with the dismantling of cell components and membranes, loss of functional chloroplasts, and an overall decline in metabolism." ! PROPOSED: senescence that OBO_REL:results_in_developmental_progression_of leaf [cdef(GO:0010149, [OBO_REL:results_in_developmental_progression_of=PO:0009025])] [Term] id: GO:0010150 ! leaf senescence intersection_of: GO:0010149 ! senescence intersection_of: OBO_REL:results_in_developmental_progression_of PO:0009025 ! leaf ! seconds spent parsing GO:0010150: 9.08 ! No relation defined: results_in_increased_length_of ! parse: GO:0010151 using "chloroplast elongation" => cdef(GO:0008150, [results_in_increased_length_of=GO:0009507]) [-2] ! no existing xp def ! def: "Expansion of the chloroplast that usually precedes division." ! PROPOSED: biological_process that results_in_increased_length_of chloroplast [cdef(GO:0008150, [results_in_increased_length_of=GO:0009507])] [Term] id: GO:0010151 ! chloroplast elongation intersection_of: GO:0008150 ! biological_process intersection_of: results_in_increased_length_of GO:0009507 ! chloroplast synonym: "elongation of chloroplast" EXACT [OBOL:automatic] ! seconds spent parsing GO:0010151: 5.53 ! Already have xp for: GO:0010152 pollen maturation ! CURRENT : developmental maturation that OBO_REL:results_in_developmental_progression_of pollen [cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=cell:pollen])] ! No relation defined: results_in_complete_developmental_of ! parse: GO:0010154 using "fruit development" => cdef(GO:0032502, [results_in_complete_developmental_of=PO:0009001]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the fruit over time, from its formation to the mature structure. The fruit is a reproductive body of a seed plant." ! PROPOSED: developmental process that results_in_complete_developmental_of fruit [cdef(GO:0032502, [results_in_complete_developmental_of=PO:0009001])] [Term] id: GO:0010154 ! fruit development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of PO:0009001 ! fruit ! seconds spent parsing GO:0010154: 4.63 ! No parse for: GO:0010160 formation of organ boundary ! No parse for: GO:0010162 seed dormancy ! parse: GO:0010171 using "body morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000004]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of the soma are generated and organized. Morphogenesis pertains to the creation of form." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of trunk [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000004])] [Term] id: GO:0010171 ! body morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of MA:0000004 ! trunk synonym: "trunk anatomical structure morphogenesis" EXACT [OBOL:automatic] synonym: "trunk morphogenesis" EXACT [OBOL:automatic] ! seconds spent parsing GO:0010171: 5.1 ! parse: GO:0010172 using "embryonic body morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(embryonic body, anatomy)]) [-15] ! parse: GO:0010172 using "embryonic body morphogenesis" => cdef(GO:0010171, [OBO_REL:part_of=GO:0009790]) [-2] ! parse: GO:0010172 using "embryonic body morphogenesis" => cdef(GO:0010171, [OBO_REL:results_in_developmental_progression_of=anon(embryonic, anatomy)]) [-10] ! parse: GO:0010172 using "embryonic body morphogenesis" => cdef(cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000004]), [OBO_REL:part_of=GO:0009790]) [-3] ! no existing xp def ! def: "The process by which the anatomical structures of the embryonic soma are generated and organized. Morphogenesis pertains to the creation of form." ! PROPOSED: body morphogenesis that OBO_REL:part_of embryonic development [cdef(GO:0010171, [OBO_REL:part_of=GO:0009790])] [Term] id: GO:0010172 ! embryonic body morphogenesis intersection_of: GO:0010171 ! body morphogenesis intersection_of: OBO_REL:part_of GO:0009790 ! embryonic development synonym: "embryogenesis, body morphogenesis" EXACT [OBOL:automatic] synonym: "embryonal development, body morphogenesis" EXACT [OBOL:automatic] synonym: "embryonic development, body morphogenesis" EXACT [OBOL:automatic] def: "A body morphogenesis that is part of a embryogenesis" [OBOL:automatic] ! seconds spent parsing GO:0010172: 4.49 ! No parse for: GO:0010183 pollen tube guidance ! parse: GO:0010190 using "cytochrome b6f complex assembly" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0009512]) [-2] ! parse: GO:0010190 using "cytochrome b6f complex biogenesis" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0009512]) [-2] ! no existing xp def ! def: "Formation of cytochrome b6f complex, a complex that transfers electrons from reduced plastoquinone to oxidized plastocyanin and translocates protons from the stroma to the lumen, by the aggregation and bonding together of its constituents." ! PROPOSED: cellular component assembly that OBO_REL:results_in_creation_of cytochrome b6f complex [cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0009512])] [Term] id: GO:0010190 ! cytochrome b6f complex assembly intersection_of: GO:0022607 ! cellular component assembly intersection_of: OBO_REL:results_in_creation_of GO:0009512 ! cytochrome b6f complex synonym: "assembly and maintenance of cyt b (6) f complex" EXACT [OBOL:automatic] synonym: "assembly and maintenance of cyt b 6 f complex" EXACT [OBOL:automatic] synonym: "assembly and maintenance of cyt b 6-f complex" EXACT [OBOL:automatic] synonym: "assembly and maintenance of cyt b 6/f complex" EXACT [OBOL:automatic] synonym: "assembly and maintenance of cytochrome b (6) f complex" EXACT [OBOL:automatic] synonym: "assembly and maintenance of cytochrome b 6 f complex" EXACT [OBOL:automatic] synonym: "assembly and maintenance of cytochrome b 6-f complex" EXACT [OBOL:automatic] synonym: "assembly and maintenance of cytochrome b 6/f complex" EXACT [OBOL:automatic] synonym: "assembly of cyt b (6) f complex" EXACT [OBOL:automatic] synonym: "assembly of cyt b 6 f complex" EXACT [OBOL:automatic] synonym: "assembly of cyt b 6-f complex" EXACT [OBOL:automatic] synonym: "assembly of cyt b 6/f complex" EXACT [OBOL:automatic] synonym: "assembly of cytochrome b (6) f complex" EXACT [OBOL:automatic] synonym: "assembly of cytochrome b 6 f complex" EXACT [OBOL:automatic] synonym: "assembly of cytochrome b 6-f complex" EXACT [OBOL:automatic] synonym: "assembly of cytochrome b 6/f complex" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of cyt b (6) f complex" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of cyt b 6 f complex" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of cyt b 6-f complex" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of cyt b 6/f complex" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of cytochrome b (6) f complex" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of cytochrome b 6 f complex" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of cytochrome b 6-f complex" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of cytochrome b 6/f complex" EXACT [OBOL:automatic] synonym: "biogenesis of cyt b (6) f complex" EXACT [OBOL:automatic] synonym: "biogenesis of cyt b 6 f complex" EXACT [OBOL:automatic] synonym: "biogenesis of cyt b 6-f complex" EXACT [OBOL:automatic] synonym: "biogenesis of cyt b 6/f complex" EXACT [OBOL:automatic] synonym: "biogenesis of cytochrome b (6) f complex" EXACT [OBOL:automatic] synonym: "biogenesis of cytochrome b 6 f complex" EXACT [OBOL:automatic] synonym: "biogenesis of cytochrome b 6-f complex" EXACT [OBOL:automatic] synonym: "biogenesis of cytochrome b 6/f complex" EXACT [OBOL:automatic] synonym: "cell structure assembly of cyt b (6) f complex" EXACT [OBOL:automatic] synonym: "cell structure assembly of cyt b 6 f complex" EXACT [OBOL:automatic] synonym: "cell structure assembly of cyt b 6-f complex" EXACT [OBOL:automatic] synonym: "cell structure assembly of cyt b 6/f complex" EXACT [OBOL:automatic] synonym: "cell structure assembly of cytochrome b (6) f complex" EXACT [OBOL:automatic] synonym: "cell structure assembly of cytochrome b 6 f complex" EXACT [OBOL:automatic] synonym: "cell structure assembly of cytochrome b 6-f complex" EXACT [OBOL:automatic] synonym: "cell structure assembly of cytochrome b 6/f complex" EXACT [OBOL:automatic] synonym: "cellular component assembly of cyt b (6) f complex" EXACT [OBOL:automatic] synonym: "cellular component assembly of cyt b 6 f complex" EXACT [OBOL:automatic] synonym: "cellular component assembly of cyt b 6-f complex" EXACT [OBOL:automatic] synonym: "cellular component assembly of cyt b 6/f complex" EXACT [OBOL:automatic] synonym: "cellular component assembly of cytochrome b (6) f complex" EXACT [OBOL:automatic] synonym: "cellular component assembly of cytochrome b 6 f complex" EXACT [OBOL:automatic] synonym: "cellular component assembly of cytochrome b 6-f complex" EXACT [OBOL:automatic] synonym: "cellular component assembly of cytochrome b 6/f complex" EXACT [OBOL:automatic] synonym: "complex assembly of cyt b (6) f complex" EXACT [OBOL:automatic] synonym: "complex assembly of cyt b 6 f complex" EXACT [OBOL:automatic] synonym: "complex assembly of cyt b 6-f complex" EXACT [OBOL:automatic] synonym: "complex assembly of cyt b 6/f complex" EXACT [OBOL:automatic] synonym: "complex assembly of cytochrome b (6) f complex" EXACT [OBOL:automatic] synonym: "complex assembly of cytochrome b 6 f complex" EXACT [OBOL:automatic] synonym: "complex assembly of cytochrome b 6-f complex" EXACT [OBOL:automatic] synonym: "complex assembly of cytochrome b 6/f complex" EXACT [OBOL:automatic] synonym: "cyt b (6) f complex assembly" EXACT [OBOL:automatic] synonym: "cyt b (6) f complex assembly and maintenance" EXACT [OBOL:automatic] synonym: "cyt b (6) f complex biogenesis" EXACT [OBOL:automatic] synonym: "cyt b (6) f complex biogenesis and assembly" EXACT [OBOL:automatic] synonym: "cyt b (6) f complex cell structure assembly" EXACT [OBOL:automatic] synonym: "cyt b (6) f complex cellular component assembly" EXACT [OBOL:automatic] synonym: "cyt b (6) f complex complex assembly" EXACT [OBOL:automatic] synonym: "cyt b (6) f complex formation" EXACT [OBOL:automatic] synonym: "cyt b 6 f complex assembly" EXACT [OBOL:automatic] synonym: "cyt b 6 f complex assembly and maintenance" EXACT [OBOL:automatic] synonym: "cyt b 6 f complex biogenesis" EXACT [OBOL:automatic] synonym: "cyt b 6 f complex biogenesis and assembly" EXACT [OBOL:automatic] synonym: "cyt b 6 f complex cell structure assembly" EXACT [OBOL:automatic] synonym: "cyt b 6 f complex cellular component assembly" EXACT [OBOL:automatic] synonym: "cyt b 6 f complex complex assembly" EXACT [OBOL:automatic] synonym: "cyt b 6 f complex formation" EXACT [OBOL:automatic] synonym: "cyt b 6-f complex assembly" EXACT [OBOL:automatic] synonym: "cyt b 6-f complex assembly and maintenance" EXACT [OBOL:automatic] synonym: "cyt b 6-f complex biogenesis" EXACT [OBOL:automatic] synonym: "cyt b 6-f complex biogenesis and assembly" EXACT [OBOL:automatic] synonym: "cyt b 6-f complex cell structure assembly" EXACT [OBOL:automatic] synonym: "cyt b 6-f complex cellular component assembly" EXACT [OBOL:automatic] synonym: "cyt b 6-f complex complex assembly" EXACT [OBOL:automatic] synonym: "cyt b 6-f complex formation" EXACT [OBOL:automatic] synonym: "cyt b 6/f complex assembly" EXACT [OBOL:automatic] synonym: "cyt b 6/f complex assembly and maintenance" EXACT [OBOL:automatic] synonym: "cyt b 6/f complex biogenesis" EXACT [OBOL:automatic] synonym: "cyt b 6/f complex biogenesis and assembly" EXACT [OBOL:automatic] synonym: "cyt b 6/f complex cell structure assembly" EXACT [OBOL:automatic] synonym: "cyt b 6/f complex cellular component assembly" EXACT [OBOL:automatic] synonym: "cyt b 6/f complex complex assembly" EXACT [OBOL:automatic] synonym: "cyt b 6/f complex formation" EXACT [OBOL:automatic] synonym: "cytochrome b (6) f complex assembly" EXACT [OBOL:automatic] synonym: "cytochrome b (6) f complex assembly and maintenance" EXACT [OBOL:automatic] synonym: "cytochrome b (6) f complex biogenesis" EXACT [OBOL:automatic] synonym: "cytochrome b (6) f complex biogenesis and assembly" EXACT [OBOL:automatic] synonym: "cytochrome b (6) f complex cell structure assembly" EXACT [OBOL:automatic] synonym: "cytochrome b (6) f complex cellular component assembly" EXACT [OBOL:automatic] synonym: "cytochrome b (6) f complex complex assembly" EXACT [OBOL:automatic] synonym: "cytochrome b (6) f complex formation" EXACT [OBOL:automatic] synonym: "cytochrome b 6 f complex assembly" EXACT [OBOL:automatic] synonym: "cytochrome b 6 f complex assembly and maintenance" EXACT [OBOL:automatic] synonym: "cytochrome b 6 f complex biogenesis" EXACT [OBOL:automatic] synonym: "cytochrome b 6 f complex biogenesis and assembly" EXACT [OBOL:automatic] synonym: "cytochrome b 6 f complex cell structure assembly" EXACT [OBOL:automatic] synonym: "cytochrome b 6 f complex cellular component assembly" EXACT [OBOL:automatic] synonym: "cytochrome b 6 f complex complex assembly" EXACT [OBOL:automatic] synonym: "cytochrome b 6 f complex formation" EXACT [OBOL:automatic] synonym: "cytochrome b 6-f complex assembly" EXACT [OBOL:automatic] synonym: "cytochrome b 6-f complex assembly and maintenance" EXACT [OBOL:automatic] synonym: "cytochrome b 6-f complex biogenesis" EXACT [OBOL:automatic] synonym: "cytochrome b 6-f complex biogenesis and assembly" EXACT [OBOL:automatic] synonym: "cytochrome b 6-f complex cell structure assembly" EXACT [OBOL:automatic] synonym: "cytochrome b 6-f complex cellular component assembly" EXACT [OBOL:automatic] synonym: "cytochrome b 6-f complex complex assembly" EXACT [OBOL:automatic] synonym: "cytochrome b 6-f complex formation" EXACT [OBOL:automatic] synonym: "cytochrome b 6/f complex assembly" EXACT [OBOL:automatic] synonym: "cytochrome b 6/f complex assembly and maintenance" EXACT [OBOL:automatic] synonym: "cytochrome b 6/f complex biogenesis" EXACT [OBOL:automatic] synonym: "cytochrome b 6/f complex biogenesis and assembly" EXACT [OBOL:automatic] synonym: "cytochrome b 6/f complex cell structure assembly" EXACT [OBOL:automatic] synonym: "cytochrome b 6/f complex cellular component assembly" EXACT [OBOL:automatic] synonym: "cytochrome b 6/f complex complex assembly" EXACT [OBOL:automatic] synonym: "cytochrome b 6/f complex formation" EXACT [OBOL:automatic] synonym: "formation of cyt b (6) f complex" EXACT [OBOL:automatic] synonym: "formation of cyt b 6 f complex" EXACT [OBOL:automatic] synonym: "formation of cyt b 6-f complex" EXACT [OBOL:automatic] synonym: "formation of cyt b 6/f complex" EXACT [OBOL:automatic] synonym: "formation of cytochrome b (6) f complex" EXACT [OBOL:automatic] synonym: "formation of cytochrome b 6 f complex" EXACT [OBOL:automatic] synonym: "formation of cytochrome b 6-f complex" EXACT [OBOL:automatic] synonym: "formation of cytochrome b 6/f complex" EXACT [OBOL:automatic] def: "The aggregation and bonding together of a set of macromolecules to form a cyt b (6) f complex" [OBOL:automatic] ! seconds spent parsing GO:0010190: 15.59 ! No parse for: GO:0010197 polar nucleus fusion ! Already have xp for: GO:0010198 synergid death ! CURRENT : death that OBO_REL:results_in_developmental_progression_of synergid [cdef(GO:0016265, [OBO_REL:results_in_developmental_progression_of=CL:0000288])] ! No parse for: GO:0010199 organ boundary specification between lateral organs and the meristem ! No parse for: GO:0010205 photoinhibition ! No parse for: GO:0010206 photosystem II repair ! parse: GO:0010207 using "photosystem II assembly" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0009523]) [-2] ! no existing xp def ! def: "The aggregation and bonding together of a set of components to form a photosystem II complex on thylakoid membrane. In plants, the photosystem II complex consists of over 20 polypeptides encoded by either nuclear or chloroplast genome." ! PROPOSED: cellular component assembly that OBO_REL:results_in_creation_of photosystem II [cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0009523])] [Term] id: GO:0010207 ! photosystem II assembly intersection_of: GO:0022607 ! cellular component assembly intersection_of: OBO_REL:results_in_creation_of GO:0009523 ! photosystem II synonym: "assembly and maintenance of photosystem II" EXACT [OBOL:automatic] synonym: "assembly of photosystem II" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of photosystem II" EXACT [OBOL:automatic] synonym: "biogenesis of photosystem II" EXACT [OBOL:automatic] synonym: "cell structure assembly of photosystem II" EXACT [OBOL:automatic] synonym: "cellular component assembly of photosystem II" EXACT [OBOL:automatic] synonym: "complex assembly of photosystem II" EXACT [OBOL:automatic] synonym: "formation of photosystem II" EXACT [OBOL:automatic] synonym: "photosystem II assembly and maintenance" EXACT [OBOL:automatic] synonym: "photosystem II biogenesis" EXACT [OBOL:automatic] synonym: "photosystem II biogenesis and assembly" EXACT [OBOL:automatic] synonym: "photosystem II cell structure assembly" EXACT [OBOL:automatic] synonym: "photosystem II cellular component assembly" EXACT [OBOL:automatic] synonym: "photosystem II complex assembly" EXACT [OBOL:automatic] synonym: "photosystem II formation" EXACT [OBOL:automatic] def: "The aggregation and bonding together of a set of macromolecules to form a photosystem II" [OBOL:automatic] ! seconds spent parsing GO:0010207: 10.82 ! Already have xp for: GO:0010208 pollen wall formation ! CURRENT : cellular component assembly that OBO_REL:results_in_creation_of pollen wall [cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0043667])] ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0010214 using "seed coat development" => cdef(GO:0032502, [results_in_complete_developmental_of=PO:0009088]) [-2] ! parse: GO:0010214 using "seed coat development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(coat, anatomy), OBO_REL:unfolds_in=PO:0009010]) [-6] ! no existing xp def ! def: "The process whose specific outcome is the progression of the seed coat over time, from its formation to the mature structure." ! PROPOSED: developmental process that results_in_complete_developmental_of seed coat [cdef(GO:0032502, [results_in_complete_developmental_of=PO:0009088])] [Term] id: GO:0010214 ! seed coat development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of PO:0009088 ! seed coat ! seconds spent parsing GO:0010214: 9.09 ! parse: GO:0010215 using "cellulose microfibril organization" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0009549]) [-2] ! no existing xp def ! def: "Oriented deposition of cellulose microfibrils during plant cell wall biosynthesis." ! PROPOSED: cellular component organization and biogenesis that OBO_REL:results_in_structural_change_to cellulose microfibril [cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0009549])] [Term] id: GO:0010215 ! cellulose microfibril organization intersection_of: GO:0016043 ! cellular component organization and biogenesis intersection_of: OBO_REL:results_in_structural_change_to GO:0009549 ! cellulose microfibril synonym: "cellulose microfibril organization and biogenesis" EXACT [OBOL:automatic] ! seconds spent parsing GO:0010215: 11.07 ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0010222 using "stem vascular tissue pattern formation" => cdef(GO:0007389, [OBO_REL:results_in_developmental_progression_of=PO:0009015, OBO_REL:unfolds_in=PO:0009047]) [-3] ! parse: GO:0010222 using "stem vascular tissue pattern formation" => cdef(GO:0007389, [OBO_REL:results_in_developmental_progression_of=cdef(PO:0009015, [OBO_REL:part_of=PO:0009047])]) [-3] ! parse: GO:0010222 using "stem vascular tissue pattern formation" => cdef(GO:0007389, [OBO_REL:results_in_patterning_for=PO:0009015, OBO_REL:unfolds_in=PO:0009047]) [-3] ! parse: GO:0010222 using "stem vascular tissue pattern formation" => cdef(GO:0007389, [OBO_REL:results_in_patterning_for=cdef(PO:0009015, [OBO_REL:part_of=PO:0009047])]) [-3] ! parse: GO:0010222 using "stem vascular tissue pattern formation" => cdef(GO:0007389, [OBO_REL:unfolds_in=PO:0009015, OBO_REL:unfolds_in=PO:0009047]) [-3] ! parse: GO:0010222 using "stem vascular tissue pattern formation" => cdef(GO:0007389, [OBO_REL:unfolds_in=cdef(PO:0009015, [OBO_REL:part_of=PO:0009047])]) [-3] ! parse: GO:0010222 using "stem vascular tissue pattern formation" => cdef(GO:0048646, [and=OBO_REL:results_in_formation_of(anon(pattern, anatomy))/unfolds_in(PO:0009015), OBO_REL:unfolds_in=PO:0009047]) [-3] ! parse: GO:0010222 using "stem vascular tissue pattern formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(pattern, anatomy), OBO_REL:unfolds_in=cdef(PO:0009015, [OBO_REL:part_of=PO:0009047])]) [-10] ! no existing xp def ! def: "Vascular tissue pattern formation as it occurs in the stem of vascular plants." ! PROPOSED: anatomical structure formation that and OBO_REL:results_in_formation_of(anon(pattern, anatomy))/unfolds_in(PO:0009015) and OBO_REL:unfolds_in stem [cdef(GO:0048646, [and=OBO_REL:results_in_formation_of(anon(pattern, anatomy))/unfolds_in(PO:0009015), OBO_REL:unfolds_in=PO:0009047])] [Term] id: GO:0010222 ! stem vascular tissue pattern formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: and OBO_REL:results_in_formation_of(anon(pattern, anatomy))/unfolds_in(PO:0009015) intersection_of: OBO_REL:unfolds_in PO:0009047 ! stem ! seconds spent parsing GO:0010222: 11.06 ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0010223 using "auxiliary shoot formation" => cdef(GO:0010346, [OBO_REL:results_in_developmental_progression_of=anon(auxiliary, anatomy)]) [-10] ! parse: GO:0010223 using "auxiliary shoot formation" => cdef(GO:0010346, [OBO_REL:results_in_formation_of=anon(auxiliary, anatomy)]) [-10] ! parse: GO:0010223 using "auxiliary shoot formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(auxiliary shoot, anatomy)]) [-16] ! parse: GO:0010223 using "axillary shoot formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=PO:0006343]) [-2] ! parse: GO:0010223 using "axillary shoot formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=PO:0006343]) [-2] ! parse: GO:0010223 using "secondary shoot formation" => cdef(GO:0010346, [OBO_REL:results_in_developmental_progression_of=anon(secondary, anatomy)]) [-10] ! parse: GO:0010223 using "secondary shoot formation" => cdef(GO:0010346, [OBO_REL:results_in_formation_of=anon(secondary, anatomy)]) [-10] ! parse: GO:0010223 using "secondary shoot formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(secondary shoot, anatomy)]) [-16] ! no existing xp def ! def: "The process that gives rise to secondary (or auxiliary or axillary) shoots in plants. This process pertains to the initial formation of a structure from unspecified parts. These secondary shoots originate from secondary meristems initiated in the axils of leaf primordia. Axillary meristems function like the shoot apical meristem of the primary shoot initating the development of lateral organs." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of axillary shoot [cdef(GO:0048646, [OBO_REL:results_in_formation_of=PO:0006343])] [Term] id: GO:0010223 ! secondary shoot formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of PO:0006343 ! axillary shoot ! seconds spent parsing GO:0010223: 14.07 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0010229 using "inflorescence development" => cdef(GO:0032502, [results_in_complete_developmental_of=PO:0009049]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of an inflorescence over time, from its formation to the mature structure." ! PROPOSED: developmental process that results_in_complete_developmental_of inflorescence [cdef(GO:0032502, [results_in_complete_developmental_of=PO:0009049])] [Term] id: GO:0010229 ! inflorescence development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of PO:0009049 ! inflorescence ! seconds spent parsing GO:0010229: 4.65 ! parse: GO:0010233 using "phloem transport" => cdef(GO:0006810, [OBO_REL:results_in_transport_of=PO:0005417]) [-2] ! no existing xp def ! def: "The directed movement of substances, into, out of or within a cell, either in a phloem tissue or in the phloem membrane." ! PROPOSED: transport that OBO_REL:results_in_transport_of phloem [cdef(GO:0006810, [OBO_REL:results_in_transport_of=PO:0005417])] [Term] id: GO:0010233 ! phloem transport intersection_of: GO:0006810 ! transport intersection_of: OBO_REL:results_in_transport_of PO:0005417 ! phloem ! seconds spent parsing GO:0010233: 5.07 ! Already have xp for: GO:0010235 guard mother cell cytokinesis ! CURRENT : cytokinesis that OBO_REL:results_in_division_of guard mother cell [cdef(GO:0000910, [OBO_REL:results_in_division_of=CL:0000262])] ! No parse for: GO:0010239 chloroplast mRNA processing ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0010245 using "radial microtubular system formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(microtubular system, anatomy), OBO_REL:unfolds_in=ZFA:0000271]) [-21] ! parse: GO:0010245 using "radial microtubular system formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(microtubular system, anatomy), OBO_REL:unfolds_in=cell:radial]) [-21] ! no existing xp def ! def: "Formation of radial microtubular systems during male meiotic cytokinesis in plants." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of anon(microtubular system, anatomy) and OBO_REL:unfolds_in radial [cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(microtubular system, anatomy), OBO_REL:unfolds_in=cell:radial])] [Term] id: GO:0010245 ! radial microtubular system formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of anatomy:microtubular_system intersection_of: OBO_REL:unfolds_in cell:radial ! radial synonym: "radial microtubular system anatomical structure formation" EXACT [OBOL:automatic] synonym: "radial microtubular system formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0010245: 9.39 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0010254 using "nectary development" => cdef(GO:0032502, [results_in_complete_developmental_of=PO:0009035]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the floral nectaries over time, from its formation to the mature structure." ! PROPOSED: developmental process that results_in_complete_developmental_of nectary [cdef(GO:0032502, [results_in_complete_developmental_of=PO:0009035])] [Term] id: GO:0010254 ! nectary development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of PO:0009035 ! nectary ! seconds spent parsing GO:0010254: 4.65 ! parse: GO:0010258 using "NADH dehydrogenase complex (plastoquinone) assembly" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0031675]) [-2] ! no existing xp def ! def: "The aggregation and bonding together of a set of components to form NADH:plastoquinone dehydrogenase complex, which is involved in the non-photochemical reduction of plastoquinones, as well as the cyclic electron transport around photosystem I." ! PROPOSED: cellular component assembly that OBO_REL:results_in_creation_of NADH dehydrogenase complex (plastoquinone) [cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0031675])] [Term] id: GO:0010258 ! NADH dehydrogenase complex (plastoquinone) assembly intersection_of: GO:0022607 ! cellular component assembly intersection_of: OBO_REL:results_in_creation_of GO:0031675 ! NADH dehydrogenase complex (plastoquinone) synonym: "NADH : plastoquinone reductase complex assembly" EXACT [OBOL:automatic] synonym: "NADH : plastoquinone reductase complex assembly and maintenance" EXACT [OBOL:automatic] synonym: "NADH : plastoquinone reductase complex biogenesis" EXACT [OBOL:automatic] synonym: "NADH : plastoquinone reductase complex biogenesis and assembly" EXACT [OBOL:automatic] synonym: "NADH : plastoquinone reductase complex cell structure assembly" EXACT [OBOL:automatic] synonym: "NADH : plastoquinone reductase complex cellular component assembly" EXACT [OBOL:automatic] synonym: "NADH : plastoquinone reductase complex complex assembly" EXACT [OBOL:automatic] synonym: "NADH : plastoquinone reductase complex formation" EXACT [OBOL:automatic] synonym: "NADH dehydrogenase complex (plastoquinone) assembly" EXACT [OBOL:automatic] synonym: "NADH dehydrogenase complex (plastoquinone) assembly and maintenance" EXACT [OBOL:automatic] synonym: "NADH dehydrogenase complex (plastoquinone) biogenesis" EXACT [OBOL:automatic] synonym: "NADH dehydrogenase complex (plastoquinone) biogenesis and assembly" EXACT [OBOL:automatic] synonym: "NADH dehydrogenase complex (plastoquinone) cell structure assembly" EXACT [OBOL:automatic] synonym: "NADH dehydrogenase complex (plastoquinone) cellular component assembly" EXACT [OBOL:automatic] synonym: "NADH dehydrogenase complex (plastoquinone) complex assembly" EXACT [OBOL:automatic] synonym: "NADH dehydrogenase complex (plastoquinone) formation" EXACT [OBOL:automatic] synonym: "assembly and maintenance of NADH : plastoquinone reductase complex" EXACT [OBOL:automatic] synonym: "assembly and maintenance of NADH dehydrogenase complex (plastoquinone)" EXACT [OBOL:automatic] synonym: "assembly of NADH : plastoquinone reductase complex" EXACT [OBOL:automatic] synonym: "assembly of NADH dehydrogenase complex (plastoquinone)" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of NADH : plastoquinone reductase complex" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of NADH dehydrogenase complex (plastoquinone)" EXACT [OBOL:automatic] synonym: "biogenesis of NADH : plastoquinone reductase complex" EXACT [OBOL:automatic] synonym: "biogenesis of NADH dehydrogenase complex (plastoquinone)" EXACT [OBOL:automatic] synonym: "cell structure assembly of NADH : plastoquinone reductase complex" EXACT [OBOL:automatic] synonym: "cell structure assembly of NADH dehydrogenase complex (plastoquinone)" EXACT [OBOL:automatic] synonym: "cellular component assembly of NADH : plastoquinone reductase complex" EXACT [OBOL:automatic] synonym: "cellular component assembly of NADH dehydrogenase complex (plastoquinone)" EXACT [OBOL:automatic] synonym: "complex assembly of NADH : plastoquinone reductase complex" EXACT [OBOL:automatic] synonym: "complex assembly of NADH dehydrogenase complex (plastoquinone)" EXACT [OBOL:automatic] synonym: "formation of NADH : plastoquinone reductase complex" EXACT [OBOL:automatic] synonym: "formation of NADH dehydrogenase complex (plastoquinone)" EXACT [OBOL:automatic] def: "The aggregation and bonding together of a set of macromolecules to form a NADH : plastoquinone reductase complex" [OBOL:automatic] ! seconds spent parsing GO:0010258: 5.62 ! parse: GO:0010259 using "multicellular organismal aging" => cdef(GO:0007568, [OBO_REL:results_in_developmental_progression_of=anon(multicellular organismal, anatomy)]) [-25] ! no existing xp def ! def: "The inherent decline of a multicellular organism over time, from the optimal fertility and viability of early maturity, that may precede death and may be preceded by other indications, such as sterility." ! PROPOSED: aging that OBO_REL:results_in_developmental_progression_of anon(multicellular organismal, anatomy) [cdef(GO:0007568, [OBO_REL:results_in_developmental_progression_of=anon(multicellular organismal, anatomy)])] [Term] id: GO:0010259 ! multicellular organismal aging intersection_of: GO:0007568 ! aging intersection_of: OBO_REL:results_in_developmental_progression_of anatomy:multicellular_organismal synonym: "multicellular organismal ageing" EXACT [OBOL:automatic] ! seconds spent parsing GO:0010259: 4.17 ! parse: GO:0010260 using "organ senescence" => cdef(GO:0010149, [OBO_REL:results_in_developmental_progression_of=PO:0009008]) [-2] ! parse: GO:0010260 using "organ senescence" => cdef(GO:0010149, [OBO_REL:results_in_developmental_progression_of=ZFA:0000496]) [-2] ! no existing xp def ! def: "The process that occurs in an organ near the end of its active life that is associated with the dismantling of cell components and membranes, and an overall decline in metabolism." ! PROPOSED: senescence that OBO_REL:results_in_developmental_progression_of compound organ [cdef(GO:0010149, [OBO_REL:results_in_developmental_progression_of=ZFA:0000496])] [Term] id: GO:0010260 ! organ senescence intersection_of: GO:0010149 ! senescence intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0000496 ! compound organ synonym: "compound organ senescence" EXACT [OBOL:automatic] ! seconds spent parsing GO:0010260: 16.71 ! parse: GO:0010262 using "somatic embryogenesis" => cdef(GO:0009790, [OBO_REL:results_in_developmental_progression_of=anon(somatic, anatomy)]) [-8] ! no existing xp def ! def: "Initiation of a somatic embryo-an embryo arising from previously differentiated somatic cells, rather than from fused haploid gametes." ! PROPOSED: embryonic development that OBO_REL:results_in_developmental_progression_of anon(somatic, anatomy) [cdef(GO:0009790, [OBO_REL:results_in_developmental_progression_of=anon(somatic, anatomy)])] [Term] id: GO:0010262 ! somatic embryogenesis intersection_of: GO:0009790 ! embryonic development intersection_of: OBO_REL:results_in_developmental_progression_of anatomy:somatic synonym: "somatic embryonal development" EXACT [OBOL:automatic] synonym: "somatic embryonic development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0010262: 4.15 ! parse: GO:0010265 using "SCF complex assembly" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0019005]) [-2] ! no existing xp def ! def: "The aggregation and bonding together of a set of components to form the SKP1-Cullin/Cdc53-F-box protein ubiquitin ligase (SCF) complex." ! PROPOSED: cellular component assembly that OBO_REL:results_in_creation_of SCF ubiquitin ligase complex [cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0019005])] [Term] id: GO:0010265 ! SCF complex assembly intersection_of: GO:0022607 ! cellular component assembly intersection_of: OBO_REL:results_in_creation_of GO:0019005 ! SCF ubiquitin ligase complex synonym: "CDL 1 complex assembly" EXACT [OBOL:automatic] synonym: "CDL 1 complex assembly and maintenance" EXACT [OBOL:automatic] synonym: "CDL 1 complex biogenesis" EXACT [OBOL:automatic] synonym: "CDL 1 complex biogenesis and assembly" EXACT [OBOL:automatic] synonym: "CDL 1 complex cell structure assembly" EXACT [OBOL:automatic] synonym: "CDL 1 complex cellular component assembly" EXACT [OBOL:automatic] synonym: "CDL 1 complex complex assembly" EXACT [OBOL:automatic] synonym: "CDL 1 complex formation" EXACT [OBOL:automatic] synonym: "CRL 1 complex assembly" EXACT [OBOL:automatic] synonym: "CRL 1 complex assembly and maintenance" EXACT [OBOL:automatic] synonym: "CRL 1 complex biogenesis" EXACT [OBOL:automatic] synonym: "CRL 1 complex biogenesis and assembly" EXACT [OBOL:automatic] synonym: "CRL 1 complex cell structure assembly" EXACT [OBOL:automatic] synonym: "CRL 1 complex cellular component assembly" EXACT [OBOL:automatic] synonym: "CRL 1 complex complex assembly" EXACT [OBOL:automatic] synonym: "CRL 1 complex formation" EXACT [OBOL:automatic] synonym: "Cul 1-RING ubiquitin ligase complex assembly" EXACT [OBOL:automatic] synonym: "Cul 1-RING ubiquitin ligase complex assembly and maintenance" EXACT [OBOL:automatic] synonym: "Cul 1-RING ubiquitin ligase complex biogenesis" EXACT [OBOL:automatic] synonym: "Cul 1-RING ubiquitin ligase complex biogenesis and assembly" EXACT [OBOL:automatic] synonym: "Cul 1-RING ubiquitin ligase complex cell structure assembly" EXACT [OBOL:automatic] synonym: "Cul 1-RING ubiquitin ligase complex cellular component assembly" EXACT [OBOL:automatic] synonym: "Cul 1-RING ubiquitin ligase complex complex assembly" EXACT [OBOL:automatic] synonym: "Cul 1-RING ubiquitin ligase complex formation" EXACT [OBOL:automatic] synonym: "SCF complex assembly and maintenance" EXACT [OBOL:automatic] synonym: "SCF complex biogenesis" EXACT [OBOL:automatic] synonym: "SCF complex biogenesis and assembly" EXACT [OBOL:automatic] synonym: "SCF complex cell structure assembly" EXACT [OBOL:automatic] synonym: "SCF complex cellular component assembly" EXACT [OBOL:automatic] synonym: "SCF complex complex assembly" EXACT [OBOL:automatic] synonym: "SCF complex formation" EXACT [OBOL:automatic] synonym: "SCF ubiquitin ligase complex assembly" EXACT [OBOL:automatic] synonym: "SCF ubiquitin ligase complex assembly and maintenance" EXACT [OBOL:automatic] synonym: "SCF ubiquitin ligase complex biogenesis" EXACT [OBOL:automatic] synonym: "SCF ubiquitin ligase complex biogenesis and assembly" EXACT [OBOL:automatic] synonym: "SCF ubiquitin ligase complex cell structure assembly" EXACT [OBOL:automatic] synonym: "SCF ubiquitin ligase complex cellular component assembly" EXACT [OBOL:automatic] synonym: "SCF ubiquitin ligase complex complex assembly" EXACT [OBOL:automatic] synonym: "SCF ubiquitin ligase complex formation" EXACT [OBOL:automatic] synonym: "Skp 1/Cul 1/F-box protein complex assembly" EXACT [OBOL:automatic] synonym: "Skp 1/Cul 1/F-box protein complex assembly and maintenance" EXACT [OBOL:automatic] synonym: "Skp 1/Cul 1/F-box protein complex biogenesis" EXACT [OBOL:automatic] synonym: "Skp 1/Cul 1/F-box protein complex biogenesis and assembly" EXACT [OBOL:automatic] synonym: "Skp 1/Cul 1/F-box protein complex cell structure assembly" EXACT [OBOL:automatic] synonym: "Skp 1/Cul 1/F-box protein complex cellular component assembly" EXACT [OBOL:automatic] synonym: "Skp 1/Cul 1/F-box protein complex complex assembly" EXACT [OBOL:automatic] synonym: "Skp 1/Cul 1/F-box protein complex formation" EXACT [OBOL:automatic] synonym: "assembly and maintenance of CDL 1 complex" EXACT [OBOL:automatic] synonym: "assembly and maintenance of CRL 1 complex" EXACT [OBOL:automatic] synonym: "assembly and maintenance of Cul 1-RING ubiquitin ligase complex" EXACT [OBOL:automatic] synonym: "assembly and maintenance of SCF complex" EXACT [OBOL:automatic] synonym: "assembly and maintenance of SCF ubiquitin ligase complex" EXACT [OBOL:automatic] synonym: "assembly and maintenance of Skp 1/Cul 1/F-box protein complex" EXACT [OBOL:automatic] synonym: "assembly and maintenance of cullin-RING ligase 1" EXACT [OBOL:automatic] synonym: "assembly of CDL 1 complex" EXACT [OBOL:automatic] synonym: "assembly of CRL 1 complex" EXACT [OBOL:automatic] synonym: "assembly of Cul 1-RING ubiquitin ligase complex" EXACT [OBOL:automatic] synonym: "assembly of SCF complex" EXACT [OBOL:automatic] synonym: "assembly of SCF ubiquitin ligase complex" EXACT [OBOL:automatic] synonym: "assembly of Skp 1/Cul 1/F-box protein complex" EXACT [OBOL:automatic] synonym: "assembly of cullin-RING ligase 1" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of CDL 1 complex" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of CRL 1 complex" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of Cul 1-RING ubiquitin ligase complex" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of SCF complex" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of SCF ubiquitin ligase complex" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of Skp 1/Cul 1/F-box protein complex" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of cullin-RING ligase 1" EXACT [OBOL:automatic] synonym: "biogenesis of CDL 1 complex" EXACT [OBOL:automatic] synonym: "biogenesis of CRL 1 complex" EXACT [OBOL:automatic] synonym: "biogenesis of Cul 1-RING ubiquitin ligase complex" EXACT [OBOL:automatic] synonym: "biogenesis of SCF complex" EXACT [OBOL:automatic] synonym: "biogenesis of SCF ubiquitin ligase complex" EXACT [OBOL:automatic] synonym: "biogenesis of Skp 1/Cul 1/F-box protein complex" EXACT [OBOL:automatic] synonym: "biogenesis of cullin-RING ligase 1" EXACT [OBOL:automatic] synonym: "cell structure assembly of CDL 1 complex" EXACT [OBOL:automatic] synonym: "cell structure assembly of CRL 1 complex" EXACT [OBOL:automatic] synonym: "cell structure assembly of Cul 1-RING ubiquitin ligase complex" EXACT [OBOL:automatic] synonym: "cell structure assembly of SCF complex" EXACT [OBOL:automatic] synonym: "cell structure assembly of SCF ubiquitin ligase complex" EXACT [OBOL:automatic] synonym: "cell structure assembly of Skp 1/Cul 1/F-box protein complex" EXACT [OBOL:automatic] synonym: "cell structure assembly of cullin-RING ligase 1" EXACT [OBOL:automatic] synonym: "cellular component assembly of CDL 1 complex" EXACT [OBOL:automatic] synonym: "cellular component assembly of CRL 1 complex" EXACT [OBOL:automatic] synonym: "cellular component assembly of Cul 1-RING ubiquitin ligase complex" EXACT [OBOL:automatic] synonym: "cellular component assembly of SCF complex" EXACT [OBOL:automatic] synonym: "cellular component assembly of SCF ubiquitin ligase complex" EXACT [OBOL:automatic] synonym: "cellular component assembly of Skp 1/Cul 1/F-box protein complex" EXACT [OBOL:automatic] synonym: "cellular component assembly of cullin-RING ligase 1" EXACT [OBOL:automatic] synonym: "complex assembly of CDL 1 complex" EXACT [OBOL:automatic] synonym: "complex assembly of CRL 1 complex" EXACT [OBOL:automatic] synonym: "complex assembly of Cul 1-RING ubiquitin ligase complex" EXACT [OBOL:automatic] synonym: "complex assembly of SCF complex" EXACT [OBOL:automatic] synonym: "complex assembly of SCF ubiquitin ligase complex" EXACT [OBOL:automatic] synonym: "complex assembly of Skp 1/Cul 1/F-box protein complex" EXACT [OBOL:automatic] synonym: "complex assembly of cullin-RING ligase 1" EXACT [OBOL:automatic] synonym: "cullin-RING ligase 1 assembly" EXACT [OBOL:automatic] synonym: "cullin-RING ligase 1 assembly and maintenance" EXACT [OBOL:automatic] synonym: "cullin-RING ligase 1 biogenesis" EXACT [OBOL:automatic] synonym: "cullin-RING ligase 1 biogenesis and assembly" EXACT [OBOL:automatic] synonym: "cullin-RING ligase 1 cell structure assembly" EXACT [OBOL:automatic] synonym: "cullin-RING ligase 1 cellular component assembly" EXACT [OBOL:automatic] synonym: "cullin-RING ligase 1 complex assembly" EXACT [OBOL:automatic] synonym: "cullin-RING ligase 1 formation" EXACT [OBOL:automatic] synonym: "formation of CDL 1 complex" EXACT [OBOL:automatic] synonym: "formation of CRL 1 complex" EXACT [OBOL:automatic] synonym: "formation of Cul 1-RING ubiquitin ligase complex" EXACT [OBOL:automatic] synonym: "formation of SCF complex" EXACT [OBOL:automatic] synonym: "formation of SCF ubiquitin ligase complex" EXACT [OBOL:automatic] synonym: "formation of Skp 1/Cul 1/F-box protein complex" EXACT [OBOL:automatic] synonym: "formation of cullin-RING ligase 1" EXACT [OBOL:automatic] def: "The aggregation and bonding together of a set of macromolecules to form a CDL 1 complex" [OBOL:automatic] ! seconds spent parsing GO:0010265: 5.57 ! parse: GO:0010270 using "photosystem II oxygen evolving complex assembly" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0009654, OBO_REL:unfolds_in=GO:0009523]) [-3] ! parse: GO:0010270 using "photosystem II oxygen evolving complex assembly" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=cdef(GO:0009654, [OBO_REL:part_of=GO:0009523])]) [-3] ! no existing xp def ! def: "The aggregation and bonding together of a set of components to form the oxygen evolving complex (OEC) of photosystem II on thylakoid membrane. In plants, the photosystem II OEC consists of three extrinsic nuclear-encoded polypeptides: PsbO, PsbP and PsbQ; and protects the CaMn4 cluster bound to D1 and CP43 proteins." ! PROPOSED: cellular component assembly that OBO_REL:results_in_creation_of cdef(GO:0009654, [OBO_REL:part_of=GO:0009523]) [cdef(GO:0022607, [OBO_REL:results_in_creation_of=cdef(GO:0009654, [OBO_REL:part_of=GO:0009523])])] [Term] id: GO:0010270 ! photosystem II oxygen evolving complex assembly intersection_of: GO:0022607 ! cellular component assembly intersection_of: OBO_REL:results_in_creation_of photosystem_II_oxygen_evolving_complex synonym: "assembly and maintenance of photosystem II oxygen evolving complex" EXACT [OBOL:automatic] synonym: "assembly of photosystem II oxygen evolving complex" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of photosystem II oxygen evolving complex" EXACT [OBOL:automatic] synonym: "biogenesis of photosystem II oxygen evolving complex" EXACT [OBOL:automatic] synonym: "cell structure assembly of photosystem II oxygen evolving complex" EXACT [OBOL:automatic] synonym: "cellular component assembly of photosystem II oxygen evolving complex" EXACT [OBOL:automatic] synonym: "complex assembly of photosystem II oxygen evolving complex" EXACT [OBOL:automatic] synonym: "formation of photosystem II oxygen evolving complex" EXACT [OBOL:automatic] synonym: "photosystem II oxygen evolving complex assembly and maintenance" EXACT [OBOL:automatic] synonym: "photosystem II oxygen evolving complex biogenesis" EXACT [OBOL:automatic] synonym: "photosystem II oxygen evolving complex biogenesis and assembly" EXACT [OBOL:automatic] synonym: "photosystem II oxygen evolving complex cell structure assembly" EXACT [OBOL:automatic] synonym: "photosystem II oxygen evolving complex cellular component assembly" EXACT [OBOL:automatic] synonym: "photosystem II oxygen evolving complex complex assembly" EXACT [OBOL:automatic] synonym: "photosystem II oxygen evolving complex formation" EXACT [OBOL:automatic] def: "The aggregation and bonding together of a set of macromolecules to form a photosystem II oxygen evolving complex" [OBOL:automatic] ! seconds spent parsing GO:0010270: 22.36 ! No parse for: GO:0010275 NAD(P)H dehydrogenase complex assembly ! No parse for: GO:0010304 PSII associated light-harvesting complex II catabolic process ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0010305 using "leaf vascular tissue pattern formation" => cdef(GO:0007389, [OBO_REL:results_in_developmental_progression_of=PO:0009015, OBO_REL:unfolds_in=PO:0009025]) [-3] ! parse: GO:0010305 using "leaf vascular tissue pattern formation" => cdef(GO:0007389, [OBO_REL:results_in_developmental_progression_of=cdef(PO:0009015, [OBO_REL:part_of=PO:0009025])]) [-3] ! parse: GO:0010305 using "leaf vascular tissue pattern formation" => cdef(GO:0007389, [OBO_REL:results_in_patterning_for=PO:0009015, OBO_REL:unfolds_in=PO:0009025]) [-3] ! parse: GO:0010305 using "leaf vascular tissue pattern formation" => cdef(GO:0007389, [OBO_REL:results_in_patterning_for=cdef(PO:0009015, [OBO_REL:part_of=PO:0009025])]) [-3] ! parse: GO:0010305 using "leaf vascular tissue pattern formation" => cdef(GO:0007389, [OBO_REL:unfolds_in=PO:0009015, OBO_REL:unfolds_in=PO:0009025]) [-3] ! parse: GO:0010305 using "leaf vascular tissue pattern formation" => cdef(GO:0007389, [OBO_REL:unfolds_in=cdef(PO:0009015, [OBO_REL:part_of=PO:0009025])]) [-3] ! parse: GO:0010305 using "leaf vascular tissue pattern formation" => cdef(GO:0048646, [and=OBO_REL:results_in_formation_of(anon(pattern, anatomy))/unfolds_in(PO:0009015), OBO_REL:unfolds_in=PO:0009025]) [-3] ! parse: GO:0010305 using "leaf vascular tissue pattern formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(pattern, anatomy), OBO_REL:unfolds_in=cdef(PO:0009015, [OBO_REL:part_of=PO:0009025])]) [-10] ! no existing xp def ! def: "Vascular tissue pattern formation as it occurs in the leaf of vascular plants." ! PROPOSED: anatomical structure formation that and OBO_REL:results_in_formation_of(anon(pattern, anatomy))/unfolds_in(PO:0009015) and OBO_REL:unfolds_in leaf [cdef(GO:0048646, [and=OBO_REL:results_in_formation_of(anon(pattern, anatomy))/unfolds_in(PO:0009015), OBO_REL:unfolds_in=PO:0009025])] [Term] id: GO:0010305 ! leaf vascular tissue pattern formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: and OBO_REL:results_in_formation_of(anon(pattern, anatomy))/unfolds_in(PO:0009015) intersection_of: OBO_REL:unfolds_in PO:0009025 ! leaf ! seconds spent parsing GO:0010305: 6.14 ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0010311 using "lateral root formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=PO:0020121]) [-2] ! parse: GO:0010311 using "lateral root formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=PO:0020121]) [-2] ! no existing xp def ! def: "The process that gives rise to a lateral root. This process pertains to the initial formation of a structure from unspecified parts." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of lateral root [cdef(GO:0048646, [OBO_REL:results_in_formation_of=PO:0020121])] [Term] id: GO:0010311 ! lateral root formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of PO:0020121 ! lateral root ! seconds spent parsing GO:0010311: 5.43 ! No parse for: GO:0010324 membrane invagination ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0010338 using "leaf formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=PO:0009025]) [-2] ! parse: GO:0010338 using "leaf formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=PO:0009025]) [-2] ! no existing xp def ! def: "The process that gives rise to a leaf. This process pertains to the initial formation of a structure from unspecified parts." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of leaf [cdef(GO:0048646, [OBO_REL:results_in_formation_of=PO:0009025])] [Term] id: GO:0010338 ! leaf formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of PO:0009025 ! leaf ! seconds spent parsing GO:0010338: 5.12 ! parse: GO:0010342 using "endosperm cellularization" => cdef(GO:0007349, [OBO_REL:results_in_developmental_progression_of=PO:0009089]) [-2] ! no existing xp def ! def: "The separation of the multi-nucleate endosperm into individual cells. In many plant species, the endosperm that nurtures the embryo in the seed initially develops as a syncytium. This syncytial phase ends with simultaneous partitioning of the multi-nucleate cytoplasm into individual cells, a process referred to as cellularization." ! PROPOSED: cellularization that OBO_REL:results_in_developmental_progression_of endosperm [cdef(GO:0007349, [OBO_REL:results_in_developmental_progression_of=PO:0009089])] [Term] id: GO:0010342 ! cellularization of endosperm intersection_of: GO:0007349 ! cellularization intersection_of: OBO_REL:results_in_developmental_progression_of PO:0009089 ! endosperm ! seconds spent parsing GO:0010342: 13.85 ! parse: GO:0010344 using "oleosome biogenesis" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0012511]) [-2] ! parse: GO:0010344 using "spherosome biogenesis" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0012511]) [-2] ! no existing xp def ! def: "The assembly and arrangement of the seed oilbody. Seed oilbodies are simple organelles comprising a matrix of triacylglycerol surrounded by a phospholipid monolayer embedded and covered with unique proteins called oleosins. Seed oilbodies supply the energy requirements for the growth of the seedling after germination." ! PROPOSED: cellular component assembly that OBO_REL:results_in_creation_of monolayer-surrounded lipid storage body [cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0012511])] [Term] id: GO:0010344 ! seed oilbody biogenesis intersection_of: GO:0022607 ! cellular component assembly intersection_of: OBO_REL:results_in_creation_of GO:0012511 ! monolayer-surrounded lipid storage body synonym: "assembly and maintenance of lipid storage body (sensu Viridiplantae)" EXACT [OBOL:automatic] synonym: "assembly and maintenance of monolayer-surrounded lipid storage body" EXACT [OBOL:automatic] synonym: "assembly and maintenance of oil body" EXACT [OBOL:automatic] synonym: "assembly and maintenance of oleosome" EXACT [OBOL:automatic] synonym: "assembly and maintenance of spherosome" EXACT [OBOL:automatic] synonym: "assembly of lipid storage body (sensu Viridiplantae)" EXACT [OBOL:automatic] synonym: "assembly of monolayer-surrounded lipid storage body" EXACT [OBOL:automatic] synonym: "assembly of oil body" EXACT [OBOL:automatic] synonym: "assembly of oleosome" EXACT [OBOL:automatic] synonym: "assembly of spherosome" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of lipid storage body (sensu Viridiplantae)" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of monolayer-surrounded lipid storage body" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of oil body" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of oleosome" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of spherosome" EXACT [OBOL:automatic] synonym: "biogenesis of lipid storage body (sensu Viridiplantae)" EXACT [OBOL:automatic] synonym: "biogenesis of monolayer-surrounded lipid storage body" EXACT [OBOL:automatic] synonym: "biogenesis of oil body" EXACT [OBOL:automatic] synonym: "biogenesis of oleosome" EXACT [OBOL:automatic] synonym: "biogenesis of spherosome" EXACT [OBOL:automatic] synonym: "cell structure assembly of lipid storage body (sensu Viridiplantae)" EXACT [OBOL:automatic] synonym: "cell structure assembly of monolayer-surrounded lipid storage body" EXACT [OBOL:automatic] synonym: "cell structure assembly of oil body" EXACT [OBOL:automatic] synonym: "cell structure assembly of oleosome" EXACT [OBOL:automatic] synonym: "cell structure assembly of spherosome" EXACT [OBOL:automatic] synonym: "cellular component assembly of lipid storage body (sensu Viridiplantae)" EXACT [OBOL:automatic] synonym: "cellular component assembly of monolayer-surrounded lipid storage body" EXACT [OBOL:automatic] synonym: "cellular component assembly of oil body" EXACT [OBOL:automatic] synonym: "cellular component assembly of oleosome" EXACT [OBOL:automatic] synonym: "cellular component assembly of spherosome" EXACT [OBOL:automatic] synonym: "complex assembly of lipid storage body (sensu Viridiplantae)" EXACT [OBOL:automatic] synonym: "complex assembly of monolayer-surrounded lipid storage body" EXACT [OBOL:automatic] synonym: "complex assembly of oil body" EXACT [OBOL:automatic] synonym: "complex assembly of oleosome" EXACT [OBOL:automatic] synonym: "complex assembly of spherosome" EXACT [OBOL:automatic] synonym: "formation of lipid storage body (sensu Viridiplantae)" EXACT [OBOL:automatic] synonym: "formation of monolayer-surrounded lipid storage body" EXACT [OBOL:automatic] synonym: "formation of oil body" EXACT [OBOL:automatic] synonym: "formation of oleosome" EXACT [OBOL:automatic] synonym: "formation of spherosome" EXACT [OBOL:automatic] synonym: "lipid storage body (sensu Viridiplantae) assembly" EXACT [OBOL:automatic] synonym: "lipid storage body (sensu Viridiplantae) assembly and maintenance" EXACT [OBOL:automatic] synonym: "lipid storage body (sensu Viridiplantae) biogenesis" EXACT [OBOL:automatic] synonym: "lipid storage body (sensu Viridiplantae) biogenesis and assembly" EXACT [OBOL:automatic] synonym: "lipid storage body (sensu Viridiplantae) cell structure assembly" EXACT [OBOL:automatic] synonym: "lipid storage body (sensu Viridiplantae) cellular component assembly" EXACT [OBOL:automatic] synonym: "lipid storage body (sensu Viridiplantae) complex assembly" EXACT [OBOL:automatic] synonym: "lipid storage body (sensu Viridiplantae) formation" EXACT [OBOL:automatic] synonym: "monolayer-surrounded lipid storage body assembly" EXACT [OBOL:automatic] synonym: "monolayer-surrounded lipid storage body assembly and maintenance" EXACT [OBOL:automatic] synonym: "monolayer-surrounded lipid storage body biogenesis" EXACT [OBOL:automatic] synonym: "monolayer-surrounded lipid storage body biogenesis and assembly" EXACT [OBOL:automatic] synonym: "monolayer-surrounded lipid storage body cell structure assembly" EXACT [OBOL:automatic] synonym: "monolayer-surrounded lipid storage body cellular component assembly" EXACT [OBOL:automatic] synonym: "monolayer-surrounded lipid storage body complex assembly" EXACT [OBOL:automatic] synonym: "monolayer-surrounded lipid storage body formation" EXACT [OBOL:automatic] synonym: "oil body assembly" EXACT [OBOL:automatic] synonym: "oil body assembly and maintenance" EXACT [OBOL:automatic] synonym: "oil body biogenesis" EXACT [OBOL:automatic] synonym: "oil body biogenesis and assembly" EXACT [OBOL:automatic] synonym: "oil body cell structure assembly" EXACT [OBOL:automatic] synonym: "oil body cellular component assembly" EXACT [OBOL:automatic] synonym: "oil body complex assembly" EXACT [OBOL:automatic] synonym: "oil body formation" EXACT [OBOL:automatic] synonym: "oleosome assembly" EXACT [OBOL:automatic] synonym: "oleosome assembly and maintenance" EXACT [OBOL:automatic] synonym: "oleosome biogenesis and assembly" EXACT [OBOL:automatic] synonym: "oleosome cell structure assembly" EXACT [OBOL:automatic] synonym: "oleosome cellular component assembly" EXACT [OBOL:automatic] synonym: "oleosome complex assembly" EXACT [OBOL:automatic] synonym: "oleosome formation" EXACT [OBOL:automatic] synonym: "spherosome assembly" EXACT [OBOL:automatic] synonym: "spherosome assembly and maintenance" EXACT [OBOL:automatic] synonym: "spherosome biogenesis and assembly" EXACT [OBOL:automatic] synonym: "spherosome cell structure assembly" EXACT [OBOL:automatic] synonym: "spherosome cellular component assembly" EXACT [OBOL:automatic] synonym: "spherosome complex assembly" EXACT [OBOL:automatic] synonym: "spherosome formation" EXACT [OBOL:automatic] def: "The aggregation and bonding together of a set of macromolecules to form a lipid storage body (sensu Viridiplantae)" [OBOL:automatic] ! seconds spent parsing GO:0010344: 19.49 ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0010346 using "shoot formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=PO:0009006]) [-2] ! parse: GO:0010346 using "shoot formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=PO:0009006]) [-2] ! no existing xp def ! def: "The process that gives rise to a shoot. This process pertains to the initial formation of a structure from unspecified parts." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of shoot [cdef(GO:0048646, [OBO_REL:results_in_formation_of=PO:0009006])] [Term] id: GO:0010346 ! shoot formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of PO:0009006 ! shoot ! seconds spent parsing GO:0010346: 5.11 ! No parse for: GO:0010350 cellular response to magnesium starvation ! parse: GO:0010358 using "leaf structural organization" => cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=PO:0009025]) [-2] ! no existing xp def ! def: "The developmental process that pertains to the organization of a leaf in three-dimensional space once the structure has initially formed." ! PROPOSED: organization of an anatomical structure that OBO_REL:results_in_developmental_progression_of leaf [cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=PO:0009025])] [Term] id: GO:0010358 ! leaf shaping intersection_of: GO:0048532 ! organization of an anatomical structure intersection_of: OBO_REL:results_in_developmental_progression_of PO:0009025 ! leaf ! seconds spent parsing GO:0010358: 13.43 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0010374 using "stomatal complex development" => cdef(GO:0032502, [results_in_complete_developmental_of=PO:0002000]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the stomatal complex over time. From it formation to the mature structure. The stomatal complex is the stomatal guard cells and their associated epidermal cells." ! PROPOSED: developmental process that results_in_complete_developmental_of stomatal complex [cdef(GO:0032502, [results_in_complete_developmental_of=PO:0002000])] [Term] id: GO:0010374 ! stomatal complex development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of PO:0002000 ! stomatal complex ! seconds spent parsing GO:0010374: 4.66 ! parse: GO:0010375 using "stomatal complex patterning" => cdef(GO:0007389, [OBO_REL:results_in_patterning_for=PO:0002000]) [-2] ! no existing xp def ! def: "The regionalization process of establishing the non-random spatial arrangement of stomatal complex on the surface of a leaf. The stomatal complex is the stomatal guard cells and their associated epidermal cells." ! PROPOSED: pattern specification process that OBO_REL:results_in_patterning_for stomatal complex [cdef(GO:0007389, [OBO_REL:results_in_patterning_for=PO:0002000])] [Term] id: GO:0010375 ! stomatal complex patterning intersection_of: GO:0007389 ! pattern specification process intersection_of: OBO_REL:results_in_patterning_for PO:0002000 ! stomatal complex ! seconds spent parsing GO:0010375: 8.39 ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0010376 using "stomatal complex formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=PO:0002000]) [-2] ! parse: GO:0010376 using "stomatal complex formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=PO:0002000]) [-2] ! no existing xp def ! def: "The process that gives rise to the stomatal complex. This process pertains to the initial formation of a structure from unspecified parts. The stomatal complex is the stomatal guard cells and their associated epidermal cells." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of stomatal complex [cdef(GO:0048646, [OBO_REL:results_in_formation_of=PO:0002000])] [Term] id: GO:0010376 ! stomatal complex formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of PO:0002000 ! stomatal complex ! seconds spent parsing GO:0010376: 5.14 ! Already have xp for: GO:0010377 guard cell fate commitment ! CURRENT : cell fate commitment that OBO_REL:results_in_commitment_to guard cell [cdef(GO:0045165, [OBO_REL:results_in_commitment_to=CL:0000292])] ! No parse for: GO:0010382 cell wall metabolic process ! No parse for: GO:0010383 cell wall polysaccharide metabolic process ! No parse for: GO:0010384 cell wall proteoglycan metabolic process ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0010386 using "lateral root primordium development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=FBbt:00005495, OBO_REL:unfolds_in=PO:0020121]) [-3] ! parse: GO:0010386 using "lateral root primordium development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00005495, OBO_REL:unfolds_in=PO:0020121]) [-3] ! parse: GO:0010386 using "lateral root primordium development" => cdef(GO:0032502, [results_in_complete_developmental_of=PO:0000016]) [-2] ! parse: GO:0010386 using "lateral root primordium development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(FBbt:00005495, [OBO_REL:part_of=PO:0020121])]) [-3] ! no existing xp def ! def: "The process whose specific outcome is the progression of the lateral root primordium over time, which initiates the formation to the mature structure. A lateral root primordium represents an organized group of cells derived from the root pericycle that will differentiate into a new root, as opposed to the initiation of the main root from the embryo proper." ! PROPOSED: developmental process that results_in_complete_developmental_of lateral root primordium [cdef(GO:0032502, [results_in_complete_developmental_of=PO:0000016])] [Term] id: GO:0010386 ! lateral root primordium development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of PO:0000016 ! lateral root primordium ! seconds spent parsing GO:0010386: 10.92 ! parse: GO:0010387 using "signalosome assembly" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0008180]) [-2] ! no existing xp def ! def: "The aggregation and bonding together of a set of components to form a signalosome." ! PROPOSED: cellular component assembly that OBO_REL:results_in_creation_of signalosome [cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0008180])] [Term] id: GO:0010387 ! signalosome assembly intersection_of: GO:0022607 ! cellular component assembly intersection_of: OBO_REL:results_in_creation_of GO:0008180 ! signalosome synonym: "CSN assembly" EXACT [OBOL:automatic] synonym: "CSN assembly and maintenance" EXACT [OBOL:automatic] synonym: "CSN biogenesis" EXACT [OBOL:automatic] synonym: "CSN biogenesis and assembly" EXACT [OBOL:automatic] synonym: "CSN cell structure assembly" EXACT [OBOL:automatic] synonym: "CSN cellular component assembly" EXACT [OBOL:automatic] synonym: "CSN complex assembly" EXACT [OBOL:automatic] synonym: "CSN formation" EXACT [OBOL:automatic] synonym: "assembly and maintenance of CSN" EXACT [OBOL:automatic] synonym: "assembly and maintenance of signalosome" EXACT [OBOL:automatic] synonym: "assembly of CSN" EXACT [OBOL:automatic] synonym: "assembly of signalosome" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of CSN" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of signalosome" EXACT [OBOL:automatic] synonym: "biogenesis of CSN" EXACT [OBOL:automatic] synonym: "biogenesis of signalosome" EXACT [OBOL:automatic] synonym: "cell structure assembly of CSN" EXACT [OBOL:automatic] synonym: "cell structure assembly of signalosome" EXACT [OBOL:automatic] synonym: "cellular component assembly of CSN" EXACT [OBOL:automatic] synonym: "cellular component assembly of signalosome" EXACT [OBOL:automatic] synonym: "complex assembly of CSN" EXACT [OBOL:automatic] synonym: "complex assembly of signalosome" EXACT [OBOL:automatic] synonym: "formation of CSN" EXACT [OBOL:automatic] synonym: "formation of signalosome" EXACT [OBOL:automatic] synonym: "signalosome assembly and maintenance" EXACT [OBOL:automatic] synonym: "signalosome biogenesis" EXACT [OBOL:automatic] synonym: "signalosome biogenesis and assembly" EXACT [OBOL:automatic] synonym: "signalosome cell structure assembly" EXACT [OBOL:automatic] synonym: "signalosome cellular component assembly" EXACT [OBOL:automatic] synonym: "signalosome complex assembly" EXACT [OBOL:automatic] synonym: "signalosome formation" EXACT [OBOL:automatic] def: "The aggregation and bonding together of a set of macromolecules to form a CSN" [OBOL:automatic] ! seconds spent parsing GO:0010387: 5.56 ! No parse for: GO:0010404 cell wall hydroxyproline-rich glycoprotein metabolic process ! No parse for: GO:0010408 fasciclin-like arabinogalactan protein metabolic process ! No parse for: GO:0010409 extensin metabolic process ! parse: GO:0010431 using "seed maturation" => cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=PO:0009010]) [-2] ! no existing xp def ! def: "A process in seed development that occurs after embryogenesis by which a quiescent state is established in a seed. Seed maturation is characterized by storage compound accumulation, acquisition of desiccation tolerance, growth arrest and the entry into a dormancy period of variable length that is broken upon germination." ! PROPOSED: developmental maturation that OBO_REL:results_in_developmental_progression_of seed [cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=PO:0009010])] [Term] id: GO:0010431 ! seed maturation intersection_of: GO:0021700 ! developmental maturation intersection_of: OBO_REL:results_in_developmental_progression_of PO:0009010 ! seed ! seconds spent parsing GO:0010431: 4.66 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0010432 using "bract development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00005180]) [-2] ! parse: GO:0010432 using "bract development" => cdef(GO:0032502, [results_in_complete_developmental_of=PO:0009055]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the bract over time, from its formation to the mature structure. A bract is a leaf, usually different in form from the foliage leaves, subtending a flower or inflorescence." ! PROPOSED: developmental process that results_in_complete_developmental_of bract [cdef(GO:0032502, [results_in_complete_developmental_of=PO:0009055])] [Term] id: GO:0010432 ! bract development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of PO:0009055 ! bract ! seconds spent parsing GO:0010432: 5.3 ! parse: GO:0010433 using "bract morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00005180]) [-2] ! parse: GO:0010433 using "bract morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=PO:0009055]) [-2] ! no existing xp def ! def: "The process by which the anatomical structure of bract are generated and organized. A bract is a leaf, usually different in form from the foliage leaves, subtending a flower or inflorescence. Morphogenesis pertains to the creation of form." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of bract [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=PO:0009055])] [Term] id: GO:0010433 ! bract morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of PO:0009055 ! bract ! seconds spent parsing GO:0010433: 6.12 ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0010434 using "bract formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=FBbt:00005180]) [-2] ! parse: GO:0010434 using "bract formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=PO:0009055]) [-2] ! parse: GO:0010434 using "bract formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=FBbt:00005180]) [-2] ! parse: GO:0010434 using "bract formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=PO:0009055]) [-2] ! no existing xp def ! def: "The process that gives rise to a bract. This process pertains to the initial formation of a structure from unspecified parts. A bract is a leaf, usually different in form from the foliage leaves, subtending a flower or inflorescence." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of bract [cdef(GO:0048646, [OBO_REL:results_in_formation_of=PO:0009055])] [Term] id: GO:0010434 ! bract formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of PO:0009055 ! bract ! seconds spent parsing GO:0010434: 6.22 ! Already have xp for: GO:0014001 sclerenchyma cell differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of sclerenchyma cell [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000276])] ! Already have xp for: GO:0014002 astrocyte development ! CURRENT : developmental process that OBO_REL:results_in_developmental_progression_of astrocyte [cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=CL:0000127])] ! Already have xp for: GO:0014003 oligodendrocyte development ! CURRENT : developmental process that OBO_REL:results_in_developmental_progression_of oligodendrocyte [cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=CL:0000128])] ! Already have xp for: GO:0014004 microglia differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of microglial cell [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000129])] ! Already have xp for: GO:0014005 microglia development ! CURRENT : developmental process that OBO_REL:results_in_developmental_progression_of microglial cell [cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=CL:0000129])] ! Already have xp for: GO:0014009 glial cell proliferation ! CURRENT : cell proliferation that OBO_REL:increases_population_size_of glial cell [cdef(GO:0008283, [OBO_REL:increases_population_size_of=CL:0000125])] ! Already have xp for: GO:0014010 Schwann cell proliferation ! CURRENT : cell proliferation that OBO_REL:increases_population_size_of Schwann cell [cdef(GO:0008283, [OBO_REL:increases_population_size_of=CL:0000218])] ! Already have xp for: GO:0014011 Schwann cell proliferation involved in axon regeneration ! CURRENT : Schwann cell proliferation that OBO_REL:part_of axon regeneration [cdef(GO:0014010, [OBO_REL:part_of=GO:0031103])] ! Already have xp for: GO:0014012 axon regeneration in the peripheral nervous system ! CURRENT : axon regeneration that OBO_REL:unfolds_in peripheral nervous system [cdef(GO:0031103, [OBO_REL:unfolds_in=continuant:peripheral_nervous_system])] ! Already have xp for: GO:0014016 neuroblast differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of neuroblast [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000031])] ! Already have xp for: GO:0014017 neuroblast fate commitment ! CURRENT : cell fate commitment that OBO_REL:results_in_commitment_to neuroblast [cdef(GO:0045165, [OBO_REL:results_in_commitment_to=CL:0000031])] ! Already have xp for: GO:0014018 neuroblast fate specification ! CURRENT : cell fate specification that OBO_REL:results_in_specification_of neuroblast [cdef(GO:0001708, [OBO_REL:results_in_specification_of=CL:0000031])] ! Already have xp for: GO:0014019 neuroblast development ! CURRENT : developmental process that OBO_REL:results_in_developmental_progression_of neuroblast [cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=CL:0000031])] ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0014021 using "medullary cord formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(medullary cord, anatomy)]) [-15] ! parse: GO:0014021 using "secondary neural tube formation" => cdef(GO:0001841, [OBO_REL:results_in_developmental_progression_of=anon(secondary, anatomy)]) [-10] ! parse: GO:0014021 using "secondary neural tube formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(secondary neural tube, anatomy)]) [-22] ! parse: GO:0014021 using "secondary neurulation" => cdef(GO:0001841, [OBO_REL:results_in_developmental_progression_of=anon(secondary, anatomy)]) [-10] ! no existing xp def ! def: "The formation of the neural tube by coalescence of mesenchymal cells followed by their conversion to epithelial cells to form a solid cord that subsequently hollows out (cavitates) to create a hollow tube. Secondary neurulation is the typical mechanism of formation of the neural tube posterior to the posterior neuropore in mammals." ! PROPOSED: neural tube formation that OBO_REL:results_in_developmental_progression_of anon(secondary, anatomy) [cdef(GO:0001841, [OBO_REL:results_in_developmental_progression_of=anon(secondary, anatomy)])] [Term] id: GO:0014021 ! secondary neural tube formation intersection_of: GO:0001841 ! neural tube formation intersection_of: OBO_REL:results_in_developmental_progression_of anatomy:secondary synonym: "secondary neural tube morphogenesis" EXACT [OBOL:automatic] ! seconds spent parsing GO:0014021: 22.01 ! No relation defined: results_in_increased_length_of ! parse: GO:0014022 using "neural plate elongation" => cdef(GO:0008150, [results_in_increased_length_of=ZFA:0000132]) [-2] ! no existing xp def ! def: "The process by which the neural plate is shaped by the intrinsic movement of the epidermal and neural plate regions." ! PROPOSED: biological_process that results_in_increased_length_of neural plate [cdef(GO:0008150, [results_in_increased_length_of=ZFA:0000132])] [Term] id: GO:0014022 ! neural plate elongation intersection_of: GO:0008150 ! biological_process intersection_of: results_in_increased_length_of ZFA:0000132 ! neural plate synonym: "elongation of presumptive central nervous system" EXACT [OBOL:automatic] synonym: "presumptive central nervous system elongation" EXACT [OBOL:automatic] ! seconds spent parsing GO:0014022: 4.77 ! No parse for: GO:0014023 neural rod formation (sensu Teleost) ! No parse for: GO:0014024 neural rod cavitation (sensu Teleost) ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0014025 using "neural keel formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=ZFA:0000131]) [-2] ! parse: GO:0014025 using "neural keel formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0000131]) [-2] ! no existing xp def ! def: "The formation of a thickened region of the neurectoderm that is roughly triangular in cross section. The neural keel develops from the neural plate and develops into the neural rod. Neural keel formation occurs during primary neurulation in teleosts." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of neural keel [cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0000131])] [Term] id: GO:0014025 ! neural keel formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of ZFA:0000131 ! neural keel synonym: "presumptive central nervous system anatomical structure formation" EXACT [OBOL:automatic] synonym: "presumptive central nervous system formation" EXACT [OBOL:automatic] synonym: "presumptive central nervous system formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0014025: 5.14 ! No parse for: GO:0014027 secondary neural tube rod cavitation ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0014028 using "notochord formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=ZFA:0000135]) [-2] ! parse: GO:0014028 using "notochord formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0000135]) [-2] ! no existing xp def ! def: "The formation of the notochord from the chordamesoderm. The notochord is composed of large cells packed within a firm connective tissue sheath and is found in all chordates at the ventral surface of the neural tube. In vertebrates, the notochord contributes to the vertebral column." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of notochord [cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0000135])] [Term] id: GO:0014028 ! notochord formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of ZFA:0000135 ! notochord ! seconds spent parsing GO:0014028: 5.13 ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0014029 using "neural crest formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=ZFA:0000045]) [-2] ! parse: GO:0014029 using "neural crest formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0000045]) [-2] ! no existing xp def ! def: "The formation of the specialized region of ectoderm between the neural ectoderm (neural plate) and non-neural ectoderm. The neural crest gives rise to the neural crest cells that migrate away from this region as neural tube formation procedes." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of neural crest [cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0000045])] [Term] id: GO:0014029 ! neural crest formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of ZFA:0000045 ! neural crest ! seconds spent parsing GO:0014029: 5.13 ! Already have xp for: GO:0014030 mesenchymal cell fate commitment ! CURRENT : cell fate commitment that OBO_REL:results_in_commitment_to mesenchymal cell [cdef(GO:0045165, [OBO_REL:results_in_commitment_to=CL:0000134])] ! Already have xp for: GO:0014031 mesenchymal cell development ! CURRENT : developmental process that OBO_REL:results_in_developmental_progression_of mesenchymal cell [cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=CL:0000134])] ! Already have xp for: GO:0014032 neural crest cell development ! CURRENT : developmental process that OBO_REL:results_in_developmental_progression_of neural crest cell [cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=CL:0000333])] ! Already have xp for: GO:0014033 neural crest cell differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of neural crest cell [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000333])] ! Already have xp for: GO:0014034 neural crest cell fate commitment ! CURRENT : cell fate commitment that OBO_REL:results_in_commitment_to neural crest cell [cdef(GO:0045165, [OBO_REL:results_in_commitment_to=CL:0000333])] ! Already have xp for: GO:0014035 neural crest cell fate determination ! CURRENT : cell fate determination that OBO_REL:results_in_determination_to neural crest cell [cdef(GO:0001709, [OBO_REL:results_in_determination_to=CL:0000333])] ! Already have xp for: GO:0014036 neural crest cell fate specification ! CURRENT : cell fate specification that OBO_REL:results_in_specification_of neural crest cell [cdef(GO:0001708, [OBO_REL:results_in_specification_of=CL:0000333])] ! Already have xp for: GO:0014037 Schwann cell differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of Schwann cell [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000218])] ! Already have xp for: GO:0014044 Schwann cell development ! CURRENT : developmental process that OBO_REL:results_in_developmental_progression_of Schwann cell [cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=CL:0000218])] ! No parse for: GO:0014065 phosphoinositide 3-kinase cascade ! No parse for: GO:0015032 storage protein import into fat body ! parse: GO:0015679 using "plasma membrane copper ion transport" => cdef(GO:0006825, [OBO_REL:results_in_transport_of=GO:0005886]) [-2] ! parse: GO:0015679 using "plasma membrane copper ion transport" => cdef(GO:0006825, [OBO_REL:results_in_transport_of=GO:0016020, OBO_REL:unfolds_in=MA:0002501]) [-3] ! no existing xp def ! def: "The directed movement of copper ions across the plasma membrane." ! PROPOSED: copper ion transport that OBO_REL:results_in_transport_of plasma membrane [cdef(GO:0006825, [OBO_REL:results_in_transport_of=GO:0005886])] [Term] id: GO:0015679 ! plasma membrane copper ion transport intersection_of: GO:0006825 ! copper ion transport intersection_of: OBO_REL:results_in_transport_of GO:0005886 ! plasma membrane synonym: "cell membrane copper ion transport" EXACT [OBOL:automatic] synonym: "cytoplasmic membrane copper ion transport" EXACT [OBOL:automatic] synonym: "plasma membrane cation-transporting ATPase copper ion transport" EXACT [OBOL:automatic] synonym: "plasma membrane copper transporter copper ion transport" EXACT [OBOL:automatic] synonym: "plasma membrane long-chain fatty acid transporter copper ion transport" EXACT [OBOL:automatic] synonym: "plasmalemma copper ion transport" EXACT [OBOL:automatic] ! seconds spent parsing GO:0015679: 33.25 ! parse: GO:0015680 using "intracellular copper ion transport" => cdef(GO:0006825, [OBO_REL:results_in_transport_of=GO:0005622]) [-2] ! no existing xp def ! def: "The directed movement of copper (Cu) ions within a cell." ! PROPOSED: copper ion transport that OBO_REL:results_in_transport_of intracellular [cdef(GO:0006825, [OBO_REL:results_in_transport_of=GO:0005622])] [Term] id: GO:0015680 ! intracellular copper ion transport intersection_of: GO:0006825 ! copper ion transport intersection_of: OBO_REL:results_in_transport_of GO:0005622 ! intracellular synonym: "protoplasm copper ion transport" EXACT [OBOL:automatic] ! seconds spent parsing GO:0015680: 17.06 ! No parse for: GO:0015695 organic cation transport ! No parse for: GO:0015711 organic anion transport ! No parse for: GO:0015721 bile acid and bile salt transport ! No parse for: GO:0015742 alpha-ketoglutarate transport ! No parse for: GO:0015743 malate transport ! No parse for: GO:0015748 organophosphate ester transport ! parse: GO:0015776 using "capsule polysaccharide transport" => cdef(GO:0015774, [OBO_REL:results_in_transport_of=GO:0042603]) [-2] ! no existing xp def ! def: "The directed movement of capsular polysaccharides into, out of, within or between cells. Capsular polysaccharides make up the capsule, a protective structure surrounding some species of bacteria and fungi." ! PROPOSED: polysaccharide transport that OBO_REL:results_in_transport_of capsule [cdef(GO:0015774, [OBO_REL:results_in_transport_of=GO:0042603])] [Term] id: GO:0015776 ! capsular polysaccharide transport intersection_of: GO:0015774 ! polysaccharide transport intersection_of: OBO_REL:results_in_transport_of GO:0042603 ! capsule synonym: "capsule (sensu Bacteria) polysaccharide transport" EXACT [OBOL:automatic] synonym: "capsule (sensu Fungi) polysaccharide transport" EXACT [OBOL:automatic] ! seconds spent parsing GO:0015776: 18.81 ! No parse for: GO:0015803 branched-chain aliphatic amino acid transport ! No parse for: GO:0015810 aspartate transport ! No parse for: GO:0015813 glutamate transport ! No parse for: GO:0015834 peptidoglycan peptide transport ! No parse for: GO:0015835 peptidoglycan transport ! parse: GO:0015841 using "chromaffin granule amine transport" => cdef(GO:0015837, [OBO_REL:results_in_transport_of=GO:0042583]) [-2] ! no existing xp def ! PROPOSED: amine transport that OBO_REL:results_in_transport_of chromaffin granule [cdef(GO:0015837, [OBO_REL:results_in_transport_of=GO:0042583])] [Term] id: GO:0015841 ! chromaffin granule amine transport intersection_of: GO:0015837 ! amine transport intersection_of: OBO_REL:results_in_transport_of GO:0042583 ! chromaffin granule ! seconds spent parsing GO:0015841: 10.25 ! parse: GO:0015842 using "synaptic vesicle amine transport" => cdef(GO:0015837, [OBO_REL:results_in_transport_of=GO:0008021]) [-2] ! no existing xp def ! def: "The directed movement of amines into, out of or within synaptic vesicles." ! PROPOSED: amine transport that OBO_REL:results_in_transport_of synaptic vesicle [cdef(GO:0015837, [OBO_REL:results_in_transport_of=GO:0008021])] [Term] id: GO:0015842 ! synaptic vesicle amine transport intersection_of: GO:0015837 ! amine transport intersection_of: OBO_REL:results_in_transport_of GO:0008021 ! synaptic vesicle ! seconds spent parsing GO:0015842: 6.14 ! Already have xp for: GO:0015848 spermidine transport ! CURRENT : transport that OBO_REL:results_in_transport_of spermidine [cdef(GO:0006810, [OBO_REL:results_in_transport_of=cell:spermidine])] ! No parse for: GO:0015849 organic acid transport ! No parse for: GO:0015850 organic alcohol transport ! parse: GO:0015859 using "intracellular nucleoside transport" => cdef(GO:0015858, [OBO_REL:results_in_transport_of=GO:0005622]) [-2] ! no existing xp def ! def: "The directed movement of a nucleoside, a nucleobase linked to either beta-D-ribofuranose (ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleotide), within a cell." ! PROPOSED: nucleoside transport that OBO_REL:results_in_transport_of intracellular [cdef(GO:0015858, [OBO_REL:results_in_transport_of=GO:0005622])] [Term] id: GO:0015859 ! intracellular nucleoside transport intersection_of: GO:0015858 ! nucleoside transport intersection_of: OBO_REL:results_in_transport_of GO:0005622 ! intracellular synonym: "protoplasm nucleoside transport" EXACT [OBOL:automatic] ! seconds spent parsing GO:0015859: 11.16 ! No parse for: GO:0015897 organomercurial transport ! No parse for: GO:0015910 peroxisomal long-chain fatty acid import ! parse: GO:0015911 using "plasma membrane long-chain fatty acid transport" => cdef(GO:0015909, [OBO_REL:results_in_transport_of=GO:0005886]) [-2] ! parse: GO:0015911 using "plasma membrane long-chain fatty acid transport" => cdef(GO:0015909, [OBO_REL:results_in_transport_of=GO:0016020, OBO_REL:unfolds_in=MA:0002501]) [-3] ! no existing xp def ! def: "The directed movement of long-chain fatty acids across the plasma membrane." ! PROPOSED: long-chain fatty acid transport that OBO_REL:results_in_transport_of plasma membrane [cdef(GO:0015909, [OBO_REL:results_in_transport_of=GO:0005886])] [Term] id: GO:0015911 ! plasma membrane long-chain fatty acid transport intersection_of: GO:0015909 ! long-chain fatty acid transport intersection_of: OBO_REL:results_in_transport_of GO:0005886 ! plasma membrane synonym: "cell membrane long-chain fatty acid transport" EXACT [OBOL:automatic] synonym: "cytoplasmic membrane long-chain fatty acid transport" EXACT [OBOL:automatic] synonym: "plasma membrane cation-transporting ATPase long-chain fatty acid transport" EXACT [OBOL:automatic] synonym: "plasma membrane copper transporter long-chain fatty acid transport" EXACT [OBOL:automatic] synonym: "plasma membrane long-chain fatty acid transporter long-chain fatty acid transport" EXACT [OBOL:automatic] synonym: "plasmalemma long-chain fatty acid transport" EXACT [OBOL:automatic] ! seconds spent parsing GO:0015911: 17.67 ! parse: GO:0015919 using "peroxisomal membrane transport" => cdef(GO:0006810, [OBO_REL:results_in_transport_of=GO:0005778]) [-2] ! no existing xp def ! def: "The directed movement of substances to, from or across the peroxisomal membrane." ! PROPOSED: transport that OBO_REL:results_in_transport_of peroxisomal membrane [cdef(GO:0006810, [OBO_REL:results_in_transport_of=GO:0005778])] [Term] id: GO:0015919 ! peroxisomal membrane transport intersection_of: GO:0006810 ! transport intersection_of: OBO_REL:results_in_transport_of GO:0005778 ! peroxisomal membrane synonym: "peroxisome integral membrane receptor hydrolase activity, acting on acid anhydrides, acting on GTP, involved in cellular and subcellular movement" EXACT [OBOL:automatic] synonym: "peroxisome integral membrane receptor transport" EXACT [OBOL:automatic] ! seconds spent parsing GO:0015919: 6.09 ! No parse for: GO:0015975 energy derivation by oxidation of reduced inorganic compounds ! No parse for: GO:0015980 energy derivation by oxidation of organic compounds ! No parse for: GO:0016031 cytoplasmic tRNA import into mitochondrion ! No parse for: GO:0016036 cellular response to phosphate starvation ! No parse for: GO:0016043 cellular component organization and biogenesis ! parse: GO:0016044 using "membrane organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0016020]) [-2] ! no existing xp def ! def: "A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of membranes inside and surrounding the cell." ! PROPOSED: cellular component organization and biogenesis that OBO_REL:results_in_structural_change_to membrane [cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0016020])] [Term] id: GO:0016044 ! membrane organization and biogenesis intersection_of: GO:0016043 ! cellular component organization and biogenesis intersection_of: OBO_REL:results_in_structural_change_to GO:0016020 ! membrane synonym: "membrane organization" EXACT [OBOL:automatic] ! seconds spent parsing GO:0016044: 0.06 ! Already have xp for: GO:0016049 cell growth ! CURRENT : growth that OBO_REL:part_of cellularization [cdef(GO:0040007, [OBO_REL:part_of=GO:0007349])] ! parse: GO:0016050 using "vesicle organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0031982]) [-2] ! no existing xp def ! def: "A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of any vesicle." ! PROPOSED: cellular component organization and biogenesis that OBO_REL:results_in_structural_change_to vesicle [cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0031982])] [Term] id: GO:0016050 ! vesicle organization and biogenesis intersection_of: GO:0016043 ! cellular component organization and biogenesis intersection_of: OBO_REL:results_in_structural_change_to GO:0031982 ! vesicle synonym: "vesicle organization" EXACT [OBOL:automatic] ! seconds spent parsing GO:0016050: 11.11 ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0016053 using "organic acid formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(organic acid, anatomy)]) [-13] ! no existing xp def ! def: "The chemical reactions and pathways resulting in the formation of organic acids, any acidic compound containing carbon in covalent linkage." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of anon(organic acid, anatomy) [cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(organic acid, anatomy)])] [Term] id: GO:0016053 ! organic acid biosynthetic process intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of anatomy:organic_acid synonym: "organic acid anatomical structure formation" EXACT [OBOL:automatic] synonym: "organic acid formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0016053: 21.03 ! No parse for: GO:0016054 organic acid catabolic process ! No parse for: GO:0016064 immunoglobulin mediated immune response ! No parse for: GO:0016078 tRNA catabolic process ! parse: GO:0016079 using "synaptic vesicle exocytosis" => cdef(GO:0006887, [OBO_REL:results_in_transport_of=GO:0008021]) [-2] ! no existing xp def ! def: "Fusion of intracellular membrane-bound vesicles with the pre-synaptic membrane of the neuronal cell resulting in release of neurotransmitter into the synaptic cleft." ! PROPOSED: exocytosis that OBO_REL:results_in_transport_of synaptic vesicle [cdef(GO:0006887, [OBO_REL:results_in_transport_of=GO:0008021])] [Term] id: GO:0016079 ! synaptic vesicle exocytosis intersection_of: GO:0006887 ! exocytosis intersection_of: OBO_REL:results_in_transport_of GO:0008021 ! synaptic vesicle ! seconds spent parsing GO:0016079: 6.12 ! No parse for: GO:0016080 synaptic vesicle targeting ! No parse for: GO:0016081 synaptic vesicle docking during exocytosis ! No parse for: GO:0016082 synaptic vesicle priming ! No parse for: GO:0016182 endosome to synaptic vesicle budding ! No parse for: GO:0016183 synaptic vesicle coating ! No parse for: GO:0016185 synaptic vesicle budding ! parse: GO:0016188 using "synaptic vesicle maturation" => cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=GO:0008021]) [-2] ! no existing xp def ! def: "Steps required to form an initiated synaptic vesicle into a fully formed and transmissible synaptic vesicle." ! PROPOSED: developmental maturation that OBO_REL:results_in_developmental_progression_of synaptic vesicle [cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=GO:0008021])] [Term] id: GO:0016188 ! synaptic vesicle maturation intersection_of: GO:0021700 ! developmental maturation intersection_of: OBO_REL:results_in_developmental_progression_of GO:0008021 ! synaptic vesicle synonym: "synaptic vesicle developmental maturation" EXACT [OBOL:automatic] ! seconds spent parsing GO:0016188: 5.55 ! No parse for: GO:0016189 synaptic vesicle to endosome fusion ! No parse for: GO:0016191 synaptic vesicle uncoating ! parse: GO:0016192 using "synaptic vesicle fission" => cdef(GO:0009987, [OBO_REL:results_in_division_of=GO:0008021]) [-2] ! parse: GO:0016192 using "vesicle transport" => cdef(GO:0006810, [OBO_REL:results_in_transport_of=GO:0031982]) [-2] ! no existing xp def ! def: "The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell." ! PROPOSED: cellular process that OBO_REL:results_in_division_of synaptic vesicle [cdef(GO:0009987, [OBO_REL:results_in_division_of=GO:0008021])] [Term] id: GO:0016192 ! vesicle-mediated transport intersection_of: GO:0009987 ! cellular process intersection_of: OBO_REL:results_in_division_of GO:0008021 ! synaptic vesicle def: "The creation of two or more GO:0008021 s by division of one GO:0008021" [OBOL:automatic] ! seconds spent parsing GO:0016192: 38.96 ! parse: GO:0016197 using "endosome transport" => cdef(GO:0006810, [OBO_REL:results_in_transport_of=GO:0005768]) [-2] ! no existing xp def ! def: "The directed movement of substances into, out of or mediated by an endosome, a membrane-bound organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation." ! PROPOSED: transport that OBO_REL:results_in_transport_of endosome [cdef(GO:0006810, [OBO_REL:results_in_transport_of=GO:0005768])] [Term] id: GO:0016197 ! endosome transport intersection_of: GO:0006810 ! transport intersection_of: OBO_REL:results_in_transport_of GO:0005768 ! endosome synonym: "endosomal oligosaccharide transporter hydrolase activity, acting on acid anhydrides, acting on GTP, involved in cellular and subcellular movement" EXACT [OBOL:automatic] synonym: "endosomal oligosaccharide transporter transport" EXACT [OBOL:automatic] ! seconds spent parsing GO:0016197: 0.03 ! No parse for: GO:0016198 axon choice point recognition ! No parse for: GO:0016199 axon midline choice point recognition ! No parse for: GO:0016203 muscle attachment ! No parse for: GO:0016233 telomere capping ! No parse for: GO:0016240 autophagic vacuole docking ! parse: GO:0016264 using "gap junction assembly" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0005921]) [-2] ! no existing xp def ! def: "Assembly of gap junctions, which are found in most animal tissues, and serve as direct connections between the cytoplasms of adjacent cells. They provide open channels through the plasma membrane, allowing ions and small molecules (less than approximately a thousand daltons) to diffuse freely between neighboring cells, but preventing the passage of proteins and nucleic acids." ! PROPOSED: cellular component assembly that OBO_REL:results_in_creation_of gap junction [cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0005921])] [Term] id: GO:0016264 ! gap junction assembly intersection_of: GO:0022607 ! cellular component assembly intersection_of: OBO_REL:results_in_creation_of GO:0005921 ! gap junction synonym: "assembly and maintenance of communicating junction" EXACT [OBOL:automatic] synonym: "assembly and maintenance of gap junction" EXACT [OBOL:automatic] synonym: "assembly and maintenance of macula communicans" EXACT [OBOL:automatic] synonym: "assembly and maintenance of zonula communicans" EXACT [OBOL:automatic] synonym: "assembly of communicating junction" EXACT [OBOL:automatic] synonym: "assembly of gap junction" EXACT [OBOL:automatic] synonym: "assembly of macula communicans" EXACT [OBOL:automatic] synonym: "assembly of zonula communicans" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of communicating junction" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of gap junction" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of macula communicans" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of zonula communicans" EXACT [OBOL:automatic] synonym: "biogenesis of communicating junction" EXACT [OBOL:automatic] synonym: "biogenesis of gap junction" EXACT [OBOL:automatic] synonym: "biogenesis of macula communicans" EXACT [OBOL:automatic] synonym: "biogenesis of zonula communicans" EXACT [OBOL:automatic] synonym: "cell structure assembly of communicating junction" EXACT [OBOL:automatic] synonym: "cell structure assembly of gap junction" EXACT [OBOL:automatic] synonym: "cell structure assembly of macula communicans" EXACT [OBOL:automatic] synonym: "cell structure assembly of zonula communicans" EXACT [OBOL:automatic] synonym: "cellular component assembly of communicating junction" EXACT [OBOL:automatic] synonym: "cellular component assembly of gap junction" EXACT [OBOL:automatic] synonym: "cellular component assembly of macula communicans" EXACT [OBOL:automatic] synonym: "cellular component assembly of zonula communicans" EXACT [OBOL:automatic] synonym: "communicating junction assembly" EXACT [OBOL:automatic] synonym: "communicating junction assembly and maintenance" EXACT [OBOL:automatic] synonym: "communicating junction biogenesis" EXACT [OBOL:automatic] synonym: "communicating junction biogenesis and assembly" EXACT [OBOL:automatic] synonym: "communicating junction cell structure assembly" EXACT [OBOL:automatic] synonym: "communicating junction cellular component assembly" EXACT [OBOL:automatic] synonym: "communicating junction complex assembly" EXACT [OBOL:automatic] synonym: "communicating junction formation" EXACT [OBOL:automatic] synonym: "complex assembly of communicating junction" EXACT [OBOL:automatic] synonym: "complex assembly of gap junction" EXACT [OBOL:automatic] synonym: "complex assembly of macula communicans" EXACT [OBOL:automatic] synonym: "complex assembly of zonula communicans" EXACT [OBOL:automatic] synonym: "formation of communicating junction" EXACT [OBOL:automatic] synonym: "formation of gap junction" EXACT [OBOL:automatic] synonym: "formation of macula communicans" EXACT [OBOL:automatic] synonym: "formation of zonula communicans" EXACT [OBOL:automatic] synonym: "gap junction assembly and maintenance" EXACT [OBOL:automatic] synonym: "gap junction biogenesis" EXACT [OBOL:automatic] synonym: "gap junction biogenesis and assembly" EXACT [OBOL:automatic] synonym: "gap junction cell structure assembly" EXACT [OBOL:automatic] synonym: "gap junction cellular component assembly" EXACT [OBOL:automatic] synonym: "gap junction complex assembly" EXACT [OBOL:automatic] synonym: "gap junction formation" EXACT [OBOL:automatic] synonym: "macula communicans assembly" EXACT [OBOL:automatic] synonym: "macula communicans assembly and maintenance" EXACT [OBOL:automatic] synonym: "macula communicans biogenesis" EXACT [OBOL:automatic] synonym: "macula communicans biogenesis and assembly" EXACT [OBOL:automatic] synonym: "macula communicans cell structure assembly" EXACT [OBOL:automatic] synonym: "macula communicans cellular component assembly" EXACT [OBOL:automatic] synonym: "macula communicans complex assembly" EXACT [OBOL:automatic] synonym: "macula communicans formation" EXACT [OBOL:automatic] synonym: "zonula communicans assembly" EXACT [OBOL:automatic] synonym: "zonula communicans assembly and maintenance" EXACT [OBOL:automatic] synonym: "zonula communicans biogenesis" EXACT [OBOL:automatic] synonym: "zonula communicans biogenesis and assembly" EXACT [OBOL:automatic] synonym: "zonula communicans cell structure assembly" EXACT [OBOL:automatic] synonym: "zonula communicans cellular component assembly" EXACT [OBOL:automatic] synonym: "zonula communicans complex assembly" EXACT [OBOL:automatic] synonym: "zonula communicans formation" EXACT [OBOL:automatic] def: "The aggregation and bonding together of a set of macromolecules to form a communicating junction" [OBOL:automatic] ! seconds spent parsing GO:0016264: 5.57 ! parse: GO:0016271 using "tissue death" => cdef(GO:0016265, [OBO_REL:results_in_developmental_progression_of=PO:0009007]) [-2] ! no existing xp def ! PROPOSED: death that OBO_REL:results_in_developmental_progression_of tissue [cdef(GO:0016265, [OBO_REL:results_in_developmental_progression_of=PO:0009007])] [Term] id: GO:0016271 ! tissue death intersection_of: GO:0016265 ! death intersection_of: OBO_REL:results_in_developmental_progression_of PO:0009007 ! tissue ! seconds spent parsing GO:0016271: 5.08 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0016319 using "mushroom body development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00005801]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the mushroom body over time, from its formation to the mature structure. The mushroom body is composed of the prominent neuropil structures of the insect central brain, thought to be crucial for olfactory associated learning. These consist mainly of a bulbous calyx and tightly packaged arrays of thin parallel fibers of the Kenyon cells." ! PROPOSED: developmental process that results_in_complete_developmental_of mushroom body [cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00005801])] [Term] id: GO:0016319 ! mushroom body development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of FBbt:00005801 ! mushroom body ! seconds spent parsing GO:0016319: 4.69 ! No parse for: GO:0016320 endoplasmic reticulum membrane fusion ! No parse for: GO:0016322 neuron remodeling ! Already have xp for: GO:0016325 oocyte microtubule cytoskeleton organization ! CURRENT : cellular component organization and biogenesis that OBO_REL:results_in_structural_change_to microtubule cytoskeleton and OBO_REL:unfolds_in oocyte [cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0015630, OBO_REL:unfolds_in=CL:0000023])] ! parse: GO:0016337 using "cell-cell adhesion" => cdef(GO:0022610, [OBO_REL:results_in_adhesion_to=CL:0000000, OBO_REL:results_in_adhesion_to=CL:0000000]) [-3] ! parse: GO:0016337 using "cell-cell adhesion" => cdef(GO:0022610, [OBO_REL:results_in_adhesion_to=ZFA:0009000, OBO_REL:results_in_adhesion_to=ZFA:0009000]) [-3] ! no existing xp def ! def: "The attachment of one cell to another cell via adhesion molecules." ! PROPOSED: biological adhesion that OBO_REL:results_in_adhesion_to cell and OBO_REL:results_in_adhesion_to cell [cdef(GO:0022610, [OBO_REL:results_in_adhesion_to=ZFA:0009000, OBO_REL:results_in_adhesion_to=ZFA:0009000])] [Term] id: GO:0016337 ! cell-cell adhesion intersection_of: GO:0022610 ! biological adhesion intersection_of: OBO_REL:results_in_adhesion_to ZFA:0009000 ! cell intersection_of: OBO_REL:results_in_adhesion_to ZFA:0009000 ! cell ! seconds spent parsing GO:0016337: 12.1 ! Already have xp for: GO:0016344 meiotic chromosome movement towards spindle pole ! CURRENT : chromosome movement towards spindle pole that OBO_REL:part_of meiosis [cdef(GO:0051305, [OBO_REL:part_of=GO:0007126])] ! Already have xp for: GO:0016345 female meiotic chromosome movement towards spindle pole ! CURRENT : chromosome movement towards spindle pole that OBO_REL:part_of female meiosis [cdef(GO:0051305, [OBO_REL:part_of=GO:0007143])] ! Already have xp for: GO:0016346 male meiotic chromosome movement towards spindle pole ! CURRENT : chromosome movement towards spindle pole that OBO_REL:part_of male meiosis [cdef(GO:0051305, [OBO_REL:part_of=GO:0007140])] ! parse: GO:0016348 using "imaginal disc-derived leg joint morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00004645, OBO_REL:unfolds_in=cdef(FBbt:00001761, [OBO_REL:derives_from=FBbt:00004640])]) [-4] ! parse: GO:0016348 using "imaginal disc-derived leg joint morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00004645, OBO_REL:unfolds_in=cdef(FBbt:00001761, [OBO_REL:derives_from=MA:0000047])]) [-4] ! parse: GO:0016348 using "imaginal disc-derived leg joint morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000319, OBO_REL:unfolds_in=cdef(FBbt:00001761, [OBO_REL:derives_from=FBbt:00004640])]) [-4] ! parse: GO:0016348 using "imaginal disc-derived leg joint morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000319, OBO_REL:unfolds_in=cdef(FBbt:00001761, [OBO_REL:derives_from=MA:0000047])]) [-4] ! parse: GO:0016348 using "imaginal disc-derived leg joint morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(- derived leg joint, anatomy), OBO_REL:unfolds_in=FBbt:00001761]) [-21] ! parse: GO:0016348 using "imaginal disc-derived leg joint morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=cdef(FBbt:00001761, [OBO_REL:derives_from=cdef(FBbt:00004645, [OBO_REL:part_of=FBbt:00004640])])]) [-4] ! parse: GO:0016348 using "imaginal disc-derived leg joint morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=cdef(FBbt:00001761, [OBO_REL:derives_from=cdef(FBbt:00004645, [OBO_REL:part_of=MA:0000047])])]) [-4] ! parse: GO:0016348 using "imaginal disc-derived leg joint morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=cdef(FBbt:00001761, [OBO_REL:derives_from=cdef(MA:0000319, [OBO_REL:part_of=FBbt:00004640])])]) [-4] ! parse: GO:0016348 using "imaginal disc-derived leg joint morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=cdef(FBbt:00001761, [OBO_REL:derives_from=cdef(MA:0000319, [OBO_REL:part_of=MA:0000047])])]) [-4] ! parse: GO:0016348 using "imaginal disc-derived leg joint morphogenesis" => cdef(GO:0035111, [OBO_REL:results_in_developmental_progression_of=anon(- derived, anatomy), OBO_REL:unfolds_in=FBbt:00001761]) [-11] ! no existing xp def ! def: "The process by which the anatomical structures of an imaginal disc-derived leg joint are generated and organized. Morphogenesis pertains to the creation of form. The leg joint is a flexible region that separates the rigid sections of a leg to allow movement in a controlled manner." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of cdef(FBbt:00001761, [OBO_REL:derives_from=cdef(MA:0000319, [OBO_REL:part_of=MA:0000047])]) [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=cdef(FBbt:00001761, [OBO_REL:derives_from=cdef(MA:0000319, [OBO_REL:part_of=MA:0000047])])])] [Term] id: GO:0016348 ! imaginal disc-derived leg joint morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of imaginal_disc_-_derived_leg_joint synonym: "imaginal disc-derived joint of leg morphogenesis" EXACT [OBOL:automatic] synonym: "imaginal disc-derived joint of the leg morphogenesis" EXACT [OBOL:automatic] synonym: "imaginal disk-derived joint of leg morphogenesis" EXACT [OBOL:automatic] synonym: "imaginal disk-derived joint of the leg morphogenesis" EXACT [OBOL:automatic] synonym: "imaginal disk-derived leg joint morphogenesis" EXACT [OBOL:automatic] ! seconds spent parsing GO:0016348: 41.93 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0016358 using "dendrite development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00005110]) [-2] ! parse: GO:0016358 using "dendrite development" => cdef(GO:0032502, [results_in_complete_developmental_of=GO:0030425]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure. A dendrite is a freely branching protoplasmic process of a nerve cell." ! PROPOSED: developmental process that results_in_complete_developmental_of dendrite [cdef(GO:0032502, [results_in_complete_developmental_of=GO:0030425])] [Term] id: GO:0016358 ! dendrite development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of GO:0030425 ! dendrite ! seconds spent parsing GO:0016358: 6.17 ! No parse for: GO:0016360 sensory organ precursor cell fate determination ! No parse for: GO:0016444 somatic cell DNA recombination ! No parse for: GO:0016445 somatic diversification of immunoglobulins ! No parse for: GO:0016446 somatic hypermutation of immunoglobulin genes ! No parse for: GO:0016447 somatic recombination of immunoglobulin gene segments ! No parse for: GO:0016457 dosage compensation complex assembly during dosage compensation by hyperactivation of X chromosome ! No parse for: GO:0016477 cell migration ! No parse for: GO:0016482 cytoplasmic transport ! No parse for: GO:0016486 peptide hormone processing ! No parse for: GO:0016539 intein-mediated protein splicing ! No parse for: GO:0016549 tRNA editing ! parse: GO:0016557 using "peroxisome membrane biogenesis" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0016020, OBO_REL:unfolds_in=GO:0005777]) [-3] ! parse: GO:0016557 using "peroxisome membrane biogenesis" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=cdef(GO:0016020, [OBO_REL:part_of=GO:0005777])]) [-3] ! no existing xp def ! def: "The assembly and arrangement of the membrane of a peroxisome." ! PROPOSED: cellular component assembly that OBO_REL:results_in_creation_of cdef(GO:0016020, [OBO_REL:part_of=GO:0005777]) [cdef(GO:0022607, [OBO_REL:results_in_creation_of=cdef(GO:0016020, [OBO_REL:part_of=GO:0005777])])] [Term] id: GO:0016557 ! peroxisome membrane biogenesis intersection_of: GO:0022607 ! cellular component assembly intersection_of: OBO_REL:results_in_creation_of peroxisomal_fatty_acyl_transporter_membrane synonym: "assembly and maintenance of peroxisomal fatty acyl transporter membrane" EXACT [OBOL:automatic] synonym: "assembly and maintenance of peroxisomal membrane transporter membrane" EXACT [OBOL:automatic] synonym: "assembly and maintenance of peroxisome membrane" EXACT [OBOL:automatic] synonym: "assembly and maintenance of peroxisome receptor membrane" EXACT [OBOL:automatic] synonym: "assembly of peroxisomal fatty acyl transporter membrane" EXACT [OBOL:automatic] synonym: "assembly of peroxisomal membrane transporter membrane" EXACT [OBOL:automatic] synonym: "assembly of peroxisome membrane" EXACT [OBOL:automatic] synonym: "assembly of peroxisome receptor membrane" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of peroxisomal fatty acyl transporter membrane" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of peroxisomal membrane transporter membrane" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of peroxisome membrane" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of peroxisome receptor membrane" EXACT [OBOL:automatic] synonym: "biogenesis of peroxisomal fatty acyl transporter membrane" EXACT [OBOL:automatic] synonym: "biogenesis of peroxisomal membrane transporter membrane" EXACT [OBOL:automatic] synonym: "biogenesis of peroxisome membrane" EXACT [OBOL:automatic] synonym: "biogenesis of peroxisome receptor membrane" EXACT [OBOL:automatic] synonym: "cell structure assembly of peroxisomal fatty acyl transporter membrane" EXACT [OBOL:automatic] synonym: "cell structure assembly of peroxisomal membrane transporter membrane" EXACT [OBOL:automatic] synonym: "cell structure assembly of peroxisome membrane" EXACT [OBOL:automatic] synonym: "cell structure assembly of peroxisome receptor membrane" EXACT [OBOL:automatic] synonym: "cellular component assembly of peroxisomal fatty acyl transporter membrane" EXACT [OBOL:automatic] synonym: "cellular component assembly of peroxisomal membrane transporter membrane" EXACT [OBOL:automatic] synonym: "cellular component assembly of peroxisome membrane" EXACT [OBOL:automatic] synonym: "cellular component assembly of peroxisome receptor membrane" EXACT [OBOL:automatic] synonym: "complex assembly of peroxisomal fatty acyl transporter membrane" EXACT [OBOL:automatic] synonym: "complex assembly of peroxisomal membrane transporter membrane" EXACT [OBOL:automatic] synonym: "complex assembly of peroxisome membrane" EXACT [OBOL:automatic] synonym: "complex assembly of peroxisome receptor membrane" EXACT [OBOL:automatic] synonym: "formation of peroxisomal fatty acyl transporter membrane" EXACT [OBOL:automatic] synonym: "formation of peroxisomal membrane transporter membrane" EXACT [OBOL:automatic] synonym: "formation of peroxisome membrane" EXACT [OBOL:automatic] synonym: "formation of peroxisome receptor membrane" EXACT [OBOL:automatic] synonym: "peroxisomal fatty acyl transporter membrane assembly" EXACT [OBOL:automatic] synonym: "peroxisomal fatty acyl transporter membrane assembly and maintenance" EXACT [OBOL:automatic] synonym: "peroxisomal fatty acyl transporter membrane biogenesis" EXACT [OBOL:automatic] synonym: "peroxisomal fatty acyl transporter membrane biogenesis and assembly" EXACT [OBOL:automatic] synonym: "peroxisomal fatty acyl transporter membrane cell structure assembly" EXACT [OBOL:automatic] synonym: "peroxisomal fatty acyl transporter membrane cellular component assembly" EXACT [OBOL:automatic] synonym: "peroxisomal fatty acyl transporter membrane complex assembly" EXACT [OBOL:automatic] synonym: "peroxisomal fatty acyl transporter membrane formation" EXACT [OBOL:automatic] synonym: "peroxisomal membrane transporter membrane assembly" EXACT [OBOL:automatic] synonym: "peroxisomal membrane transporter membrane assembly and maintenance" EXACT [OBOL:automatic] synonym: "peroxisomal membrane transporter membrane biogenesis" EXACT [OBOL:automatic] synonym: "peroxisomal membrane transporter membrane biogenesis and assembly" EXACT [OBOL:automatic] synonym: "peroxisomal membrane transporter membrane cell structure assembly" EXACT [OBOL:automatic] synonym: "peroxisomal membrane transporter membrane cellular component assembly" EXACT [OBOL:automatic] synonym: "peroxisomal membrane transporter membrane complex assembly" EXACT [OBOL:automatic] synonym: "peroxisomal membrane transporter membrane formation" EXACT [OBOL:automatic] synonym: "peroxisome membrane assembly" EXACT [OBOL:automatic] synonym: "peroxisome membrane assembly and maintenance" EXACT [OBOL:automatic] synonym: "peroxisome membrane biogenesis and assembly" EXACT [OBOL:automatic] synonym: "peroxisome membrane cell structure assembly" EXACT [OBOL:automatic] synonym: "peroxisome membrane cellular component assembly" EXACT [OBOL:automatic] synonym: "peroxisome membrane complex assembly" EXACT [OBOL:automatic] synonym: "peroxisome membrane formation" EXACT [OBOL:automatic] synonym: "peroxisome receptor membrane assembly" EXACT [OBOL:automatic] synonym: "peroxisome receptor membrane assembly and maintenance" EXACT [OBOL:automatic] synonym: "peroxisome receptor membrane biogenesis" EXACT [OBOL:automatic] synonym: "peroxisome receptor membrane biogenesis and assembly" EXACT [OBOL:automatic] synonym: "peroxisome receptor membrane cell structure assembly" EXACT [OBOL:automatic] synonym: "peroxisome receptor membrane cellular component assembly" EXACT [OBOL:automatic] synonym: "peroxisome receptor membrane complex assembly" EXACT [OBOL:automatic] synonym: "peroxisome receptor membrane formation" EXACT [OBOL:automatic] def: "The aggregation and bonding together of a set of macromolecules to form a peroxisomal fatty acyl transporter membrane" [OBOL:automatic] ! seconds spent parsing GO:0016557: 12.86 ! No parse for: GO:0016558 protein import into peroxisome matrix ! parse: GO:0016559 using "peroxisome fission" => cdef(GO:0009987, [OBO_REL:results_in_division_of=GO:0005777]) [-2] ! no existing xp def ! def: "The division of a mature peroxisome within a cell to form two or more separate peroxisome compartments." ! PROPOSED: cellular process that OBO_REL:results_in_division_of peroxisome [cdef(GO:0009987, [OBO_REL:results_in_division_of=GO:0005777])] [Term] id: GO:0016559 ! peroxisome fission intersection_of: GO:0009987 ! cellular process intersection_of: OBO_REL:results_in_division_of GO:0005777 ! peroxisome synonym: "peroxisomal fatty acyl transporter fission" EXACT [OBOL:automatic] synonym: "peroxisomal fission" EXACT [OBOL:automatic] synonym: "peroxisomal membrane transporter fission" EXACT [OBOL:automatic] synonym: "peroxisome receptor fission" EXACT [OBOL:automatic] def: "The creation of two or more GO:0005777 s by division of one GO:0005777" [OBOL:automatic] ! seconds spent parsing GO:0016559: 17.04 ! No parse for: GO:0016560 protein import into peroxisome matrix, docking ! No parse for: GO:0016561 protein import into peroxisome matrix, translocation ! Already have xp for: GO:0016562 protein import into peroxisome matrix, receptor recycling ! CURRENT : receptor recycling that OBO_REL:part_of protein import into peroxisome matrix [cdef(GO:0001881, [OBO_REL:part_of=GO:0016558])] ! No parse for: GO:0016568 chromatin modification ! No parse for: GO:0016584 nucleosome spacing ! Already have xp for: GO:0016973 poly(A)+ mRNA export from nucleus ! CURRENT : mRNA export from nucleus that OBO_REL:results_in_transport_of poly (A) [cdef(GO:0006406, [OBO_REL:results_in_transport_of=cell:poly_(_A_)])] ! No parse for: GO:0016998 cell wall catabolic process ! No parse for: GO:0017004 cytochrome complex assembly ! parse: GO:0017062 using "complex III assembly" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0032842]) [-2] ! parse: GO:0017062 using "complex III biogenesis" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0032842]) [-2] ! parse: GO:0017062 using "cytochrome bc(1) complex assembly" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0032842]) [-2] ! parse: GO:0017062 using "cytochrome bc(1) complex biogenesis" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0032842]) [-2] ! no existing xp def ! def: "The aggregation and bonding together of a set of components to form the cytochrome bc(1) complex, a transmembrane lipoprotein complex that it catalyzes the reduction of cytochrome c by accepting reducing equivalents from Coenzyme Q, by the aggregation and bonding together of its constituents." ! PROPOSED: cellular component assembly that OBO_REL:results_in_creation_of cytochrome bc(1) complex [cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0032842])] [Term] id: GO:0017062 ! cytochrome bc(1) complex assembly intersection_of: GO:0022607 ! cellular component assembly intersection_of: OBO_REL:results_in_creation_of GO:0032842 ! cytochrome bc(1) complex synonym: "assembly and maintenance of complex III" EXACT [OBOL:automatic] synonym: "assembly and maintenance of cytochrome bc (1) complex" EXACT [OBOL:automatic] synonym: "assembly and maintenance of cytochrome bc 1 complex" EXACT [OBOL:automatic] synonym: "assembly of complex III" EXACT [OBOL:automatic] synonym: "assembly of cytochrome bc (1) complex" EXACT [OBOL:automatic] synonym: "assembly of cytochrome bc 1 complex" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of complex III" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of cytochrome bc (1) complex" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of cytochrome bc 1 complex" EXACT [OBOL:automatic] synonym: "biogenesis of complex III" EXACT [OBOL:automatic] synonym: "biogenesis of cytochrome bc (1) complex" EXACT [OBOL:automatic] synonym: "biogenesis of cytochrome bc 1 complex" EXACT [OBOL:automatic] synonym: "cell structure assembly of complex III" EXACT [OBOL:automatic] synonym: "cell structure assembly of cytochrome bc (1) complex" EXACT [OBOL:automatic] synonym: "cell structure assembly of cytochrome bc 1 complex" EXACT [OBOL:automatic] synonym: "cellular component assembly of complex III" EXACT [OBOL:automatic] synonym: "cellular component assembly of cytochrome bc (1) complex" EXACT [OBOL:automatic] synonym: "cellular component assembly of cytochrome bc 1 complex" EXACT [OBOL:automatic] synonym: "complex III assembly and maintenance" EXACT [OBOL:automatic] synonym: "complex III biogenesis and assembly" EXACT [OBOL:automatic] synonym: "complex III cell structure assembly" EXACT [OBOL:automatic] synonym: "complex III cellular component assembly" EXACT [OBOL:automatic] synonym: "complex III complex assembly" EXACT [OBOL:automatic] synonym: "complex III formation" EXACT [OBOL:automatic] synonym: "complex assembly of complex III" EXACT [OBOL:automatic] synonym: "complex assembly of cytochrome bc (1) complex" EXACT [OBOL:automatic] synonym: "complex assembly of cytochrome bc 1 complex" EXACT [OBOL:automatic] synonym: "cytochrome bc (1) complex assembly" EXACT [OBOL:automatic] synonym: "cytochrome bc (1) complex assembly and maintenance" EXACT [OBOL:automatic] synonym: "cytochrome bc (1) complex biogenesis" EXACT [OBOL:automatic] synonym: "cytochrome bc (1) complex biogenesis and assembly" EXACT [OBOL:automatic] synonym: "cytochrome bc (1) complex cell structure assembly" EXACT [OBOL:automatic] synonym: "cytochrome bc (1) complex cellular component assembly" EXACT [OBOL:automatic] synonym: "cytochrome bc (1) complex complex assembly" EXACT [OBOL:automatic] synonym: "cytochrome bc (1) complex formation" EXACT [OBOL:automatic] synonym: "cytochrome bc 1 complex assembly" EXACT [OBOL:automatic] synonym: "cytochrome bc 1 complex assembly and maintenance" EXACT [OBOL:automatic] synonym: "cytochrome bc 1 complex biogenesis" EXACT [OBOL:automatic] synonym: "cytochrome bc 1 complex biogenesis and assembly" EXACT [OBOL:automatic] synonym: "cytochrome bc 1 complex cell structure assembly" EXACT [OBOL:automatic] synonym: "cytochrome bc 1 complex cellular component assembly" EXACT [OBOL:automatic] synonym: "cytochrome bc 1 complex complex assembly" EXACT [OBOL:automatic] synonym: "cytochrome bc 1 complex formation" EXACT [OBOL:automatic] synonym: "formation of complex III" EXACT [OBOL:automatic] synonym: "formation of cytochrome bc (1) complex" EXACT [OBOL:automatic] synonym: "formation of cytochrome bc 1 complex" EXACT [OBOL:automatic] def: "The aggregation and bonding together of a set of macromolecules to form a complex III" [OBOL:automatic] ! seconds spent parsing GO:0017062: 35.43 ! parse: GO:0017126 using "nucleolus biogenesis" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0005730]) [-2] ! no existing xp def ! def: "Processes involved with the formation and assembly of the nucleolus, a small, dense body one or more of which are present in the nucleus of eukaryotic cells." ! PROPOSED: cellular component assembly that OBO_REL:results_in_creation_of nucleolus [cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0005730])] [Term] id: GO:0017126 ! nucleologenesis intersection_of: GO:0022607 ! cellular component assembly intersection_of: OBO_REL:results_in_creation_of GO:0005730 ! nucleolus synonym: "assembly and maintenance of nucleolus" EXACT [OBOL:automatic] synonym: "assembly of nucleolus" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of nucleolus" EXACT [OBOL:automatic] synonym: "biogenesis of nucleolus" EXACT [OBOL:automatic] synonym: "cell structure assembly of nucleolus" EXACT [OBOL:automatic] synonym: "cellular component assembly of nucleolus" EXACT [OBOL:automatic] synonym: "complex assembly of nucleolus" EXACT [OBOL:automatic] synonym: "formation of nucleolus" EXACT [OBOL:automatic] synonym: "nucleolus assembly" EXACT [OBOL:automatic] synonym: "nucleolus assembly and maintenance" EXACT [OBOL:automatic] synonym: "nucleolus biogenesis and assembly" EXACT [OBOL:automatic] synonym: "nucleolus cell structure assembly" EXACT [OBOL:automatic] synonym: "nucleolus cellular component assembly" EXACT [OBOL:automatic] synonym: "nucleolus complex assembly" EXACT [OBOL:automatic] synonym: "nucleolus formation" EXACT [OBOL:automatic] def: "The aggregation and bonding together of a set of macromolecules to form a nucleolus" [OBOL:automatic] ! seconds spent parsing GO:0017126: 9.56 ! Already have xp for: GO:0017145 stem cell division ! CURRENT : cell division that OBO_REL:results_in_division_of stem cell [cdef(GO:0051301, [OBO_REL:results_in_division_of=CL:0000034])] ! No parse for: GO:0018063 cytochrome c-heme linkage ! No parse for: GO:0018104 peptidoglycan-protein cross-linking ! No parse for: GO:0018185 poly-N-methyl-propylamination ! No parse for: GO:0018192 enzyme active site formation via L-cysteine persulfide ! No parse for: GO:0018248 enzyme active site formation via S-sulfo-L-cysteine ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0018307 using "enzyme active site formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(enzyme active site, anatomy)]) [-19] ! no existing xp def ! def: "The modification of part of an enzyme to form the active site." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of anon(enzyme active site, anatomy) [cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(enzyme active site, anatomy)])] [Term] id: GO:0018307 ! enzyme active site formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of anatomy:enzyme_active_site synonym: "enzyme active site anatomical structure formation" EXACT [OBOL:automatic] synonym: "enzyme active site formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0018307: 4.36 ! No parse for: GO:0018320 enzyme active site formation via S-methyl-L-cysteine ! No parse for: GO:0018323 enzyme active site formation via L-cysteine sulfinic acid ! No parse for: GO:0018324 enzyme active site formation via L-cysteine sulfenic acid ! No parse for: GO:0018325 enzyme active site formation via S-phospho-L-cysteine ! No parse for: GO:0018326 enzyme active site formation via S-acetyl-L-cysteine ! No parse for: GO:0018327 enzyme active site formation via 1'-phospho-L-histidine ! No parse for: GO:0018328 enzyme active site formation via 3'-phospho-L-histidine ! No parse for: GO:0018329 enzyme active site formation via N6-(phospho-5'-adenosine)-L-lysine ! No parse for: GO:0018330 enzyme active site formation via N6-(phospho-5'-guanosine)-L-lysine ! No parse for: GO:0018331 enzyme active site formation via O-phospho-L-serine ! No parse for: GO:0018332 enzyme active site formation via O-(phospho-5'-adenosine)-L-threonine ! No parse for: GO:0018333 enzyme active site formation via O-phospho-L-threonine ! No parse for: GO:0018334 enzyme active site formation via O4'-phospho-L-tyrosine ! No parse for: GO:0018378 cytochrome c-heme linkage via heme-L-cysteine ! No parse for: GO:0018379 cytochrome c-heme linkage via heme-bis-L-cysteine ! No parse for: GO:0018443 enzyme active site formation via L-aspartic 4-phosphoric anhydride ! No parse for: GO:0018904 organic ether metabolic process ! No parse for: GO:0018908 organosulfide cycle ! No parse for: GO:0018941 organomercury metabolic process ! No parse for: GO:0018942 organometal metabolic process ! No parse for: GO:0018943 organotin metabolic process ! No parse for: GO:0018945 organosilicon metabolic process ! parse: GO:0018992 using "germ-line sex determination" => cdef(GO:0007530, [OBO_REL:results_in_developmental_progression_of=cell:germ_-_line]) [-2] ! no existing xp def ! def: "The determination of sex and sexual phenotype in an organism's germ line." ! PROPOSED: sex determination that OBO_REL:results_in_developmental_progression_of germ-line [cdef(GO:0007530, [OBO_REL:results_in_developmental_progression_of=cell:germ_-_line])] [Term] id: GO:0018992 ! germ-line sex determination intersection_of: GO:0007530 ! sex determination intersection_of: OBO_REL:results_in_developmental_progression_of cell:germ_-_line ! germ-line ! seconds spent parsing GO:0018992: 9.73 ! parse: GO:0018993 using "somatic sex determination" => cdef(GO:0007530, [OBO_REL:results_in_developmental_progression_of=anon(somatic, anatomy)]) [-8] ! no existing xp def ! def: "The determination of sex and sexual phenotypes in an organism's soma." ! PROPOSED: sex determination that OBO_REL:results_in_developmental_progression_of anon(somatic, anatomy) [cdef(GO:0007530, [OBO_REL:results_in_developmental_progression_of=anon(somatic, anatomy)])] [Term] id: GO:0018993 ! somatic sex determination intersection_of: GO:0007530 ! sex determination intersection_of: OBO_REL:results_in_developmental_progression_of anatomy:somatic ! seconds spent parsing GO:0018993: 4.19 ! No parse for: GO:0019047 provirus integration ! No parse for: GO:0019057 modification by virus of host cell mRNA translation ! No parse for: GO:0019060 intracellular transport of viral proteins in host cell ! No parse for: GO:0019062 virion attachment to host cell surface receptor ! No parse for: GO:0019063 virion penetration into host cell ! No parse for: GO:0019064 viral envelope fusion with host membrane ! parse: GO:0019069 using "viral capsid assembly" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0019028]) [-2] ! no existing xp def ! def: "The assembly of a virus capsid from its protein subunits." ! PROPOSED: cellular component assembly that OBO_REL:results_in_creation_of viral capsid [cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0019028])] [Term] id: GO:0019069 ! viral capsid assembly intersection_of: GO:0022607 ! cellular component assembly intersection_of: OBO_REL:results_in_creation_of GO:0019028 ! viral capsid synonym: "assembly and maintenance of viral capsid" EXACT [OBOL:automatic] synonym: "assembly and maintenance of viral capsid (sensu Retroviridae)" EXACT [OBOL:automatic] synonym: "assembly of viral capsid" EXACT [OBOL:automatic] synonym: "assembly of viral capsid (sensu Retroviridae)" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of viral capsid" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of viral capsid (sensu Retroviridae)" EXACT [OBOL:automatic] synonym: "biogenesis of viral capsid" EXACT [OBOL:automatic] synonym: "biogenesis of viral capsid (sensu Retroviridae)" EXACT [OBOL:automatic] synonym: "cell structure assembly of viral capsid" EXACT [OBOL:automatic] synonym: "cell structure assembly of viral capsid (sensu Retroviridae)" EXACT [OBOL:automatic] synonym: "cellular component assembly of viral capsid" EXACT [OBOL:automatic] synonym: "cellular component assembly of viral capsid (sensu Retroviridae)" EXACT [OBOL:automatic] synonym: "complex assembly of viral capsid" EXACT [OBOL:automatic] synonym: "complex assembly of viral capsid (sensu Retroviridae)" EXACT [OBOL:automatic] synonym: "formation of viral capsid" EXACT [OBOL:automatic] synonym: "formation of viral capsid (sensu Retroviridae)" EXACT [OBOL:automatic] synonym: "viral capsid (sensu Retroviridae) assembly" EXACT [OBOL:automatic] synonym: "viral capsid (sensu Retroviridae) assembly and maintenance" EXACT [OBOL:automatic] synonym: "viral capsid (sensu Retroviridae) biogenesis" EXACT [OBOL:automatic] synonym: "viral capsid (sensu Retroviridae) biogenesis and assembly" EXACT [OBOL:automatic] synonym: "viral capsid (sensu Retroviridae) cell structure assembly" EXACT [OBOL:automatic] synonym: "viral capsid (sensu Retroviridae) cellular component assembly" EXACT [OBOL:automatic] synonym: "viral capsid (sensu Retroviridae) complex assembly" EXACT [OBOL:automatic] synonym: "viral capsid (sensu Retroviridae) formation" EXACT [OBOL:automatic] synonym: "viral capsid assembly and maintenance" EXACT [OBOL:automatic] synonym: "viral capsid biogenesis" EXACT [OBOL:automatic] synonym: "viral capsid biogenesis and assembly" EXACT [OBOL:automatic] synonym: "viral capsid cell structure assembly" EXACT [OBOL:automatic] synonym: "viral capsid cellular component assembly" EXACT [OBOL:automatic] synonym: "viral capsid complex assembly" EXACT [OBOL:automatic] synonym: "viral capsid formation" EXACT [OBOL:automatic] def: "The aggregation and bonding together of a set of macromolecules to form a viral capsid" [OBOL:automatic] ! seconds spent parsing GO:0019069: 5.57 ! parse: GO:0019070 using "viral genome maturation" => cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=GO:0019015]) [-2] ! no existing xp def ! def: "Viral processes that occur on newly synthesized viral genomes." ! PROPOSED: developmental maturation that OBO_REL:results_in_developmental_progression_of viral genome [cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=GO:0019015])] [Term] id: GO:0019070 ! viral genome maturation intersection_of: GO:0021700 ! developmental maturation intersection_of: OBO_REL:results_in_developmental_progression_of GO:0019015 ! viral genome synonym: "viral genome developmental maturation" EXACT [OBOL:automatic] ! seconds spent parsing GO:0019070: 5.54 ! No parse for: GO:0019072 viral genome packaging ! No parse for: GO:0019079 viral genome replication ! No parse for: GO:0019080 viral genome expression ! Already have xp for: GO:0019094 pole plasm mRNA localization ! CURRENT : localization that OBO_REL:results_in_localization_of pole plasm mRNA [cdef(GO:0051179, [OBO_REL:results_in_localization_of=cell:pole_plasm_mRNA])] ! Already have xp for: GO:0019095 pole plasm mitochondrial rRNA localization ! CURRENT : localization that OBO_REL:results_in_localization_of pole plasm mitochondrial rRNA [cdef(GO:0051179, [OBO_REL:results_in_localization_of=cell:pole_plasm_mitochondrial_rRNA])] ! Already have xp for: GO:0019096 pole plasm mitochondrial lrRNA localization ! CURRENT : localization that OBO_REL:results_in_localization_of pole plasm mitochondrial lrRNA [cdef(GO:0051179, [OBO_REL:results_in_localization_of=cell:pole_plasm_mitochondrial_lrRNA])] ! Already have xp for: GO:0019097 pole plasm mitochondrial srRNA localization ! CURRENT : localization that OBO_REL:results_in_localization_of pole plasm mitochondrial srRNA [cdef(GO:0051179, [OBO_REL:results_in_localization_of=cell:pole_plasm_mitochondrial_srRNA])] ! No parse for: GO:0019121 peptidoglycan-protein cross-linking via N6-mureinyl-L-lysine ! No parse for: GO:0019378 sulfate assimilation, phosphoadenylyl sulfate reduction by an oxidoreductase, acting on sulfur group of donors, NAD or NADP as acceptor ! No parse for: GO:0019379 sulfate assimilation, phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin) ! No parse for: GO:0019533 cellobiose transport ! No parse for: GO:0019613 bile acid 7alpha-dehydroxylation pathway ! No parse for: GO:0019637 organophosphate metabolic process ! Already have xp for: GO:0019724 B cell mediated immunity ! CURRENT : immune system process that OBO_REL:mediated_by B cell [cdef(GO:0002376, [OBO_REL:mediated_by=CL:0000236])] ! No parse for: GO:0019725 cell homeostasis ! Already have xp for: GO:0019749 cytoskeleton-dependent cytoplasmic transport, nurse cell to oocyte ! CURRENT : cytoplasmic transport, nurse cell to oocyte that OBO_REL:dependent_on cytoskeleton [cdef(GO:0007303, [OBO_REL:dependent_on=GO:0005856])] ! parse: GO:0019750 using "chloroplast transport" => cdef(GO:0006810, [OBO_REL:results_in_transport_of=GO:0009507]) [-2] ! no existing xp def ! def: "The directed movement of a chloroplast, a chlorophyll containing plastid found in cells of algae and higher plants, into, out of, within or between cells." ! PROPOSED: transport that OBO_REL:results_in_transport_of chloroplast [cdef(GO:0006810, [OBO_REL:results_in_transport_of=GO:0009507])] [Term] id: GO:0019750 ! chloroplast transport intersection_of: GO:0006810 ! transport intersection_of: OBO_REL:results_in_transport_of GO:0009507 ! chloroplast ! seconds spent parsing GO:0019750: 6.04 ! No parse for: GO:0019817 vesicle fusion with peroxisome ! No parse for: GO:0019827 stem cell maintenance ! No parse for: GO:0019896 axon transport of mitochondrion ! parse: GO:0019991 using "septate junction assembly" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0005918]) [-2] ! no existing xp def ! def: "The assembly of a septate junction, an intercellular junction found in invertebrate epithelia that is characterized by a ladder like appearance in electron micrographs and thought to provide structural strength and to provide a barrier to diffusion of solutes through the intercellular space." ! PROPOSED: cellular component assembly that OBO_REL:results_in_creation_of septate junction [cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0005918])] [Term] id: GO:0019991 ! septate junction assembly intersection_of: GO:0022607 ! cellular component assembly intersection_of: OBO_REL:results_in_creation_of GO:0005918 ! septate junction synonym: "assembly and maintenance of septate desmosome" EXACT [OBOL:automatic] synonym: "assembly and maintenance of septate junction" EXACT [OBOL:automatic] synonym: "assembly of septate desmosome" EXACT [OBOL:automatic] synonym: "assembly of septate junction" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of septate desmosome" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of septate junction" EXACT [OBOL:automatic] synonym: "biogenesis of septate desmosome" EXACT [OBOL:automatic] synonym: "biogenesis of septate junction" EXACT [OBOL:automatic] synonym: "cell structure assembly of septate desmosome" EXACT [OBOL:automatic] synonym: "cell structure assembly of septate junction" EXACT [OBOL:automatic] synonym: "cellular component assembly of septate desmosome" EXACT [OBOL:automatic] synonym: "cellular component assembly of septate junction" EXACT [OBOL:automatic] synonym: "complex assembly of septate desmosome" EXACT [OBOL:automatic] synonym: "complex assembly of septate junction" EXACT [OBOL:automatic] synonym: "formation of septate desmosome" EXACT [OBOL:automatic] synonym: "formation of septate junction" EXACT [OBOL:automatic] synonym: "septate desmosome assembly" EXACT [OBOL:automatic] synonym: "septate desmosome assembly and maintenance" EXACT [OBOL:automatic] synonym: "septate desmosome biogenesis" EXACT [OBOL:automatic] synonym: "septate desmosome biogenesis and assembly" EXACT [OBOL:automatic] synonym: "septate desmosome cell structure assembly" EXACT [OBOL:automatic] synonym: "septate desmosome cellular component assembly" EXACT [OBOL:automatic] synonym: "septate desmosome complex assembly" EXACT [OBOL:automatic] synonym: "septate desmosome formation" EXACT [OBOL:automatic] synonym: "septate junction assembly and maintenance" EXACT [OBOL:automatic] synonym: "septate junction biogenesis" EXACT [OBOL:automatic] synonym: "septate junction biogenesis and assembly" EXACT [OBOL:automatic] synonym: "septate junction cell structure assembly" EXACT [OBOL:automatic] synonym: "septate junction cellular component assembly" EXACT [OBOL:automatic] synonym: "septate junction complex assembly" EXACT [OBOL:automatic] synonym: "septate junction formation" EXACT [OBOL:automatic] def: "The aggregation and bonding together of a set of macromolecules to form a septate desmosome" [OBOL:automatic] ! seconds spent parsing GO:0019991: 5.58 ! No parse for: GO:0020021 immortalization of host cell ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0021501 using "prechordal plate formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=ZFA:0000060]) [-2] ! parse: GO:0021501 using "prechordal plate formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0000060]) [-2] ! no existing xp def ! def: "The formation of the prechordal plate. The prechordal plate is a thickening of the endoderm at the cranial end of the primitive streak formed by the involution of Spemann's organizer cells. The prechordal plate and the notochord induce the formation of the neural plate from the overlying ectodermal cells." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of prechordal plate [cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0000060])] [Term] id: GO:0021501 ! prechordal plate formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of ZFA:0000060 ! prechordal plate ! seconds spent parsing GO:0021501: 5.21 ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0021508 using "floor plate formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=ZFA:0000022]) [-2] ! parse: GO:0021508 using "floor plate formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0000022]) [-2] ! no existing xp def ! def: "The formation of a ventral region of glial cells in the neural tube that provides inductive signals for the specification of neuronal cell types. The floor plate is evident at the ventral midline by the neural fold stage." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of floor plate [cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0000022])] [Term] id: GO:0021508 ! floor plate formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of ZFA:0000022 ! floor plate synonym: "floorplate anatomical structure formation" EXACT [OBOL:automatic] synonym: "floorplate formation" EXACT [OBOL:automatic] synonym: "floorplate formation of an anatomical structure" EXACT [OBOL:automatic] synonym: "fp anatomical structure formation" EXACT [OBOL:automatic] synonym: "fp formation" EXACT [OBOL:automatic] synonym: "fp formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021508: 5.2 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0021510 using "spinal cord development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000216]) [-2] ! parse: GO:0021510 using "spinal cord development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000075]) [-2] ! parse: GO:0021510 using "spinal cord development" => cdef(GO:0032502, [results_in_complete_developmental_of=cell:spinal_cord]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the spinal cord over time, from its formation to the mature structure. The spinal cord primarily conducts sensory and motor nerve impulses between the brain and the peripheral nervous tissues." ! PROPOSED: developmental process that results_in_complete_developmental_of spinal cord [cdef(GO:0032502, [results_in_complete_developmental_of=cell:spinal_cord])] [Term] id: GO:0021510 ! spinal cord development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of cell:spinal_cord ! spinal cord ! seconds spent parsing GO:0021510: 6.45 ! parse: GO:0021511 using "spinal cord patterning" => cdef(GO:0007389, [OBO_REL:results_in_patterning_for=MA:0000216]) [-2] ! parse: GO:0021511 using "spinal cord patterning" => cdef(GO:0007389, [OBO_REL:results_in_patterning_for=ZFA:0000075]) [-2] ! parse: GO:0021511 using "spinal cord patterning" => cdef(GO:0007389, [OBO_REL:results_in_patterning_for=cell:spinal_cord]) [-2] ! no existing xp def ! def: "The regionalization process that regulates the coordinated growth and establishes the non-random spatial arrangement of the spinal cord." ! PROPOSED: pattern specification process that OBO_REL:results_in_patterning_for spinal cord [cdef(GO:0007389, [OBO_REL:results_in_patterning_for=cell:spinal_cord])] [Term] id: GO:0021511 ! spinal cord patterning intersection_of: GO:0007389 ! pattern specification process intersection_of: OBO_REL:results_in_patterning_for cell:spinal_cord ! spinal cord ! seconds spent parsing GO:0021511: 6.45 ! No parse for: GO:0021512 spinal cord anterior-posterior patterning ! No parse for: GO:0021513 spinal cord dorsal-ventral patterning ! parse: GO:0021514 using "ventral spinal cord interneuron differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(ventral spinal cord interneuron, cell)]) [-32] ! no existing xp def ! def: "The process whereby neuroepithelial cells in the neural tube acquire specialized structural and/or functional features of ventral spinal cord interneurons. Ventral spinal cord interneurons are cells located in the ventral portion of the spinal cord that transmit signals between sensory and motor neurons and are required for reflexive responses. Differentiation includes the processes involved in commitment of a cell to a specific fate." ! PROPOSED: cell differentiation that OBO_REL:results_in_acquisition_of_features_of anon(ventral spinal cord interneuron, cell) [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(ventral spinal cord interneuron, cell)])] [Term] id: GO:0021514 ! ventral spinal cord interneuron differentiation intersection_of: GO:0030154 ! cell differentiation intersection_of: OBO_REL:results_in_acquisition_of_features_of cell:ventral_spinal_cord_interneuron synonym: "ventral spinal cord interneuron cell differentiation" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021514: 5.14 ! parse: GO:0021515 using "cell differentiation in spinal cord" => cdef(GO:0030154, [OBO_REL:unfolds_in=MA:0000216]) [-2] ! parse: GO:0021515 using "cell differentiation in spinal cord" => cdef(GO:0030154, [OBO_REL:unfolds_in=ZFA:0000075]) [-2] ! parse: GO:0021515 using "cell differentiation in spinal cord" => cdef(GO:0030154, [OBO_REL:unfolds_in=cell:spinal_cord]) [-2] ! parse: GO:0021515 using "cell differentiation in spinal cord" => cdef(cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000000]), [OBO_REL:unfolds_in=MA:0000216]) [-3] ! parse: GO:0021515 using "cell differentiation in spinal cord" => cdef(cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000000]), [OBO_REL:unfolds_in=ZFA:0000075]) [-3] ! parse: GO:0021515 using "cell differentiation in spinal cord" => cdef(cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000000]), [OBO_REL:unfolds_in=cell:spinal_cord]) [-3] ! no existing xp def ! def: "The process whereby relatively unspecialized cells acquire specialized structural and/or functional features that characterize the cells of the spinal cord. Differentiation includes the processes involved in commitment of a cell to a specific fate." ! PROPOSED: cell differentiation that OBO_REL:unfolds_in spinal cord [cdef(GO:0030154, [OBO_REL:unfolds_in=cell:spinal_cord])] [Term] id: GO:0021515 ! cell differentiation in spinal cord intersection_of: GO:0030154 ! cell differentiation intersection_of: OBO_REL:unfolds_in cell:spinal_cord ! spinal cord ! seconds spent parsing GO:0021515: 11.59 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0021517 using "ventral spinal cord development" => cdef(GO:0021510, [OBO_REL:results_in_developmental_progression_of=anon(ventral, anatomy)]) [-8] ! parse: GO:0021517 using "ventral spinal cord development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(ventral spinal cord, anatomy)]) [-20] ! no existing xp def ! def: "The process whose specific outcome is the progression of the ventral region of the spinal cord over time, from its formation to the mature structure. The neurons of the ventral region of the mature spinal cord participate in motor output." ! PROPOSED: spinal cord development that OBO_REL:results_in_developmental_progression_of anon(ventral, anatomy) [cdef(GO:0021510, [OBO_REL:results_in_developmental_progression_of=anon(ventral, anatomy)])] [Term] id: GO:0021517 ! ventral spinal cord development intersection_of: GO:0021510 ! spinal cord development intersection_of: OBO_REL:results_in_developmental_progression_of anatomy:ventral ! seconds spent parsing GO:0021517: 4.94 ! No parse for: GO:0021518 spinal cord commissural neuron specification ! No parse for: GO:0021519 spinal cord association neuron specification ! parse: GO:0021520 using "spinal cord motor neuron cell fate specification" => cdef(GO:0001708, [OBO_REL:results_in_specification_of=CL:0000000, OBO_REL:unfolds_in=cdef(FBbt:00005123, [OBO_REL:part_of=MA:0000216])]) [-4] ! parse: GO:0021520 using "spinal cord motor neuron cell fate specification" => cdef(GO:0001708, [OBO_REL:results_in_specification_of=CL:0000000, OBO_REL:unfolds_in=cdef(FBbt:00005123, [OBO_REL:part_of=ZFA:0000075])]) [-4] ! parse: GO:0021520 using "spinal cord motor neuron cell fate specification" => cdef(GO:0001708, [OBO_REL:results_in_specification_of=CL:0000000, OBO_REL:unfolds_in=cdef(ZFA:0009052, [OBO_REL:part_of=MA:0000216])]) [-4] ! parse: GO:0021520 using "spinal cord motor neuron cell fate specification" => cdef(GO:0001708, [OBO_REL:results_in_specification_of=CL:0000000, OBO_REL:unfolds_in=cdef(ZFA:0009052, [OBO_REL:part_of=ZFA:0000075])]) [-4] ! parse: GO:0021520 using "spinal cord motor neuron cell fate specification" => cdef(GO:0001708, [OBO_REL:results_in_specification_of=CL:0000100, OBO_REL:unfolds_in=MA:0000216]) [-3] ! parse: GO:0021520 using "spinal cord motor neuron cell fate specification" => cdef(GO:0001708, [OBO_REL:results_in_specification_of=CL:0000100, OBO_REL:unfolds_in=ZFA:0000075]) [-3] ! parse: GO:0021520 using "spinal cord motor neuron cell fate specification" => cdef(GO:0001708, [OBO_REL:results_in_specification_of=CL:0000100, OBO_REL:unfolds_in=cell:spinal_cord]) [-3] ! parse: GO:0021520 using "spinal cord motor neuron cell fate specification" => cdef(GO:0001708, [and=results_in_specification_of(CL:0000000)/unfolds_in(CL:0000100), OBO_REL:unfolds_in=MA:0000216]) [-3] ! parse: GO:0021520 using "spinal cord motor neuron cell fate specification" => cdef(GO:0001708, [and=results_in_specification_of(CL:0000000)/unfolds_in(CL:0000100), OBO_REL:unfolds_in=ZFA:0000075]) [-3] ! parse: GO:0021520 using "spinal cord motor neuron cell fate specification" => cdef(GO:0001708, [and=results_in_specification_of(CL:0000000)/unfolds_in(CL:0000100), OBO_REL:unfolds_in=cell:spinal_cord]) [-3] ! parse: GO:0021520 using "spinal cord motor neuron cell fate specification" => cdef(GO:0001708, [and=results_in_specification_of(CL:0000000)/unfolds_in(FBbt:00005123), OBO_REL:unfolds_in=MA:0000216]) [-3] ! parse: GO:0021520 using "spinal cord motor neuron cell fate specification" => cdef(GO:0001708, [and=results_in_specification_of(CL:0000000)/unfolds_in(FBbt:00005123), OBO_REL:unfolds_in=ZFA:0000075]) [-3] ! parse: GO:0021520 using "spinal cord motor neuron cell fate specification" => cdef(GO:0001708, [and=results_in_specification_of(CL:0000000)/unfolds_in(FBbt:00005123), OBO_REL:unfolds_in=cell:spinal_cord]) [-3] ! parse: GO:0021520 using "spinal cord motor neuron cell fate specification" => cdef(GO:0001708, [and=results_in_specification_of(CL:0000000)/unfolds_in(ZFA:0009052), OBO_REL:unfolds_in=MA:0000216]) [-3] ! parse: GO:0021520 using "spinal cord motor neuron cell fate specification" => cdef(GO:0001708, [and=results_in_specification_of(CL:0000000)/unfolds_in(ZFA:0009052), OBO_REL:unfolds_in=ZFA:0000075]) [-3] ! parse: GO:0021520 using "spinal cord motor neuron cell fate specification" => cdef(GO:0001708, [and=results_in_specification_of(CL:0000000)/unfolds_in(ZFA:0009052), OBO_REL:unfolds_in=cell:spinal_cord]) [-3] ! no existing xp def ! def: "The process whereby a cell becomes capable of differentiating autonomously into a motor neuron in an environment that is neutral with respect to the developmental pathway." ! PROPOSED: cell fate specification that and results_in_specification_of(CL:0000000)/unfolds_in(ZFA:0009052) and OBO_REL:unfolds_in spinal cord [cdef(GO:0001708, [and=results_in_specification_of(CL:0000000)/unfolds_in(ZFA:0009052), OBO_REL:unfolds_in=cell:spinal_cord])] [Term] id: GO:0021520 ! spinal cord motor neuron cell fate specification intersection_of: GO:0001708 ! cell fate specification intersection_of: and results_in_specification_of(CL:0000000)/unfolds_in(ZFA:0009052) intersection_of: OBO_REL:unfolds_in cell:spinal_cord ! spinal cord ! seconds spent parsing GO:0021520: 41.38 ! No parse for: GO:0021521 ventral spinal cord interneuron specification ! parse: GO:0021522 using "spinal cord motor neuron differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000100, OBO_REL:unfolds_in=MA:0000216]) [-3] ! parse: GO:0021522 using "spinal cord motor neuron differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000100, OBO_REL:unfolds_in=ZFA:0000075]) [-3] ! parse: GO:0021522 using "spinal cord motor neuron differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000100, OBO_REL:unfolds_in=cell:spinal_cord]) [-3] ! no existing xp def ! def: "The process whereby neuroepithelial cells in the ventral neural tube acquire specialized structural and/or functional features of motor neurons. Motor neurons innervate an effector (muscle or glandular) tissue and are responsible for transmission of motor impulses from the brain to the periphery. Differentiation includes the processes involved in commitment of a cell to a specific fate." ! PROPOSED: cell differentiation that OBO_REL:results_in_acquisition_of_features_of motor neuron and OBO_REL:unfolds_in spinal cord [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000100, OBO_REL:unfolds_in=cell:spinal_cord])] [Term] id: GO:0021522 ! spinal cord motor neuron differentiation intersection_of: GO:0030154 ! cell differentiation intersection_of: OBO_REL:results_in_acquisition_of_features_of CL:0000100 ! motor neuron intersection_of: OBO_REL:unfolds_in cell:spinal_cord ! spinal cord synonym: "spinal cord motoneuron cell differentiation" EXACT [OBOL:automatic] synonym: "spinal cord motoneuron differentiation" EXACT [OBOL:automatic] synonym: "spinal cord motor neuron cell differentiation" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021522: 18.65 ! parse: GO:0021523 using "somatic motor neuron differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(somatic motor neuron, cell)]) [-21] ! parse: GO:0021523 using "somatic motor neuron differentiation" => cdef(GO:0030182, [OBO_REL:results_in_acquisition_of_features_of=anon(somatic motor, cell)]) [-14] ! parse: GO:0021523 using "somatic motor neuron differentiation" => cdef(GO:0030182, [OBO_REL:results_in_developmental_progression_of=anon(somatic motor, anatomy)]) [-14] ! no existing xp def ! def: "The process whereby neuroepithelial cells in the neural tube acquire specialized structural and/or functional features of somatic motor neurons. Somatic motor neurons innervate skeletal muscle targets and are responsible for transmission of motor impulses from the brain to the periphery. Differentiation includes the processes involved in commitment of a cell to a specific fate." ! PROPOSED: neuron differentiation that OBO_REL:results_in_developmental_progression_of anon(somatic motor, anatomy) [cdef(GO:0030182, [OBO_REL:results_in_developmental_progression_of=anon(somatic motor, anatomy)])] [Term] id: GO:0021523 ! somatic motor neuron differentiation intersection_of: GO:0030182 ! neuron differentiation intersection_of: OBO_REL:results_in_developmental_progression_of anatomy:somatic_motor synonym: "somatic motor nerve cell cell differentiation" EXACT [OBOL:automatic] synonym: "somatic motor nerve cell differentiation" EXACT [OBOL:automatic] synonym: "somatic motor neuron cell differentiation" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021523: 4.98 ! parse: GO:0021527 using "spinal cord association neuron differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(association neuron, cell), OBO_REL:unfolds_in=MA:0000216]) [-20] ! parse: GO:0021527 using "spinal cord association neuron differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(association neuron, cell), OBO_REL:unfolds_in=ZFA:0000075]) [-20] ! parse: GO:0021527 using "spinal cord association neuron differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(association neuron, cell), OBO_REL:unfolds_in=cell:spinal_cord]) [-20] ! parse: GO:0021527 using "spinal cord association neuron differentiation" => cdef(GO:0030182, [OBO_REL:results_in_acquisition_of_features_of=anon(association, cell), OBO_REL:unfolds_in=MA:0000216]) [-13] ! parse: GO:0021527 using "spinal cord association neuron differentiation" => cdef(GO:0030182, [OBO_REL:results_in_acquisition_of_features_of=anon(association, cell), OBO_REL:unfolds_in=ZFA:0000075]) [-13] ! parse: GO:0021527 using "spinal cord association neuron differentiation" => cdef(GO:0030182, [OBO_REL:results_in_acquisition_of_features_of=anon(association, cell), OBO_REL:unfolds_in=cell:spinal_cord]) [-13] ! parse: GO:0021527 using "spinal cord association neuron differentiation" => cdef(GO:0030182, [OBO_REL:results_in_developmental_progression_of=anon(association, anatomy), OBO_REL:unfolds_in=MA:0000216]) [-13] ! parse: GO:0021527 using "spinal cord association neuron differentiation" => cdef(GO:0030182, [OBO_REL:results_in_developmental_progression_of=anon(association, anatomy), OBO_REL:unfolds_in=ZFA:0000075]) [-13] ! parse: GO:0021527 using "spinal cord association neuron differentiation" => cdef(GO:0030182, [OBO_REL:results_in_developmental_progression_of=anon(association, anatomy), OBO_REL:unfolds_in=cell:spinal_cord]) [-13] ! parse: GO:0021527 using "spinal cord dorsal interneuron differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(dorsal interneuron, cell), OBO_REL:unfolds_in=MA:0000216]) [-20] ! parse: GO:0021527 using "spinal cord dorsal interneuron differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(dorsal interneuron, cell), OBO_REL:unfolds_in=ZFA:0000075]) [-20] ! parse: GO:0021527 using "spinal cord dorsal interneuron differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(dorsal interneuron, cell), OBO_REL:unfolds_in=cell:spinal_cord]) [-20] ! no existing xp def ! def: "The process whereby neuroepithelial cells in the neural tube acquire specialized structural and/or functional features of association neurons. Association neurons are cells located in the dorsal portion of the spinal cord that integrate sensory input. Differentiation includes the processes involved in commitment of a cell to a specific fate." ! PROPOSED: neuron differentiation that OBO_REL:results_in_developmental_progression_of anon(association, anatomy) and OBO_REL:unfolds_in spinal cord [cdef(GO:0030182, [OBO_REL:results_in_developmental_progression_of=anon(association, anatomy), OBO_REL:unfolds_in=cell:spinal_cord])] [Term] id: GO:0021527 ! spinal cord association neuron differentiation intersection_of: GO:0030182 ! neuron differentiation intersection_of: OBO_REL:results_in_developmental_progression_of anatomy:association intersection_of: OBO_REL:unfolds_in cell:spinal_cord ! spinal cord synonym: "spinal cord association nerve cell cell differentiation" EXACT [OBOL:automatic] synonym: "spinal cord association nerve cell differentiation" EXACT [OBOL:automatic] synonym: "spinal cord association neuron cell differentiation" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021527: 23.32 ! parse: GO:0021528 using "commissural neuron differentiation in the spinal cord" => cdef(cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(commissural neuron, cell)]), [OBO_REL:unfolds_in=MA:0000216]) [-20] ! parse: GO:0021528 using "commissural neuron differentiation in the spinal cord" => cdef(cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(commissural neuron, cell)]), [OBO_REL:unfolds_in=ZFA:0000075]) [-20] ! parse: GO:0021528 using "commissural neuron differentiation in the spinal cord" => cdef(cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(commissural neuron, cell)]), [OBO_REL:unfolds_in=cell:spinal_cord]) [-20] ! parse: GO:0021528 using "commissural neuron differentiation in the spinal cord" => cdef(cdef(GO:0030182, [OBO_REL:results_in_acquisition_of_features_of=anon(commissural, cell)]), [OBO_REL:unfolds_in=MA:0000216]) [-13] ! parse: GO:0021528 using "commissural neuron differentiation in the spinal cord" => cdef(cdef(GO:0030182, [OBO_REL:results_in_acquisition_of_features_of=anon(commissural, cell)]), [OBO_REL:unfolds_in=ZFA:0000075]) [-13] ! parse: GO:0021528 using "commissural neuron differentiation in the spinal cord" => cdef(cdef(GO:0030182, [OBO_REL:results_in_acquisition_of_features_of=anon(commissural, cell)]), [OBO_REL:unfolds_in=cell:spinal_cord]) [-13] ! parse: GO:0021528 using "commissural neuron differentiation in the spinal cord" => cdef(cdef(GO:0030182, [OBO_REL:results_in_developmental_progression_of=anon(commissural, anatomy)]), [OBO_REL:unfolds_in=MA:0000216]) [-13] ! parse: GO:0021528 using "commissural neuron differentiation in the spinal cord" => cdef(cdef(GO:0030182, [OBO_REL:results_in_developmental_progression_of=anon(commissural, anatomy)]), [OBO_REL:unfolds_in=ZFA:0000075]) [-13] ! parse: GO:0021528 using "commissural neuron differentiation in the spinal cord" => cdef(cdef(GO:0030182, [OBO_REL:results_in_developmental_progression_of=anon(commissural, anatomy)]), [OBO_REL:unfolds_in=cell:spinal_cord]) [-13] ! no existing xp def ! def: "The process whereby neuroepithelial cells in the ventral neural tube acquire specialized structural and/or functional features of commissural neurons. Commissural neurons in both vertebrates and invertebrates transfer information from one side of their bodies to the other through the midline. Differentiation includes the processes involved in commitment of a cell to a specific fate." ! PROPOSED: cdef(GO:0030182, [OBO_REL:results_in_developmental_progression_of=anon(commissural, anatomy)]) that OBO_REL:unfolds_in spinal cord [cdef(cdef(GO:0030182, [OBO_REL:results_in_developmental_progression_of=anon(commissural, anatomy)]), [OBO_REL:unfolds_in=cell:spinal_cord])] [Term] id: GO:0021528 ! commissural neuron differentiation in the spinal cord intersection_of: commissural_nerve_cell_cell_differentiation intersection_of: OBO_REL:unfolds_in cell:spinal_cord ! spinal cord ! seconds spent parsing GO:0021528: 5.66 ! parse: GO:0021529 using "spinal cord oligodendrocyte cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000000, OBO_REL:unfolds_in=cdef(ZFA:0009076, [OBO_REL:part_of=MA:0000216])]) [-4] ! parse: GO:0021529 using "spinal cord oligodendrocyte cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000000, OBO_REL:unfolds_in=cdef(ZFA:0009076, [OBO_REL:part_of=ZFA:0000075])]) [-4] ! parse: GO:0021529 using "spinal cord oligodendrocyte cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000128, OBO_REL:unfolds_in=MA:0000216]) [-3] ! parse: GO:0021529 using "spinal cord oligodendrocyte cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000128, OBO_REL:unfolds_in=ZFA:0000075]) [-3] ! parse: GO:0021529 using "spinal cord oligodendrocyte cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000128, OBO_REL:unfolds_in=cell:spinal_cord]) [-3] ! parse: GO:0021529 using "spinal cord oligodendrocyte cell differentiation" => cdef(GO:0030154, [and=results_in_acquisition_of_features_of(CL:0000000)/unfolds_in(CL:0000128), OBO_REL:unfolds_in=MA:0000216]) [-3] ! parse: GO:0021529 using "spinal cord oligodendrocyte cell differentiation" => cdef(GO:0030154, [and=results_in_acquisition_of_features_of(CL:0000000)/unfolds_in(CL:0000128), OBO_REL:unfolds_in=ZFA:0000075]) [-3] ! parse: GO:0021529 using "spinal cord oligodendrocyte cell differentiation" => cdef(GO:0030154, [and=results_in_acquisition_of_features_of(CL:0000000)/unfolds_in(CL:0000128), OBO_REL:unfolds_in=cell:spinal_cord]) [-3] ! parse: GO:0021529 using "spinal cord oligodendrocyte cell differentiation" => cdef(GO:0030154, [and=results_in_acquisition_of_features_of(CL:0000000)/unfolds_in(ZFA:0009076), OBO_REL:unfolds_in=MA:0000216]) [-3] ! parse: GO:0021529 using "spinal cord oligodendrocyte cell differentiation" => cdef(GO:0030154, [and=results_in_acquisition_of_features_of(CL:0000000)/unfolds_in(ZFA:0009076), OBO_REL:unfolds_in=ZFA:0000075]) [-3] ! parse: GO:0021529 using "spinal cord oligodendrocyte cell differentiation" => cdef(GO:0030154, [and=results_in_acquisition_of_features_of(CL:0000000)/unfolds_in(ZFA:0009076), OBO_REL:unfolds_in=cell:spinal_cord]) [-3] ! parse: GO:0021529 using "spinal cord oligodendrocyte cell differentiation" => cdef(GO:0048709, [OBO_REL:results_in_acquisition_of_features_of=cell:spinal_cord]) [-2] ! parse: GO:0021529 using "spinal cord oligodendrocyte cell differentiation" => cdef(GO:0048709, [OBO_REL:results_in_developmental_progression_of=MA:0000216]) [-2] ! parse: GO:0021529 using "spinal cord oligodendrocyte cell differentiation" => cdef(GO:0048709, [OBO_REL:results_in_developmental_progression_of=ZFA:0000075]) [-2] ! parse: GO:0021529 using "spinal cord oligodendrocyte cell differentiation" => cdef(GO:0048709, [OBO_REL:results_in_developmental_progression_of=cell:spinal_cord]) [-2] ! no existing xp def ! def: "The process whereby neuroepithelial cells in the neural tube acquire specialized structural and/or functional features of oligodendrocytes. Oligodendrocytes are non-neuronal cells. The primary function of oligodendrocytes is the myelination of nerve axons in the central nervous system. Differentiation includes the processes involved in commitment of a cell to a specific fate." ! PROPOSED: oligodendrocyte differentiation that OBO_REL:results_in_developmental_progression_of spinal cord [cdef(GO:0048709, [OBO_REL:results_in_developmental_progression_of=cell:spinal_cord])] [Term] id: GO:0021529 ! spinal cord oligodendrocyte cell differentiation intersection_of: GO:0048709 ! oligodendrocyte differentiation intersection_of: OBO_REL:results_in_developmental_progression_of cell:spinal_cord ! spinal cord synonym: "spinal cord oligodendrocyte differentiation" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021529: 33.41 ! parse: GO:0021530 using "spinal cord oligodendrocyte cell fate specification" => cdef(GO:0001708, [OBO_REL:results_in_specification_of=CL:0000000, OBO_REL:unfolds_in=cdef(ZFA:0009076, [OBO_REL:part_of=MA:0000216])]) [-4] ! parse: GO:0021530 using "spinal cord oligodendrocyte cell fate specification" => cdef(GO:0001708, [OBO_REL:results_in_specification_of=CL:0000000, OBO_REL:unfolds_in=cdef(ZFA:0009076, [OBO_REL:part_of=ZFA:0000075])]) [-4] ! parse: GO:0021530 using "spinal cord oligodendrocyte cell fate specification" => cdef(GO:0001708, [OBO_REL:results_in_specification_of=CL:0000128, OBO_REL:unfolds_in=MA:0000216]) [-3] ! parse: GO:0021530 using "spinal cord oligodendrocyte cell fate specification" => cdef(GO:0001708, [OBO_REL:results_in_specification_of=CL:0000128, OBO_REL:unfolds_in=ZFA:0000075]) [-3] ! parse: GO:0021530 using "spinal cord oligodendrocyte cell fate specification" => cdef(GO:0001708, [OBO_REL:results_in_specification_of=CL:0000128, OBO_REL:unfolds_in=cell:spinal_cord]) [-3] ! parse: GO:0021530 using "spinal cord oligodendrocyte cell fate specification" => cdef(GO:0001708, [and=results_in_specification_of(CL:0000000)/unfolds_in(CL:0000128), OBO_REL:unfolds_in=MA:0000216]) [-3] ! parse: GO:0021530 using "spinal cord oligodendrocyte cell fate specification" => cdef(GO:0001708, [and=results_in_specification_of(CL:0000000)/unfolds_in(CL:0000128), OBO_REL:unfolds_in=ZFA:0000075]) [-3] ! parse: GO:0021530 using "spinal cord oligodendrocyte cell fate specification" => cdef(GO:0001708, [and=results_in_specification_of(CL:0000000)/unfolds_in(CL:0000128), OBO_REL:unfolds_in=cell:spinal_cord]) [-3] ! parse: GO:0021530 using "spinal cord oligodendrocyte cell fate specification" => cdef(GO:0001708, [and=results_in_specification_of(CL:0000000)/unfolds_in(ZFA:0009076), OBO_REL:unfolds_in=MA:0000216]) [-3] ! parse: GO:0021530 using "spinal cord oligodendrocyte cell fate specification" => cdef(GO:0001708, [and=results_in_specification_of(CL:0000000)/unfolds_in(ZFA:0009076), OBO_REL:unfolds_in=ZFA:0000075]) [-3] ! parse: GO:0021530 using "spinal cord oligodendrocyte cell fate specification" => cdef(GO:0001708, [and=results_in_specification_of(CL:0000000)/unfolds_in(ZFA:0009076), OBO_REL:unfolds_in=cell:spinal_cord]) [-3] ! parse: GO:0021530 using "spinal cord oligodendrocyte cell fate specification" => cdef(GO:0021778, [OBO_REL:results_in_specification_of=cell:spinal_cord]) [-2] ! no existing xp def ! def: "The process whereby a cell becomes capable of differentiating autonomously into an oligodendrocyte in an environment that is neutral with respect to the developmental pathway." ! PROPOSED: oligodendrocyte cell fate specification that OBO_REL:results_in_specification_of spinal cord [cdef(GO:0021778, [OBO_REL:results_in_specification_of=cell:spinal_cord])] [Term] id: GO:0021530 ! spinal cord oligodendrocyte cell fate specification intersection_of: GO:0021778 ! oligodendrocyte cell fate specification intersection_of: OBO_REL:results_in_specification_of cell:spinal_cord ! spinal cord synonym: "spinal cord oligodendrocyte fate specification" EXACT [OBOL:automatic] synonym: "spinal cord oligodendrocyte specification" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021530: 33.44 ! Already have xp for: GO:0021531 radial glial cell differentiation in the spinal cord ! CURRENT : radial glial cell differentiation that OBO_REL:unfolds_in spinal cord and OBO_REL:unfolds_in spinal cord [cdef(GO:0060019, [OBO_REL:unfolds_in=cell:spinal_cord, OBO_REL:unfolds_in=continuant:spinal_cord])] ! parse: GO:0021532 using "neural tube patterning" => cdef(GO:0007389, [OBO_REL:results_in_patterning_for=ZFA:0001135]) [-2] ! no existing xp def ! def: "The regionalization process that regulates the coordinated growth that establishes the non-random spatial arrangement of the neural tube." ! PROPOSED: pattern specification process that OBO_REL:results_in_patterning_for neural tube [cdef(GO:0007389, [OBO_REL:results_in_patterning_for=ZFA:0001135])] [Term] id: GO:0021532 ! neural tube patterning intersection_of: GO:0007389 ! pattern specification process intersection_of: OBO_REL:results_in_patterning_for ZFA:0001135 ! neural tube synonym: "presumptive central nervous system pattern biosynthesis" EXACT [OBOL:automatic] synonym: "presumptive central nervous system pattern formation" EXACT [OBOL:automatic] synonym: "presumptive central nervous system pattern specification process" EXACT [OBOL:automatic] synonym: "presumptive central nervous system patterning" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021532: 4.95 ! parse: GO:0021533 using "cell differentiation in hindbrain" => cdef(GO:0030154, [OBO_REL:unfolds_in=MA:0000195]) [-2] ! parse: GO:0021533 using "cell differentiation in hindbrain" => cdef(GO:0030154, [OBO_REL:unfolds_in=ZFA:0000029]) [-2] ! parse: GO:0021533 using "cell differentiation in hindbrain" => cdef(cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000000]), [OBO_REL:unfolds_in=MA:0000195]) [-3] ! parse: GO:0021533 using "cell differentiation in hindbrain" => cdef(cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000000]), [OBO_REL:unfolds_in=ZFA:0000029]) [-3] ! no existing xp def ! def: "The process whereby relatively unspecialized cells acquire specialized structural and/or functional features that characterize the mature cells of the hindbrain. Differentiation includes the processes involved in commitment of a cell to a specific fate." ! PROPOSED: cell differentiation that OBO_REL:unfolds_in hindbrain [cdef(GO:0030154, [OBO_REL:unfolds_in=ZFA:0000029])] [Term] id: GO:0021533 ! cell differentiation in hindbrain intersection_of: GO:0030154 ! cell differentiation intersection_of: OBO_REL:unfolds_in ZFA:0000029 ! hindbrain ! seconds spent parsing GO:0021533: 11.35 ! parse: GO:0021534 using "cell proliferation in hindbrain" => cdef(GO:0008283, [OBO_REL:unfolds_in=MA:0000195]) [-2] ! parse: GO:0021534 using "cell proliferation in hindbrain" => cdef(GO:0008283, [OBO_REL:unfolds_in=ZFA:0000029]) [-2] ! parse: GO:0021534 using "cell proliferation in hindbrain" => cdef(cdef(GO:0008283, [OBO_REL:increases_population_size_of=CL:0000000]), [OBO_REL:unfolds_in=MA:0000195]) [-3] ! parse: GO:0021534 using "cell proliferation in hindbrain" => cdef(cdef(GO:0008283, [OBO_REL:increases_population_size_of=CL:0000000]), [OBO_REL:unfolds_in=ZFA:0000029]) [-3] ! parse: GO:0021534 using "cell proliferation in hindbrain" => cdef(cdef(ZFA:0000098, [OBO_REL:results_in_division_of=CL:0000000]), [OBO_REL:unfolds_in=MA:0000195]) [-3] ! parse: GO:0021534 using "cell proliferation in hindbrain" => cdef(cdef(ZFA:0000098, [OBO_REL:results_in_division_of=CL:0000000]), [OBO_REL:unfolds_in=ZFA:0000029]) [-3] ! no existing xp def ! def: "The multiplication or reproduction of cells, resulting in the rapid expansion of a cell population in the hindbrain." ! PROPOSED: cell proliferation that OBO_REL:unfolds_in hindbrain [cdef(GO:0008283, [OBO_REL:unfolds_in=ZFA:0000029])] [Term] id: GO:0021534 ! cell proliferation in hindbrain intersection_of: GO:0008283 ! cell proliferation intersection_of: OBO_REL:unfolds_in ZFA:0000029 ! hindbrain ! seconds spent parsing GO:0021534: 17.8 ! parse: GO:0021535 using "cell migration in hindbrain" => cdef(GO:0016477, [OBO_REL:unfolds_in=MA:0000195]) [-2] ! parse: GO:0021535 using "cell migration in hindbrain" => cdef(GO:0016477, [OBO_REL:unfolds_in=ZFA:0000029]) [-2] ! parse: GO:0021535 using "cell migration in hindbrain" => cdef(cdef(GO:0016477, [OBO_REL:results_in_movement_of=CL:0000000]), [OBO_REL:unfolds_in=MA:0000195]) [-3] ! parse: GO:0021535 using "cell migration in hindbrain" => cdef(cdef(GO:0016477, [OBO_REL:results_in_movement_of=CL:0000000]), [OBO_REL:unfolds_in=ZFA:0000029]) [-3] ! no existing xp def ! def: "The orderly movement of cells that will reside in the hindbrain." ! PROPOSED: cell migration that OBO_REL:unfolds_in hindbrain [cdef(GO:0016477, [OBO_REL:unfolds_in=ZFA:0000029])] [Term] id: GO:0021535 ! cell migration in hindbrain intersection_of: GO:0016477 ! cell migration intersection_of: OBO_REL:unfolds_in ZFA:0000029 ! hindbrain ! seconds spent parsing GO:0021535: 11.15 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0021536 using "diencephalon development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000171]) [-2] ! parse: GO:0021536 using "diencephalon development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000101]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the diencephalon over time, from its formation to the mature structure. The diencephalon is the paired caudal parts of the prosencephalon from which the thalamus, hypothalamus, epithalamus and subthalamus are derived; these regions regulate autonomic, visceral and endocrine function, and process information directed to the cerebral cortex." ! PROPOSED: developmental process that results_in_complete_developmental_of diencephalon [cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000101])] [Term] id: GO:0021536 ! diencephalon development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of ZFA:0000101 ! diencephalon ! seconds spent parsing GO:0021536: 5.32 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0021537 using "telencephalon development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000183]) [-2] ! parse: GO:0021537 using "telencephalon development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000079]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the telencephalon over time, from its formation to the mature structure. The telencephalon is the paired anteriolateral division of the prosencephalon plus the lamina terminalis from which the olfactory lobes, cerebral cortex, and subcortical nuclei are derived." ! PROPOSED: developmental process that results_in_complete_developmental_of telencephalon [cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000079])] [Term] id: GO:0021537 ! telencephalon development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of ZFA:0000079 ! telencephalon ! seconds spent parsing GO:0021537: 5.32 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0021538 using "epithalamus development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000172]) [-2] ! parse: GO:0021538 using "epithalamus development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000509]) [-2] ! no existing xp def ! def: "The progression of the epithalamus over time from its initial formation until its mature state. The epithalamus is the small dorsomedial area of the thalamus including the habenular nuclei and associated fiber bundles, the pineal body, and the epithelial roof of the third ventricle." ! PROPOSED: developmental process that results_in_complete_developmental_of epithalamus [cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000509])] [Term] id: GO:0021538 ! epithalamus development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of ZFA:0000509 ! epithalamus ! seconds spent parsing GO:0021538: 5.31 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0021539 using "subthalamus development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000181]) [-2] ! parse: GO:0021539 using "ventral thalamus development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000181]) [-2] ! parse: GO:0021539 using "ventral thalamus development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000458]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the subthalamus over time, from its formation to the mature structure. The subthalamus is the anterior part of the diencephalon that lies between the thalamus, hypothalamus, and tegmentum of the mesencephalon, including subthalamic nucleus, zona incerta, the fields of Forel, and the nucleus of ansa lenticularis." ! PROPOSED: developmental process that results_in_complete_developmental_of ventral thalamus [cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000458])] [Term] id: GO:0021539 ! subthalamus development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of ZFA:0000458 ! ventral thalamus synonym: "prethalamus development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021539: 10.39 ! parse: GO:0021540 using "corpus callosum morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000188]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the corpus callosum over time, from its formation to the mature structure. The corpus callosum is a thick bundle of nerve fibers comprising a commissural plate connecting the two cerebral hemispheres. It consists of contralateral axon projections that provides communications between the right and left cerebral hemispheres." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of corpus callosum [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000188])] [Term] id: GO:0021540 ! corpus callosum morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of MA:0000188 ! corpus callosum ! seconds spent parsing GO:0021540: 5.15 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0021541 using "Ammon's horn development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(Ammon ' s horn, anatomy)]) [-15] ! parse: GO:0021541 using "ammon gyrus development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(ammon gyrus, anatomy)]) [-12] ! parse: GO:0021541 using "cornu ammonis development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(cornu ammonis, anatomy)]) [-14] ! no existing xp def ! def: "The process whose specific outcome is the progression of the ammon gyrus over time, from its formation to the mature structure. The ammon gyrus, often subdivided into the CA1 and CA3 regions, is one of the two interlocking gyri of the hippocampus that is rich in large pyramidal neurons." ! PROPOSED: developmental process that results_in_complete_developmental_of anon(ammon gyrus, anatomy) [cdef(GO:0032502, [results_in_complete_developmental_of=anon(ammon gyrus, anatomy)])] [Term] id: GO:0021541 ! ammon gyrus development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of anatomy:ammon_gyrus ! seconds spent parsing GO:0021541: 13.23 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0021542 using "dentate gyrus development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000190]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the dentate gyrus over time, from its formation to the mature structure. The dentate gyrus is one of two interlocking gyri of the hippocampus. It contains granule cells, which project to the pyramidal cells and interneurons of the CA3 region of the ammon gyrus." ! PROPOSED: developmental process that results_in_complete_developmental_of dentate gyrus [cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000190])] [Term] id: GO:0021542 ! dentate gyrus development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of MA:0000190 ! dentate gyrus ! seconds spent parsing GO:0021542: 4.66 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0021545 using "cranial nerve development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000215]) [-2] ! parse: GO:0021545 using "cranial nerve development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000641]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the cranial nerves over time, from its formation to the mature structure. The cranial nerves are composed of twelve pairs of nerves that emanate from the nervous tissue of the hindbrain. These nerves are sensory, motor, or mixed in nature, and provide the motor and general sensory innervation of the head, neck and viscera. They mediate vision, hearing, olfaction and taste and carry the parasympathetic innervation of the autonomic ganglia that control visceral functions." ! PROPOSED: developmental process that results_in_complete_developmental_of cranial nerve [cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000641])] [Term] id: GO:0021545 ! cranial nerve development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of ZFA:0000641 ! cranial nerve synonym: "cranial nerves development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021545: 5.43 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0021546 using "rhombomere development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0001064]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the rhombomere over time, from its formation to the mature structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates." ! PROPOSED: developmental process that results_in_complete_developmental_of rhombomere [cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0001064])] [Term] id: GO:0021546 ! rhombomere development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of ZFA:0001064 ! rhombomere synonym: "hindbrain segment development" EXACT [OBOL:automatic] synonym: "neuromeres development" EXACT [OBOL:automatic] synonym: "rhombomeres development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021546: 4.67 ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0021547 using "MHB biosynthesis" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=ZFA:0001187]) [-2] ! parse: GO:0021547 using "MHB formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=ZFA:0001187]) [-2] ! parse: GO:0021547 using "MHB formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0001187]) [-2] ! parse: GO:0021547 using "isthmus biosynthesis" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=ZFA:0000042]) [-2] ! parse: GO:0021547 using "isthmus formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=ZFA:0000042]) [-2] ! parse: GO:0021547 using "isthmus formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0000042]) [-2] ! parse: GO:0021547 using "midbrain-hindbrain boundary formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(- hindbrain boundary, anatomy), OBO_REL:unfolds_in=MA:0000207]) [-22] ! parse: GO:0021547 using "midbrain-hindbrain boundary formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(- hindbrain boundary, anatomy), OBO_REL:unfolds_in=ZFA:0000128]) [-22] ! no existing xp def ! def: "The regionalization process that gives rise to the midbrain-hindbrain boundary. The midbrain-hindbrain domain of the embryonic brain is comprised of the mesencephalic vesicle and the first rhombencephalic vesicle at early somitogenesis stages. An organizing center at the boundary patterns the midbrain and hindbrain primordia of the neural plate." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of presumptive midbrain hindbrain boundary [cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0001187])] [Term] id: GO:0021547 ! midbrain-hindbrain boundary initiation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of ZFA:0001187 ! presumptive midbrain hindbrain boundary synonym: "presumptive midbrain hindbrain boundary anatomical structure formation" EXACT [OBOL:automatic] synonym: "presumptive midbrain hindbrain boundary formation" EXACT [OBOL:automatic] synonym: "presumptive midbrain hindbrain boundary formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021547: 50.65 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0021549 using "cerebellum development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000198]) [-2] ! parse: GO:0021549 using "cerebellum development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000100]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the cerebellum over time, from its formation to the mature structure. The cerebellum is the portion of the brain in the back of the head between the cerebrum and the pons. In mice, the cerebellum controls balance for walking and standing, modulates the force and range of movement and is involved in the learning of motor skills." ! PROPOSED: developmental process that results_in_complete_developmental_of cerebellum [cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000100])] [Term] id: GO:0021549 ! cerebellum development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of ZFA:0000100 ! cerebellum ! seconds spent parsing GO:0021549: 5.31 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0021550 using "medulla development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00003748]) [-2] ! parse: GO:0021550 using "medulla oblongata development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000206]) [-2] ! parse: GO:0021550 using "medulla oblongata development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000545]) [-2] ! parse: GO:0021550 using "medulla oblongata development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(oblongata, anatomy), OBO_REL:unfolds_in=FBbt:00003748]) [-11] ! parse: GO:0021550 using "myelencephalon development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000205]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the medulla oblongata over time, from its formation to the mature structure. The medulla oblongata lies directly above the spinal cord and controls vital autonomic functions such as digestion, breathing and the control of heart rate." ! PROPOSED: developmental process that results_in_complete_developmental_of medulla oblongata [cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000545])] [Term] id: GO:0021550 ! medulla oblongata development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of ZFA:0000545 ! medulla oblongata ! seconds spent parsing GO:0021550: 19.1 ! parse: GO:0021551 using "central nervous system morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00005094]) [-2] ! parse: GO:0021551 using "central nervous system morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000167]) [-2] ! parse: GO:0021551 using "central nervous system morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0000012]) [-2] ! no existing xp def ! def: "The process by which the anatomical structure of the central nervous system is generated and organized. Morphogenesis pertains to the creation of form. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of central nervous system [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0000012])] [Term] id: GO:0021551 ! central nervous system morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0000012 ! central nervous system synonym: "cns anatomical structure morphogenesis" EXACT [OBOL:automatic] synonym: "cns morphogenesis" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021551: 7.84 ! parse: GO:0021552 using "MHB structural organization" => cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=ZFA:0001187]) [-2] ! parse: GO:0021552 using "isthmus structural organization" => cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=ZFA:0000042]) [-2] ! parse: GO:0021552 using "midbrain-hindbrain boundary structural organization" => cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=anon(- hindbrain boundary, anatomy), OBO_REL:unfolds_in=MA:0000207]) [-22] ! parse: GO:0021552 using "midbrain-hindbrain boundary structural organization" => cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=anon(- hindbrain boundary, anatomy), OBO_REL:unfolds_in=ZFA:0000128]) [-22] ! no existing xp def ! def: "The process that contributes to the act of creating the structural organization of the midbrain-hindbrain boundary structure. The midbrain-hindbrain domain of the embryonic brain is comprised of the mesencephalic vesicle and the first rhombencephalic vesicle at early somitogenesis stages. An organizing center at the boundary patterns the midbrain and hindbrain primordia of the neural plate." ! PROPOSED: organization of an anatomical structure that OBO_REL:results_in_developmental_progression_of presumptive midbrain hindbrain boundary [cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=ZFA:0001187])] [Term] id: GO:0021552 ! midbrain-hindbrain boundary structural organization intersection_of: GO:0048532 ! organization of an anatomical structure intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0001187 ! presumptive midbrain hindbrain boundary synonym: "presumptive midbrain hindbrain boundary anatomical structure organization" EXACT [OBOL:automatic] synonym: "presumptive midbrain hindbrain boundary organization of an anatomical structure" EXACT [OBOL:automatic] synonym: "presumptive midbrain hindbrain boundary structural organization" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021552: 20.39 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0021553 using "CN 1 development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(CN 1, anatomy)]) [-5] ! parse: GO:0021553 using "cranial nerve 1 development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(1, anatomy), OBO_REL:unfolds_in=MA:0000215]) [-3] ! parse: GO:0021553 using "cranial nerve 1 development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(1, anatomy), OBO_REL:unfolds_in=ZFA:0000641]) [-3] ! parse: GO:0021553 using "cranial nerve I development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000249]) [-2] ! parse: GO:0021553 using "cranial nerve I development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(I, anatomy), OBO_REL:unfolds_in=MA:0000215]) [-3] ! parse: GO:0021553 using "cranial nerve I development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(I, anatomy), OBO_REL:unfolds_in=ZFA:0000641]) [-3] ! parse: GO:0021553 using "olfactory nerve development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000249]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the olfactory nerve over time, from its formation to the mature structure. The olfactory nerve is a collection of sensory nerve rootlets that extend down from the olfactory bulb to the olfactory mucosa of the upper parts of the nasal cavity. This nerve conducts odor information to the brainstem." ! PROPOSED: developmental process that results_in_complete_developmental_of cranial nerve I [cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000249])] [Term] id: GO:0021553 ! olfactory nerve development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of ZFA:0000249 ! cranial nerve I synonym: "CN-I development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021553: 27.93 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0021554 using "CN II development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(CN II, anatomy)]) [-6] ! parse: GO:0021554 using "cranial nerve 2 development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(2, anatomy), OBO_REL:unfolds_in=MA:0000215]) [-3] ! parse: GO:0021554 using "cranial nerve 2 development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(2, anatomy), OBO_REL:unfolds_in=ZFA:0000641]) [-3] ! parse: GO:0021554 using "cranial nerve II development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000435]) [-2] ! parse: GO:0021554 using "cranial nerve II development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(II, anatomy), OBO_REL:unfolds_in=MA:0000215]) [-4] ! parse: GO:0021554 using "cranial nerve II development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(II, anatomy), OBO_REL:unfolds_in=ZFA:0000641]) [-4] ! parse: GO:0021554 using "optic nerve development" => cdef(GO:0021675, [OBO_REL:results_in_developmental_progression_of=ZFA:0000435]) [-2] ! parse: GO:0021554 using "optic nerve development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=FBbt:00005105, OBO_REL:unfolds_in=ZFA:0000435]) [-3] ! parse: GO:0021554 using "optic nerve development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=MA:0000217, OBO_REL:unfolds_in=ZFA:0000435]) [-3] ! parse: GO:0021554 using "optic nerve development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00001956]) [-2] ! parse: GO:0021554 using "optic nerve development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00005105, OBO_REL:unfolds_in=ZFA:0000435]) [-3] ! parse: GO:0021554 using "optic nerve development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000217, OBO_REL:unfolds_in=ZFA:0000435]) [-3] ! parse: GO:0021554 using "optic nerve development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000435]) [-2] ! parse: GO:0021554 using "optic nerve development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(FBbt:00005105, [OBO_REL:part_of=ZFA:0000435])]) [-3] ! parse: GO:0021554 using "optic nerve development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(MA:0000217, [OBO_REL:part_of=ZFA:0000435])]) [-3] ! no existing xp def ! def: "The process whose specific outcome is the progression of the optic nerve over time, from its formation to the mature structure. The sensory optic nerve originates from the bipolar cells of the retina and conducts visual information to the brainstem. The optic nerve exits the back of the eye in the orbit, enters the optic canal, and enters the central nervous system at the optic chiasm (crossing) where the nerve fibers become the optic tract just prior to entering the hindbrain." ! PROPOSED: developmental process that results_in_complete_developmental_of cranial nerve II [cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000435])] [Term] id: GO:0021554 ! optic nerve development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of ZFA:0000435 ! cranial nerve II ! seconds spent parsing GO:0021554: 36.94 ! parse: GO:0021555 using "MHB morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0001187]) [-2] ! parse: GO:0021555 using "isthmus morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0000042]) [-2] ! parse: GO:0021555 using "midbrain-hindbrain boundary morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(- hindbrain boundary, anatomy), OBO_REL:unfolds_in=MA:0000207]) [-22] ! parse: GO:0021555 using "midbrain-hindbrain boundary morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(- hindbrain boundary, anatomy), OBO_REL:unfolds_in=ZFA:0000128]) [-22] ! no existing xp def ! def: "The process by which the anatomical structure of the midbrain-hindbrain boundary is generated and organized. Morphogenesis pertains to the creation of form. The midbrain-hindbrain domain of the embryonic brain is comprised of the mesencephalic vesicle and the first rhombencephalic vesicle at early somitogenesis stages. An organizing center at the boundary patterns the midbrain and hindbrain primordia of the neural plate." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of presumptive midbrain hindbrain boundary [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0001187])] [Term] id: GO:0021555 ! midbrain-hindbrain boundary morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0001187 ! presumptive midbrain hindbrain boundary synonym: "presumptive midbrain hindbrain boundary anatomical structure morphogenesis" EXACT [OBOL:automatic] synonym: "presumptive midbrain hindbrain boundary morphogenesis" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021555: 20.3 ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0021556 using "central nervous system formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=FBbt:00005094]) [-2] ! parse: GO:0021556 using "central nervous system formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=MA:0000167]) [-2] ! parse: GO:0021556 using "central nervous system formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=ZFA:0000012]) [-2] ! parse: GO:0021556 using "central nervous system formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=FBbt:00005094]) [-2] ! parse: GO:0021556 using "central nervous system formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=MA:0000167]) [-2] ! parse: GO:0021556 using "central nervous system formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0000012]) [-2] ! no existing xp def ! def: "The process that gives rise to the central nervous system. This process pertains to the initial formation of a structure from unspecified parts. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of central nervous system [cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0000012])] [Term] id: GO:0021556 ! central nervous system formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of ZFA:0000012 ! central nervous system synonym: "cns anatomical structure formation" EXACT [OBOL:automatic] synonym: "cns formation" EXACT [OBOL:automatic] synonym: "cns formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021556: 7.96 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0021557 using "CN III development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(CN III, anatomy)]) [-7] ! parse: GO:0021557 using "cranial nerve 3 development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(3, anatomy), OBO_REL:unfolds_in=MA:0000215]) [-3] ! parse: GO:0021557 using "cranial nerve 3 development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(3, anatomy), OBO_REL:unfolds_in=ZFA:0000641]) [-3] ! parse: GO:0021557 using "cranial nerve III development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000405]) [-2] ! parse: GO:0021557 using "cranial nerve III development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(III, anatomy), OBO_REL:unfolds_in=MA:0000215]) [-5] ! parse: GO:0021557 using "cranial nerve III development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(III, anatomy), OBO_REL:unfolds_in=ZFA:0000641]) [-5] ! parse: GO:0021557 using "oculomotor nerve development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000405]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the oculomotor nerve over time, from its formation to the mature structure. This motor nerve innervates all extraocular muscles except the superior oblique and the lateral rectus muscles. The superior division supplies the levator palpebrae superioris and superior rectus muscles. The inferior division supplies the medial rectus, inferior rectus and inferior oblique muscles. This nerve also innervates the striated muscles of the eyelid. Pupillary constriction and lens movement are mediated by this nerve for near vision. In the orbit the inferior division sends branches that enter the ciliary ganglion where they form functional contacts (synapses) with the ganglion cells. The ganglion cells send nerve fibers into the back of the eye where they travel to ultimately innervate the ciliary muscle and the constrictor pupillae muscle." ! PROPOSED: developmental process that results_in_complete_developmental_of cranial nerve III [cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000405])] [Term] id: GO:0021557 ! oculomotor nerve development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of ZFA:0000405 ! cranial nerve III synonym: "CN-III development" EXACT [OBOL:automatic] synonym: "occulomotor development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021557: 27.97 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0021558 using "CN IV development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(CN IV, anatomy)]) [-6] ! parse: GO:0021558 using "cranial nerve 4 development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(4, anatomy), OBO_REL:unfolds_in=MA:0000215]) [-3] ! parse: GO:0021558 using "cranial nerve 4 development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(4, anatomy), OBO_REL:unfolds_in=ZFA:0000641]) [-3] ! parse: GO:0021558 using "cranial nerve IV development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000600]) [-2] ! parse: GO:0021558 using "cranial nerve IV development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(IV, anatomy), OBO_REL:unfolds_in=MA:0000215]) [-4] ! parse: GO:0021558 using "cranial nerve IV development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(IV, anatomy), OBO_REL:unfolds_in=ZFA:0000641]) [-4] ! parse: GO:0021558 using "trochlear nerve development" => cdef(GO:0021675, [OBO_REL:results_in_developmental_progression_of=ZFA:0000600]) [-2] ! parse: GO:0021558 using "trochlear nerve development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=FBbt:00005105, OBO_REL:unfolds_in=ZFA:0000600]) [-3] ! parse: GO:0021558 using "trochlear nerve development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=MA:0000217, OBO_REL:unfolds_in=ZFA:0000600]) [-3] ! parse: GO:0021558 using "trochlear nerve development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00005105, OBO_REL:unfolds_in=ZFA:0000600]) [-3] ! parse: GO:0021558 using "trochlear nerve development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000217, OBO_REL:unfolds_in=ZFA:0000600]) [-3] ! parse: GO:0021558 using "trochlear nerve development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000600]) [-2] ! parse: GO:0021558 using "trochlear nerve development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(FBbt:00005105, [OBO_REL:part_of=ZFA:0000600])]) [-3] ! parse: GO:0021558 using "trochlear nerve development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(MA:0000217, [OBO_REL:part_of=ZFA:0000600])]) [-3] ! no existing xp def ! def: "The process whose specific outcome is the progression of the trochlear nerve over time, from its formation to the mature structure. The trochlear nerve is a motor nerve and is the only cranial nerve to exit the brain dorsally. The trochlear nerve innervates the superior oblique muscle." ! PROPOSED: developmental process that results_in_complete_developmental_of cranial nerve IV [cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000600])] [Term] id: GO:0021558 ! trochlear nerve development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of ZFA:0000600 ! cranial nerve IV synonym: "CN-IV development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021558: 30.79 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0021559 using "CN V development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(CN V, anatomy)]) [-5] ! parse: GO:0021559 using "cranial nerve 5 development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(5, anatomy), OBO_REL:unfolds_in=MA:0000215]) [-3] ! parse: GO:0021559 using "cranial nerve 5 development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(5, anatomy), OBO_REL:unfolds_in=ZFA:0000641]) [-3] ! parse: GO:0021559 using "cranial nerve V development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=FBbt:00002708, OBO_REL:unfolds_in=MA:0000215]) [-3] ! parse: GO:0021559 using "cranial nerve V development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=FBbt:00002708, OBO_REL:unfolds_in=ZFA:0000641]) [-3] ! parse: GO:0021559 using "cranial nerve V development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=FBbt:00005902, OBO_REL:unfolds_in=MA:0000215]) [-3] ! parse: GO:0021559 using "cranial nerve V development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=FBbt:00005902, OBO_REL:unfolds_in=ZFA:0000641]) [-3] ! parse: GO:0021559 using "cranial nerve V development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00002708, OBO_REL:unfolds_in=MA:0000215]) [-3] ! parse: GO:0021559 using "cranial nerve V development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00002708, OBO_REL:unfolds_in=ZFA:0000641]) [-3] ! parse: GO:0021559 using "cranial nerve V development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00005902, OBO_REL:unfolds_in=MA:0000215]) [-3] ! parse: GO:0021559 using "cranial nerve V development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00005902, OBO_REL:unfolds_in=ZFA:0000641]) [-3] ! parse: GO:0021559 using "cranial nerve V development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000697]) [-2] ! parse: GO:0021559 using "cranial nerve V development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(FBbt:00002708, [OBO_REL:part_of=MA:0000215])]) [-3] ! parse: GO:0021559 using "cranial nerve V development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(FBbt:00002708, [OBO_REL:part_of=ZFA:0000641])]) [-3] ! parse: GO:0021559 using "cranial nerve V development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(FBbt:00005902, [OBO_REL:part_of=MA:0000215])]) [-3] ! parse: GO:0021559 using "cranial nerve V development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(FBbt:00005902, [OBO_REL:part_of=ZFA:0000641])]) [-3] ! parse: GO:0021559 using "trigeminal nerve development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000697]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the trigeminal nerve over time, from its formation to the mature structure. The trigeminal nerve is composed of three large branches. They are the ophthalmic (V1, sensory), maxillary (V2, sensory) and mandibular (V3, motor and sensory) branches. The sensory ophthalmic branch travels through the superior orbital fissure and passes through the orbit to reach the skin of the forehead and top of the head. The maxillary nerve contains sensory branches that reach the pterygopalatine fossa via the inferior orbital fissure (face, cheek and upper teeth) and pterygopalatine canal (soft and hard palate, nasal cavity and pharynx). The motor part of the mandibular branch is distributed to the muscles of mastication, the mylohyoid muscle and the anterior belly of the digastric. The mandibular nerve also innervates the tensor veli palatini and tensor tympani muscles. The sensory part of the mandibular nerve is composed of branches that carry general sensory information from the mucous membranes of the mouth and cheek, anterior two-thirds of the tongue, lower teeth, skin of the lower jaw, side of the head and scalp and meninges of the anterior and middle cranial fossae." ! PROPOSED: developmental process that results_in_complete_developmental_of cranial nerve V [cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000697])] [Term] id: GO:0021559 ! trigeminal nerve development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of ZFA:0000697 ! cranial nerve V synonym: "CN-V development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021559: 32.97 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0021560 using "CN VI development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(CN VI, anatomy)]) [-6] ! parse: GO:0021560 using "abducens nerve development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000310]) [-2] ! parse: GO:0021560 using "cranial nerve 6 development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(6, anatomy), OBO_REL:unfolds_in=MA:0000215]) [-3] ! parse: GO:0021560 using "cranial nerve 6 development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(6, anatomy), OBO_REL:unfolds_in=ZFA:0000641]) [-3] ! parse: GO:0021560 using "cranial nerve VI development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=FBbt:00000635, OBO_REL:unfolds_in=MA:0000215]) [-3] ! parse: GO:0021560 using "cranial nerve VI development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=FBbt:00000635, OBO_REL:unfolds_in=ZFA:0000641]) [-3] ! parse: GO:0021560 using "cranial nerve VI development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=FBbt:00000679, OBO_REL:unfolds_in=MA:0000215]) [-3] ! parse: GO:0021560 using "cranial nerve VI development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=FBbt:00000679, OBO_REL:unfolds_in=ZFA:0000641]) [-3] ! parse: GO:0021560 using "cranial nerve VI development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00000635, OBO_REL:unfolds_in=MA:0000215]) [-3] ! parse: GO:0021560 using "cranial nerve VI development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00000635, OBO_REL:unfolds_in=ZFA:0000641]) [-3] ! parse: GO:0021560 using "cranial nerve VI development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00000679, OBO_REL:unfolds_in=MA:0000215]) [-3] ! parse: GO:0021560 using "cranial nerve VI development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00000679, OBO_REL:unfolds_in=ZFA:0000641]) [-3] ! parse: GO:0021560 using "cranial nerve VI development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000310]) [-2] ! parse: GO:0021560 using "cranial nerve VI development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(FBbt:00000635, [OBO_REL:part_of=MA:0000215])]) [-3] ! parse: GO:0021560 using "cranial nerve VI development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(FBbt:00000635, [OBO_REL:part_of=ZFA:0000641])]) [-3] ! parse: GO:0021560 using "cranial nerve VI development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(FBbt:00000679, [OBO_REL:part_of=MA:0000215])]) [-3] ! parse: GO:0021560 using "cranial nerve VI development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(FBbt:00000679, [OBO_REL:part_of=ZFA:0000641])]) [-3] ! no existing xp def ! def: "The process whose specific outcome is the progression of the abducens nerve over time, from its formation to the mature structure. The motor function of the abducens nerve is to contract the lateral rectus which results in abduction of the eye." ! PROPOSED: developmental process that results_in_complete_developmental_of cranial nerve VI [cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000310])] [Term] id: GO:0021560 ! abducens nerve development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of ZFA:0000310 ! cranial nerve VI synonym: "CN-VI development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021560: 33.22 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0021561 using "CN VII development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(CN VII, anatomy)]) [-7] ! parse: GO:0021561 using "cranial nerve 7 development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(7, anatomy), OBO_REL:unfolds_in=MA:0000215]) [-3] ! parse: GO:0021561 using "cranial nerve 7 development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(7, anatomy), OBO_REL:unfolds_in=ZFA:0000641]) [-3] ! parse: GO:0021561 using "cranial nerve VII development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000664]) [-2] ! parse: GO:0021561 using "cranial nerve VII development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(VII, anatomy), OBO_REL:unfolds_in=MA:0000215]) [-5] ! parse: GO:0021561 using "cranial nerve VII development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(VII, anatomy), OBO_REL:unfolds_in=ZFA:0000641]) [-5] ! parse: GO:0021561 using "facial nerve development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000664]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the facial nerve over time, from its formation to the mature structure. This sensory and motor nerve supplies the muscles of facial expression and the expression and taste at the anterior two-thirds of the tongue. The principal branches are the superficial opthalmic, buccal, palatine and hyomandibular. The main trunk synapses within pterygopalatine ganglion in the parotid gland and this ganglion then gives off nerve branches which supply the lacrimal gland and the mucous secreting glands of the nasal and oral cavities." ! PROPOSED: developmental process that results_in_complete_developmental_of cranial nerve VII [cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000664])] [Term] id: GO:0021561 ! facial nerve development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of ZFA:0000664 ! cranial nerve VII synonym: "CN-VII development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021561: 27.97 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0021562 using "CN VIII development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(CN VIII, anatomy)]) [-8] ! parse: GO:0021562 using "acoustic nerve development" => cdef(GO:0021675, [OBO_REL:results_in_developmental_progression_of=anon(acoustic, anatomy)]) [-9] ! parse: GO:0021562 using "acoustic nerve development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(acoustic nerve, anatomy)]) [-15] ! parse: GO:0021562 using "cranial nerve 8 development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(8, anatomy), OBO_REL:unfolds_in=MA:0000215]) [-3] ! parse: GO:0021562 using "cranial nerve 8 development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(8, anatomy), OBO_REL:unfolds_in=ZFA:0000641]) [-3] ! parse: GO:0021562 using "cranial nerve VIII development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000247]) [-2] ! parse: GO:0021562 using "cranial nerve VIII development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(VIII, anatomy), OBO_REL:unfolds_in=MA:0000215]) [-6] ! parse: GO:0021562 using "cranial nerve VIII development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(VIII, anatomy), OBO_REL:unfolds_in=ZFA:0000641]) [-6] ! parse: GO:0021562 using "vestibulocochlear nerve development" => cdef(GO:0021675, [OBO_REL:results_in_developmental_progression_of=anon(vestibulocochlear, anatomy)]) [-18] ! parse: GO:0021562 using "vestibulocochlear nerve development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(vestibulocochlear nerve, anatomy)]) [-24] ! no existing xp def ! def: "The process whose specific outcome is the progression of the vestibulocochlear nerve over time, from its formation to the mature structure. This sensory nerve innervates the membranous labyrinth of the inner ear. The vestibular branch innervates the vestibular apparatus that senses head position changes relative to gravity. The auditory branch innervates the cochlear duct, which is connected to the three bony ossicles which transduce sound waves into fluid movement in the cochlea." ! PROPOSED: developmental process that results_in_complete_developmental_of cranial nerve VIII [cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000247])] [Term] id: GO:0021562 ! vestibulocochlear nerve development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of ZFA:0000247 ! cranial nerve VIII synonym: "CN-VIII development" EXACT [OBOL:automatic] synonym: "auditory nerve development" EXACT [OBOL:automatic] synonym: "octaval nerve development" EXACT [OBOL:automatic] synonym: "statoacoustic nerve development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021562: 32.06 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0021563 using "CN IX development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(CN IX, anatomy)]) [-6] ! parse: GO:0021563 using "cranial nerve 9 development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(9, anatomy), OBO_REL:unfolds_in=MA:0000215]) [-3] ! parse: GO:0021563 using "cranial nerve 9 development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(9, anatomy), OBO_REL:unfolds_in=ZFA:0000641]) [-3] ! parse: GO:0021563 using "cranial nerve IX development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000668]) [-2] ! parse: GO:0021563 using "cranial nerve IX development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(IX, anatomy), OBO_REL:unfolds_in=MA:0000215]) [-4] ! parse: GO:0021563 using "cranial nerve IX development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(IX, anatomy), OBO_REL:unfolds_in=ZFA:0000641]) [-4] ! parse: GO:0021563 using "glossopharyngeal nerve development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000668]) [-2] ! no existing xp def ! def: "Various sensory and motor branches of the glossopharyngeal nerve supply nerve connections to the pharynx and back of the tongue. The branchial motor component contains motor fibers that innervate muscles that elevate the pharynx and larynx, and the tympanic branch supplies parasympathetic fibers to the otic ganglion." ! PROPOSED: developmental process that results_in_complete_developmental_of cranial nerve IX [cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000668])] [Term] id: GO:0021563 ! glossopharyngeal nerve development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of ZFA:0000668 ! cranial nerve IX synonym: "CN-IX development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021563: 27.97 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0021564 using "CN X development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(CN X, anatomy)]) [-5] ! parse: GO:0021564 using "cranial nerve 10 development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(1 0, anatomy), OBO_REL:unfolds_in=MA:0000215]) [-5] ! parse: GO:0021564 using "cranial nerve 10 development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(1 0, anatomy), OBO_REL:unfolds_in=ZFA:0000641]) [-5] ! parse: GO:0021564 using "cranial nerve X development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000453]) [-2] ! parse: GO:0021564 using "cranial nerve X development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(X, anatomy), OBO_REL:unfolds_in=MA:0000215]) [-3] ! parse: GO:0021564 using "cranial nerve X development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(X, anatomy), OBO_REL:unfolds_in=ZFA:0000641]) [-3] ! parse: GO:0021564 using "vagus nerve development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000453]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the vagus nerve over time, from its formation to the mature structure. This nerve is primarily sensory but also has visceromotor components. It originates in the brain stem and controls many autonomic functions of the heart, lungs, stomach, pharynx, larynx, trachea, esophagus and other gastrointestinal tract components. It controls some motor functions such as speech. The sensory branches mediate sensation from the pharynx, larynx, thorax and abdomen; it also innervates taste buds in the epiglottis." ! PROPOSED: developmental process that results_in_complete_developmental_of cranial nerve X [cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000453])] [Term] id: GO:0021564 ! vagus nerve development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of ZFA:0000453 ! cranial nerve X synonym: "CN-X development" EXACT [OBOL:automatic] synonym: "vagal nerve development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021564: 27.98 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0021565 using "CN XI development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(CN XI, anatomy)]) [-6] ! parse: GO:0021565 using "accessory nerve development" => cdef(GO:0021675, [OBO_REL:results_in_developmental_progression_of=anon(accessory, anatomy)]) [-10] ! parse: GO:0021565 using "accessory nerve development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(accessory nerve, anatomy)]) [-16] ! parse: GO:0021565 using "cranial nerve 11 development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(1 1, anatomy), OBO_REL:unfolds_in=MA:0000215]) [-5] ! parse: GO:0021565 using "cranial nerve 11 development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(1 1, anatomy), OBO_REL:unfolds_in=ZFA:0000641]) [-5] ! parse: GO:0021565 using "cranial nerve XI development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(XI, anatomy), OBO_REL:unfolds_in=MA:0000215]) [-4] ! parse: GO:0021565 using "cranial nerve XI development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(XI, anatomy), OBO_REL:unfolds_in=ZFA:0000641]) [-4] ! parse: GO:0021565 using "spinal accessory nerve development" => cdef(GO:0021675, [OBO_REL:results_in_developmental_progression_of=anon(spinal accessory, anatomy)]) [-17] ! parse: GO:0021565 using "spinal accessory nerve development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(spinal accessory nerve, anatomy)]) [-23] ! no existing xp def ! def: "The process whose specific outcome is the progression of the accessory nerve over time, from its formation to the mature structure. In mice, the spinal branch of this motor nerve innervates the trapezius and the sternocleidomastoid muscles. The cranial branch joins the vagus nerve and innervates the same targets as the vagus nerve." ! PROPOSED: developmental process that results_in_complete_developmental_of anon(XI, anatomy) and OBO_REL:unfolds_in cranial nerve [cdef(GO:0032502, [results_in_complete_developmental_of=anon(XI, anatomy), OBO_REL:unfolds_in=ZFA:0000641])] [Term] id: GO:0021565 ! accessory nerve development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of anatomy:XI intersection_of: OBO_REL:unfolds_in ZFA:0000641 ! cranial nerve synonym: "cranial nerves XI development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021565: 31.61 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0021566 using "CN XII development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(CN XII, anatomy)]) [-7] ! parse: GO:0021566 using "cranial nerve 12 development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(1 2, anatomy), OBO_REL:unfolds_in=MA:0000215]) [-5] ! parse: GO:0021566 using "cranial nerve 12 development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(1 2, anatomy), OBO_REL:unfolds_in=ZFA:0000641]) [-5] ! parse: GO:0021566 using "cranial nerve XII development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(XII, anatomy), OBO_REL:unfolds_in=MA:0000215]) [-5] ! parse: GO:0021566 using "cranial nerve XII development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(XII, anatomy), OBO_REL:unfolds_in=ZFA:0000641]) [-5] ! parse: GO:0021566 using "hypoglossal nerve development" => cdef(GO:0021675, [OBO_REL:results_in_developmental_progression_of=anon(hypoglossal, anatomy)]) [-12] ! parse: GO:0021566 using "hypoglossal nerve development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(hypoglossal nerve, anatomy)]) [-18] ! no existing xp def ! def: "The process whose specific outcome is the progression of the hypoglossal nerve over time, from its formation to the mature structure. This motor nerve innervates all the intrinsic and all but one of the extrinsic muscles of the tongue." ! PROPOSED: developmental process that results_in_complete_developmental_of anon(XII, anatomy) and OBO_REL:unfolds_in cranial nerve [cdef(GO:0032502, [results_in_complete_developmental_of=anon(XII, anatomy), OBO_REL:unfolds_in=ZFA:0000641])] [Term] id: GO:0021566 ! hypoglossal nerve development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of anatomy:XII intersection_of: OBO_REL:unfolds_in ZFA:0000641 ! cranial nerve synonym: "cranial nerves XII development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021566: 27.02 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0021567 using "rhombomere 1 development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0001031]) [-2] ! parse: GO:0021567 using "rhombomere 1 development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(1, anatomy), OBO_REL:unfolds_in=ZFA:0001064]) [-3] ! no existing xp def ! def: "The process whose specific outcome is the progression of rhombomere 1 over time, from its formation to the mature structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order." ! PROPOSED: developmental process that results_in_complete_developmental_of rhombomere 1 [cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0001031])] [Term] id: GO:0021567 ! rhombomere 1 development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of ZFA:0001031 ! rhombomere 1 synonym: "r 1 development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021567: 5.31 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0021568 using "rhombomere 2 development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000822]) [-2] ! parse: GO:0021568 using "rhombomere 2 development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(2, anatomy), OBO_REL:unfolds_in=ZFA:0001064]) [-3] ! no existing xp def ! def: "The process whose specific outcome is the progression of rhombomere 2 over time, from its formation to the mature structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order." ! PROPOSED: developmental process that results_in_complete_developmental_of rhombomere 2 [cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000822])] [Term] id: GO:0021568 ! rhombomere 2 development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of ZFA:0000822 ! rhombomere 2 synonym: "r 2 development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021568: 5.32 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0021569 using "rhombomere 3 development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000948]) [-2] ! parse: GO:0021569 using "rhombomere 3 development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(3, anatomy), OBO_REL:unfolds_in=ZFA:0001064]) [-3] ! no existing xp def ! def: "The process whose specific outcome is the progression of rhombomere 3 over time, from its formation to the mature structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order." ! PROPOSED: developmental process that results_in_complete_developmental_of rhombomere 3 [cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000948])] [Term] id: GO:0021569 ! rhombomere 3 development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of ZFA:0000948 ! rhombomere 3 synonym: "r 3 development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021569: 5.34 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0021570 using "rhombomere 4 development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0001032]) [-2] ! parse: GO:0021570 using "rhombomere 4 development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(4, anatomy), OBO_REL:unfolds_in=ZFA:0001064]) [-3] ! no existing xp def ! def: "The process whose specific outcome is the progression of rhombomere 4 over time, from its formation to the mature structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order." ! PROPOSED: developmental process that results_in_complete_developmental_of rhombomere 4 [cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0001032])] [Term] id: GO:0021570 ! rhombomere 4 development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of ZFA:0001032 ! rhombomere 4 synonym: "r 4 development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021570: 5.32 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0021571 using "rhombomere 5 development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000823]) [-2] ! parse: GO:0021571 using "rhombomere 5 development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(5, anatomy), OBO_REL:unfolds_in=ZFA:0001064]) [-3] ! no existing xp def ! def: "The process whose specific outcome is the progression of rhombomere 5 over time, from its formation to the mature structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order." ! PROPOSED: developmental process that results_in_complete_developmental_of rhombomere 5 [cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000823])] [Term] id: GO:0021571 ! rhombomere 5 development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of ZFA:0000823 ! rhombomere 5 synonym: "r 5 development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021571: 5.31 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0021572 using "rhombomere 6 development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000069]) [-2] ! parse: GO:0021572 using "rhombomere 6 development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(6, anatomy), OBO_REL:unfolds_in=ZFA:0001064]) [-3] ! no existing xp def ! def: "The process whose specific outcome is the progression of rhombomere 6 over time, from its formation to the mature structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order." ! PROPOSED: developmental process that results_in_complete_developmental_of rhombomere 6 [cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000069])] [Term] id: GO:0021572 ! rhombomere 6 development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of ZFA:0000069 ! rhombomere 6 synonym: "r 6 development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021572: 5.31 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0021573 using "rhombomere 7 development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000949]) [-2] ! parse: GO:0021573 using "rhombomere 7 development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(7, anatomy), OBO_REL:unfolds_in=ZFA:0001064]) [-3] ! no existing xp def ! def: "The process whose specific outcome is the progression of rhombomere 7 over time, from its formation to the mature structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order." ! PROPOSED: developmental process that results_in_complete_developmental_of rhombomere 7 [cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000949])] [Term] id: GO:0021573 ! rhombomere 7 development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of ZFA:0000949 ! rhombomere 7 synonym: "r 7 development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021573: 5.31 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0021574 using "rhombomere 8 development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000153]) [-2] ! parse: GO:0021574 using "rhombomere 8 development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(8, anatomy), OBO_REL:unfolds_in=ZFA:0001064]) [-3] ! no existing xp def ! def: "The process whose specific outcome is the progression of rhombomere 8 over time, from its formation to the mature structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order." ! PROPOSED: developmental process that results_in_complete_developmental_of rhombomere 8 [cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000153])] [Term] id: GO:0021574 ! rhombomere 8 development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of ZFA:0000153 ! rhombomere 8 synonym: "r 8 development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021574: 5.32 ! parse: GO:0021575 using "hindbrain morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000195]) [-2] ! parse: GO:0021575 using "hindbrain morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0000029]) [-2] ! parse: GO:0021575 using "rhombencephalon morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000195]) [-2] ! parse: GO:0021575 using "rhombencephalon morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0000029]) [-2] ! no existing xp def ! def: "The process by which the anatomical structure of the hindbrain is generated and organized. Morphogenesis pertains to the creation of form. The hindbrain is the region consisting of the medulla, pons and cerebellum. Areas of the hindbrain control motor and autonomic functions." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of hindbrain [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0000029])] [Term] id: GO:0021575 ! hindbrain morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0000029 ! hindbrain synonym: "rhombencephalon anatomical structure morphogenesis" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021575: 12.29 ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0021576 using "hindbrain formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=MA:0000195]) [-2] ! parse: GO:0021576 using "hindbrain formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=ZFA:0000029]) [-2] ! parse: GO:0021576 using "hindbrain formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=MA:0000195]) [-2] ! parse: GO:0021576 using "hindbrain formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0000029]) [-2] ! no existing xp def ! def: "The process that gives rise to the hindbrain. This process pertains to the initial formation of a structure from unspecified parts. The hindbrain is the region consisting of the medulla, pons and cerebellum. Areas of the hindbrain control motor and autonomic functions." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of hindbrain [cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0000029])] [Term] id: GO:0021576 ! hindbrain formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of ZFA:0000029 ! hindbrain synonym: "rhombencephalon anatomical structure formation" EXACT [OBOL:automatic] synonym: "rhombencephalon formation" EXACT [OBOL:automatic] synonym: "rhombencephalon formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021576: 6.23 ! parse: GO:0021577 using "hindbrain structural organization" => cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=MA:0000195]) [-2] ! parse: GO:0021577 using "hindbrain structural organization" => cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=ZFA:0000029]) [-2] ! no existing xp def ! def: "The process that contributes to the act of creating the structural organization of the hindbrain. This process pertains to the physical shaping of a rudimentary structure. The hindbrain is the region consisting of the medulla, pons and cerebellum. Areas of the hindbrain control motor and autonomic functions." ! PROPOSED: organization of an anatomical structure that OBO_REL:results_in_developmental_progression_of hindbrain [cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=ZFA:0000029])] [Term] id: GO:0021577 ! hindbrain structural organization intersection_of: GO:0048532 ! organization of an anatomical structure intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0000029 ! hindbrain synonym: "rhombencephalon anatomical structure organization" EXACT [OBOL:automatic] synonym: "rhombencephalon organization of an anatomical structure" EXACT [OBOL:automatic] synonym: "rhombencephalon structural organization" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021577: 6.18 ! parse: GO:0021578 using "hindbrain maturation" => cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=MA:0000195]) [-2] ! parse: GO:0021578 using "hindbrain maturation" => cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=ZFA:0000029]) [-2] ! no existing xp def ! def: "A developmental process, independent of morphogenetic (shape) change, that is required for the hindbrain to attain its fully functional state. The hindbrain is the region consisting of the medulla, pons and cerebellum. Areas of the hindbrain control motor and autonomic functions." ! PROPOSED: developmental maturation that OBO_REL:results_in_developmental_progression_of hindbrain [cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=ZFA:0000029])] [Term] id: GO:0021578 ! hindbrain maturation intersection_of: GO:0021700 ! developmental maturation intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0000029 ! hindbrain synonym: "rhombencephalon developmental maturation" EXACT [OBOL:automatic] synonym: "rhombencephalon maturation" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021578: 5.36 ! parse: GO:0021579 using "medulla morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00003748]) [-2] ! parse: GO:0021579 using "medulla oblongata morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000206]) [-2] ! parse: GO:0021579 using "medulla oblongata morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0000545]) [-2] ! parse: GO:0021579 using "medulla oblongata morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(oblongata, anatomy), OBO_REL:unfolds_in=FBbt:00003748]) [-11] ! parse: GO:0021579 using "myelencephalon morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000205]) [-2] ! no existing xp def ! def: "The process by which the anatomical structure of the medulla oblongata is generated and organized. Morphogenesis pertains to the creation of form. The medulla oblongata lies directly above the spinal cord and controls vital autonomic functions such as digestion, breathing and the control of heart rate." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of medulla oblongata [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0000545])] [Term] id: GO:0021579 ! medulla oblongata morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0000545 ! medulla oblongata ! seconds spent parsing GO:0021579: 20.86 ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0021580 using "medulla biosynthesis" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=FBbt:00003748]) [-2] ! parse: GO:0021580 using "medulla formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=FBbt:00003748]) [-2] ! parse: GO:0021580 using "medulla formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=FBbt:00003748]) [-2] ! parse: GO:0021580 using "medulla oblongata formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=MA:0000206]) [-2] ! parse: GO:0021580 using "medulla oblongata formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=ZFA:0000545]) [-2] ! parse: GO:0021580 using "medulla oblongata formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=MA:0000206]) [-2] ! parse: GO:0021580 using "medulla oblongata formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0000545]) [-2] ! parse: GO:0021580 using "medulla oblongata formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(oblongata, anatomy), OBO_REL:unfolds_in=FBbt:00003748]) [-11] ! parse: GO:0021580 using "myelencephalon biosynthesis" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=MA:0000205]) [-2] ! parse: GO:0021580 using "myelencephalon formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=MA:0000205]) [-2] ! parse: GO:0021580 using "myelencephalon formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=MA:0000205]) [-2] ! no existing xp def ! def: "The process that gives rise to the medulla oblongata. This process pertains to the initial formation of a structure from unspecified parts. The medulla oblongata lies directly above the spinal cord and controls vital autonomic functions such as digestion, breathing and the control of heart rate." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of medulla oblongata [cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0000545])] [Term] id: GO:0021580 ! medulla oblongata formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of ZFA:0000545 ! medulla oblongata ! seconds spent parsing GO:0021580: 31.28 ! parse: GO:0021581 using "medulla oblongata structural organization" => cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=MA:0000206]) [-2] ! parse: GO:0021581 using "medulla oblongata structural organization" => cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=ZFA:0000545]) [-2] ! parse: GO:0021581 using "medulla oblongata structural organization" => cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=anon(oblongata, anatomy), OBO_REL:unfolds_in=FBbt:00003748]) [-11] ! no existing xp def ! def: "The process that contributes to the act of creating the structural organization of the medulla oblongata. This process pertains to the physical shaping of a rudimentary structure. The medulla oblongata lies directly above the spinal cord and controls vital autonomic functions such as digestion, breathing and the control of heart rate." ! PROPOSED: organization of an anatomical structure that OBO_REL:results_in_developmental_progression_of medulla oblongata [cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=ZFA:0000545])] [Term] id: GO:0021581 ! medulla oblongata structural organization intersection_of: GO:0048532 ! organization of an anatomical structure intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0000545 ! medulla oblongata ! seconds spent parsing GO:0021581: 23.82 ! parse: GO:0021582 using "medulla maturation" => cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=FBbt:00003748]) [-2] ! parse: GO:0021582 using "medulla oblongata maturation" => cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=MA:0000206]) [-2] ! parse: GO:0021582 using "medulla oblongata maturation" => cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=ZFA:0000545]) [-2] ! parse: GO:0021582 using "myelencephalon maturation" => cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=MA:0000205]) [-2] ! no existing xp def ! def: "A developmental process, independent of morphogenetic (shape) change, that is required for the medulla oblongata to attain its fully functional state. The medulla oblongata lies directly above the spinal cord and controls vital autonomic functions such as digestion, breathing and the control of heart rate." ! PROPOSED: developmental maturation that OBO_REL:results_in_developmental_progression_of medulla oblongata [cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=ZFA:0000545])] [Term] id: GO:0021582 ! medulla oblongata maturation intersection_of: GO:0021700 ! developmental maturation intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0000545 ! medulla oblongata ! seconds spent parsing GO:0021582: 19.07 ! parse: GO:0021587 using "cerebellum morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000198]) [-2] ! parse: GO:0021587 using "cerebellum morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0000100]) [-2] ! no existing xp def ! def: "The process by which the anatomical structure of the cerebellum is generated and organized. Morphogenesis pertains to the creation of form. The cerebellum is the portion of the brain in the back of the head between the cerebrum and the pons. The cerebellum controls balance for walking and standing, modulates the force and range of movement and is involved in the learning of motor skills." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of cerebellum [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0000100])] [Term] id: GO:0021587 ! cerebellum morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0000100 ! cerebellum ! seconds spent parsing GO:0021587: 6.15 ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0021588 using "cerebellum formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=MA:0000198]) [-2] ! parse: GO:0021588 using "cerebellum formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=ZFA:0000100]) [-2] ! parse: GO:0021588 using "cerebellum formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=MA:0000198]) [-2] ! parse: GO:0021588 using "cerebellum formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0000100]) [-2] ! no existing xp def ! def: "The process that gives rise to the cerebellum. This process pertains to the initial formation of a structure from unspecified parts. The cerebellum is the portion of the brain in the back of the head between the cerebrum and the pons. The cerebellum controls balance for walking and standing, modulates the force and range of movement and is involved in the learning of motor skills." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of cerebellum [cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0000100])] [Term] id: GO:0021588 ! cerebellum formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of ZFA:0000100 ! cerebellum ! seconds spent parsing GO:0021588: 6.24 ! parse: GO:0021589 using "cerebellum structural organization" => cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=MA:0000198]) [-2] ! parse: GO:0021589 using "cerebellum structural organization" => cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=ZFA:0000100]) [-2] ! no existing xp def ! def: "The process that contributes to the act of creating the structural organization of the cerebellum. This process pertains to the physical shaping of a rudimentary structure. The cerebellum is the portion of the brain in the back of the head between the cerebrum and the pons. The cerebellum controls balance for walking and standing, modulates the force and range of movement and is involved in the learning of motor skills." ! PROPOSED: organization of an anatomical structure that OBO_REL:results_in_developmental_progression_of cerebellum [cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=ZFA:0000100])] [Term] id: GO:0021589 ! cerebellum structural organization intersection_of: GO:0048532 ! organization of an anatomical structure intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0000100 ! cerebellum ! seconds spent parsing GO:0021589: 6.17 ! parse: GO:0021590 using "cerebellum maturation" => cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=MA:0000198]) [-2] ! parse: GO:0021590 using "cerebellum maturation" => cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=ZFA:0000100]) [-2] ! no existing xp def ! def: "A developmental process, independent of morphogenetic (shape) change, that is required for the cerebellum to attain its fully functional state. The cerebellum is the portion of the brain in the back of the head between the cerebrum and the pons. The cerebellum controls balance for walking and standing, modulates the force and range of movement and is involved in the learning of motor skills." ! PROPOSED: developmental maturation that OBO_REL:results_in_developmental_progression_of cerebellum [cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=ZFA:0000100])] [Term] id: GO:0021590 ! cerebellum maturation intersection_of: GO:0021700 ! developmental maturation intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0000100 ! cerebellum ! seconds spent parsing GO:0021590: 5.35 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0021591 using "ventricular system development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0001261]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the brain ventricular system over time, from its formation to the mature structure. The brain ventricular system consists of four communicating cavities within the brain that are continuous with the central canal of the spinal cord. These cavities include two lateral ventricles, the third ventricle and the fourth ventricle. Cerebrospinal fluid fills the ventricles and is produced by the choroid plexus." ! PROPOSED: developmental process that results_in_complete_developmental_of ventricular system [cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0001261])] [Term] id: GO:0021591 ! ventricular system development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of ZFA:0001261 ! ventricular system ! seconds spent parsing GO:0021591: 4.71 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0021592 using "fourth ventricle development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000196]) [-2] ! parse: GO:0021592 using "fourth ventricle development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000110]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the fourth ventricle over time, from its formation to the mature structure. The fourth ventricle is an irregularly shaped cavity in the rhombencephalon, between the medulla oblongata, the pons, and the isthmus in front, and the cerebellum behind. It is continuous with the central canal of the cord below and with the cerebral aqueduct above, and through its lateral and median apertures it communicates with the subarachnoid space." ! PROPOSED: developmental process that results_in_complete_developmental_of fourth ventricle [cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000110])] [Term] id: GO:0021592 ! fourth ventricle development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of ZFA:0000110 ! fourth ventricle synonym: "4 th ventricle development" EXACT [OBOL:automatic] synonym: "hindbrain ventricle development" EXACT [OBOL:automatic] synonym: "rhombencephalic ventricle development" EXACT [OBOL:automatic] synonym: "rhombencephalic vesicle development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021592: 5.37 ! parse: GO:0021593 using "rhombomere morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0001064]) [-2] ! no existing xp def ! def: "The process by which the anatomical structure of the rhombomere is generated and organized. Morphogenesis pertains to the creation of form. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of rhombomere [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0001064])] [Term] id: GO:0021593 ! rhombomere morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0001064 ! rhombomere synonym: "hindbrain segment anatomical structure morphogenesis" EXACT [OBOL:automatic] synonym: "hindbrain segment morphogenesis" EXACT [OBOL:automatic] synonym: "neuromeres anatomical structure morphogenesis" EXACT [OBOL:automatic] synonym: "neuromeres morphogenesis" EXACT [OBOL:automatic] synonym: "rhombomeres anatomical structure morphogenesis" EXACT [OBOL:automatic] synonym: "rhombomeres morphogenesis" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021593: 5.1 ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0021594 using "rhombomere formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=ZFA:0001064]) [-2] ! parse: GO:0021594 using "rhombomere formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0001064]) [-2] ! no existing xp def ! def: "The process that gives rise to the rhombomere. This process pertains to the initial formation of a structure from unspecified parts. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of rhombomere [cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0001064])] [Term] id: GO:0021594 ! rhombomere formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of ZFA:0001064 ! rhombomere synonym: "hindbrain segment anatomical structure formation" EXACT [OBOL:automatic] synonym: "hindbrain segment formation" EXACT [OBOL:automatic] synonym: "hindbrain segment formation of an anatomical structure" EXACT [OBOL:automatic] synonym: "neuromeres anatomical structure formation" EXACT [OBOL:automatic] synonym: "neuromeres formation" EXACT [OBOL:automatic] synonym: "neuromeres formation of an anatomical structure" EXACT [OBOL:automatic] synonym: "rhombomeres anatomical structure formation" EXACT [OBOL:automatic] synonym: "rhombomeres formation" EXACT [OBOL:automatic] synonym: "rhombomeres formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021594: 5.15 ! parse: GO:0021595 using "rhombomere structural organization" => cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=ZFA:0001064]) [-2] ! no existing xp def ! def: "The process that contributes to the act of creating the structural organization of the rhombomere structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates." ! PROPOSED: organization of an anatomical structure that OBO_REL:results_in_developmental_progression_of rhombomere [cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=ZFA:0001064])] [Term] id: GO:0021595 ! rhombomere structural organization intersection_of: GO:0048532 ! organization of an anatomical structure intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0001064 ! rhombomere synonym: "hindbrain segment anatomical structure organization" EXACT [OBOL:automatic] synonym: "hindbrain segment organization of an anatomical structure" EXACT [OBOL:automatic] synonym: "hindbrain segment structural organization" EXACT [OBOL:automatic] synonym: "neuromeres anatomical structure organization" EXACT [OBOL:automatic] synonym: "neuromeres organization of an anatomical structure" EXACT [OBOL:automatic] synonym: "neuromeres structural organization" EXACT [OBOL:automatic] synonym: "rhombomeres anatomical structure organization" EXACT [OBOL:automatic] synonym: "rhombomeres organization of an anatomical structure" EXACT [OBOL:automatic] synonym: "rhombomeres structural organization" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021595: 5.1 ! parse: GO:0021597 using "central nervous system structural organization" => cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=FBbt:00005094]) [-2] ! parse: GO:0021597 using "central nervous system structural organization" => cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=MA:0000167]) [-2] ! parse: GO:0021597 using "central nervous system structural organization" => cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=ZFA:0000012]) [-2] ! no existing xp def ! def: "The process that contributes to the act of creating the structural organization of the central nervous system structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord." ! PROPOSED: organization of an anatomical structure that OBO_REL:results_in_developmental_progression_of central nervous system [cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=ZFA:0000012])] [Term] id: GO:0021597 ! central nervous system structural organization intersection_of: GO:0048532 ! organization of an anatomical structure intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0000012 ! central nervous system synonym: "cns anatomical structure organization" EXACT [OBOL:automatic] synonym: "cns organization of an anatomical structure" EXACT [OBOL:automatic] synonym: "cns structural organization" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021597: 7.86 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0021598 using "CN VI development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(CN VI, anatomy)]) [-6] ! parse: GO:0021598 using "abducens nerve morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0000310]) [-2] ! no existing xp def ! def: "The process by which the anatomical structure of the abducens nerve is generated and organized. Morphogenesis pertains to the creation of form. The motor function of the abducens nerve is to contract the lateral rectus which results in abduction of the eye." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of cranial nerve VI [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0000310])] [Term] id: GO:0021598 ! abducens nerve morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0000310 ! cranial nerve VI synonym: "CN-VI anatomical structure morphogenesis" EXACT [OBOL:automatic] synonym: "CN-VI morphogenesis" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021598: 5.18 ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0021599 using "CN VI formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(CN VI, anatomy)]) [-6] ! parse: GO:0021599 using "abducens nerve formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=ZFA:0000310]) [-2] ! parse: GO:0021599 using "abducens nerve formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0000310]) [-2] ! no existing xp def ! def: "The process that gives rise to the abducens nerve. This process pertains to the initial formation of a structure from unspecified parts. The motor function of the abducens nerve is to contract the lateral rectus which results in abduction of the eye." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of cranial nerve VI [cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0000310])] [Term] id: GO:0021599 ! abducens nerve formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of ZFA:0000310 ! cranial nerve VI synonym: "CN-VI anatomical structure formation" EXACT [OBOL:automatic] synonym: "CN-VI formation" EXACT [OBOL:automatic] synonym: "CN-VI formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021599: 14.07 ! parse: GO:0021600 using "CN VI structural organization" => cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=anon(CN VI, anatomy)]) [-6] ! parse: GO:0021600 using "abducens nerve structural organization" => cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=ZFA:0000310]) [-2] ! no existing xp def ! def: "The process that contributes to the act of creating the structural organization of the abducens nerve. This process pertains to the physical shaping of a rudimentary structure. The motor function of the abducens nerve is to contract the lateral rectus which results in abduction of the eye." ! PROPOSED: organization of an anatomical structure that OBO_REL:results_in_developmental_progression_of cranial nerve VI [cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=ZFA:0000310])] [Term] id: GO:0021600 ! abducens nerve structural organization intersection_of: GO:0048532 ! organization of an anatomical structure intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0000310 ! cranial nerve VI synonym: "CN-VI anatomical structure organization" EXACT [OBOL:automatic] synonym: "CN-VI organization of an anatomical structure" EXACT [OBOL:automatic] synonym: "CN-VI structural organization" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021600: 9.65 ! parse: GO:0021601 using "abducens nerve maturation" => cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=ZFA:0000310]) [-2] ! no existing xp def ! def: "A developmental process, independent of morphogenetic (shape) change, that is required for the abducens nerve to attain its fully functional state. The motor function of the abducens nerve is to contract the lateral rectus which results in abduction of the eye." ! PROPOSED: developmental maturation that OBO_REL:results_in_developmental_progression_of cranial nerve VI [cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=ZFA:0000310])] [Term] id: GO:0021601 ! abducens nerve maturation intersection_of: GO:0021700 ! developmental maturation intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0000310 ! cranial nerve VI synonym: "CN-VI developmental maturation" EXACT [OBOL:automatic] synonym: "CN-VI maturation" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021601: 9.06 ! parse: GO:0021602 using "cranial nerve morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000215]) [-2] ! parse: GO:0021602 using "cranial nerve morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0000641]) [-2] ! no existing xp def ! def: "The process by which the anatomical structure of the cranial nerves are generated and organized. Morphogenesis pertains to the creation of form. The cranial nerves are composed of twelve pairs of nerves that emanate from the nervous tissue of the hindbrain. These nerves are sensory, motor, or mixed in nature, and provide the motor and general sensory innervation of the head, neck and viscera. They mediate vision, hearing, olfaction and taste and carry the parasympathetic innervation of the autonomic ganglia that control visceral functions." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of cranial nerve [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0000641])] [Term] id: GO:0021602 ! cranial nerve morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0000641 ! cranial nerve synonym: "cranial nerves anatomical structure morphogenesis" EXACT [OBOL:automatic] synonym: "cranial nerves morphogenesis" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021602: 6.22 ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0021603 using "cranial nerve formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=MA:0000215]) [-2] ! parse: GO:0021603 using "cranial nerve formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=ZFA:0000641]) [-2] ! parse: GO:0021603 using "cranial nerve formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=MA:0000215]) [-2] ! parse: GO:0021603 using "cranial nerve formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0000641]) [-2] ! no existing xp def ! def: "The process that gives rise to the cranial nerves. This process pertains to the initial formation of a structure from unspecified parts. The cranial nerves are composed of twelve pairs of nerves that emanate from the nervous tissue of the hindbrain. These nerves are sensory, motor, or mixed in nature, and provide the motor and general sensory innervation of the head, neck and viscera. They mediate vision, hearing, olfaction and taste and carry the parasympathetic innervation of the autonomic ganglia that control visceral functions." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of cranial nerve [cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0000641])] [Term] id: GO:0021603 ! cranial nerve formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of ZFA:0000641 ! cranial nerve synonym: "cranial nerves anatomical structure formation" EXACT [OBOL:automatic] synonym: "cranial nerves formation" EXACT [OBOL:automatic] synonym: "cranial nerves formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021603: 6.31 ! parse: GO:0021604 using "cranial nerve structural organization" => cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=MA:0000215]) [-2] ! parse: GO:0021604 using "cranial nerve structural organization" => cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=ZFA:0000641]) [-2] ! no existing xp def ! def: "The process that contributes to the act of creating the structural organization of the cranial nerves. This process pertains to the physical shaping of a rudimentary structure. The cranial nerves are composed of twelve pairs of nerves that emanate from the nervous tissue of the hindbrain. These nerves are sensory, motor, or mixed in nature, and provide the motor and general sensory innervation of the head, neck and viscera. They mediate vision, hearing, olfaction and taste and carry the parasympathetic innervation of the autonomic ganglia that control visceral functions." ! PROPOSED: organization of an anatomical structure that OBO_REL:results_in_developmental_progression_of cranial nerve [cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=ZFA:0000641])] [Term] id: GO:0021604 ! cranial nerve structural organization intersection_of: GO:0048532 ! organization of an anatomical structure intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0000641 ! cranial nerve synonym: "cranial nerves anatomical structure organization" EXACT [OBOL:automatic] synonym: "cranial nerves organization of an anatomical structure" EXACT [OBOL:automatic] synonym: "cranial nerves structural organization" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021604: 6.24 ! parse: GO:0021605 using "cranial nerve maturation" => cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=MA:0000215]) [-2] ! parse: GO:0021605 using "cranial nerve maturation" => cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=ZFA:0000641]) [-2] ! no existing xp def ! def: "A developmental process, independent of morphogenetic (shape) change, that is required for a cranial nerve to attain its fully functional state. The cranial nerves are composed of twelve pairs of nerves that emanate from the nervous tissue of the hindbrain. These nerves are sensory, motor, or mixed in nature, and provide the motor and general sensory innervation of the head, neck and viscera. They mediate vision, hearing, olfaction and taste and carry the parasympathetic innervation of the autonomic ganglia that control visceral functions." ! PROPOSED: developmental maturation that OBO_REL:results_in_developmental_progression_of cranial nerve [cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=ZFA:0000641])] [Term] id: GO:0021605 ! cranial nerve maturation intersection_of: GO:0021700 ! developmental maturation intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0000641 ! cranial nerve synonym: "cranial nerves developmental maturation" EXACT [OBOL:automatic] synonym: "cranial nerves maturation" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021605: 5.44 ! parse: GO:0021610 using "CN VII morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(CN VII, anatomy)]) [-7] ! parse: GO:0021610 using "facial nerve morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0000664]) [-2] ! no existing xp def ! def: "The process by which the anatomical structure of the facial nerve is generated and organized. Morphogenesis pertains to the creation of form. This sensory and motor nerve supplies the muscles of facial expression and the expression and taste at the anterior two-thirds of the tongue. The principal branches are the superficial opthalmic, buccal, palatine and hyomandibular. The main trunk synapses within pterygopalatine ganglion in the parotid gland and this ganglion then gives of nerve branches which supply the lacrimal gland and the mucous secreting glands of the nasal and oral cavities." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of cranial nerve VII [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0000664])] [Term] id: GO:0021610 ! facial nerve morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0000664 ! cranial nerve VII synonym: "CN-VII anatomical structure morphogenesis" EXACT [OBOL:automatic] synonym: "CN-VII morphogenesis" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021610: 9.36 ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0021611 using "CN VII formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(CN VII, anatomy)]) [-7] ! parse: GO:0021611 using "facial nerve formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=ZFA:0000664]) [-2] ! parse: GO:0021611 using "facial nerve formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0000664]) [-2] ! no existing xp def ! def: "The process that gives rise to the facial nerve. This process pertains to the initial formation of a structure from unspecified parts. This sensory and motor nerve supplies the muscles of facial expression and the expression and taste at the anterior two-thirds of the tongue. The principal branches are the superficial opthalmic, buccal, palatine and hyomandibular. The main trunk synapses within pterygopalatine ganglion in the parotid gland and this ganglion then gives of nerve branches which supply the lacrimal gland and the mucous secreting glands of the nasal and oral cavities." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of cranial nerve VII [cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0000664])] [Term] id: GO:0021611 ! facial nerve formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of ZFA:0000664 ! cranial nerve VII synonym: "CN-VII anatomical structure formation" EXACT [OBOL:automatic] synonym: "CN-VII formation" EXACT [OBOL:automatic] synonym: "CN-VII formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021611: 13.92 ! parse: GO:0021612 using "CN VII structural organization" => cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=anon(CN VII, anatomy)]) [-7] ! parse: GO:0021612 using "facial nerve structural organization" => cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=ZFA:0000664]) [-2] ! no existing xp def ! def: "The process that contributes to the act of creating the structural organization of the facial nerve. This process pertains to the physical shaping of a rudimentary structure. This sensory and motor nerve supplies the muscles of facial expression and the expression and taste at the anterior two-thirds of the tongue. The principal branches are the superficial opthalmic, buccal, palatine and hyomandibular. The main trunk synapses within pterygopalatine ganglion in the parotid gland and this ganglion then gives of nerve branches which supply the lacrimal gland and the mucous secreting glands of the nasal and oral cavities." ! PROPOSED: organization of an anatomical structure that OBO_REL:results_in_developmental_progression_of cranial nerve VII [cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=ZFA:0000664])] [Term] id: GO:0021612 ! facial nerve structural organization intersection_of: GO:0048532 ! organization of an anatomical structure intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0000664 ! cranial nerve VII synonym: "CN-VII anatomical structure organization" EXACT [OBOL:automatic] synonym: "CN-VII organization of an anatomical structure" EXACT [OBOL:automatic] synonym: "CN-VII structural organization" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021612: 9.68 ! parse: GO:0021613 using "facial nerve maturation" => cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=ZFA:0000664]) [-2] ! no existing xp def ! def: "A developmental process, independent of morphogenetic (shape) change, that is required for the facial nerve to attain its fully functional state. This sensory and motor nerve supplies the muscles of facial expression and the expression and taste at the anterior two-thirds of the tongue. The principal branches are the superficial opthalmic, buccal, palatine and hyomandibular. The main trunk synapses within pterygopalatine ganglion in the parotid gland and this ganglion then gives of nerve branches which supply the lacrimal gland and the mucous secreting glands of the nasal and oral cavities." ! PROPOSED: developmental maturation that OBO_REL:results_in_developmental_progression_of cranial nerve VII [cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=ZFA:0000664])] [Term] id: GO:0021613 ! facial nerve maturation intersection_of: GO:0021700 ! developmental maturation intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0000664 ! cranial nerve VII synonym: "CN-VII developmental maturation" EXACT [OBOL:automatic] synonym: "CN-VII maturation" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021613: 8.87 ! parse: GO:0021614 using "glossopharyngeal nerve maturation" => cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=ZFA:0000668]) [-2] ! no existing xp def ! def: "A developmental process, independent of morphogenetic (shape) change, that is required for the glossopharyngeal nerve to attain its fully functional state. Various sensory and motor branches of the glossopharyngeal nerve supply nerve connections to the pharynx and back of the tongue. The branchial motor component contains motor fibers that innervate muscles that elevate the pharynx and larynx, and the tympanic branch supplies parasympathetic fibers to the otic ganglion." ! PROPOSED: developmental maturation that OBO_REL:results_in_developmental_progression_of cranial nerve IX [cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=ZFA:0000668])] [Term] id: GO:0021614 ! glossopharyngeal nerve maturation intersection_of: GO:0021700 ! developmental maturation intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0000668 ! cranial nerve IX synonym: "CN-IX developmental maturation" EXACT [OBOL:automatic] synonym: "CN-IX maturation" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021614: 8.86 ! parse: GO:0021615 using "CN IX morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(CN IX, anatomy)]) [-6] ! parse: GO:0021615 using "glossopharyngeal nerve morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0000668]) [-2] ! no existing xp def ! def: "The process by which the anatomical structure of the glossopharyngeal nerve is generated and organized. Morphogenesis pertains to the creation of form. Various sensory and motor branches of the glossopharyngeal nerve supply nerve connections to the pharynx and back of the tongue. The branchial motor component contains motor fibers that innervate muscles that elevate the pharynx and larynx, and the tympanic branch supplies parasympathetic fibers to the otic ganglion." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of cranial nerve IX [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0000668])] [Term] id: GO:0021615 ! glossopharyngeal nerve morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0000668 ! cranial nerve IX synonym: "CN-IX anatomical structure morphogenesis" EXACT [OBOL:automatic] synonym: "CN-IX morphogenesis" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021615: 9.37 ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0021616 using "CN IX formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(CN IX, anatomy)]) [-6] ! parse: GO:0021616 using "glossopharyngeal nerve formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=ZFA:0000668]) [-2] ! parse: GO:0021616 using "glossopharyngeal nerve formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0000668]) [-2] ! no existing xp def ! def: "The process that gives rise to the glossopharyngeal nerve. This process pertains to the initial formation of a structure from unspecified parts. Various sensory and motor branches of the glossopharyngeal nerve supply nerve connections to the pharynx and back of the tongue. The branchial motor component contains motor fibers that innervate muscles that elevate the pharynx and larynx, and the tympanic branch supplies parasympathetic fibers to the otic ganglion." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of cranial nerve IX [cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0000668])] [Term] id: GO:0021616 ! glossopharyngeal nerve formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of ZFA:0000668 ! cranial nerve IX synonym: "CN-IX anatomical structure formation" EXACT [OBOL:automatic] synonym: "CN-IX formation" EXACT [OBOL:automatic] synonym: "CN-IX formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021616: 13.63 ! parse: GO:0021617 using "CN IX structural organization" => cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=anon(CN IX, anatomy)]) [-6] ! parse: GO:0021617 using "glossopharyngeal nerve structural organization" => cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=ZFA:0000668]) [-2] ! no existing xp def ! def: "The process that contributes to the act of creating the structural organization of the glossopharyngeal nerve. This process pertains to the physical shaping of a rudimentary structure. Various sensory and motor branches of the glossopharyngeal nerve supply nerve connections to the pharynx and back of the tongue. The branchial motor component contains motor fibers that innervate muscles that elevate the pharynx and larynx, and the tympanic branch supplies parasympathetic fibers to the otic ganglion." ! PROPOSED: organization of an anatomical structure that OBO_REL:results_in_developmental_progression_of cranial nerve IX [cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=ZFA:0000668])] [Term] id: GO:0021617 ! glossopharyngeal nerve structural organization intersection_of: GO:0048532 ! organization of an anatomical structure intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0000668 ! cranial nerve IX synonym: "CN-IX anatomical structure organization" EXACT [OBOL:automatic] synonym: "CN-IX organization of an anatomical structure" EXACT [OBOL:automatic] synonym: "CN-IX structural organization" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021617: 9.46 ! parse: GO:0021622 using "CN III morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(CN III, anatomy)]) [-7] ! parse: GO:0021622 using "oculomotor nerve morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0000405]) [-2] ! no existing xp def ! def: "The process by which the anatomical structure of the oculomotor nerve is generated and organized. Morphogenesis pertains to the creation of form. This motor nerve innervates all extraocular muscles except the superior oblique and the lateral rectus muscles. The superior division supplies the levator palpebrae superioris and superior rectus muscles. The inferior division supplies the medial rectus, inferior rectus and inferior oblique muscles. This nerve also innervates the striated muscles of the eyelid. Pupillary constriction and lens movement are mediated by this nerve for near vision. In the orbit the inferior division sends branches that enter the ciliary ganglion where they form functional contacts (synapses) with the ganglion cells. The ganglion cells send nerve fibers into the back of the eye where they travel to ultimately innervate the ciliary muscle and the constrictor pupillae muscle." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of cranial nerve III [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0000405])] [Term] id: GO:0021622 ! oculomotor nerve morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0000405 ! cranial nerve III synonym: "CN-III anatomical structure morphogenesis" EXACT [OBOL:automatic] synonym: "CN-III morphogenesis" EXACT [OBOL:automatic] synonym: "occulomotor anatomical structure morphogenesis" EXACT [OBOL:automatic] synonym: "occulomotor morphogenesis" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021622: 9.37 ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0021623 using "CN III formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(CN III, anatomy)]) [-7] ! parse: GO:0021623 using "oculomotor nerve formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=ZFA:0000405]) [-2] ! parse: GO:0021623 using "oculomotor nerve formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0000405]) [-2] ! no existing xp def ! def: "The process that gives rise to the oculomotor nerve. This process pertains to the initial formation of a structure from unspecified parts. This motor nerve innervates all extraocular muscles except the superior oblique and the lateral rectus muscles. The superior division supplies the levator palpebrae superioris and superior rectus muscles. The inferior division supplies the medial rectus, inferior rectus and inferior oblique muscles. This nerve also innervates the striated muscles of the eyelid. Pupillary constriction and lens movement are mediated by this nerve for near vision. In the orbit the inferior division sends branches that enter the ciliary ganglion where they form functional contacts (synapses) with the ganglion cells. The ganglion cells send nerve fibers into the back of the eye where they travel to ultimately innervate the ciliary muscle and the constrictor pupillae muscle." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of cranial nerve III [cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0000405])] [Term] id: GO:0021623 ! oculomotor nerve formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of ZFA:0000405 ! cranial nerve III synonym: "CN-III anatomical structure formation" EXACT [OBOL:automatic] synonym: "CN-III formation" EXACT [OBOL:automatic] synonym: "CN-III formation of an anatomical structure" EXACT [OBOL:automatic] synonym: "occulomotor anatomical structure formation" EXACT [OBOL:automatic] synonym: "occulomotor formation" EXACT [OBOL:automatic] synonym: "occulomotor formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021623: 13.64 ! parse: GO:0021624 using "CN III structural organization" => cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=anon(CN III, anatomy)]) [-7] ! parse: GO:0021624 using "oculomotor nerve structural organization" => cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=ZFA:0000405]) [-2] ! no existing xp def ! def: "The process that contributes to the act of creating the structural organization of the oculomotor nerve. This process pertains to the physical shaping of a rudimentary structure. This motor nerve innervates all extraocular muscles except the superior oblique and the lateral rectus muscles. The superior division supplies the levator palpebrae superioris and superior rectus muscles. The inferior division supplies the medial rectus, inferior rectus and inferior oblique muscles. This nerve also innervates the striated muscles of the eyelid. Pupillary constriction and lens movement are mediated by this nerve for near vision. In the orbit the inferior division sends branches that enter the ciliary ganglion where they form functional contacts (synapses) with the ganglion cells. The ganglion cells send nerve fibers into the back of the eye where they travel to ultimately innervate the ciliary muscle and the constrictor pupillae muscle." ! PROPOSED: organization of an anatomical structure that OBO_REL:results_in_developmental_progression_of cranial nerve III [cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=ZFA:0000405])] [Term] id: GO:0021624 ! oculomotor nerve structural organization intersection_of: GO:0048532 ! organization of an anatomical structure intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0000405 ! cranial nerve III synonym: "CN-III anatomical structure organization" EXACT [OBOL:automatic] synonym: "CN-III organization of an anatomical structure" EXACT [OBOL:automatic] synonym: "CN-III structural organization" EXACT [OBOL:automatic] synonym: "occulomotor anatomical structure organization" EXACT [OBOL:automatic] synonym: "occulomotor organization of an anatomical structure" EXACT [OBOL:automatic] synonym: "occulomotor structural organization" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021624: 9.42 ! parse: GO:0021625 using "oculomotor nerve maturation" => cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=ZFA:0000405]) [-2] ! no existing xp def ! def: "A developmental process, independent of morphogenetic (shape) change, that is required for the oculomotor nerve to attain its fully functional state. This motor nerve innervates all extraocular muscles except the superior oblique and the lateral rectus muscles. The superior division supplies the levator palpebrae superioris and superior rectus muscles. The inferior division supplies the medial rectus, inferior rectus and inferior oblique muscles. This nerve also innervates the striated muscles of the eyelid. Pupillary constriction and lens movement are mediated by this nerve for near vision. In the orbit the inferior division sends branches that enter the ciliary ganglion where they form functional contacts (synapses) with the ganglion cells. The ganglion cells send nerve fibers into the back of the eye where they travel to ultimately innervate the ciliary muscle and the constrictor pupillae muscle." ! PROPOSED: developmental maturation that OBO_REL:results_in_developmental_progression_of cranial nerve III [cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=ZFA:0000405])] [Term] id: GO:0021625 ! oculomotor nerve maturation intersection_of: GO:0021700 ! developmental maturation intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0000405 ! cranial nerve III synonym: "CN-III developmental maturation" EXACT [OBOL:automatic] synonym: "CN-III maturation" EXACT [OBOL:automatic] synonym: "occulomotor developmental maturation" EXACT [OBOL:automatic] synonym: "occulomotor maturation" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021625: 8.88 ! parse: GO:0021626 using "central nervous system maturation" => cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=FBbt:00005094]) [-2] ! parse: GO:0021626 using "central nervous system maturation" => cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=MA:0000167]) [-2] ! parse: GO:0021626 using "central nervous system maturation" => cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=ZFA:0000012]) [-2] ! no existing xp def ! def: "A developmental process, independent of morphogenetic (shape) change, that is required for the central nervous system to attain its fully functional state. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord." ! PROPOSED: developmental maturation that OBO_REL:results_in_developmental_progression_of central nervous system [cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=ZFA:0000012])] [Term] id: GO:0021626 ! central nervous system maturation intersection_of: GO:0021700 ! developmental maturation intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0000012 ! central nervous system synonym: "cns developmental maturation" EXACT [OBOL:automatic] synonym: "cns maturation" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021626: 6.63 ! parse: GO:0021627 using "CN I morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(CN I, anatomy)]) [-5] ! parse: GO:0021627 using "olfactory nerve morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0000249]) [-2] ! no existing xp def ! def: "The process by which the anatomical structure of the olfactory nerve is generated and organized. Morphogenesis pertains to the creation of form. The olfactory nerve is a collection of sensory nerve rootlets that extend down from the olfactory bulb to the olfactory mucosa of the upper parts of the nasal cavity. This nerve conducts odor information to the brainstem." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of cranial nerve I [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0000249])] [Term] id: GO:0021627 ! olfactory nerve morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0000249 ! cranial nerve I synonym: "CN-I anatomical structure morphogenesis" EXACT [OBOL:automatic] synonym: "CN-I morphogenesis" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021627: 9.4 ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0021628 using "CN I formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(CN I, anatomy)]) [-5] ! parse: GO:0021628 using "olfactory nerve formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=ZFA:0000249]) [-2] ! parse: GO:0021628 using "olfactory nerve formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0000249]) [-2] ! no existing xp def ! def: "The process that gives rise to the olfactory nerve. This process pertains to the initial formation of a structure from unspecified parts. The olfactory nerve is a collection of sensory nerve rootlets that extend down from the olfactory bulb to the olfactory mucosa of the upper parts of the nasal cavity. This nerve conducts odor information to the brainstem." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of cranial nerve I [cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0000249])] [Term] id: GO:0021628 ! olfactory nerve formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of ZFA:0000249 ! cranial nerve I synonym: "CN-I anatomical structure formation" EXACT [OBOL:automatic] synonym: "CN-I formation" EXACT [OBOL:automatic] synonym: "CN-I formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021628: 13.64 ! parse: GO:0021629 using "CN I structural organization" => cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=anon(CN I, anatomy)]) [-5] ! parse: GO:0021629 using "olfactory nerve structural organization" => cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=ZFA:0000249]) [-2] ! no existing xp def ! def: "The process that contributes to the act of creating the structural organization of the oculomotor nerve. This process pertains to the physical shaping of a rudimentary structure. The olfactory nerve is a collection of sensory nerve rootlets that extend down from the olfactory bulb to the olfactory mucosa of the upper parts of the nasal cavity. This nerve conducts odor information to the brainstem." ! PROPOSED: organization of an anatomical structure that OBO_REL:results_in_developmental_progression_of cranial nerve I [cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=ZFA:0000249])] [Term] id: GO:0021629 ! olfactory nerve structural organization intersection_of: GO:0048532 ! organization of an anatomical structure intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0000249 ! cranial nerve I synonym: "CN-I anatomical structure organization" EXACT [OBOL:automatic] synonym: "CN-I organization of an anatomical structure" EXACT [OBOL:automatic] synonym: "CN-I structural organization" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021629: 9.42 ! parse: GO:0021630 using "olfactory nerve maturation" => cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=ZFA:0000249]) [-2] ! no existing xp def ! def: "A developmental process, independent of morphogenetic (shape) change, that is required for the olfactory nerve to attain its fully functional state. The olfactory nerve is a collection of sensory nerve rootlets that extend down from the olfactory bulb to the olfactory mucosa of the upper parts of the nasal cavity. This nerve conducts odor information to the brainstem." ! PROPOSED: developmental maturation that OBO_REL:results_in_developmental_progression_of cranial nerve I [cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=ZFA:0000249])] [Term] id: GO:0021630 ! olfactory nerve maturation intersection_of: GO:0021700 ! developmental maturation intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0000249 ! cranial nerve I synonym: "CN-I developmental maturation" EXACT [OBOL:automatic] synonym: "CN-I maturation" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021630: 8.88 ! parse: GO:0021631 using "CN II morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(CN II, anatomy)]) [-6] ! parse: GO:0021631 using "optic nerve morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00001956]) [-2] ! parse: GO:0021631 using "optic nerve morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00005105, OBO_REL:unfolds_in=ZFA:0000435]) [-3] ! parse: GO:0021631 using "optic nerve morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000217, OBO_REL:unfolds_in=ZFA:0000435]) [-3] ! parse: GO:0021631 using "optic nerve morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0000435]) [-2] ! parse: GO:0021631 using "optic nerve morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=cdef(FBbt:00005105, [OBO_REL:part_of=ZFA:0000435])]) [-3] ! parse: GO:0021631 using "optic nerve morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=cdef(MA:0000217, [OBO_REL:part_of=ZFA:0000435])]) [-3] ! no existing xp def ! def: "The process by which the anatomical structure of the optic nerve is generated and organized. Morphogenesis pertains to the creation of form. The sensory optic nerve originates from the bipolar cells of the retina and conducts visual information to the brainstem. The optic nerve exits the back of the eye in the orbit, enters the optic canal, and enters the central nervous system at the optic chiasm (crossing) where the nerve fibers become the optic tract just prior to entering the hindbrain." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of cranial nerve II [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0000435])] [Term] id: GO:0021631 ! optic nerve morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0000435 ! cranial nerve II ! seconds spent parsing GO:0021631: 19.37 ! parse: GO:0021632 using "optic nerve maturation" => cdef(GO:0021682, [OBO_REL:results_in_developmental_progression_of=ZFA:0000435]) [-2] ! parse: GO:0021632 using "optic nerve maturation" => cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=FBbt:00001956]) [-2] ! parse: GO:0021632 using "optic nerve maturation" => cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=FBbt:00005105, OBO_REL:unfolds_in=ZFA:0000435]) [-3] ! parse: GO:0021632 using "optic nerve maturation" => cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=MA:0000217, OBO_REL:unfolds_in=ZFA:0000435]) [-3] ! parse: GO:0021632 using "optic nerve maturation" => cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=ZFA:0000435]) [-2] ! parse: GO:0021632 using "optic nerve maturation" => cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=cdef(FBbt:00005105, [OBO_REL:part_of=ZFA:0000435])]) [-3] ! parse: GO:0021632 using "optic nerve maturation" => cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=cdef(MA:0000217, [OBO_REL:part_of=ZFA:0000435])]) [-3] ! no existing xp def ! def: "A developmental process, independent of morphogenetic (shape) change, that is required for the optic nerve to attain its fully functional state. The sensory optic nerve originates from the bipolar cells of the retina and conducts visual information to the brainstem. The optic nerve exits the back of the eye in the orbit, enters the optic canal, and enters the central nervous system at the optic chiasm (crossing) where the nerve fibers become the optic tract just prior to entering the hindbrain." ! PROPOSED: developmental maturation that OBO_REL:results_in_developmental_progression_of cranial nerve II [cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=ZFA:0000435])] [Term] id: GO:0021632 ! optic nerve maturation intersection_of: GO:0021700 ! developmental maturation intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0000435 ! cranial nerve II ! seconds spent parsing GO:0021632: 17.61 ! parse: GO:0021633 using "CN II structural organization" => cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=anon(CN II, anatomy)]) [-6] ! parse: GO:0021633 using "optic nerve structural organization" => cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=FBbt:00001956]) [-2] ! parse: GO:0021633 using "optic nerve structural organization" => cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=FBbt:00005105, OBO_REL:unfolds_in=ZFA:0000435]) [-3] ! parse: GO:0021633 using "optic nerve structural organization" => cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=MA:0000217, OBO_REL:unfolds_in=ZFA:0000435]) [-3] ! parse: GO:0021633 using "optic nerve structural organization" => cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=ZFA:0000435]) [-2] ! parse: GO:0021633 using "optic nerve structural organization" => cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=cdef(FBbt:00005105, [OBO_REL:part_of=ZFA:0000435])]) [-3] ! parse: GO:0021633 using "optic nerve structural organization" => cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=cdef(MA:0000217, [OBO_REL:part_of=ZFA:0000435])]) [-3] ! no existing xp def ! def: "The process that contributes to the act of creating the structural organization of the optic nerve. This process pertains to the physical shaping of a rudimentary structure. The sensory optic nerve originates from the bipolar cells of the retina and conducts visual information to the brainstem. The optic nerve exits the back of the eye in the orbit, enters the optic canal, and enters the central nervous system at the optic chiasm (crossing) where the nerve fibers become the optic tract just prior to entering the hindbrain." ! PROPOSED: organization of an anatomical structure that OBO_REL:results_in_developmental_progression_of cranial nerve II [cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=ZFA:0000435])] [Term] id: GO:0021633 ! optic nerve structural organization intersection_of: GO:0048532 ! organization of an anatomical structure intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0000435 ! cranial nerve II ! seconds spent parsing GO:0021633: 19.43 ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0021634 using "CN II formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(CN II, anatomy)]) [-6] ! parse: GO:0021634 using "optic nerve formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=FBbt:00001956]) [-2] ! parse: GO:0021634 using "optic nerve formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=FBbt:00005105, OBO_REL:unfolds_in=ZFA:0000435]) [-3] ! parse: GO:0021634 using "optic nerve formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=MA:0000217, OBO_REL:unfolds_in=ZFA:0000435]) [-3] ! parse: GO:0021634 using "optic nerve formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=ZFA:0000435]) [-2] ! parse: GO:0021634 using "optic nerve formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=cdef(FBbt:00005105, [OBO_REL:part_of=ZFA:0000435])]) [-3] ! parse: GO:0021634 using "optic nerve formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=cdef(MA:0000217, [OBO_REL:part_of=ZFA:0000435])]) [-3] ! parse: GO:0021634 using "optic nerve formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=FBbt:00001956]) [-2] ! parse: GO:0021634 using "optic nerve formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=FBbt:00005105, OBO_REL:unfolds_in=ZFA:0000435]) [-3] ! parse: GO:0021634 using "optic nerve formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=MA:0000217, OBO_REL:unfolds_in=ZFA:0000435]) [-3] ! parse: GO:0021634 using "optic nerve formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0000435]) [-2] ! parse: GO:0021634 using "optic nerve formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=cdef(FBbt:00005105, [OBO_REL:part_of=ZFA:0000435])]) [-3] ! parse: GO:0021634 using "optic nerve formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=cdef(MA:0000217, [OBO_REL:part_of=ZFA:0000435])]) [-3] ! no existing xp def ! def: "The process that gives rise to the optic nerve. This process pertains to the initial formation of a structure from unspecified parts. The sensory optic nerve originates from the bipolar cells of the retina and conducts visual information to the brainstem. The optic nerve exits the back of the eye in the orbit, enters the optic canal, and enters the central nervous system at the optic chiasm (crossing) where the nerve fibers become the optic tract just prior to entering the hindbrain." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of cranial nerve II [cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0000435])] [Term] id: GO:0021634 ! optic nerve formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of ZFA:0000435 ! cranial nerve II ! seconds spent parsing GO:0021634: 23.87 ! parse: GO:0021635 using "trigeminal nerve maturation" => cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=ZFA:0000697]) [-2] ! no existing xp def ! def: "A developmental process, independent of morphogenetic (shape) change, that is required for the trigeminal nerve to attain its fully functional state. The trigeminal nerve is composed of three large branches. They are the ophthalmic (V1, sensory), maxillary (V2, sensory) and mandibular (V3, motor and sensory) branches. The sensory ophthalmic branch travels through the superior orbital fissure and passes through the orbit to reach the skin of the forehead and top of the head. The maxillary nerve contains sensory branches that reach the pterygopalatine fossa via the inferior orbital fissure (face, cheek and upper teeth) and pterygopalatine canal (soft and hard palate, nasal cavity and pharynx). The motor part of the mandibular branch is distributed to the muscles of mastication, the mylohyoid muscle and the anterior belly of the digastric. The mandibular nerve also innervates the tensor veli palatini and tensor tympani muscles. The sensory part of the mandibular nerve is composed of branches that carry general sensory information from the mucous membranes of the mouth and cheek, anterior two-thirds of the tongue, lower teeth, skin of the lower jaw, side of the head and scalp and meninges of the anterior and middle cranial fossae." ! PROPOSED: developmental maturation that OBO_REL:results_in_developmental_progression_of cranial nerve V [cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=ZFA:0000697])] [Term] id: GO:0021635 ! trigeminal nerve maturation intersection_of: GO:0021700 ! developmental maturation intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0000697 ! cranial nerve V synonym: "CN-V developmental maturation" EXACT [OBOL:automatic] synonym: "CN-V maturation" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021635: 9.1 ! parse: GO:0021636 using "CN V morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(CN V, anatomy)]) [-5] ! parse: GO:0021636 using "trigeminal nerve morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0000697]) [-2] ! no existing xp def ! def: "The process by which the anatomical structure of the trigeminal nerve is generated and organized. Morphogenesis pertains to the creation of form. The trigeminal nerve is composed of three large branches. They are the ophthalmic (V1, sensory), maxillary (V2, sensory) and mandibular (V3, motor and sensory) branches. The sensory ophthalmic branch travels through the superior orbital fissure and passes through the orbit to reach the skin of the forehead and top of the head. The maxillary nerve contains sensory branches that reach the pterygopalatine fossa via the inferior orbital fissure (face, cheek and upper teeth) and pterygopalatine canal (soft and hard palate, nasal cavity and pharynx). The motor part of the mandibular branch is distributed to the muscles of mastication, the mylohyoid muscle and the anterior belly of the digastric. The mandibular nerve also innervates the tensor veli palatini and tensor tympani muscles. The sensory part of the mandibular nerve is composed of branches that carry general sensory information from the mucous membranes of the mouth and cheek, anterior two-thirds of the tongue, lower teeth, skin of the lower jaw, side of the head and scalp and meninges of the anterior and middle cranial fossae." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of cranial nerve V [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0000697])] [Term] id: GO:0021636 ! trigeminal nerve morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0000697 ! cranial nerve V synonym: "CN-V anatomical structure morphogenesis" EXACT [OBOL:automatic] synonym: "CN-V morphogenesis" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021636: 9.59 ! parse: GO:0021637 using "CN V structural organization" => cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=anon(CN V, anatomy)]) [-5] ! parse: GO:0021637 using "trigeminal nerve structural organization" => cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=ZFA:0000697]) [-2] ! no existing xp def ! def: "The process that contributes to the act of creating the structural organization of the oculomotor nerve. This process pertains to the physical shaping of a rudimentary structure. The trigeminal nerve is composed of three large branches. They are the ophthalmic (V1, sensory), maxillary (V2, sensory) and mandibular (V3, motor and sensory) branches. The sensory ophthalmic branch travels through the superior orbital fissure and passes through the orbit to reach the skin of the forehead and top of the head. The maxillary nerve contains sensory branches that reach the pterygopalatine fossa via the inferior orbital fissure (face, cheek and upper teeth) and pterygopalatine canal (soft and hard palate, nasal cavity and pharynx). The motor part of the mandibular branch is distributed to the muscles of mastication, the mylohyoid muscle and the anterior belly of the digastric. The mandibular nerve also innervates the tensor veli palatini and tensor tympani muscles. The sensory part of the mandibular nerve is composed of branches that carry general sensory information from the mucous membranes of the mouth and cheek, anterior two-thirds of the tongue, lower teeth, skin of the lower jaw, side of the head and scalp and meninges of the anterior and middle cranial fossae." ! PROPOSED: organization of an anatomical structure that OBO_REL:results_in_developmental_progression_of cranial nerve V [cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=ZFA:0000697])] [Term] id: GO:0021637 ! trigeminal nerve structural organization intersection_of: GO:0048532 ! organization of an anatomical structure intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0000697 ! cranial nerve V synonym: "CN-V anatomical structure organization" EXACT [OBOL:automatic] synonym: "CN-V organization of an anatomical structure" EXACT [OBOL:automatic] synonym: "CN-V structural organization" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021637: 9.61 ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0021638 using "CN V formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(CN V, anatomy)]) [-5] ! parse: GO:0021638 using "trigeminal nerve formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=ZFA:0000697]) [-2] ! parse: GO:0021638 using "trigeminal nerve formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0000697]) [-2] ! no existing xp def ! def: "The process that gives rise to the trigeminal nerve. This process pertains to the initial formation of a structure from unspecified parts. The trigeminal nerve is composed of three large branches. They are the ophthalmic (V1, sensory), maxillary (V2, sensory) and mandibular (V3, motor and sensory) branches. The sensory ophthalmic branch travels through the superior orbital fissure and passes through the orbit to reach the skin of the forehead and top of the head. The maxillary nerve contains sensory branches that reach the pterygopalatine fossa via the inferior orbital fissure (face, cheek and upper teeth) and pterygopalatine canal (soft and hard palate, nasal cavity and pharynx). The motor part of the mandibular branch is distributed to the muscles of mastication, the mylohyoid muscle and the anterior belly of the digastric. The mandibular nerve also innervates the tensor veli palatini and tensor tympani muscles. The sensory part of the mandibular nerve is composed of branches that carry general sensory information from the mucous membranes of the mouth and cheek, anterior two-thirds of the tongue, lower teeth, skin of the lower jaw, side of the head and scalp and meninges of the anterior and middle cranial fossae." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of cranial nerve V [cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0000697])] [Term] id: GO:0021638 ! trigeminal nerve formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of ZFA:0000697 ! cranial nerve V synonym: "CN-V anatomical structure formation" EXACT [OBOL:automatic] synonym: "CN-V formation" EXACT [OBOL:automatic] synonym: "CN-V formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021638: 14.04 ! parse: GO:0021639 using "CH IV morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(IV, anatomy), OBO_REL:unfolds_in=FBbt:00000403]) [-4] ! parse: GO:0021639 using "trochlear nerve morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00005105, OBO_REL:unfolds_in=ZFA:0000600]) [-3] ! parse: GO:0021639 using "trochlear nerve morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000217, OBO_REL:unfolds_in=ZFA:0000600]) [-3] ! parse: GO:0021639 using "trochlear nerve morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0000600]) [-2] ! parse: GO:0021639 using "trochlear nerve morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=cdef(FBbt:00005105, [OBO_REL:part_of=ZFA:0000600])]) [-3] ! parse: GO:0021639 using "trochlear nerve morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=cdef(MA:0000217, [OBO_REL:part_of=ZFA:0000600])]) [-3] ! no existing xp def ! def: "The process by which the anatomical structure of the trochlear nerve is generated and organized. Morphogenesis pertains to the creation of form. The trochlear nerve is a motor nerve and is the only cranial nerve to exit the brain dorsally. The trochlear nerve innervates the superior oblique muscle." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of cranial nerve IV [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0000600])] [Term] id: GO:0021639 ! trochlear nerve morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0000600 ! cranial nerve IV synonym: "CN-IV anatomical structure morphogenesis" EXACT [OBOL:automatic] synonym: "CN-IV morphogenesis" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021639: 16.85 ! parse: GO:0021640 using "trochlear nerve maturation" => cdef(GO:0021682, [OBO_REL:results_in_developmental_progression_of=ZFA:0000600]) [-2] ! parse: GO:0021640 using "trochlear nerve maturation" => cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=FBbt:00005105, OBO_REL:unfolds_in=ZFA:0000600]) [-3] ! parse: GO:0021640 using "trochlear nerve maturation" => cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=MA:0000217, OBO_REL:unfolds_in=ZFA:0000600]) [-3] ! parse: GO:0021640 using "trochlear nerve maturation" => cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=ZFA:0000600]) [-2] ! parse: GO:0021640 using "trochlear nerve maturation" => cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=cdef(FBbt:00005105, [OBO_REL:part_of=ZFA:0000600])]) [-3] ! parse: GO:0021640 using "trochlear nerve maturation" => cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=cdef(MA:0000217, [OBO_REL:part_of=ZFA:0000600])]) [-3] ! no existing xp def ! def: "A developmental process, independent of morphogenetic (shape) change, that is required for the trochlear nerve to attain its fully functional state. The trochlear nerve is a motor nerve and is the only cranial nerve to exit the brain dorsally. The trochlear nerve innervates the superior oblique muscle." ! PROPOSED: developmental maturation that OBO_REL:results_in_developmental_progression_of cranial nerve IV [cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=ZFA:0000600])] [Term] id: GO:0021640 ! trochlear nerve maturation intersection_of: GO:0021700 ! developmental maturation intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0000600 ! cranial nerve IV synonym: "CN-IV developmental maturation" EXACT [OBOL:automatic] synonym: "CN-IV maturation" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021640: 11.62 ! parse: GO:0021641 using "CN IV structural organization" => cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=anon(CN IV, anatomy)]) [-6] ! parse: GO:0021641 using "trochlear nerve structural organization" => cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=FBbt:00005105, OBO_REL:unfolds_in=ZFA:0000600]) [-3] ! parse: GO:0021641 using "trochlear nerve structural organization" => cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=MA:0000217, OBO_REL:unfolds_in=ZFA:0000600]) [-3] ! parse: GO:0021641 using "trochlear nerve structural organization" => cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=ZFA:0000600]) [-2] ! parse: GO:0021641 using "trochlear nerve structural organization" => cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=cdef(FBbt:00005105, [OBO_REL:part_of=ZFA:0000600])]) [-3] ! parse: GO:0021641 using "trochlear nerve structural organization" => cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=cdef(MA:0000217, [OBO_REL:part_of=ZFA:0000600])]) [-3] ! no existing xp def ! def: "The process that contributes to the act of creating the structural organization of the trochlear nerve. This process pertains to the physical shaping of a rudimentary structure. The trochlear nerve is a motor nerve and is the only cranial nerve to exit the brain dorsally. The trochlear nerve innervates the superior oblique muscle." ! PROPOSED: organization of an anatomical structure that OBO_REL:results_in_developmental_progression_of cranial nerve IV [cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=ZFA:0000600])] [Term] id: GO:0021641 ! trochlear nerve structural organization intersection_of: GO:0048532 ! organization of an anatomical structure intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0000600 ! cranial nerve IV synonym: "CN-IV anatomical structure organization" EXACT [OBOL:automatic] synonym: "CN-IV organization of an anatomical structure" EXACT [OBOL:automatic] synonym: "CN-IV structural organization" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021641: 12.5 ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0021642 using "CN IV formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(CN IV, anatomy)]) [-6] ! parse: GO:0021642 using "trochlear nerve formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=FBbt:00005105, OBO_REL:unfolds_in=ZFA:0000600]) [-3] ! parse: GO:0021642 using "trochlear nerve formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=MA:0000217, OBO_REL:unfolds_in=ZFA:0000600]) [-3] ! parse: GO:0021642 using "trochlear nerve formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=ZFA:0000600]) [-2] ! parse: GO:0021642 using "trochlear nerve formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=cdef(FBbt:00005105, [OBO_REL:part_of=ZFA:0000600])]) [-3] ! parse: GO:0021642 using "trochlear nerve formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=cdef(MA:0000217, [OBO_REL:part_of=ZFA:0000600])]) [-3] ! parse: GO:0021642 using "trochlear nerve formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=FBbt:00005105, OBO_REL:unfolds_in=ZFA:0000600]) [-3] ! parse: GO:0021642 using "trochlear nerve formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=MA:0000217, OBO_REL:unfolds_in=ZFA:0000600]) [-3] ! parse: GO:0021642 using "trochlear nerve formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0000600]) [-2] ! parse: GO:0021642 using "trochlear nerve formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=cdef(FBbt:00005105, [OBO_REL:part_of=ZFA:0000600])]) [-3] ! parse: GO:0021642 using "trochlear nerve formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=cdef(MA:0000217, [OBO_REL:part_of=ZFA:0000600])]) [-3] ! no existing xp def ! def: "The process that gives rise to the trochlear nerve. This process pertains to the initial formation of a structure from unspecified parts. The trochlear nerve is a motor nerve and is the only cranial nerve to exit the brain dorsally. The trochlear nerve innervates the superior oblique muscle." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of cranial nerve IV [cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0000600])] [Term] id: GO:0021642 ! trochlear nerve formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of ZFA:0000600 ! cranial nerve IV synonym: "CN-IV anatomical structure formation" EXACT [OBOL:automatic] synonym: "CN-IV formation" EXACT [OBOL:automatic] synonym: "CN-IV formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021642: 16.85 ! parse: GO:0021643 using "vagus nerve maturation" => cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=ZFA:0000453]) [-2] ! no existing xp def ! def: "A developmental process, independent of morphogenetic (shape) change, that is required for the vagus nerve to attain its fully functional state. This nerve is primarily sensory but also has visceromotor components. It originates in the brain stem and controls many autonomic functions of the heart, lungs, stomach, pharynx, larynx, trachea, esophagus and other gastrointestinal tract components. It controls some motor functions such as speech. The sensory branches mediate sensation from the pharynx, larynx, thorax and abdomen; it also innervates taste buds in the epiglottis." ! PROPOSED: developmental maturation that OBO_REL:results_in_developmental_progression_of cranial nerve X [cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=ZFA:0000453])] [Term] id: GO:0021643 ! vagus nerve maturation intersection_of: GO:0021700 ! developmental maturation intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0000453 ! cranial nerve X synonym: "CN-X developmental maturation" EXACT [OBOL:automatic] synonym: "CN-X maturation" EXACT [OBOL:automatic] synonym: "vagal nerve developmental maturation" EXACT [OBOL:automatic] synonym: "vagal nerve maturation" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021643: 8.87 ! parse: GO:0021644 using "CN X morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(CN X, anatomy)]) [-5] ! parse: GO:0021644 using "vagus nerve morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0000453]) [-2] ! no existing xp def ! def: "The process by which the anatomical structure of the vagus nerve is generated and organized. Morphogenesis pertains to the creation of form. This nerve is primarily sensory but also has visceromotor components. It originates in the brain stem and controls many autonomic functions of the heart, lungs, stomach, pharynx, larynx, trachea, esophagus and other gastrointestinal tract components. It controls some motor functions such as speech. The sensory branches mediate sensation from the pharynx, larynx, thorax and abdomen; it also innervates taste buds in the epiglottis." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of cranial nerve X [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0000453])] [Term] id: GO:0021644 ! vagus nerve morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0000453 ! cranial nerve X synonym: "CN-X anatomical structure morphogenesis" EXACT [OBOL:automatic] synonym: "CN-X morphogenesis" EXACT [OBOL:automatic] synonym: "vagal nerve anatomical structure morphogenesis" EXACT [OBOL:automatic] synonym: "vagal nerve morphogenesis" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021644: 9.37 ! parse: GO:0021645 using "CN X structural organization" => cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=anon(CN X, anatomy)]) [-5] ! parse: GO:0021645 using "vagus nerve structural organization" => cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=ZFA:0000453]) [-2] ! no existing xp def ! def: "The process that contributes to the act of creating the structural organization of the vagus nerve. This process pertains to the physical shaping of a rudimentary structure. This nerve is primarily sensory but also has visceromotor components. It originates in the brain stem and controls many autonomic functions of the heart, lungs, stomach, pharynx, larynx, trachea, esophagus and other gastrointestinal tract components. It controls some motor functions such as speech. The sensory branches mediate sensation from the pharynx, larynx, thorax and abdomen; it also innervates taste buds in the epiglottis." ! PROPOSED: organization of an anatomical structure that OBO_REL:results_in_developmental_progression_of cranial nerve X [cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=ZFA:0000453])] [Term] id: GO:0021645 ! vagus nerve structural organization intersection_of: GO:0048532 ! organization of an anatomical structure intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0000453 ! cranial nerve X synonym: "CN-X anatomical structure organization" EXACT [OBOL:automatic] synonym: "CN-X organization of an anatomical structure" EXACT [OBOL:automatic] synonym: "CN-X structural organization" EXACT [OBOL:automatic] synonym: "vagal nerve anatomical structure organization" EXACT [OBOL:automatic] synonym: "vagal nerve organization of an anatomical structure" EXACT [OBOL:automatic] synonym: "vagal nerve structural organization" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021645: 9.47 ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0021646 using "CN X formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(CN X, anatomy)]) [-5] ! parse: GO:0021646 using "vagus nerve formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=ZFA:0000453]) [-2] ! parse: GO:0021646 using "vagus nerve formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0000453]) [-2] ! no existing xp def ! def: "The process that gives rise to the vagus nerve. This process pertains to the initial formation of a structure from unspecified parts. This nerve is primarily sensory but also has visceromotor components. It originates in the brain stem and controls many autonomic functions of the heart, lungs, stomach, pharynx, larynx, trachea, esophagus and other gastrointestinal tract components. It controls some motor functions such as speech. The sensory branches mediate sensation from the pharynx, larynx, thorax and abdomen; it also innervates taste buds in the epiglottis." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of cranial nerve X [cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0000453])] [Term] id: GO:0021646 ! vagus nerve formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of ZFA:0000453 ! cranial nerve X synonym: "CN-X anatomical structure formation" EXACT [OBOL:automatic] synonym: "CN-X formation" EXACT [OBOL:automatic] synonym: "CN-X formation of an anatomical structure" EXACT [OBOL:automatic] synonym: "vagal nerve anatomical structure formation" EXACT [OBOL:automatic] synonym: "vagal nerve formation" EXACT [OBOL:automatic] synonym: "vagal nerve formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021646: 13.65 ! parse: GO:0021647 using "auditory nerve maturation" => cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=ZFA:0000247]) [-2] ! parse: GO:0021647 using "vestibulocochlear nerve maturation" => cdef(GO:0021682, [OBO_REL:results_in_developmental_progression_of=anon(vestibulocochlear, anatomy)]) [-18] ! no existing xp def ! def: "A developmental process, independent of morphogenetic (shape) change, that is required for the vestibulocochlear nerve to attain its fully functional state. This sensory nerve innervates the membranous labyrinth of the inner ear. The vestibular branch innervates the vestibular apparatus that senses head position changes relative to gravity. The auditory branch innervates the cochlear duct, which is connected to the three bony ossicles which transduce sound waves into fluid movement in the cochlea." ! PROPOSED: developmental maturation that OBO_REL:results_in_developmental_progression_of cranial nerve VIII [cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=ZFA:0000247])] [Term] id: GO:0021647 ! vestibulocochlear nerve maturation intersection_of: GO:0021700 ! developmental maturation intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0000247 ! cranial nerve VIII synonym: "CN-VIII developmental maturation" EXACT [OBOL:automatic] synonym: "CN-VIII maturation" EXACT [OBOL:automatic] synonym: "auditory nerve developmental maturation" EXACT [OBOL:automatic] synonym: "octaval nerve developmental maturation" EXACT [OBOL:automatic] synonym: "octaval nerve maturation" EXACT [OBOL:automatic] synonym: "statoacoustic nerve developmental maturation" EXACT [OBOL:automatic] synonym: "statoacoustic nerve maturation" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021647: 13.27 ! parse: GO:0021651 using "rhombomere 1 morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0001031]) [-2] ! parse: GO:0021651 using "rhombomere 1 morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(1, anatomy), OBO_REL:unfolds_in=ZFA:0001064]) [-3] ! no existing xp def ! def: "The process by which the anatomical structure of rhombomere 1 is generated and organized. Morphogenesis pertains to the creation of form. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in an anterior to posterior order." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of rhombomere 1 [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0001031])] [Term] id: GO:0021651 ! rhombomere 1 morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0001031 ! rhombomere 1 synonym: "r 1 anatomical structure morphogenesis" EXACT [OBOL:automatic] synonym: "r 1 morphogenesis" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021651: 9.64 ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0021652 using "rhombomere 1 formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=ZFA:0001031]) [-2] ! parse: GO:0021652 using "rhombomere 1 formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0001031]) [-2] ! parse: GO:0021652 using "rhombomere 1 formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(1, anatomy), OBO_REL:unfolds_in=ZFA:0001064]) [-3] ! no existing xp def ! def: "The process that gives rise to rhombomere 1. This process pertains to the initial formation of a structure from unspecified parts. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of rhombomere 1 [cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0001031])] [Term] id: GO:0021652 ! rhombomere 1 formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of ZFA:0001031 ! rhombomere 1 synonym: "r 1 anatomical structure formation" EXACT [OBOL:automatic] synonym: "r 1 formation" EXACT [OBOL:automatic] synonym: "r 1 formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021652: 9.71 ! parse: GO:0021653 using "rhombomere 1 structural organization" => cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=ZFA:0001031]) [-2] ! parse: GO:0021653 using "rhombomere 1 structural organization" => cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=anon(1, anatomy), OBO_REL:unfolds_in=ZFA:0001064]) [-3] ! no existing xp def ! def: "The process that contributes to creating the structural organization of rhombomere 1. This process pertains to the physical shaping of a rudimentary structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in an anterior to posterior order." ! PROPOSED: organization of an anatomical structure that OBO_REL:results_in_developmental_progression_of rhombomere 1 [cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=ZFA:0001031])] [Term] id: GO:0021653 ! rhombomere 1 structural organization intersection_of: GO:0048532 ! organization of an anatomical structure intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0001031 ! rhombomere 1 synonym: "r 1 anatomical structure organization" EXACT [OBOL:automatic] synonym: "r 1 organization of an anatomical structure" EXACT [OBOL:automatic] synonym: "r 1 structural organization" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021653: 9.73 ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0021654 using "rhombomere boundary formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(boundary, anatomy), OBO_REL:unfolds_in=ZFA:0001064]) [-10] ! no existing xp def ! def: "The process that gives rise to a rhombomere boundary. This process pertains to the initial formation of a boundary delimiting a rhombomere. Rhombomeres are transverse segments of the developing rhombencephalon that are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of anon(boundary, anatomy) and OBO_REL:unfolds_in rhombomere [cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(boundary, anatomy), OBO_REL:unfolds_in=ZFA:0001064])] [Term] id: GO:0021654 ! rhombomere boundary formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of anatomy:boundary intersection_of: OBO_REL:unfolds_in ZFA:0001064 ! rhombomere synonym: "hindbrain segment boundary anatomical structure formation" EXACT [OBOL:automatic] synonym: "hindbrain segment boundary formation" EXACT [OBOL:automatic] synonym: "hindbrain segment boundary formation of an anatomical structure" EXACT [OBOL:automatic] synonym: "neuromeres boundary anatomical structure formation" EXACT [OBOL:automatic] synonym: "neuromeres boundary formation" EXACT [OBOL:automatic] synonym: "neuromeres boundary formation of an anatomical structure" EXACT [OBOL:automatic] synonym: "rhombomeres boundary anatomical structure formation" EXACT [OBOL:automatic] synonym: "rhombomeres boundary formation" EXACT [OBOL:automatic] synonym: "rhombomeres boundary formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021654: 8.57 ! parse: GO:0021655 using "rhombomere 2 morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0000822]) [-2] ! parse: GO:0021655 using "rhombomere 2 morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(2, anatomy), OBO_REL:unfolds_in=ZFA:0001064]) [-3] ! no existing xp def ! def: "The process by which the anatomical structure of rhombomere 2 is generated and organized. Morphogenesis pertains to the creation of form. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in an anterior to posterior order." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of rhombomere 2 [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0000822])] [Term] id: GO:0021655 ! rhombomere 2 morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0000822 ! rhombomere 2 synonym: "r 2 anatomical structure morphogenesis" EXACT [OBOL:automatic] synonym: "r 2 morphogenesis" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021655: 9.66 ! parse: GO:0021656 using "rhombomere 2 structural organization" => cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=ZFA:0000822]) [-2] ! parse: GO:0021656 using "rhombomere 2 structural organization" => cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=anon(2, anatomy), OBO_REL:unfolds_in=ZFA:0001064]) [-3] ! no existing xp def ! def: "The process that contributes to creating the structural organization of rhombomere 2. This process pertains to the physical shaping of a rudimentary structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in an anterior to posterior order." ! PROPOSED: organization of an anatomical structure that OBO_REL:results_in_developmental_progression_of rhombomere 2 [cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=ZFA:0000822])] [Term] id: GO:0021656 ! rhombomere 2 structural organization intersection_of: GO:0048532 ! organization of an anatomical structure intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0000822 ! rhombomere 2 synonym: "r 2 anatomical structure organization" EXACT [OBOL:automatic] synonym: "r 2 organization of an anatomical structure" EXACT [OBOL:automatic] synonym: "r 2 structural organization" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021656: 9.69 ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0021657 using "rhombomere 2 formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=ZFA:0000822]) [-2] ! parse: GO:0021657 using "rhombomere 2 formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0000822]) [-2] ! parse: GO:0021657 using "rhombomere 2 formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(2, anatomy), OBO_REL:unfolds_in=ZFA:0001064]) [-3] ! no existing xp def ! def: "The process that gives rise to rhombomere 2. This process pertains to the initial formation of a structure from unspecified parts. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of rhombomere 2 [cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0000822])] [Term] id: GO:0021657 ! rhombomere 2 formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of ZFA:0000822 ! rhombomere 2 synonym: "r 2 anatomical structure formation" EXACT [OBOL:automatic] synonym: "r 2 formation" EXACT [OBOL:automatic] synonym: "r 2 formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021657: 9.72 ! parse: GO:0021658 using "rhombomere 3 morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0000948]) [-2] ! parse: GO:0021658 using "rhombomere 3 morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(3, anatomy), OBO_REL:unfolds_in=ZFA:0001064]) [-3] ! no existing xp def ! def: "The process by which the anatomical structure of rhombomere 3 is generated and organized. Morphogenesis pertains to the creation of form. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in an anterior to posterior order." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of rhombomere 3 [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0000948])] [Term] id: GO:0021658 ! rhombomere 3 morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0000948 ! rhombomere 3 synonym: "r 3 anatomical structure morphogenesis" EXACT [OBOL:automatic] synonym: "r 3 morphogenesis" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021658: 9.65 ! parse: GO:0021659 using "rhombomere 3 structural organization" => cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=ZFA:0000948]) [-2] ! parse: GO:0021659 using "rhombomere 3 structural organization" => cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=anon(3, anatomy), OBO_REL:unfolds_in=ZFA:0001064]) [-3] ! no existing xp def ! def: "The process that contributes to creating the structural organization of rhombomere 3. This process pertains to the physical shaping of a rudimentary structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in an anterior to posterior order." ! PROPOSED: organization of an anatomical structure that OBO_REL:results_in_developmental_progression_of rhombomere 3 [cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=ZFA:0000948])] [Term] id: GO:0021659 ! rhombomere 3 structural organization intersection_of: GO:0048532 ! organization of an anatomical structure intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0000948 ! rhombomere 3 synonym: "r 3 anatomical structure organization" EXACT [OBOL:automatic] synonym: "r 3 organization of an anatomical structure" EXACT [OBOL:automatic] synonym: "r 3 structural organization" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021659: 9.72 ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0021660 using "rhombomere 3 formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=ZFA:0000948]) [-2] ! parse: GO:0021660 using "rhombomere 3 formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0000948]) [-2] ! parse: GO:0021660 using "rhombomere 3 formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(3, anatomy), OBO_REL:unfolds_in=ZFA:0001064]) [-3] ! no existing xp def ! def: "The process that gives rise to rhombomere 3. This process pertains to the initial formation of a structure from unspecified parts. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of rhombomere 3 [cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0000948])] [Term] id: GO:0021660 ! rhombomere 3 formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of ZFA:0000948 ! rhombomere 3 synonym: "r 3 anatomical structure formation" EXACT [OBOL:automatic] synonym: "r 3 formation" EXACT [OBOL:automatic] synonym: "r 3 formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021660: 9.73 ! parse: GO:0021661 using "rhombomere 4 morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0001032]) [-2] ! parse: GO:0021661 using "rhombomere 4 morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(4, anatomy), OBO_REL:unfolds_in=ZFA:0001064]) [-3] ! no existing xp def ! def: "The process by which the anatomical structure of rhombomere 4 is generated and organized. Morphogenesis pertains to the creation of form. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in an anterior to posterior order." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of rhombomere 4 [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0001032])] [Term] id: GO:0021661 ! rhombomere 4 morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0001032 ! rhombomere 4 synonym: "r 4 anatomical structure morphogenesis" EXACT [OBOL:automatic] synonym: "r 4 morphogenesis" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021661: 9.65 ! parse: GO:0021662 using "rhombomere 4 structural organization" => cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=ZFA:0001032]) [-2] ! parse: GO:0021662 using "rhombomere 4 structural organization" => cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=anon(4, anatomy), OBO_REL:unfolds_in=ZFA:0001064]) [-3] ! no existing xp def ! def: "The process that contributes to creating the structural organization of rhombomere 4. This process pertains to the physical shaping of a rudimentary structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in an anterior to posterior order." ! PROPOSED: organization of an anatomical structure that OBO_REL:results_in_developmental_progression_of rhombomere 4 [cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=ZFA:0001032])] [Term] id: GO:0021662 ! rhombomere 4 structural organization intersection_of: GO:0048532 ! organization of an anatomical structure intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0001032 ! rhombomere 4 synonym: "r 4 anatomical structure organization" EXACT [OBOL:automatic] synonym: "r 4 organization of an anatomical structure" EXACT [OBOL:automatic] synonym: "r 4 structural organization" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021662: 9.68 ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0021663 using "rhombomere 4 formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=ZFA:0001032]) [-2] ! parse: GO:0021663 using "rhombomere 4 formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0001032]) [-2] ! parse: GO:0021663 using "rhombomere 4 formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(4, anatomy), OBO_REL:unfolds_in=ZFA:0001064]) [-3] ! no existing xp def ! def: "The process that gives rise to rhombomere 4. This process pertains to the initial formation of a structure from unspecified parts. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of rhombomere 4 [cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0001032])] [Term] id: GO:0021663 ! rhombomere 4 formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of ZFA:0001032 ! rhombomere 4 synonym: "r 4 anatomical structure formation" EXACT [OBOL:automatic] synonym: "r 4 formation" EXACT [OBOL:automatic] synonym: "r 4 formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021663: 9.73 ! parse: GO:0021664 using "rhombomere 5 morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0000823]) [-2] ! parse: GO:0021664 using "rhombomere 5 morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(5, anatomy), OBO_REL:unfolds_in=ZFA:0001064]) [-3] ! no existing xp def ! def: "The process by which the anatomical structures of rhombomere 5 are generated and organized. Morphogenesis pertains to the creation of form. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in an anterior to posterior order." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of rhombomere 5 [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0000823])] [Term] id: GO:0021664 ! rhombomere 5 morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0000823 ! rhombomere 5 synonym: "r 5 anatomical structure morphogenesis" EXACT [OBOL:automatic] synonym: "r 5 morphogenesis" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021664: 9.64 ! parse: GO:0021665 using "rhombomere 5 structural organization" => cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=ZFA:0000823]) [-2] ! parse: GO:0021665 using "rhombomere 5 structural organization" => cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=anon(5, anatomy), OBO_REL:unfolds_in=ZFA:0001064]) [-3] ! no existing xp def ! def: "The process that contributes to creating the structural organization of rhombomere 5. This process pertains to the physical shaping of a rudimentary structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in an anterior to posterior order." ! PROPOSED: organization of an anatomical structure that OBO_REL:results_in_developmental_progression_of rhombomere 5 [cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=ZFA:0000823])] [Term] id: GO:0021665 ! rhombomere 5 structural organization intersection_of: GO:0048532 ! organization of an anatomical structure intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0000823 ! rhombomere 5 synonym: "r 5 anatomical structure organization" EXACT [OBOL:automatic] synonym: "r 5 organization of an anatomical structure" EXACT [OBOL:automatic] synonym: "r 5 structural organization" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021665: 9.75 ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0021666 using "rhombomere 5 formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=ZFA:0000823]) [-2] ! parse: GO:0021666 using "rhombomere 5 formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0000823]) [-2] ! parse: GO:0021666 using "rhombomere 5 formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(5, anatomy), OBO_REL:unfolds_in=ZFA:0001064]) [-3] ! no existing xp def ! def: "The process that gives rise to rhombomere 5. This process pertains to the initial formation of a structure from unspecified parts. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of rhombomere 5 [cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0000823])] [Term] id: GO:0021666 ! rhombomere 5 formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of ZFA:0000823 ! rhombomere 5 synonym: "r 5 anatomical structure formation" EXACT [OBOL:automatic] synonym: "r 5 formation" EXACT [OBOL:automatic] synonym: "r 5 formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021666: 9.72 ! parse: GO:0021667 using "rhombomere 6 morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0000069]) [-2] ! parse: GO:0021667 using "rhombomere 6 morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(6, anatomy), OBO_REL:unfolds_in=ZFA:0001064]) [-3] ! no existing xp def ! def: "The process by which the anatomical structure of rhombomere 6 is generated and organized. Morphogenesis pertains to the creation of form. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in an anterior to posterior order." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of rhombomere 6 [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0000069])] [Term] id: GO:0021667 ! rhombomere 6 morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0000069 ! rhombomere 6 synonym: "r 6 anatomical structure morphogenesis" EXACT [OBOL:automatic] synonym: "r 6 morphogenesis" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021667: 9.64 ! parse: GO:0021668 using "rhombomere 6 structural organization" => cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=ZFA:0000069]) [-2] ! parse: GO:0021668 using "rhombomere 6 structural organization" => cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=anon(6, anatomy), OBO_REL:unfolds_in=ZFA:0001064]) [-3] ! no existing xp def ! def: "The process that contributes to creating the structural organization of rhombomere 6. This process pertains to the physical shaping of a rudimentary structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in an anterior to posterior order." ! PROPOSED: organization of an anatomical structure that OBO_REL:results_in_developmental_progression_of rhombomere 6 [cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=ZFA:0000069])] [Term] id: GO:0021668 ! rhombomere 6 structural organization intersection_of: GO:0048532 ! organization of an anatomical structure intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0000069 ! rhombomere 6 synonym: "r 6 anatomical structure organization" EXACT [OBOL:automatic] synonym: "r 6 organization of an anatomical structure" EXACT [OBOL:automatic] synonym: "r 6 structural organization" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021668: 9.69 ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0021669 using "rhombomere 6 formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=ZFA:0000069]) [-2] ! parse: GO:0021669 using "rhombomere 6 formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0000069]) [-2] ! parse: GO:0021669 using "rhombomere 6 formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(6, anatomy), OBO_REL:unfolds_in=ZFA:0001064]) [-3] ! no existing xp def ! def: "The process that gives rise to rhombomere 6. This process pertains to the initial formation of a structure from unspecified parts. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of rhombomere 6 [cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0000069])] [Term] id: GO:0021669 ! rhombomere 6 formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of ZFA:0000069 ! rhombomere 6 synonym: "r 6 anatomical structure formation" EXACT [OBOL:automatic] synonym: "r 6 formation" EXACT [OBOL:automatic] synonym: "r 6 formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021669: 9.72 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0021670 using "lateral ventricle development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000192]) [-2] ! parse: GO:0021670 using "lateral ventricle development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000696]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the lateral ventricles over time, from the formation to the mature structure. The two lateral ventricles are a cavity in each of the cerebral hemispheres derived from the cavity of the embryonic neural tube. They are separated from each other by the septum pellucidum, and each communicates with the third ventricle by the foramen of Monro, through which also the choroid plexuses of the lateral ventricles become continuous with that of the third ventricle." ! PROPOSED: developmental process that results_in_complete_developmental_of telencephalic ventricle [cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000696])] [Term] id: GO:0021670 ! lateral ventricle development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of ZFA:0000696 ! telencephalic ventricle synonym: "telencephalic ventricle development" EXACT [OBOL:automatic] synonym: "telencephalic vesicle development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021670: 5.65 ! parse: GO:0021671 using "rhombomere 7 morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0000949]) [-2] ! parse: GO:0021671 using "rhombomere 7 morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(7, anatomy), OBO_REL:unfolds_in=ZFA:0001064]) [-3] ! no existing xp def ! def: "The process by which the anatomical structure of rhombomere 7 is generated and organized. Morphogenesis pertains to the creation of form. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in an anterior to posterior order." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of rhombomere 7 [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0000949])] [Term] id: GO:0021671 ! rhombomere 7 morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0000949 ! rhombomere 7 synonym: "r 7 anatomical structure morphogenesis" EXACT [OBOL:automatic] synonym: "r 7 morphogenesis" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021671: 9.65 ! parse: GO:0021672 using "rhombomere 7 structural organization" => cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=ZFA:0000949]) [-2] ! parse: GO:0021672 using "rhombomere 7 structural organization" => cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=anon(7, anatomy), OBO_REL:unfolds_in=ZFA:0001064]) [-3] ! no existing xp def ! def: "The process that contributes to creating the structural organization of rhombomere 7. This process pertains to the physical shaping of a rudimentary structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in an anterior to posterior order." ! PROPOSED: organization of an anatomical structure that OBO_REL:results_in_developmental_progression_of rhombomere 7 [cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=ZFA:0000949])] [Term] id: GO:0021672 ! rhombomere 7 structural organization intersection_of: GO:0048532 ! organization of an anatomical structure intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0000949 ! rhombomere 7 synonym: "r 7 anatomical structure organization" EXACT [OBOL:automatic] synonym: "r 7 organization of an anatomical structure" EXACT [OBOL:automatic] synonym: "r 7 structural organization" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021672: 9.71 ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0021673 using "rhombomere 7 formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=ZFA:0000949]) [-2] ! parse: GO:0021673 using "rhombomere 7 formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0000949]) [-2] ! parse: GO:0021673 using "rhombomere 7 formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(7, anatomy), OBO_REL:unfolds_in=ZFA:0001064]) [-3] ! no existing xp def ! def: "The process that gives rise to rhombomere 7. This process pertains to the initial formation of a structure from unspecified parts. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of rhombomere 7 [cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0000949])] [Term] id: GO:0021673 ! rhombomere 7 formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of ZFA:0000949 ! rhombomere 7 synonym: "r 7 anatomical structure formation" EXACT [OBOL:automatic] synonym: "r 7 formation" EXACT [OBOL:automatic] synonym: "r 7 formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021673: 9.72 ! parse: GO:0021674 using "rhombomere 8 morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0000153]) [-2] ! parse: GO:0021674 using "rhombomere 8 morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(8, anatomy), OBO_REL:unfolds_in=ZFA:0001064]) [-3] ! no existing xp def ! def: "The process by which the anatomical structure of rhombomere 8 is generated and organized. Morphogenesis pertains to the creation of form. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in an anterior to posterior order." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of rhombomere 8 [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0000153])] [Term] id: GO:0021674 ! rhombomere 8 morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0000153 ! rhombomere 8 synonym: "r 8 anatomical structure morphogenesis" EXACT [OBOL:automatic] synonym: "r 8 morphogenesis" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021674: 9.65 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0021675 using "nerve development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00005105]) [-2] ! parse: GO:0021675 using "nerve development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000217]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of a nerve over time, from its formation to the mature structure." ! PROPOSED: developmental process that results_in_complete_developmental_of nerve [cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000217])] [Term] id: GO:0021675 ! nerve development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of MA:0000217 ! nerve ! seconds spent parsing GO:0021675: 0.06 ! parse: GO:0021676 using "rhombomere 8 structural organization" => cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=ZFA:0000153]) [-2] ! parse: GO:0021676 using "rhombomere 8 structural organization" => cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=anon(8, anatomy), OBO_REL:unfolds_in=ZFA:0001064]) [-3] ! no existing xp def ! def: "The process that contributes to creating the structural organization of rhombomere 8. This process pertains to the physical shaping of a rudimentary structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in an anterior to posterior order." ! PROPOSED: organization of an anatomical structure that OBO_REL:results_in_developmental_progression_of rhombomere 8 [cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=ZFA:0000153])] [Term] id: GO:0021676 ! rhombomere 8 structural organization intersection_of: GO:0048532 ! organization of an anatomical structure intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0000153 ! rhombomere 8 synonym: "r 8 anatomical structure organization" EXACT [OBOL:automatic] synonym: "r 8 organization of an anatomical structure" EXACT [OBOL:automatic] synonym: "r 8 structural organization" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021676: 9.68 ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0021677 using "rhombomere 8 formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=ZFA:0000153]) [-2] ! parse: GO:0021677 using "rhombomere 8 formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0000153]) [-2] ! parse: GO:0021677 using "rhombomere 8 formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(8, anatomy), OBO_REL:unfolds_in=ZFA:0001064]) [-3] ! no existing xp def ! def: "The process that gives rise to rhombomere 8. This process pertains to the initial formation of a structure from unspecified parts. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of rhombomere 8 [cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0000153])] [Term] id: GO:0021677 ! rhombomere 8 formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of ZFA:0000153 ! rhombomere 8 synonym: "r 8 anatomical structure formation" EXACT [OBOL:automatic] synonym: "r 8 formation" EXACT [OBOL:automatic] synonym: "r 8 formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021677: 9.72 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0021678 using "third ventricle development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000182]) [-2] ! parse: GO:0021678 using "third ventricle development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000161]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the third ventricle over time, from its formation to the mature structure. The third ventricle is the narrow cleft inferior to the corpus callosum, within the diencephalon, between the paired thalami. Its floor is formed by the hypothalamus, its anterior wall by the lamina terminalis, and its roof by ependyma, and it communicates with the fourth ventricle by the cerebral aqueduct, and with the lateral ventricles by the interventricular foramina." ! PROPOSED: developmental process that results_in_complete_developmental_of third ventricle [cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000161])] [Term] id: GO:0021678 ! third ventricle development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of ZFA:0000161 ! third ventricle synonym: "3 rd ventricle development" EXACT [OBOL:automatic] synonym: "diencephalic ventricle development" EXACT [OBOL:automatic] synonym: "diencephalic vesicle development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021678: 5.37 ! parse: GO:0021682 using "nerve maturation" => cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=FBbt:00005105]) [-2] ! parse: GO:0021682 using "nerve maturation" => cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=MA:0000217]) [-2] ! no existing xp def ! def: "A developmental process, independent of morphogenetic (shape) change, that is required for a nerve to attain its fully functional state." ! PROPOSED: developmental maturation that OBO_REL:results_in_developmental_progression_of nerve [cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=MA:0000217])] [Term] id: GO:0021682 ! nerve maturation intersection_of: GO:0021700 ! developmental maturation intersection_of: OBO_REL:results_in_developmental_progression_of MA:0000217 ! nerve ! seconds spent parsing GO:0021682: 0.07 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0021695 using "cerebellar cortex development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000199]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the cerebellar cortex over time, from its formation to the mature structure. The cerebellar cortex is a thin mantle of gray matter that covers the surface of each cerebral hemisphere. It has a characteristic morphology with convolutions (gyri) and crevices (sulci) that have specific functions. Six layers of nerve cells and the nerve pathways that connect them comprise the cerebellar cortex. Together, these regions are responsible for the processes of conscious thought, perception, emotion and memory as well as advanced motor function." ! PROPOSED: developmental process that results_in_complete_developmental_of cerebellar cortex [cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000199])] [Term] id: GO:0021695 ! cerebellar cortex development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of MA:0000199 ! cerebellar cortex ! seconds spent parsing GO:0021695: 4.73 ! parse: GO:0021696 using "cerebellar cortex morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000199]) [-2] ! no existing xp def ! def: "The process by which the anatomical structure of the cranial nerves are generated and organized. Morphogenesis pertains to the creation of form. The cerebellar cortex is a thin mantle of gray matter that covers the surface of each cerebral hemisphere. It has a characteristic morphology with convolutions (gyri) and crevices (sulci) that have specific functions. Six layers of nerve cells and the nerve pathways that connect them comprise the cerebellar cortex. Together, these regions are responsible for the processes of conscious thought, perception, emotion and memory as well as advanced motor function." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of cerebellar cortex [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000199])] [Term] id: GO:0021696 ! cerebellar cortex morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of MA:0000199 ! cerebellar cortex ! seconds spent parsing GO:0021696: 5.19 ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0021697 using "cerebellar cortex formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=MA:0000199]) [-2] ! parse: GO:0021697 using "cerebellar cortex formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=MA:0000199]) [-2] ! no existing xp def ! def: "The process that gives rise to the cerebellar cortex. This process pertains to the initial formation of a structure from unspecified parts. The cerebellar cortex is a thin mantle of gray matter that covers the surface of each cerebral hemisphere. It has a characteristic morphology with convolutions (gyri) and crevices (sulci) that have specific functions. Six layers of nerve cells and the nerve pathways that connect them comprise the cerebellar cortex. Together, these regions are responsible for the processes of conscious thought, perception, emotion and memory as well as advanced motor function." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of cerebellar cortex [cdef(GO:0048646, [OBO_REL:results_in_formation_of=MA:0000199])] [Term] id: GO:0021697 ! cerebellar cortex formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of MA:0000199 ! cerebellar cortex ! seconds spent parsing GO:0021697: 5.19 ! parse: GO:0021698 using "cerebellar cortex structural organization" => cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=MA:0000199]) [-2] ! no existing xp def ! def: "The process that contributes to the act of creating the structural organization of the cerebellar cortex. This process pertains to the physical shaping of a rudimentary structure. The cerebellar cortex is a thin mantle of gray matter that covers the surface of each cerebral hemisphere. It has a characteristic morphology with convolutions (gyri) and crevices (sulci) that have specific functions. Six layers of nerve cells and the nerve pathways that connect them comprise the cerebellar cortex. Together, these regions are responsible for the processes of conscious thought, perception, emotion and memory as well as advanced motor function." ! PROPOSED: organization of an anatomical structure that OBO_REL:results_in_developmental_progression_of cerebellar cortex [cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=MA:0000199])] [Term] id: GO:0021698 ! cerebellar cortex structural organization intersection_of: GO:0048532 ! organization of an anatomical structure intersection_of: OBO_REL:results_in_developmental_progression_of MA:0000199 ! cerebellar cortex ! seconds spent parsing GO:0021698: 5.15 ! parse: GO:0021699 using "cerebellar cortex maturation" => cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=MA:0000199]) [-2] ! no existing xp def ! def: "A developmental process, independent of morphogenetic (shape) change, that is required for the cerebellar cortex to attain its fully functional state. The cerebellar cortex is a thin mantle of gray matter that covers the surface of each cerebral hemisphere. It has a characteristic morphology with convolutions (gyri) and crevices (sulci) that have specific functions. Six layers of nerve cells and the nerve pathways that connect them comprise the cerebellar cortex. Together, these regions are responsible for the processes of conscious thought, perception, emotion and memory as well as advanced motor function." ! PROPOSED: developmental maturation that OBO_REL:results_in_developmental_progression_of cerebellar cortex [cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=MA:0000199])] [Term] id: GO:0021699 ! cerebellar cortex maturation intersection_of: GO:0021700 ! developmental maturation intersection_of: OBO_REL:results_in_developmental_progression_of MA:0000199 ! cerebellar cortex ! seconds spent parsing GO:0021699: 4.72 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0021703 using "locus caeruleus development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(locus caeruleus, anatomy)]) [-16] ! parse: GO:0021703 using "locus ceruleus development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(locus ceruleus, anatomy)]) [-15] ! parse: GO:0021703 using "locus coeruleus development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0001017]) [-2] ! parse: GO:0021703 using "locus coeruleus development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000539]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the locus ceruleus over time, from its formation to the mature structure. The locus ceruleus is a dense cluster of neurons within the dorsorostral pons. This nucleus is the major location of neurons that release norepinephrine throughout the brain, and is responsible for physiological responses to stress and panic." ! PROPOSED: developmental process that results_in_complete_developmental_of locus coeruleus [cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000539])] [Term] id: GO:0021703 ! locus ceruleus development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of ZFA:0000539 ! locus coeruleus ! seconds spent parsing GO:0021703: 13.62 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0021713 using "inferior olivary nucleus development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(inferior olivary nucleus, anatomy)]) [-25] ! parse: GO:0021713 using "inferior olive development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0001040]) [-2] ! parse: GO:0021713 using "inferior olive development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000215]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the inferior olivary nucleus over time, from its formation to the mature structure. The inferior olivary nucleus is a capsule-shaped structure in the ventral medulla located just lateral and dorsal to the medullary pyramids. Neurons in the inferior olivary nucleus are the source of climbing fiber input to the cerebellar cortex; these neurons have been implicated in various functions, such as learning and timing of movements." ! PROPOSED: developmental process that results_in_complete_developmental_of inferior olive [cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000215])] [Term] id: GO:0021713 ! inferior olivary nucleus development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of ZFA:0000215 ! inferior olive ! seconds spent parsing GO:0021713: 9.61 ! parse: GO:0021714 using "inferior olivary nucleus morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(inferior olivary nucleus, anatomy)]) [-25] ! parse: GO:0021714 using "inferior olive morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0001040]) [-2] ! parse: GO:0021714 using "inferior olive morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0000215]) [-2] ! no existing xp def ! def: "The process by which the anatomical structure of the inferior olivary nucleus is generated and organized. Morphogenesis pertains to the creation of form. The inferior olivary nucleus is a capsule-shaped structure in the ventral medulla located just lateral and dorsal to the medullary pyramids. Neurons in the inferior olivary nucleus are the source of climbing fiber input to the cerebellar cortex; these neurons have been implicated in various functions, such as learning and timing of movements." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of inferior olive [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0000215])] [Term] id: GO:0021714 ! inferior olivary nucleus morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0000215 ! inferior olive ! seconds spent parsing GO:0021714: 10.5 ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0021715 using "inferior olivary nucleus formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(inferior olivary nucleus, anatomy)]) [-25] ! parse: GO:0021715 using "inferior olive biosynthesis" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=MA:0001040]) [-2] ! parse: GO:0021715 using "inferior olive biosynthesis" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=ZFA:0000215]) [-2] ! parse: GO:0021715 using "inferior olive formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=MA:0001040]) [-2] ! parse: GO:0021715 using "inferior olive formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=ZFA:0000215]) [-2] ! parse: GO:0021715 using "inferior olive formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=MA:0001040]) [-2] ! parse: GO:0021715 using "inferior olive formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0000215]) [-2] ! no existing xp def ! def: "The process that gives rise to the inferior olivary nucleus. This process pertains to the initial formation of a structure from unspecified parts. The inferior olivary nucleus is a capsule-shaped structure in the ventral medulla located just lateral and dorsal to the medullary pyramids. Neurons in the inferior olivary nucleus are the source of climbing fiber input to the cerebellar cortex; these neurons have been implicated in various functions, such as learning and timing of movements." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of inferior olive [cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0000215])] [Term] id: GO:0021715 ! inferior olivary nucleus formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of ZFA:0000215 ! inferior olive ! seconds spent parsing GO:0021715: 16.81 ! parse: GO:0021716 using "inferior olivary nucleus structural organization" => cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=anon(inferior olivary nucleus, anatomy)]) [-25] ! parse: GO:0021716 using "inferior olive structural organization" => cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=MA:0001040]) [-2] ! parse: GO:0021716 using "inferior olive structural organization" => cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=ZFA:0000215]) [-2] ! no existing xp def ! def: "The process that contributes to the act of creating the structural organization of the inferior olivary nucleus structure. The inferior olivary nucleus is a capsule-shaped structure in the ventral medulla located just lateral and dorsal to the medullary pyramids. Neurons in the inferior olivary nucleus are the source of climbing fiber input to the cerebellar cortex; these neurons have been implicated in various functions, such as learning and timing of movements." ! PROPOSED: organization of an anatomical structure that OBO_REL:results_in_developmental_progression_of inferior olive [cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=ZFA:0000215])] [Term] id: GO:0021716 ! inferior olivary nucleus structural organization intersection_of: GO:0048532 ! organization of an anatomical structure intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0000215 ! inferior olive ! seconds spent parsing GO:0021716: 10.55 ! parse: GO:0021717 using "inferior olive maturation" => cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=MA:0001040]) [-2] ! parse: GO:0021717 using "inferior olive maturation" => cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=ZFA:0000215]) [-2] ! no existing xp def ! def: "A developmental process, independent of morphogenetic (shape) change, that is required for the inferior olivary nucleus to attain its fully functional state. The inferior olivary nucleus is a capsule-shaped structure in the ventral medulla located just lateral and dorsal to the medullary pyramids. Neurons in the inferior olivary nucleus are the source of climbing fiber input to the cerebellar cortex; these neurons have been implicated in various functions, such as learning and timing of movements." ! PROPOSED: developmental maturation that OBO_REL:results_in_developmental_progression_of inferior olive [cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=ZFA:0000215])] [Term] id: GO:0021717 ! inferior olivary nucleus maturation intersection_of: GO:0021700 ! developmental maturation intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0000215 ! inferior olive ! seconds spent parsing GO:0021717: 9.56 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0021718 using "superior olivary nucleus development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0001026]) [-2] ! parse: GO:0021718 using "superior olive development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0001026]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the superior olivary nucleus over time, from its formation to the mature structure. In mice, the superior olivary nucleus is a small cylindrical mass on the dorsal surface of the lateral part of the trapezoid body of the pons, and it is situated immediately above the inferior olivary nucleus. It receives projections from the cochlear nucleus and thus is involved in the perception of sound." ! PROPOSED: developmental process that results_in_complete_developmental_of superior olivary nucleus [cdef(GO:0032502, [results_in_complete_developmental_of=MA:0001026])] [Term] id: GO:0021718 ! superior olivary nucleus development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of MA:0001026 ! superior olivary nucleus ! seconds spent parsing GO:0021718: 9.42 ! parse: GO:0021719 using "superior olivary nucleus morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0001026]) [-2] ! parse: GO:0021719 using "superior olive morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0001026]) [-2] ! no existing xp def ! def: "The process by which the anatomical structure of the superior olivary nucleus is generated and organized. Morphogenesis pertains to the creation of form. In mice, the superior olivary nucleus is a small cylindrical mass on the dorsal surface of the lateral part of the trapezoid body of the pons, and it is situated immediately above the inferior olivary nucleus. It receives projections from the cochlear nucleus and thus is involved in the perception of sound." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of superior olivary nucleus [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0001026])] [Term] id: GO:0021719 ! superior olivary nucleus morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of MA:0001026 ! superior olivary nucleus ! seconds spent parsing GO:0021719: 10.28 ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0021720 using "superior olivary nucleus formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=MA:0001026]) [-2] ! parse: GO:0021720 using "superior olivary nucleus formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=MA:0001026]) [-2] ! no existing xp def ! def: "The process that gives rise to the superior olivary nucleus. This process pertains to the initial formation of a structure from unspecified parts. In mice, the superior olivary nucleus is a small cylindrical mass on the dorsal surface of the lateral part of the trapezoid body of the pons, and it is situated immediately above the inferior olivary nucleus. It receives projections from the cochlear nucleus and thus is involved in the perception of sound." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of superior olivary nucleus [cdef(GO:0048646, [OBO_REL:results_in_formation_of=MA:0001026])] [Term] id: GO:0021720 ! superior olivary nucleus formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of MA:0001026 ! superior olivary nucleus ! seconds spent parsing GO:0021720: 5.2 ! parse: GO:0021721 using "superior olivary nucleus structural organization" => cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=MA:0001026]) [-2] ! no existing xp def ! def: "The process that contributes to the act of creating the structural organization of the superior olivary nucleus structure. In mice, the superior olivary nucleus is a small cylindrical mass on the dorsal surface of the lateral part of the trapezoid body of the pons, and it is situated immediately above the inferior olivary nucleus. It receives projections from the cochlear nucleus and thus is involved in the perception of sound." ! PROPOSED: organization of an anatomical structure that OBO_REL:results_in_developmental_progression_of superior olivary nucleus [cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=MA:0001026])] [Term] id: GO:0021721 ! superior olivary nucleus structural organization intersection_of: GO:0048532 ! organization of an anatomical structure intersection_of: OBO_REL:results_in_developmental_progression_of MA:0001026 ! superior olivary nucleus ! seconds spent parsing GO:0021721: 5.16 ! parse: GO:0021722 using "superior olivary nucleus maturation" => cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=MA:0001026]) [-2] ! parse: GO:0021722 using "superior olive maturation" => cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=MA:0001026]) [-2] ! no existing xp def ! def: "A developmental process, independent of morphogenetic (shape) change, that is required for the superior olivary nucleus to attain its fully functional state. The superior olivary nucleus is a small cylindrical mass on the dorsal surface of the lateral part of the trapezoid body of the pons, and it is situated immediately above the inferior olivary nucleus. It receives projections from the cochlear nucleus and thus is involved in the perception of sound." ! PROPOSED: developmental maturation that OBO_REL:results_in_developmental_progression_of superior olivary nucleus [cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=MA:0001026])] [Term] id: GO:0021722 ! superior olivary nucleus maturation intersection_of: GO:0021700 ! developmental maturation intersection_of: OBO_REL:results_in_developmental_progression_of MA:0001026 ! superior olivary nucleus ! seconds spent parsing GO:0021722: 9.45 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0021724 using "inferior raphe nucleus development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000366]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the inferior raphe nucleus over time, from its formation to the mature structure." ! PROPOSED: developmental process that results_in_complete_developmental_of inferior raphe nucleus [cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000366])] [Term] id: GO:0021724 ! inferior raphe nucleus development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of ZFA:0000366 ! inferior raphe nucleus synonym: "posterior raphe nucleus development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021724: 4.79 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0021725 using "superior raphe nucleus development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000440]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the superior raphe nucleus over time, from its formation to the mature structure." ! PROPOSED: developmental process that results_in_complete_developmental_of superior raphe nucleus [cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000440])] [Term] id: GO:0021725 ! superior raphe nucleus development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of ZFA:0000440 ! superior raphe nucleus synonym: "anterior raphe nucleus development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021725: 4.81 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0021726 using "lateral reticular nucleus development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0001047]) [-2] ! parse: GO:0021726 using "lateral reticular nucleus development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000535]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the lateral reticular nucleus over time, from its formation to the mature structure." ! PROPOSED: developmental process that results_in_complete_developmental_of lateral reticular nucleus [cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000535])] [Term] id: GO:0021726 ! lateral reticular nucleus development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of ZFA:0000535 ! lateral reticular nucleus ! seconds spent parsing GO:0021726: 5.66 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0021727 using "intermediate reticular formation development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000219]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the intermediate reticular formation over time, from its formation to the mature structure." ! PROPOSED: developmental process that results_in_complete_developmental_of intermediate reticular formation [cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000219])] [Term] id: GO:0021727 ! intermediate reticular formation development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of ZFA:0000219 ! intermediate reticular formation ! seconds spent parsing GO:0021727: 4.76 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0021728 using "inferior reticular formation development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000523]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the inferior reticular formation over time, from its formation to the mature structure." ! PROPOSED: developmental process that results_in_complete_developmental_of inferior reticular formation [cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000523])] [Term] id: GO:0021728 ! inferior reticular formation development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of ZFA:0000523 ! inferior reticular formation ! seconds spent parsing GO:0021728: 4.75 ! parse: GO:0021732 using "MHB maturation" => cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=ZFA:0001187]) [-2] ! parse: GO:0021732 using "isthmus maturation" => cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=ZFA:0000042]) [-2] ! no existing xp def ! def: "A developmental process, independent of morphogenetic (shape) change, that is required for the midbrain-hindbrain boundary to attain its fully functional state. The midbrain-hindbrain domain of the embryonic brain is comprised of the mesencephalic vesicle and the first rhombencephalic vesicle at early somitogenesis stages. An organizing center at the boundary patterns the midbrain and hindbrain primordia of the neural plate." ! PROPOSED: developmental maturation that OBO_REL:results_in_developmental_progression_of presumptive midbrain hindbrain boundary [cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=ZFA:0001187])] [Term] id: GO:0021732 ! midbrain-hindbrain boundary maturation intersection_of: GO:0021700 ! developmental maturation intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0001187 ! presumptive midbrain hindbrain boundary synonym: "presumptive midbrain hindbrain boundary developmental maturation" EXACT [OBOL:automatic] synonym: "presumptive midbrain hindbrain boundary maturation" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021732: 19.32 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0021733 using "PLLN development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(PLLN, anatomy)]) [-5] ! parse: GO:0021733 using "caudal lateral line nerve development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000175]) [-2] ! parse: GO:0021733 using "posterior lateral line nerve development" => cdef(GO:0021675, [OBO_REL:results_in_developmental_progression_of=ZFA:0000944]) [-2] ! parse: GO:0021733 using "posterior lateral line nerve development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=FBbt:00005105, OBO_REL:unfolds_in=ZFA:0000944]) [-3] ! parse: GO:0021733 using "posterior lateral line nerve development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=MA:0000217, OBO_REL:unfolds_in=ZFA:0000944]) [-3] ! parse: GO:0021733 using "posterior lateral line nerve development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00005105, OBO_REL:unfolds_in=ZFA:0000944]) [-3] ! parse: GO:0021733 using "posterior lateral line nerve development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000217, OBO_REL:unfolds_in=ZFA:0000944]) [-3] ! parse: GO:0021733 using "posterior lateral line nerve development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000175]) [-2] ! parse: GO:0021733 using "posterior lateral line nerve development" => cdef(GO:0032502, [results_in_complete_developmental_of=cell:posterior_lateral_line_nerve]) [-2] ! parse: GO:0021733 using "posterior lateral line nerve development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(FBbt:00005105, [OBO_REL:part_of=ZFA:0000944])]) [-3] ! parse: GO:0021733 using "posterior lateral line nerve development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(MA:0000217, [OBO_REL:part_of=ZFA:0000944])]) [-3] ! no existing xp def ! def: "The progression of the caudal lateral line nerve over time from its initial formation until its mature state. The caudal lateral line nerve is a sensory afferent projecting from the posterior lateral line ganglion to the hindbrain in fishes." ! PROPOSED: developmental process that results_in_complete_developmental_of posterior lateral line nerve [cdef(GO:0032502, [results_in_complete_developmental_of=cell:posterior_lateral_line_nerve])] [Term] id: GO:0021733 ! caudal lateral line nerve development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of cell:posterior_lateral_line_nerve ! posterior lateral line nerve ! seconds spent parsing GO:0021733: 18.42 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0021734 using "ALLN development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(ALLN, anatomy)]) [-5] ! parse: GO:0021734 using "anterior lateral line nerve development" => cdef(GO:0021675, [OBO_REL:results_in_developmental_progression_of=ZFA:0001470]) [-2] ! parse: GO:0021734 using "anterior lateral line nerve development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=FBbt:00005105, OBO_REL:unfolds_in=ZFA:0001470]) [-3] ! parse: GO:0021734 using "anterior lateral line nerve development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=MA:0000217, OBO_REL:unfolds_in=ZFA:0001470]) [-3] ! parse: GO:0021734 using "anterior lateral line nerve development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00005105, OBO_REL:unfolds_in=ZFA:0001470]) [-3] ! parse: GO:0021734 using "anterior lateral line nerve development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000217, OBO_REL:unfolds_in=ZFA:0001470]) [-3] ! parse: GO:0021734 using "anterior lateral line nerve development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000425]) [-2] ! parse: GO:0021734 using "anterior lateral line nerve development" => cdef(GO:0032502, [results_in_complete_developmental_of=cell:anterior_lateral_line_nerve]) [-2] ! parse: GO:0021734 using "anterior lateral line nerve development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(FBbt:00005105, [OBO_REL:part_of=ZFA:0001470])]) [-3] ! parse: GO:0021734 using "anterior lateral line nerve development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(MA:0000217, [OBO_REL:part_of=ZFA:0001470])]) [-3] ! parse: GO:0021734 using "rostral lateral line nerve development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000425]) [-2] ! no existing xp def ! def: "The progression of the rostral lateral line nerve over time from its initial formation until its mature state. The rostral lateral line nerve is a sensory afferent projecting from the anterior lateral line ganglion to the hindbrain in fishes." ! PROPOSED: developmental process that results_in_complete_developmental_of anterior lateral line nerve [cdef(GO:0032502, [results_in_complete_developmental_of=cell:anterior_lateral_line_nerve])] [Term] id: GO:0021734 ! rostral lateral line nerve development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of cell:anterior_lateral_line_nerve ! anterior lateral line nerve ! seconds spent parsing GO:0021734: 18.27 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0021735 using "dentate nucleus development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0001008]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the dentate nucleus over time, from its formation to the mature structure." ! PROPOSED: developmental process that results_in_complete_developmental_of lateral cerebellar nucleus [cdef(GO:0032502, [results_in_complete_developmental_of=MA:0001008])] [Term] id: GO:0021735 ! dentate nucleus development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of MA:0001008 ! lateral cerebellar nucleus synonym: "lateral cerebellar nucleus development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021735: 4.73 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0021738 using "fastigial nucleus development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0001009]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the fastigial nucleus over time, from its formation to the mature structure." ! PROPOSED: developmental process that results_in_complete_developmental_of medial cerebellar nucleus [cdef(GO:0032502, [results_in_complete_developmental_of=MA:0001009])] [Term] id: GO:0021738 ! fastigial nucleus development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of MA:0001009 ! medial cerebellar nucleus synonym: "medial cerebellar nucleus development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021738: 4.73 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0021740 using "pontine nucleus development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0001021]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the pontine nucleus over time, from its formation to the mature structure." ! PROPOSED: developmental process that results_in_complete_developmental_of pontine nucleus [cdef(GO:0032502, [results_in_complete_developmental_of=MA:0001021])] [Term] id: GO:0021740 ! pontine nucleus development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of MA:0001021 ! pontine nucleus ! seconds spent parsing GO:0021740: 4.72 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0021741 using "spinal trigeminal nucleus development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0001053]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the spinal trigeminal nucleus over time, from its formation to the mature structure." ! PROPOSED: developmental process that results_in_complete_developmental_of trigeminal V spinal sensory nucleus [cdef(GO:0032502, [results_in_complete_developmental_of=MA:0001053])] [Term] id: GO:0021741 ! spinal trigeminal nucleus development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of MA:0001053 ! trigeminal V spinal sensory nucleus synonym: "trigeminal V spinal sensory nucleus development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021741: 4.74 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0021745 using "nucleus ambiguus development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0001050]) [-2] ! parse: GO:0021745 using "nucleus ambiguus development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(ambiguus, anatomy), OBO_REL:unfolds_in=GO:0005634]) [-10] ! no existing xp def ! def: "The process whose specific outcome is the progression of the nucleus ambiguus over time, from its formation to the mature structure." ! PROPOSED: developmental process that results_in_complete_developmental_of nucleus ambiguus [cdef(GO:0032502, [results_in_complete_developmental_of=MA:0001050])] [Term] id: GO:0021745 ! nucleus ambiguus development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of MA:0001050 ! nucleus ambiguus ! seconds spent parsing GO:0021745: 10.04 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0021747 using "cochlear nucleus development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(cochlear nucleus, anatomy)]) [-17] ! no existing xp def ! def: "The process whose specific outcome is the progression of the cochlear nucleus over time, from its formation to the mature structure." ! PROPOSED: developmental process that results_in_complete_developmental_of anon(cochlear nucleus, anatomy) [cdef(GO:0032502, [results_in_complete_developmental_of=anon(cochlear nucleus, anatomy)])] [Term] id: GO:0021747 ! cochlear nucleus development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of anatomy:cochlear_nucleus ! seconds spent parsing GO:0021747: 4.27 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0021749 using "ventral cochlear nucleus development" => cdef(GO:0021747, [OBO_REL:results_in_developmental_progression_of=anon(ventral, anatomy)]) [-8] ! parse: GO:0021749 using "ventral cochlear nucleus development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(ventral cochlear nucleus, anatomy)]) [-25] ! no existing xp def ! def: "The process whose specific outcome is the progression of the ventral cochlear nucleus over time, from its formation to the mature structure." ! PROPOSED: cochlear nucleus development that OBO_REL:results_in_developmental_progression_of anon(ventral, anatomy) [cdef(GO:0021747, [OBO_REL:results_in_developmental_progression_of=anon(ventral, anatomy)])] [Term] id: GO:0021749 ! ventral cochlear nucleus development intersection_of: GO:0021747 ! cochlear nucleus development intersection_of: OBO_REL:results_in_developmental_progression_of anatomy:ventral ! seconds spent parsing GO:0021749: 4.66 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0021751 using "salivary nucleus development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(salivary nucleus, anatomy)]) [-17] ! no existing xp def ! def: "The process whose specific outcome is the progression of the salivary nucleus over time, from its formation to the mature structure." ! PROPOSED: developmental process that results_in_complete_developmental_of anon(salivary nucleus, anatomy) [cdef(GO:0032502, [results_in_complete_developmental_of=anon(salivary nucleus, anatomy)])] [Term] id: GO:0021751 ! salivary nucleus development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of anatomy:salivary_nucleus ! seconds spent parsing GO:0021751: 4.25 ! Already have xp for: GO:0021755 eurydendroid cell differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of eurydendroid cell [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000253])] ! No relation defined: results_in_complete_developmental_of ! parse: GO:0021756 using "striatum development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000891]) [-2] ! no existing xp def ! def: "The progression of the striatum over time from its initial formation until its mature state. The striatum is a large cluster of dopaminergic nerve cells, consisting of the caudate nucleus and the putamen, that controls movement, balance, and walking." ! PROPOSED: developmental process that results_in_complete_developmental_of striatum [cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000891])] [Term] id: GO:0021756 ! striatum development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of MA:0000891 ! striatum synonym: "corpus striatum development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021756: 4.67 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0021757 using "caudate nucleus development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000894]) [-2] ! no existing xp def ! def: "The progression of the caudate nucleus over time from its initial formation until its mature state. The caudate nucleus is the C-shaped structures of the striatum containing input neurons involved with control of voluntary movement in the brain." ! PROPOSED: developmental process that results_in_complete_developmental_of caudate nucleus [cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000894])] [Term] id: GO:0021757 ! caudate nucleus development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of MA:0000894 ! caudate nucleus ! seconds spent parsing GO:0021757: 4.73 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0021758 using "putamen development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000895]) [-2] ! no existing xp def ! def: "The progression of the putamen over time from its initial formation until its mature state. The putamen is the lens-shaped basal ganglion involved with control of voluntary movement in the brain." ! PROPOSED: developmental process that results_in_complete_developmental_of putamen [cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000895])] [Term] id: GO:0021758 ! putamen development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of MA:0000895 ! putamen ! seconds spent parsing GO:0021758: 4.69 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0021759 using "globus pallidus development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000890]) [-2] ! parse: GO:0021759 using "pallidum development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000889]) [-2] ! no existing xp def ! def: "The progression of the globus pallidus over time from its initial formation until its mature state. The globus pallidus is one of the basal ganglia involved with control of voluntary movement in the brain." ! PROPOSED: developmental process that results_in_complete_developmental_of globus pallidus [cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000890])] [Term] id: GO:0021759 ! globus pallidus development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of MA:0000890 ! globus pallidus ! seconds spent parsing GO:0021759: 9.36 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0021761 using "limbic system development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(limbic system, anatomy)]) [-14] ! parse: GO:0021761 using "limbic system development" => cdef(GO:0048731, [OBO_REL:results_in_developmental_progression_of=anon(limbic, anatomy)]) [-7] ! no existing xp def ! def: "The progression of the limbic system over time from its initial formation until its mature state. The limbic system is a collection of structures in the brain involved in emotion, motivation and emotional aspects of memory." ! PROPOSED: system development that OBO_REL:results_in_developmental_progression_of anon(limbic, anatomy) [cdef(GO:0048731, [OBO_REL:results_in_developmental_progression_of=anon(limbic, anatomy)])] [Term] id: GO:0021761 ! limbic system development intersection_of: GO:0048731 ! system development intersection_of: OBO_REL:results_in_developmental_progression_of anatomy:limbic ! seconds spent parsing GO:0021761: 4.24 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0021762 using "substantia nigra development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000210]) [-2] ! no existing xp def ! def: "The progression of the substantia nigra over time from its initial formation until its mature state. The substantia nigra is the layer of gray substance that separates the posterior parts of the cerebral peduncles (tegmentum mesencephali) from the anterior parts; it normally includes a posterior compact part with many pigmented cells (pars compacta) and an anterior reticular part whose cells contain little pigment (pars reticularis)." ! PROPOSED: developmental process that results_in_complete_developmental_of substantia nigra [cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000210])] [Term] id: GO:0021762 ! substantia nigra development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of MA:0000210 ! substantia nigra ! seconds spent parsing GO:0021762: 4.69 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0021763 using "corpus luysi development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(corpus luysi, anatomy)]) [-13] ! parse: GO:0021763 using "subthalamic nucleus development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000877]) [-2] ! no existing xp def ! def: "The progression of the subthalamic nucleus over time from its initial formation until its mature state. The subthalamic nucleus is the lens-shaped nucleus located in the ventral part of the subthalamus on the inner aspect of the internal capsule that is concerned with the integration of somatic motor function." ! PROPOSED: developmental process that results_in_complete_developmental_of subthalamic nucleus [cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000877])] [Term] id: GO:0021763 ! subthalamic nucleus development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of MA:0000877 ! subthalamic nucleus ! seconds spent parsing GO:0021763: 8.86 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0021764 using "amygdala development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000887]) [-2] ! no existing xp def ! def: "The progression of the amygdala over time from its initial formation until its mature state. The amygdala is an almond shaped set of neurons in the medial temporal lobe of the brain that play a key role in processing emotions such as fear and pleasure." ! PROPOSED: developmental process that results_in_complete_developmental_of amygdala [cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000887])] [Term] id: GO:0021764 ! amygdala development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of MA:0000887 ! amygdala synonym: "amygdaloid area development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021764: 4.69 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0021766 using "hippocampus development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000191]) [-2] ! no existing xp def ! def: "The progression of the hippocampus over time from its initial formation until its mature state." ! PROPOSED: developmental process that results_in_complete_developmental_of hippocampus [cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000191])] [Term] id: GO:0021766 ! hippocampus development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of MA:0000191 ! hippocampus synonym: "ammon ' s horn development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021766: 4.72 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0021767 using "mammilary body development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(mammilary body, anatomy)]) [-15] ! parse: GO:0021767 using "mammillary body development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000174]) [-2] ! no existing xp def ! def: "The progression of the mammilary body over time from its initial formation until its mature state. The mammilary body is a protrusion at the posterior end of the hypothalamus that contains hypothalamic nuclei." ! PROPOSED: developmental process that results_in_complete_developmental_of mammillary body [cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000174])] [Term] id: GO:0021767 ! mammilary body development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of MA:0000174 ! mammillary body ! seconds spent parsing GO:0021767: 8.97 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0021768 using "accumbens nucleus development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000892]) [-2] ! parse: GO:0021768 using "nucleus accumbens development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000892]) [-2] ! parse: GO:0021768 using "nucleus accumbens development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(accumbens, anatomy), OBO_REL:unfolds_in=GO:0005634]) [-11] ! no existing xp def ! def: "The progression of the nucleus accumbens over time from its initial formation until its mature state. The nucleus accumbens is a collection of pleomorphic cells in the caudal part of the anterior horn of the lateral ventricle, in the region of the olfactory tubercle, lying between the head of the caudate nucleus and the anterior perforated substance. It is part of the ventral striatum, a composite structure considered part of the basal ganglia." ! PROPOSED: developmental process that results_in_complete_developmental_of accumbens nucleus [cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000892])] [Term] id: GO:0021768 ! nucleus accumbens development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of MA:0000892 ! accumbens nucleus ! seconds spent parsing GO:0021768: 14.75 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0021769 using "orbitofrontal cortex development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(orbitofrontal cortex, anatomy)]) [-21] ! no existing xp def ! def: "The progression of the orbitofrontal cortex over time from its initial formation until its mature state. The orbitofrontal cortex is a cerebral cortex region located in the frontal lobe." ! PROPOSED: developmental process that results_in_complete_developmental_of anon(orbitofrontal cortex, anatomy) [cdef(GO:0032502, [results_in_complete_developmental_of=anon(orbitofrontal cortex, anatomy)])] [Term] id: GO:0021769 ! orbitofrontal cortex development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of anatomy:orbitofrontal_cortex ! seconds spent parsing GO:0021769: 4.25 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0021771 using "LGN development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(LGN, anatomy)]) [-4] ! parse: GO:0021771 using "lateral geniculate nucleus development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000869]) [-2] ! no existing xp def ! def: "The progression of the lateral geniculate nucleus over time from its initial formation until its mature state. The lateral geniculate nucleus is the primary processor of visual information received from the retina." ! PROPOSED: developmental process that results_in_complete_developmental_of lateral geniculate nucleus [cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000869])] [Term] id: GO:0021771 ! lateral geniculate nucleus development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of MA:0000869 ! lateral geniculate nucleus ! seconds spent parsing GO:0021771: 9.1 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0021772 using "olfactory bulb development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000194]) [-2] ! parse: GO:0021772 using "olfactory bulb development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000402]) [-2] ! no existing xp def ! def: "The progression of the olfactory bulb over time from its initial formation until its mature state. The olfactory bulb coordinates neuronal signaling involved in the perception of smell. It receives input from the sensory neurons and outputs to the olfactory cortex." ! PROPOSED: developmental process that results_in_complete_developmental_of olfactory bulb [cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000402])] [Term] id: GO:0021772 ! olfactory bulb development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of ZFA:0000402 ! olfactory bulb ! seconds spent parsing GO:0021772: 5.34 ! Already have xp for: GO:0021777 BMP signaling pathway involved in spinal cord association neuron specification ! CURRENT : BMP signaling pathway that OBO_REL:part_of spinal cord association neuron specification [cdef(GO:0030509, [OBO_REL:part_of=GO:0021519])] ! Already have xp for: GO:0021778 oligodendrocyte cell fate specification ! CURRENT : cell fate specification that OBO_REL:results_in_specification_of oligodendrocyte [cdef(GO:0001708, [OBO_REL:results_in_specification_of=CL:0000128])] ! Already have xp for: GO:0021779 oligodendrocyte cell fate commitment ! CURRENT : cell fate commitment that OBO_REL:results_in_commitment_to oligodendrocyte [cdef(GO:0045165, [OBO_REL:results_in_commitment_to=CL:0000128])] ! Already have xp for: GO:0021780 glial cell fate specification ! CURRENT : cell fate specification that OBO_REL:results_in_specification_of glial cell [cdef(GO:0001708, [OBO_REL:results_in_specification_of=CL:0000125])] ! Already have xp for: GO:0021781 glial cell fate commitment ! CURRENT : cell fate commitment that OBO_REL:results_in_commitment_to glial cell [cdef(GO:0045165, [OBO_REL:results_in_commitment_to=CL:0000125])] ! Already have xp for: GO:0021782 glial cell development ! CURRENT : developmental process that OBO_REL:results_in_developmental_progression_of glial cell [cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=CL:0000125])] ! No parse for: GO:0021785 branchiomotor neuron axon guidance ! Already have xp for: GO:0021786 branchiomotor neuron axon guidance in the neural tube ! CURRENT : branchiomotor neuron axon guidance that OBO_REL:unfolds_in neural tube [cdef(GO:0021785, [OBO_REL:unfolds_in=continuant:neural_tube])] ! Already have xp for: GO:0021789 branchiomotor neuron axon guidance in the branchial arch mesenchyme ! CURRENT : branchiomotor neuron axon guidance that OBO_REL:unfolds_in branchial arch mesenchyme [cdef(GO:0021785, [OBO_REL:unfolds_in=continuant:branchial_arch_mesenchyme])] ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0021794 using "thalamus development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000179]) [-2] ! parse: GO:0021794 using "thalamus development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000653]) [-2] ! parse: GO:0021794 using "thalamus development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0001215]) [-2] ! no existing xp def ! def: "The process by which the thalamus changes over time, from its initial formation to its mature state." ! PROPOSED: developmental process that results_in_complete_developmental_of thalamus [cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0001215])] [Term] id: GO:0021794 ! thalamus development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of ZFA:0001215 ! thalamus ! seconds spent parsing GO:0021794: 5.98 ! parse: GO:0021795 using "cerebral cortex cell migration" => cdef(GO:0016477, [OBO_REL:results_in_movement_of=CL:0000000, OBO_REL:unfolds_in=FBbt:00003625]) [-3] ! parse: GO:0021795 using "cerebral cortex cell migration" => cdef(GO:0016477, [OBO_REL:results_in_movement_of=CL:0000000, OBO_REL:unfolds_in=MA:0000185]) [-3] ! parse: GO:0021795 using "cerebral cortex cell migration" => cdef(GO:0016477, [OBO_REL:results_in_movement_of=CL:0000000, OBO_REL:unfolds_in=MA:0002754]) [-3] ! no existing xp def ! def: "The orderly movement of cells from one site to another in the cerebral cortex." ! PROPOSED: cell migration that OBO_REL:results_in_movement_of cell and OBO_REL:unfolds_in neocortex [cdef(GO:0016477, [OBO_REL:results_in_movement_of=CL:0000000, OBO_REL:unfolds_in=MA:0002754])] [Term] id: GO:0021795 ! cerebral cortex cell migration intersection_of: GO:0016477 ! cell migration intersection_of: OBO_REL:results_in_movement_of CL:0000000 ! cell intersection_of: OBO_REL:unfolds_in MA:0002754 ! neocortex synonym: "neocortex cell cell migration" EXACT [OBOL:automatic] synonym: "neocortex cell migration" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021795: 14.96 ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0021796 using "cerebral cortex pattern biosynthesis" => cdef(GO:0007389, [OBO_REL:results_in_developmental_progression_of=FBbt:00003625]) [-2] ! parse: GO:0021796 using "cerebral cortex pattern biosynthesis" => cdef(GO:0007389, [OBO_REL:results_in_developmental_progression_of=MA:0000185]) [-2] ! parse: GO:0021796 using "cerebral cortex pattern biosynthesis" => cdef(GO:0007389, [OBO_REL:results_in_developmental_progression_of=MA:0002754]) [-2] ! parse: GO:0021796 using "cerebral cortex pattern biosynthesis" => cdef(GO:0007389, [OBO_REL:results_in_patterning_for=FBbt:00003625]) [-2] ! parse: GO:0021796 using "cerebral cortex pattern biosynthesis" => cdef(GO:0007389, [OBO_REL:results_in_patterning_for=MA:0000185]) [-2] ! parse: GO:0021796 using "cerebral cortex pattern biosynthesis" => cdef(GO:0007389, [OBO_REL:results_in_patterning_for=MA:0002754]) [-2] ! parse: GO:0021796 using "cerebral cortex pattern biosynthesis" => cdef(GO:0007389, [OBO_REL:unfolds_in=FBbt:00003625]) [-2] ! parse: GO:0021796 using "cerebral cortex pattern biosynthesis" => cdef(GO:0007389, [OBO_REL:unfolds_in=MA:0000185]) [-2] ! parse: GO:0021796 using "cerebral cortex pattern biosynthesis" => cdef(GO:0007389, [OBO_REL:unfolds_in=MA:0002754]) [-2] ! parse: GO:0021796 using "cerebral cortex pattern formation" => cdef(GO:0007389, [OBO_REL:results_in_developmental_progression_of=FBbt:00003625]) [-2] ! parse: GO:0021796 using "cerebral cortex pattern formation" => cdef(GO:0007389, [OBO_REL:results_in_developmental_progression_of=MA:0000185]) [-2] ! parse: GO:0021796 using "cerebral cortex pattern formation" => cdef(GO:0007389, [OBO_REL:results_in_developmental_progression_of=MA:0002754]) [-2] ! parse: GO:0021796 using "cerebral cortex pattern formation" => cdef(GO:0007389, [OBO_REL:results_in_patterning_for=FBbt:00003625]) [-2] ! parse: GO:0021796 using "cerebral cortex pattern formation" => cdef(GO:0007389, [OBO_REL:results_in_patterning_for=MA:0000185]) [-2] ! parse: GO:0021796 using "cerebral cortex pattern formation" => cdef(GO:0007389, [OBO_REL:results_in_patterning_for=MA:0002754]) [-2] ! parse: GO:0021796 using "cerebral cortex pattern formation" => cdef(GO:0007389, [OBO_REL:unfolds_in=FBbt:00003625]) [-2] ! parse: GO:0021796 using "cerebral cortex pattern formation" => cdef(GO:0007389, [OBO_REL:unfolds_in=MA:0000185]) [-2] ! parse: GO:0021796 using "cerebral cortex pattern formation" => cdef(GO:0007389, [OBO_REL:unfolds_in=MA:0002754]) [-2] ! parse: GO:0021796 using "cerebral cortex pattern formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(pattern, anatomy), OBO_REL:unfolds_in=FBbt:00003625]) [-9] ! parse: GO:0021796 using "cerebral cortex pattern formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(pattern, anatomy), OBO_REL:unfolds_in=MA:0000185]) [-9] ! parse: GO:0021796 using "cerebral cortex pattern formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(pattern, anatomy), OBO_REL:unfolds_in=MA:0002754]) [-9] ! parse: GO:0021796 using "cerebral cortex regionalization" => cdef(GO:0003002, [OBO_REL:results_in_developmental_progression_of=FBbt:00003625]) [-2] ! parse: GO:0021796 using "cerebral cortex regionalization" => cdef(GO:0003002, [OBO_REL:results_in_developmental_progression_of=MA:0000185]) [-2] ! parse: GO:0021796 using "cerebral cortex regionalization" => cdef(GO:0003002, [OBO_REL:results_in_developmental_progression_of=MA:0002754]) [-2] ! parse: GO:0021796 using "cerebral cortex regionalization" => cdef(GO:0003002, [OBO_REL:results_in_patterning_for=FBbt:00003625]) [-2] ! parse: GO:0021796 using "cerebral cortex regionalization" => cdef(GO:0003002, [OBO_REL:results_in_patterning_for=MA:0000185]) [-2] ! parse: GO:0021796 using "cerebral cortex regionalization" => cdef(GO:0003002, [OBO_REL:results_in_patterning_for=MA:0002754]) [-2] ! parse: GO:0021796 using "cerebral cortex regionalization" => cdef(GO:0003002, [OBO_REL:unfolds_in=FBbt:00003625]) [-2] ! parse: GO:0021796 using "cerebral cortex regionalization" => cdef(GO:0003002, [OBO_REL:unfolds_in=MA:0000185]) [-2] ! parse: GO:0021796 using "cerebral cortex regionalization" => cdef(GO:0003002, [OBO_REL:unfolds_in=MA:0002754]) [-2] ! no existing xp def ! def: "The regionalization process that results in the creation of areas within the cerebral cortex that will direct the behavior of cell migration and differentiation as the cortex develops." ! PROPOSED: pattern specification process that OBO_REL:unfolds_in neocortex [cdef(GO:0007389, [OBO_REL:unfolds_in=MA:0002754])] [Term] id: GO:0021796 ! cerebral cortex regionalization intersection_of: GO:0007389 ! pattern specification process intersection_of: OBO_REL:unfolds_in MA:0002754 ! neocortex synonym: "neocortex pattern biosynthesis" EXACT [OBOL:automatic] synonym: "neocortex pattern formation" EXACT [OBOL:automatic] synonym: "neocortex pattern specification process" EXACT [OBOL:automatic] synonym: "pattern biosynthesis in neocortex" EXACT [OBOL:automatic] synonym: "pattern biosynthesis in the neocortex" EXACT [OBOL:automatic] synonym: "pattern biosynthesis through the neocortex" EXACT [OBOL:automatic] synonym: "pattern specification process in neocortex" EXACT [OBOL:automatic] synonym: "pattern specification process in the neocortex" EXACT [OBOL:automatic] synonym: "pattern specification process through the neocortex" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021796: 40.1 ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0021797 using "forebrain anterior-posterior pattern formation" => cdef(GO:0007389, [OBO_REL:results_in_developmental_progression_of=anon(anterior-posterior, anatomy), OBO_REL:unfolds_in=MA:0000170]) [-20] ! parse: GO:0021797 using "forebrain anterior-posterior pattern formation" => cdef(GO:0007389, [OBO_REL:results_in_developmental_progression_of=anon(anterior-posterior, anatomy), OBO_REL:unfolds_in=ZFA:0000109]) [-20] ! parse: GO:0021797 using "forebrain anterior-posterior pattern formation" => cdef(GO:0007389, [OBO_REL:results_in_developmental_progression_of=anon(anterior-posterior, anatomy), OBO_REL:unfolds_in=cell:forebrain]) [-20] ! parse: GO:0021797 using "forebrain anterior-posterior pattern formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(anterior-posterior pattern, anatomy), OBO_REL:unfolds_in=MA:0000170]) [-28] ! parse: GO:0021797 using "forebrain anterior-posterior pattern formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(anterior-posterior pattern, anatomy), OBO_REL:unfolds_in=ZFA:0000109]) [-28] ! parse: GO:0021797 using "forebrain anterior-posterior pattern formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(anterior-posterior pattern, anatomy), OBO_REL:unfolds_in=cell:forebrain]) [-28] ! no existing xp def ! def: "The creation of specific areas of progenitor domains along the anterior-posterior axis of the developing forebrain." ! PROPOSED: pattern specification process that OBO_REL:results_in_developmental_progression_of anon(anterior-posterior, anatomy) and OBO_REL:unfolds_in forebrain [cdef(GO:0007389, [OBO_REL:results_in_developmental_progression_of=anon(anterior-posterior, anatomy), OBO_REL:unfolds_in=cell:forebrain])] [Term] id: GO:0021797 ! forebrain anterior-posterior pattern formation intersection_of: GO:0007389 ! pattern specification process intersection_of: OBO_REL:results_in_developmental_progression_of anatomy:anterior_-_posterior intersection_of: OBO_REL:unfolds_in cell:forebrain ! forebrain synonym: "forebrain anterior-posterior pattern biosynthesis" EXACT [OBOL:automatic] synonym: "forebrain anterior-posterior pattern specification process" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021797: 12.65 ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0021798 using "forebrain dorsal-ventral pattern formation" => cdef(GO:0007389, [OBO_REL:results_in_developmental_progression_of=anon(dorsal-ventral, anatomy), OBO_REL:unfolds_in=MA:0000170]) [-16] ! parse: GO:0021798 using "forebrain dorsal-ventral pattern formation" => cdef(GO:0007389, [OBO_REL:results_in_developmental_progression_of=anon(dorsal-ventral, anatomy), OBO_REL:unfolds_in=ZFA:0000109]) [-16] ! parse: GO:0021798 using "forebrain dorsal-ventral pattern formation" => cdef(GO:0007389, [OBO_REL:results_in_developmental_progression_of=anon(dorsal-ventral, anatomy), OBO_REL:unfolds_in=cell:forebrain]) [-16] ! parse: GO:0021798 using "forebrain dorsal-ventral pattern formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(dorsal-ventral pattern, anatomy), OBO_REL:unfolds_in=MA:0000170]) [-24] ! parse: GO:0021798 using "forebrain dorsal-ventral pattern formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(dorsal-ventral pattern, anatomy), OBO_REL:unfolds_in=ZFA:0000109]) [-24] ! parse: GO:0021798 using "forebrain dorsal-ventral pattern formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(dorsal-ventral pattern, anatomy), OBO_REL:unfolds_in=cell:forebrain]) [-24] ! no existing xp def ! def: "The formation of specific regional progenitor domains along the dorsal-ventral axis in the developing forebrain." ! PROPOSED: pattern specification process that OBO_REL:results_in_developmental_progression_of anon(dorsal-ventral, anatomy) and OBO_REL:unfolds_in forebrain [cdef(GO:0007389, [OBO_REL:results_in_developmental_progression_of=anon(dorsal-ventral, anatomy), OBO_REL:unfolds_in=cell:forebrain])] [Term] id: GO:0021798 ! forebrain dorsal-ventral pattern formation intersection_of: GO:0007389 ! pattern specification process intersection_of: OBO_REL:results_in_developmental_progression_of anatomy:dorsal_-_ventral intersection_of: OBO_REL:unfolds_in cell:forebrain ! forebrain synonym: "forebrain dorsal-ventral pattern biosynthesis" EXACT [OBOL:automatic] synonym: "forebrain dorsal-ventral pattern specification process" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021798: 12.65 ! No parse for: GO:0021799 cerebral cortex radially oriented migration ! No parse for: GO:0021800 cerebral cortex tangential migration ! No parse for: GO:0021801 cerebral cortex radial glia guided migration ! No parse for: GO:0021802 somal translocation ! Already have xp for: GO:0021805 cell movement involved in somal translocation ! CURRENT : cell motility that OBO_REL:part_of somal translocation [cdef(GO:0006928, [OBO_REL:part_of=GO:0021802])] ! No parse for: GO:0021808 cytosolic calcium signaling involved in the initiation of cell movement in glial-mediated radial cell migration ! Already have xp for: GO:0021812 neuronal-glial interaction involved in cerebral cortex glial-mediated radial cell migration ! CURRENT : radial_cell_migration that OBO_REL:mediated_by neuronal-glial interaction involved in cerebral cortex glial- [cdef(radial_cell_migration, [OBO_REL:mediated_by=cell:neuronal_-_glial_interaction_involved_in_cerebral_cortex_glial_-])] ! No parse for: GO:0021813 cell-cell adhesion involved in neuronal-glial interactions involved in cerebral cortex glial-mediated radial cell migration ! No parse for: GO:0021814 cell locomotion involved in cerebral cortex glial-mediated radial migration ! No parse for: GO:0021816 extension of a leading process involved in cell locomotion in cerebral cortex glial-mediated radial migration ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0021819 using "layer formation in the cerebral cortex" => cdef(cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(layer, anatomy)]), [OBO_REL:unfolds_in=FBbt:00003625]) [-7] ! parse: GO:0021819 using "layer formation in the cerebral cortex" => cdef(cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(layer, anatomy)]), [OBO_REL:unfolds_in=MA:0000185]) [-7] ! parse: GO:0021819 using "layer formation in the cerebral cortex" => cdef(cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(layer, anatomy)]), [OBO_REL:unfolds_in=MA:0002754]) [-7] ! no existing xp def ! def: "The detachment of cells from radial glial fibers at the appropriate time when they cease to migrate and form distinct layer in the cerebral cortex." ! PROPOSED: cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(layer, anatomy)]) that OBO_REL:unfolds_in neocortex [cdef(cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(layer, anatomy)]), [OBO_REL:unfolds_in=MA:0002754])] [Term] id: GO:0021819 ! layer formation in the cerebral cortex intersection_of: layer_anatomical_structure_formation intersection_of: OBO_REL:unfolds_in MA:0002754 ! neocortex ! seconds spent parsing GO:0021819: 14.8 ! No parse for: GO:0021820 organization of extracellular matrix in the marginal zone involved in cerebral cortex glial-mediated radial cell migration ! No parse for: GO:0021823 cerebral cortex tangential migration using cell-cell interactions ! No parse for: GO:0021824 cerebral cortex tangential migration using cell-axon interactions ! No parse for: GO:0021828 gonadotrophin-releasing hormone neuronal migration to the hypothalamus ! No parse for: GO:0021829 oligodendrocyte cell migration from the subpallium to the cortex ! No parse for: GO:0021830 interneuron migration from the subpallium to the cortex ! parse: GO:0021831 using "embryonic olfactory bulb interneuron precursor migration" => cdef(cdef(GO:0016477, [OBO_REL:results_in_movement_of=cdef(CL:0000000, [OBO_REL:develops_into=CL:0000099]), OBO_REL:unfolds_in=MA:0000194]), [OBO_REL:part_of=GO:0009790]) [-5] ! parse: GO:0021831 using "embryonic olfactory bulb interneuron precursor migration" => cdef(cdef(GO:0016477, [OBO_REL:results_in_movement_of=cdef(CL:0000000, [OBO_REL:develops_into=CL:0000099]), OBO_REL:unfolds_in=ZFA:0000402]), [OBO_REL:part_of=GO:0009790]) [-5] ! no existing xp def ! def: "The directed movement of individual interneuron precursors during the embryonic development of the olfactory bulb." ! PROPOSED: cdef(GO:0016477, [OBO_REL:results_in_movement_of=cdef(CL:0000000, [OBO_REL:develops_into=CL:0000099]), OBO_REL:unfolds_in=ZFA:0000402]) that OBO_REL:part_of embryonic development [cdef(cdef(GO:0016477, [OBO_REL:results_in_movement_of=cdef(CL:0000000, [OBO_REL:develops_into=CL:0000099]), OBO_REL:unfolds_in=ZFA:0000402]), [OBO_REL:part_of=GO:0009790])] [Term] id: GO:0021831 ! embryonic olfactory bulb interneuron precursor migration intersection_of: olfactory_bulb_interneuron_precursor_migration intersection_of: OBO_REL:part_of GO:0009790 ! embryonic development synonym: "embryogenesis, olfactory bulb interneuron precursor migration" EXACT [OBOL:automatic] synonym: "embryonal development, olfactory bulb interneuron precursor migration" EXACT [OBOL:automatic] synonym: "embryonic development, olfactory bulb interneuron precursor migration" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021831: 26.29 ! Already have xp for: GO:0021832 cell-cell adhesion involved in cerebral cortex tangential migration using cell-cell interactions ! CURRENT : cell-cell adhesion that OBO_REL:part_of cerebral cortex tangential migration using cell-cell interactions [cdef(GO:0016337, [OBO_REL:part_of=GO:0021823])] ! No parse for: GO:0021833 cell-substrate adhesion involved in tangential migration using cell-cell interactions ! No parse for: GO:0021839 interneuron-substratum interaction involved in interneuron migration from the subpallium to the cortex ! No parse for: GO:0021844 interneuron sorting involved in substrate-independent cerebral cortex tangential migration ! Already have xp for: GO:0021846 cell proliferation in the forebrain ! CURRENT : cell proliferation that OBO_REL:unfolds_in forebrain [cdef(GO:0008283, [OBO_REL:unfolds_in=continuant:forebrain])] ! Already have xp for: GO:0021847 neuroblast division in the ventricular zone ! CURRENT : neuroblast division that OBO_REL:unfolds_in ventricular zone and OBO_REL:unfolds_in ventricular zone [cdef(GO:0045034, [OBO_REL:unfolds_in=cell:ventricular_zone, OBO_REL:unfolds_in=continuant:ventricular_zone])] ! Already have xp for: GO:0021848 neuroblast division in the subpallium ! CURRENT : neuroblast division that OBO_REL:unfolds_in subpallium and OBO_REL:unfolds_in subpallium [cdef(GO:0045034, [OBO_REL:unfolds_in=cell:subpallium, OBO_REL:unfolds_in=continuant:subpallium])] ! Already have xp for: GO:0021849 neuroblast division in the subventricular zone ! CURRENT : neuroblast division that OBO_REL:unfolds_in subventricular zone and OBO_REL:unfolds_in subventricular zone [cdef(GO:0045034, [OBO_REL:unfolds_in=cell:subventricular_zone, OBO_REL:unfolds_in=continuant:subventricular_zone])] ! Already have xp for: GO:0021850 glioblast cell division in the subpallium ! CURRENT : glioblast cell division that OBO_REL:unfolds_in subpallium and OBO_REL:unfolds_in subpallium [cdef(GO:0048860, [OBO_REL:unfolds_in=cell:subpallium, OBO_REL:unfolds_in=continuant:subpallium])] ! Already have xp for: GO:0021851 neuroblast division in the dorsal lateral ganglionic eminence ! CURRENT : neuroblast division that OBO_REL:unfolds_in dorsal lateral ganglionic eminence and OBO_REL:unfolds_in dorsal lateral ganglionic eminence [cdef(GO:0045034, [OBO_REL:unfolds_in=cell:dorsal_lateral_ganglionic_eminence, OBO_REL:unfolds_in=continuant:dorsal_lateral_ganglionic_eminence])] ! No parse for: GO:0021853 cerebral cortex GABAergic interneuron migration ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0021854 using "hypothalamus development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000173]) [-2] ! parse: GO:0021854 using "hypothalamus development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000032]) [-2] ! no existing xp def ! def: "The progression of the hypothalamus region of the forebrain, from its initial formation to its mature state." ! PROPOSED: developmental process that results_in_complete_developmental_of hypothalamus [cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000032])] [Term] id: GO:0021854 ! hypothalamus development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of ZFA:0000032 ! hypothalamus ! seconds spent parsing GO:0021854: 5.34 ! parse: GO:0021855 using "hypothalamus cell migration" => cdef(GO:0016477, [OBO_REL:results_in_movement_of=CL:0000000, OBO_REL:unfolds_in=MA:0000173]) [-3] ! parse: GO:0021855 using "hypothalamus cell migration" => cdef(GO:0016477, [OBO_REL:results_in_movement_of=CL:0000000, OBO_REL:unfolds_in=ZFA:0000032]) [-3] ! no existing xp def ! def: "The directed movement of cells into the hypothalamus region of the forebrain." ! PROPOSED: cell migration that OBO_REL:results_in_movement_of cell and OBO_REL:unfolds_in hypothalamus [cdef(GO:0016477, [OBO_REL:results_in_movement_of=CL:0000000, OBO_REL:unfolds_in=ZFA:0000032])] [Term] id: GO:0021855 ! hypothalamus cell migration intersection_of: GO:0016477 ! cell migration intersection_of: OBO_REL:results_in_movement_of CL:0000000 ! cell intersection_of: OBO_REL:unfolds_in ZFA:0000032 ! hypothalamus ! seconds spent parsing GO:0021855: 11.33 ! Already have xp for: GO:0021858 GABAergic neuron differentiation in the basal ganglia ! CURRENT : GABAergic_neuron_cell_differentiation that OBO_REL:unfolds_in basal ganglia [cdef(GABAergic_neuron_cell_differentiation, [OBO_REL:unfolds_in=cell:basal_ganglia])] ! Already have xp for: GO:0021861 radial glial cell differentiation in the forebrain ! CURRENT : radial glial cell differentiation that OBO_REL:unfolds_in forebrain and OBO_REL:unfolds_in forebrain [cdef(GO:0060019, [OBO_REL:unfolds_in=cell:forebrain, OBO_REL:unfolds_in=continuant:forebrain])] ! Already have xp for: GO:0021863 neuroblast cell differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of neuroblast [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000031])] ! Already have xp for: GO:0021864 radial glial cell division in the forebrain ! CURRENT : radial_glial_cell_cell_division that OBO_REL:unfolds_in forebrain [cdef(radial_glial_cell_cell_division, [OBO_REL:unfolds_in=cell:forebrain])] ! No parse for: GO:0021867 neuron-producing asymmetric radial glial cell division in the forebrain ! No parse for: GO:0021868 ventricular zone cell-producing asymmetric radial glial cell division in the forebrain ! No parse for: GO:0021869 forebrain ventricular zone progenitor cell division ! Already have xp for: GO:0021870 Cajal-Retzius cell differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of Cajal-Retzius cell [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000695])] ! parse: GO:0021871 using "forebrain regionalization" => cdef(GO:0003002, [OBO_REL:results_in_developmental_progression_of=MA:0000170]) [-2] ! parse: GO:0021871 using "forebrain regionalization" => cdef(GO:0003002, [OBO_REL:results_in_developmental_progression_of=ZFA:0000109]) [-2] ! parse: GO:0021871 using "forebrain regionalization" => cdef(GO:0003002, [OBO_REL:results_in_developmental_progression_of=cell:forebrain]) [-2] ! parse: GO:0021871 using "forebrain regionalization" => cdef(GO:0003002, [OBO_REL:results_in_patterning_for=MA:0000170]) [-2] ! parse: GO:0021871 using "forebrain regionalization" => cdef(GO:0003002, [OBO_REL:results_in_patterning_for=ZFA:0000109]) [-2] ! parse: GO:0021871 using "forebrain regionalization" => cdef(GO:0003002, [OBO_REL:results_in_patterning_for=cell:forebrain]) [-2] ! parse: GO:0021871 using "forebrain regionalization" => cdef(GO:0003002, [OBO_REL:unfolds_in=MA:0000170]) [-2] ! parse: GO:0021871 using "forebrain regionalization" => cdef(GO:0003002, [OBO_REL:unfolds_in=ZFA:0000109]) [-2] ! parse: GO:0021871 using "forebrain regionalization" => cdef(GO:0003002, [OBO_REL:unfolds_in=cell:forebrain]) [-2] ! no existing xp def ! def: "The regionalization process resulting in the creation of areas within the forebrain that will direct the behavior of cell migration in differentiation as the forebrain develops." ! PROPOSED: regionalization that OBO_REL:unfolds_in forebrain [cdef(GO:0003002, [OBO_REL:unfolds_in=cell:forebrain])] [Term] id: GO:0021871 ! forebrain regionalization intersection_of: GO:0003002 ! regionalization intersection_of: OBO_REL:unfolds_in cell:forebrain ! forebrain ! seconds spent parsing GO:0021871: 8.11 ! parse: GO:0021873 using "forebrain neuroblast division" => cdef(GO:0045034, [OBO_REL:results_in_division_of=cell:forebrain]) [-2] ! parse: GO:0021873 using "forebrain neuroblast division" => cdef(GO:0051301, [OBO_REL:results_in_division_of=CL:0000031, OBO_REL:unfolds_in=MA:0000170]) [-3] ! parse: GO:0021873 using "forebrain neuroblast division" => cdef(GO:0051301, [OBO_REL:results_in_division_of=CL:0000031, OBO_REL:unfolds_in=ZFA:0000109]) [-3] ! parse: GO:0021873 using "forebrain neuroblast division" => cdef(GO:0051301, [OBO_REL:results_in_division_of=CL:0000031, OBO_REL:unfolds_in=cell:forebrain]) [-3] ! parse: GO:0021873 using "forebrain neuroblast division" => cdef(ZFA:0000098, [OBO_REL:results_in_division_of=CL:0000031, OBO_REL:unfolds_in=MA:0000170]) [-3] ! parse: GO:0021873 using "forebrain neuroblast division" => cdef(ZFA:0000098, [OBO_REL:results_in_division_of=CL:0000031, OBO_REL:unfolds_in=ZFA:0000109]) [-3] ! parse: GO:0021873 using "forebrain neuroblast division" => cdef(ZFA:0000098, [OBO_REL:results_in_division_of=CL:0000031, OBO_REL:unfolds_in=cell:forebrain]) [-3] ! no existing xp def ! def: "The division of a neuroblast, the neural precursor in the forebrain, giving rise to at least another neuroblast. As in, but not restricted to, the vertebrates (Vertebrata, ncbi_taxonomy_id:7742)." ! PROPOSED: neuroblast division that OBO_REL:results_in_division_of forebrain [cdef(GO:0045034, [OBO_REL:results_in_division_of=cell:forebrain])] [Term] id: GO:0021873 ! forebrain neuroblast division intersection_of: GO:0045034 ! neuroblast division intersection_of: OBO_REL:results_in_division_of cell:forebrain ! forebrain synonym: "forebrain neuroblast cell division" EXACT [OBOL:automatic] def: "The creation of two or more cell:forebrain s by division of one cell:forebrain" [OBOL:automatic] ! seconds spent parsing GO:0021873: 26.46 ! Already have xp for: GO:0021875 fibroblast growth factor receptor signaling pathway in forebrain neuroblast division ! CURRENT : fibroblast growth factor receptor signaling pathway that OBO_REL:unfolds_in forebrain neuroblast division [cdef(GO:0008543, [OBO_REL:unfolds_in=cell:forebrain_neuroblast_division])] ! parse: GO:0021877 using "forebrain neuron fate commitment" => cdef(GO:0045165, [OBO_REL:results_in_commitment_to=CL:0000540, OBO_REL:unfolds_in=MA:0000170]) [-3] ! parse: GO:0021877 using "forebrain neuron fate commitment" => cdef(GO:0045165, [OBO_REL:results_in_commitment_to=CL:0000540, OBO_REL:unfolds_in=ZFA:0000109]) [-3] ! parse: GO:0021877 using "forebrain neuron fate commitment" => cdef(GO:0045165, [OBO_REL:results_in_commitment_to=CL:0000540, OBO_REL:unfolds_in=cell:forebrain]) [-3] ! parse: GO:0021877 using "forebrain neuron fate commitment" => cdef(GO:0048663, [OBO_REL:results_in_commitment_to=cell:forebrain]) [-2] ! no existing xp def ! def: "The process whereby the developmental fate of a cell becomes restricted such that it will develop into a neuron that resides in the forebrain." ! PROPOSED: neuron fate commitment that OBO_REL:results_in_commitment_to forebrain [cdef(GO:0048663, [OBO_REL:results_in_commitment_to=cell:forebrain])] [Term] id: GO:0021877 ! forebrain neuron fate commitment intersection_of: GO:0048663 ! neuron fate commitment intersection_of: OBO_REL:results_in_commitment_to cell:forebrain ! forebrain synonym: "forebrain nerve cell cell fate commitment" EXACT [OBOL:automatic] synonym: "forebrain nerve cell commitment" EXACT [OBOL:automatic] synonym: "forebrain nerve cell fate commitment" EXACT [OBOL:automatic] synonym: "forebrain nerve cell lineage commitment" EXACT [OBOL:automatic] synonym: "forebrain neuron cell fate commitment" EXACT [OBOL:automatic] synonym: "forebrain neuron commitment" EXACT [OBOL:automatic] synonym: "forebrain neuron lineage commitment" EXACT [OBOL:automatic] synonym: "forebrain neuron lineage restriction" EXACT [OBOL:automatic] synonym: "forebrain neuronal lineage restriction" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021877: 22.57 ! parse: GO:0021878 using "forebrain astrocyte fate commitment" => cdef(GO:0045165, [OBO_REL:results_in_commitment_to=CL:0000127, OBO_REL:unfolds_in=MA:0000170]) [-3] ! parse: GO:0021878 using "forebrain astrocyte fate commitment" => cdef(GO:0045165, [OBO_REL:results_in_commitment_to=CL:0000127, OBO_REL:unfolds_in=ZFA:0000109]) [-3] ! parse: GO:0021878 using "forebrain astrocyte fate commitment" => cdef(GO:0045165, [OBO_REL:results_in_commitment_to=CL:0000127, OBO_REL:unfolds_in=cell:forebrain]) [-3] ! parse: GO:0021878 using "forebrain astrocyte fate commitment" => cdef(GO:0060018, [OBO_REL:results_in_commitment_to=cell:forebrain]) [-2] ! no existing xp def ! def: "The process whereby the developmental fate of a cell becomes restricted such that it will develop into an astrocyte that resides in the forebrain." ! PROPOSED: astrocyte fate commitment that OBO_REL:results_in_commitment_to forebrain [cdef(GO:0060018, [OBO_REL:results_in_commitment_to=cell:forebrain])] [Term] id: GO:0021878 ! forebrain astrocyte fate commitment intersection_of: GO:0060018 ! astrocyte fate commitment intersection_of: OBO_REL:results_in_commitment_to cell:forebrain ! forebrain synonym: "forebrain astrocyte cell fate commitment" EXACT [OBOL:automatic] synonym: "forebrain astrocyte commitment" EXACT [OBOL:automatic] synonym: "forebrain astrocyte lineage commitment" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021878: 19.58 ! parse: GO:0021879 using "forebrain neuron differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000540, OBO_REL:unfolds_in=MA:0000170]) [-3] ! parse: GO:0021879 using "forebrain neuron differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000540, OBO_REL:unfolds_in=ZFA:0000109]) [-3] ! parse: GO:0021879 using "forebrain neuron differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000540, OBO_REL:unfolds_in=cell:forebrain]) [-3] ! parse: GO:0021879 using "forebrain neuron differentiation" => cdef(GO:0030182, [OBO_REL:results_in_acquisition_of_features_of=cell:forebrain]) [-2] ! parse: GO:0021879 using "forebrain neuron differentiation" => cdef(GO:0030182, [OBO_REL:results_in_developmental_progression_of=MA:0000170]) [-2] ! parse: GO:0021879 using "forebrain neuron differentiation" => cdef(GO:0030182, [OBO_REL:results_in_developmental_progression_of=ZFA:0000109]) [-2] ! parse: GO:0021879 using "forebrain neuron differentiation" => cdef(GO:0030182, [OBO_REL:results_in_developmental_progression_of=cell:forebrain]) [-2] ! no existing xp def ! def: "The process whereby a relatively unspecialized cell acquires specialized features of a neuron that will reside in the forebrain." ! PROPOSED: neuron differentiation that OBO_REL:results_in_developmental_progression_of forebrain [cdef(GO:0030182, [OBO_REL:results_in_developmental_progression_of=cell:forebrain])] [Term] id: GO:0021879 ! forebrain neuron differentiation intersection_of: GO:0030182 ! neuron differentiation intersection_of: OBO_REL:results_in_developmental_progression_of cell:forebrain ! forebrain synonym: "forebrain nerve cell cell differentiation" EXACT [OBOL:automatic] synonym: "forebrain nerve cell differentiation" EXACT [OBOL:automatic] synonym: "forebrain neuron cell differentiation" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021879: 22.64 ! No parse for: GO:0021883 cell cycle arrest of committed forebrain neuronal progenitor cell ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0021884 using "forebrain neuron development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=CL:0000540, OBO_REL:unfolds_in=MA:0000170]) [-3] ! parse: GO:0021884 using "forebrain neuron development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=CL:0000540, OBO_REL:unfolds_in=ZFA:0000109]) [-3] ! parse: GO:0021884 using "forebrain neuron development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=CL:0000540, OBO_REL:unfolds_in=cell:forebrain]) [-3] ! parse: GO:0021884 using "forebrain neuron development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=FBbt:00005106, OBO_REL:unfolds_in=MA:0000170]) [-3] ! parse: GO:0021884 using "forebrain neuron development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=FBbt:00005106, OBO_REL:unfolds_in=ZFA:0000109]) [-3] ! parse: GO:0021884 using "forebrain neuron development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=FBbt:00005106, OBO_REL:unfolds_in=cell:forebrain]) [-3] ! parse: GO:0021884 using "forebrain neuron development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=ZFA:0009248, OBO_REL:unfolds_in=MA:0000170]) [-3] ! parse: GO:0021884 using "forebrain neuron development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=ZFA:0009248, OBO_REL:unfolds_in=ZFA:0000109]) [-3] ! parse: GO:0021884 using "forebrain neuron development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=ZFA:0009248, OBO_REL:unfolds_in=cell:forebrain]) [-3] ! parse: GO:0021884 using "forebrain neuron development" => cdef(GO:0032502, [results_in_complete_developmental_of=CL:0000540, OBO_REL:unfolds_in=MA:0000170]) [-3] ! parse: GO:0021884 using "forebrain neuron development" => cdef(GO:0032502, [results_in_complete_developmental_of=CL:0000540, OBO_REL:unfolds_in=ZFA:0000109]) [-3] ! parse: GO:0021884 using "forebrain neuron development" => cdef(GO:0032502, [results_in_complete_developmental_of=CL:0000540, OBO_REL:unfolds_in=cell:forebrain]) [-3] ! parse: GO:0021884 using "forebrain neuron development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00005106, OBO_REL:unfolds_in=MA:0000170]) [-3] ! parse: GO:0021884 using "forebrain neuron development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00005106, OBO_REL:unfolds_in=ZFA:0000109]) [-3] ! parse: GO:0021884 using "forebrain neuron development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00005106, OBO_REL:unfolds_in=cell:forebrain]) [-3] ! parse: GO:0021884 using "forebrain neuron development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0009248, OBO_REL:unfolds_in=MA:0000170]) [-3] ! parse: GO:0021884 using "forebrain neuron development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0009248, OBO_REL:unfolds_in=ZFA:0000109]) [-3] ! parse: GO:0021884 using "forebrain neuron development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0009248, OBO_REL:unfolds_in=cell:forebrain]) [-3] ! parse: GO:0021884 using "forebrain neuron development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(FBbt:00005106, [OBO_REL:part_of=MA:0000170])]) [-3] ! parse: GO:0021884 using "forebrain neuron development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(FBbt:00005106, [OBO_REL:part_of=ZFA:0000109])]) [-3] ! parse: GO:0021884 using "forebrain neuron development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(ZFA:0009248, [OBO_REL:part_of=MA:0000170])]) [-3] ! parse: GO:0021884 using "forebrain neuron development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(ZFA:0009248, [OBO_REL:part_of=ZFA:0000109])]) [-3] ! no existing xp def ! def: "The process whose specific outcome is the progression of a neuron that resides in the forebrain, from its initial commitment to its fate, to the fully functional differentiated cell." ! PROPOSED: developmental process that results_in_complete_developmental_of cdef(ZFA:0009248, [OBO_REL:part_of=ZFA:0000109]) [cdef(GO:0032502, [results_in_complete_developmental_of=cdef(ZFA:0009248, [OBO_REL:part_of=ZFA:0000109])])] [Term] id: GO:0021884 ! forebrain neuron development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of forebrain_neuron synonym: "prosencephalon neuron development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021884: 23.39 ! parse: GO:0021885 using "forebrain cell migration" => cdef(GO:0016477, [OBO_REL:results_in_movement_of=CL:0000000, OBO_REL:unfolds_in=MA:0000170]) [-3] ! parse: GO:0021885 using "forebrain cell migration" => cdef(GO:0016477, [OBO_REL:results_in_movement_of=CL:0000000, OBO_REL:unfolds_in=ZFA:0000109]) [-3] ! parse: GO:0021885 using "forebrain cell migration" => cdef(GO:0016477, [OBO_REL:results_in_movement_of=CL:0000000, OBO_REL:unfolds_in=cell:forebrain]) [-3] ! parse: GO:0021885 using "forebrain cell migration" => cdef(GO:0016477, [OBO_REL:results_in_movement_of=cell:forebrain]) [-2] ! no existing xp def ! def: "The orderly movement of cells from one site to another at least one of which is located in the forebrain." ! PROPOSED: cell migration that OBO_REL:results_in_movement_of forebrain [cdef(GO:0016477, [OBO_REL:results_in_movement_of=cell:forebrain])] [Term] id: GO:0021885 ! forebrain cell migration intersection_of: GO:0016477 ! cell migration intersection_of: OBO_REL:results_in_movement_of cell:forebrain ! forebrain synonym: "forebrain migration" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021885: 17.25 ! parse: GO:0021886 using "hypothalamus gonadotrophin-releasing hormone neuron differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(gonadotrophin-releasing hormone neuron, cell), OBO_REL:unfolds_in=MA:0000173]) [-40] ! parse: GO:0021886 using "hypothalamus gonadotrophin-releasing hormone neuron differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(gonadotrophin-releasing hormone neuron, cell), OBO_REL:unfolds_in=ZFA:0000032]) [-40] ! parse: GO:0021886 using "hypothalamus gonadotrophin-releasing hormone neuron differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(hypothalamus gonadotrophin-releasing hormone neuron, cell)]) [-52] ! parse: GO:0021886 using "hypothalamus gonadotrophin-releasing hormone neuron differentiation" => cdef(GO:0030182, [OBO_REL:results_in_acquisition_of_features_of=anon(gonadotrophin-releasing hormone, cell), OBO_REL:unfolds_in=MA:0000173]) [-33] ! parse: GO:0021886 using "hypothalamus gonadotrophin-releasing hormone neuron differentiation" => cdef(GO:0030182, [OBO_REL:results_in_acquisition_of_features_of=anon(gonadotrophin-releasing hormone, cell), OBO_REL:unfolds_in=ZFA:0000032]) [-33] ! parse: GO:0021886 using "hypothalamus gonadotrophin-releasing hormone neuron differentiation" => cdef(GO:0030182, [OBO_REL:results_in_acquisition_of_features_of=anon(hypothalamus gonadotrophin-releasing hormone, cell)]) [-45] ! parse: GO:0021886 using "hypothalamus gonadotrophin-releasing hormone neuron differentiation" => cdef(GO:0030182, [OBO_REL:results_in_developmental_progression_of=anon(gonadotrophin-releasing hormone, anatomy), OBO_REL:unfolds_in=MA:0000173]) [-33] ! parse: GO:0021886 using "hypothalamus gonadotrophin-releasing hormone neuron differentiation" => cdef(GO:0030182, [OBO_REL:results_in_developmental_progression_of=anon(gonadotrophin-releasing hormone, anatomy), OBO_REL:unfolds_in=ZFA:0000032]) [-33] ! no existing xp def ! def: "The process whereby a relatively unspecialized cell acquires specialized features of a neuron located in the hypothalamus. These neurons release gonadotrophin-releasing hormone as a neural transmitter." ! PROPOSED: neuron differentiation that OBO_REL:results_in_developmental_progression_of anon(gonadotrophin-releasing hormone, anatomy) and OBO_REL:unfolds_in hypothalamus [cdef(GO:0030182, [OBO_REL:results_in_developmental_progression_of=anon(gonadotrophin-releasing hormone, anatomy), OBO_REL:unfolds_in=ZFA:0000032])] [Term] id: GO:0021886 ! hypothalamus gonadotrophin-releasing hormone neuron differentiation intersection_of: GO:0030182 ! neuron differentiation intersection_of: OBO_REL:results_in_developmental_progression_of anatomy:gonadotrophin_-_releasing_hormone intersection_of: OBO_REL:unfolds_in ZFA:0000032 ! hypothalamus ! seconds spent parsing GO:0021886: 10.13 ! No parse for: GO:0021887 hypothalamus gonadotrophin-releasing hormone neuron fate commitment ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0021888 using "hypothalamus gonadotrophin-releasing hormone neuron development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(gonadotrophin-releasing hormone neuron, anatomy), OBO_REL:unfolds_in=MA:0000173]) [-40] ! parse: GO:0021888 using "hypothalamus gonadotrophin-releasing hormone neuron development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(gonadotrophin-releasing hormone neuron, anatomy), OBO_REL:unfolds_in=ZFA:0000032]) [-40] ! no existing xp def ! def: "The process whose specific outcome is the progression of a hypothalamus gonadotrophin-releasing hormone neuron over time, from initial commitment of its fate, to the fully functional differentiated cell." ! PROPOSED: developmental process that results_in_complete_developmental_of anon(gonadotrophin-releasing hormone neuron, anatomy) and OBO_REL:unfolds_in hypothalamus [cdef(GO:0032502, [results_in_complete_developmental_of=anon(gonadotrophin-releasing hormone neuron, anatomy), OBO_REL:unfolds_in=ZFA:0000032])] [Term] id: GO:0021888 ! hypothalamus gonadotrophin-releasing hormone neuron development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of anatomy:gonadotrophin_-_releasing_hormone_neuron intersection_of: OBO_REL:unfolds_in ZFA:0000032 ! hypothalamus ! seconds spent parsing GO:0021888: 9.98 ! parse: GO:0021889 using "olfactory bulb interneuron differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000099, OBO_REL:unfolds_in=MA:0000194]) [-3] ! parse: GO:0021889 using "olfactory bulb interneuron differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000099, OBO_REL:unfolds_in=ZFA:0000402]) [-3] ! parse: GO:0021889 using "olfactory bulb interneuron differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(olfactory bulb interneuron, cell)]) [-27] ! no existing xp def ! def: "The process whereby a neuroblast acquires specialized features of an interneuron residing in the olfactory bulb." ! PROPOSED: cell differentiation that OBO_REL:results_in_acquisition_of_features_of interneuron and OBO_REL:unfolds_in olfactory bulb [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000099, OBO_REL:unfolds_in=ZFA:0000402])] [Term] id: GO:0021889 ! olfactory bulb interneuron differentiation intersection_of: GO:0030154 ! cell differentiation intersection_of: OBO_REL:results_in_acquisition_of_features_of CL:0000099 ! interneuron intersection_of: OBO_REL:unfolds_in ZFA:0000402 ! olfactory bulb ! seconds spent parsing GO:0021889: 15.25 ! parse: GO:0021890 using "olfactory bulb interneuron fate commitment" => cdef(GO:0045165, [OBO_REL:results_in_commitment_to=CL:0000099, OBO_REL:unfolds_in=MA:0000194]) [-3] ! parse: GO:0021890 using "olfactory bulb interneuron fate commitment" => cdef(GO:0045165, [OBO_REL:results_in_commitment_to=CL:0000099, OBO_REL:unfolds_in=ZFA:0000402]) [-3] ! no existing xp def ! def: "The process whereby the developmental fate of a neuroblast becomes restricted such that it will develop into an interneuron residing in the olfactory bulb." ! PROPOSED: cell fate commitment that OBO_REL:results_in_commitment_to interneuron and OBO_REL:unfolds_in olfactory bulb [cdef(GO:0045165, [OBO_REL:results_in_commitment_to=CL:0000099, OBO_REL:unfolds_in=ZFA:0000402])] [Term] id: GO:0021890 ! olfactory bulb interneuron fate commitment intersection_of: GO:0045165 ! cell fate commitment intersection_of: OBO_REL:results_in_commitment_to CL:0000099 ! interneuron intersection_of: OBO_REL:unfolds_in ZFA:0000402 ! olfactory bulb ! seconds spent parsing GO:0021890: 15.27 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0021891 using "olfactory bulb interneuron development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=CL:0000099, OBO_REL:unfolds_in=MA:0000194]) [-3] ! parse: GO:0021891 using "olfactory bulb interneuron development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=CL:0000099, OBO_REL:unfolds_in=ZFA:0000402]) [-3] ! parse: GO:0021891 using "olfactory bulb interneuron development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=FBbt:00005125, OBO_REL:unfolds_in=MA:0000194]) [-3] ! parse: GO:0021891 using "olfactory bulb interneuron development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=FBbt:00005125, OBO_REL:unfolds_in=ZFA:0000402]) [-3] ! parse: GO:0021891 using "olfactory bulb interneuron development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=ZFA:0009051, OBO_REL:unfolds_in=MA:0000194]) [-3] ! parse: GO:0021891 using "olfactory bulb interneuron development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=ZFA:0009051, OBO_REL:unfolds_in=ZFA:0000402]) [-3] ! parse: GO:0021891 using "olfactory bulb interneuron development" => cdef(GO:0032502, [results_in_complete_developmental_of=CL:0000099, OBO_REL:unfolds_in=MA:0000194]) [-3] ! parse: GO:0021891 using "olfactory bulb interneuron development" => cdef(GO:0032502, [results_in_complete_developmental_of=CL:0000099, OBO_REL:unfolds_in=ZFA:0000402]) [-3] ! parse: GO:0021891 using "olfactory bulb interneuron development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00005125, OBO_REL:unfolds_in=MA:0000194]) [-3] ! parse: GO:0021891 using "olfactory bulb interneuron development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00005125, OBO_REL:unfolds_in=ZFA:0000402]) [-3] ! parse: GO:0021891 using "olfactory bulb interneuron development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0009051, OBO_REL:unfolds_in=MA:0000194]) [-3] ! parse: GO:0021891 using "olfactory bulb interneuron development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0009051, OBO_REL:unfolds_in=ZFA:0000402]) [-3] ! parse: GO:0021891 using "olfactory bulb interneuron development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(FBbt:00005125, [OBO_REL:part_of=MA:0000194])]) [-3] ! parse: GO:0021891 using "olfactory bulb interneuron development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(FBbt:00005125, [OBO_REL:part_of=ZFA:0000402])]) [-3] ! parse: GO:0021891 using "olfactory bulb interneuron development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(ZFA:0009051, [OBO_REL:part_of=MA:0000194])]) [-3] ! parse: GO:0021891 using "olfactory bulb interneuron development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(ZFA:0009051, [OBO_REL:part_of=ZFA:0000402])]) [-3] ! no existing xp def ! def: "The process whose specific outcome is the progression of an interneuron residing in the olfactory bulb, from its initial commitment, to the fully functional differentiated cell." ! PROPOSED: developmental process that results_in_complete_developmental_of cdef(ZFA:0009051, [OBO_REL:part_of=ZFA:0000402]) [cdef(GO:0032502, [results_in_complete_developmental_of=cdef(ZFA:0009051, [OBO_REL:part_of=ZFA:0000402])])] [Term] id: GO:0021891 ! olfactory bulb interneuron development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of olfactory_bulb_interneuron synonym: "interneuron of olfactory bulb development" EXACT [OBOL:automatic] synonym: "interneuron of the olfactory bulb development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021891: 15.87 ! parse: GO:0021892 using "cerebral cortex GABAergic interneuron differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(GABAergic interneuron, cell), OBO_REL:unfolds_in=FBbt:00003625]) [-23] ! parse: GO:0021892 using "cerebral cortex GABAergic interneuron differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(GABAergic interneuron, cell), OBO_REL:unfolds_in=MA:0000185]) [-23] ! parse: GO:0021892 using "cerebral cortex GABAergic interneuron differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(GABAergic interneuron, cell), OBO_REL:unfolds_in=MA:0002754]) [-23] ! parse: GO:0021892 using "cerebral cortex GABAergic interneuron differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(cerebral cortex GABAergic interneuron, cell)]) [-38] ! no existing xp def ! def: "The process whereby a relatively unspecialized cell acquires specialized features of a GABAergic interneuron residing in the cerebral cortex." ! PROPOSED: cell differentiation that OBO_REL:results_in_acquisition_of_features_of anon(GABAergic interneuron, cell) and OBO_REL:unfolds_in neocortex [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(GABAergic interneuron, cell), OBO_REL:unfolds_in=MA:0002754])] [Term] id: GO:0021892 ! cerebral cortex GABAergic interneuron differentiation intersection_of: GO:0030154 ! cell differentiation intersection_of: OBO_REL:results_in_acquisition_of_features_of cell:GABAergic_interneuron intersection_of: OBO_REL:unfolds_in MA:0002754 ! neocortex synonym: "neocortex GABAergic interneuron cell differentiation" EXACT [OBOL:automatic] synonym: "neocortex GABAergic interneuron differentiation" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021892: 10.3 ! No parse for: GO:0021893 cerebral cortex GABAergic interneuron fate commitment ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0021894 using "cerebral cortex GABAergic interneuron development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(GABAergic interneuron, anatomy), OBO_REL:unfolds_in=FBbt:00003625]) [-23] ! parse: GO:0021894 using "cerebral cortex GABAergic interneuron development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(GABAergic interneuron, anatomy), OBO_REL:unfolds_in=MA:0000185]) [-23] ! parse: GO:0021894 using "cerebral cortex GABAergic interneuron development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(GABAergic interneuron, anatomy), OBO_REL:unfolds_in=MA:0002754]) [-23] ! no existing xp def ! def: "The process whose specific outcome is the progression of a cerebral cortex GABAergic interneuron over time, from initial commitment to its fate, to the fully functional differentiated cell." ! PROPOSED: developmental process that results_in_complete_developmental_of anon(GABAergic interneuron, anatomy) and OBO_REL:unfolds_in neocortex [cdef(GO:0032502, [results_in_complete_developmental_of=anon(GABAergic interneuron, anatomy), OBO_REL:unfolds_in=MA:0002754])] [Term] id: GO:0021894 ! cerebral cortex GABAergic interneuron development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of anatomy:GABAergic_interneuron intersection_of: OBO_REL:unfolds_in MA:0002754 ! neocortex synonym: "neocortex GABAergic interneuron development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021894: 10.26 ! parse: GO:0021895 using "cerebral cortex neuron differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000540, OBO_REL:unfolds_in=FBbt:00003625]) [-3] ! parse: GO:0021895 using "cerebral cortex neuron differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000540, OBO_REL:unfolds_in=MA:0000185]) [-3] ! parse: GO:0021895 using "cerebral cortex neuron differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000540, OBO_REL:unfolds_in=MA:0002754]) [-3] ! parse: GO:0021895 using "cerebral cortex neuron differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(cerebral cortex neuron, cell)]) [-23] ! parse: GO:0021895 using "cerebral cortex neuron differentiation" => cdef(GO:0030182, [OBO_REL:results_in_acquisition_of_features_of=anon(cerebral cortex, cell)]) [-16] ! parse: GO:0021895 using "cerebral cortex neuron differentiation" => cdef(GO:0030182, [OBO_REL:results_in_developmental_progression_of=FBbt:00003625]) [-2] ! parse: GO:0021895 using "cerebral cortex neuron differentiation" => cdef(GO:0030182, [OBO_REL:results_in_developmental_progression_of=MA:0000185]) [-2] ! parse: GO:0021895 using "cerebral cortex neuron differentiation" => cdef(GO:0030182, [OBO_REL:results_in_developmental_progression_of=MA:0002754]) [-2] ! no existing xp def ! def: "The process whereby a relatively unspecialized cell acquires specialized features of a neuron residing in the cerebral cortex." ! PROPOSED: neuron differentiation that OBO_REL:results_in_developmental_progression_of neocortex [cdef(GO:0030182, [OBO_REL:results_in_developmental_progression_of=MA:0002754])] [Term] id: GO:0021895 ! cerebral cortex neuron differentiation intersection_of: GO:0030182 ! neuron differentiation intersection_of: OBO_REL:results_in_developmental_progression_of MA:0002754 ! neocortex synonym: "neocortex nerve cell cell differentiation" EXACT [OBOL:automatic] synonym: "neocortex nerve cell differentiation" EXACT [OBOL:automatic] synonym: "neocortex neuron cell differentiation" EXACT [OBOL:automatic] synonym: "neocortex neuron differentiation" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021895: 14.83 ! parse: GO:0021896 using "forebrain astrocyte differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000127, OBO_REL:unfolds_in=MA:0000170]) [-3] ! parse: GO:0021896 using "forebrain astrocyte differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000127, OBO_REL:unfolds_in=ZFA:0000109]) [-3] ! parse: GO:0021896 using "forebrain astrocyte differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000127, OBO_REL:unfolds_in=cell:forebrain]) [-3] ! parse: GO:0021896 using "forebrain astrocyte differentiation" => cdef(GO:0048708, [OBO_REL:results_in_acquisition_of_features_of=cell:forebrain]) [-2] ! parse: GO:0021896 using "forebrain astrocyte differentiation" => cdef(GO:0048708, [OBO_REL:results_in_developmental_progression_of=MA:0000170]) [-2] ! parse: GO:0021896 using "forebrain astrocyte differentiation" => cdef(GO:0048708, [OBO_REL:results_in_developmental_progression_of=ZFA:0000109]) [-2] ! parse: GO:0021896 using "forebrain astrocyte differentiation" => cdef(GO:0048708, [OBO_REL:results_in_developmental_progression_of=cell:forebrain]) [-2] ! no existing xp def ! def: "The process whereby a relatively unspecialized cell acquires the specialized features of an astrocyte residing in the forebrain. An astrocyte is the most abundant type of glial cell. Astrocytes provide support for neurons and regulate the environment in which they function." ! PROPOSED: astrocyte differentiation that OBO_REL:results_in_developmental_progression_of forebrain [cdef(GO:0048708, [OBO_REL:results_in_developmental_progression_of=cell:forebrain])] [Term] id: GO:0021896 ! forebrain astrocyte differentiation intersection_of: GO:0048708 ! astrocyte differentiation intersection_of: OBO_REL:results_in_developmental_progression_of cell:forebrain ! forebrain synonym: "forebrain astrocyte cell differentiation" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021896: 19.63 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0021897 using "forebrain astrocyte development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=CL:0000127, OBO_REL:unfolds_in=MA:0000170]) [-3] ! parse: GO:0021897 using "forebrain astrocyte development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=CL:0000127, OBO_REL:unfolds_in=ZFA:0000109]) [-3] ! parse: GO:0021897 using "forebrain astrocyte development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=CL:0000127, OBO_REL:unfolds_in=cell:forebrain]) [-3] ! parse: GO:0021897 using "forebrain astrocyte development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=ZFA:0009075, OBO_REL:unfolds_in=MA:0000170]) [-3] ! parse: GO:0021897 using "forebrain astrocyte development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=ZFA:0009075, OBO_REL:unfolds_in=ZFA:0000109]) [-3] ! parse: GO:0021897 using "forebrain astrocyte development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=ZFA:0009075, OBO_REL:unfolds_in=cell:forebrain]) [-3] ! parse: GO:0021897 using "forebrain astrocyte development" => cdef(GO:0032502, [results_in_complete_developmental_of=CL:0000127, OBO_REL:unfolds_in=MA:0000170]) [-3] ! parse: GO:0021897 using "forebrain astrocyte development" => cdef(GO:0032502, [results_in_complete_developmental_of=CL:0000127, OBO_REL:unfolds_in=ZFA:0000109]) [-3] ! parse: GO:0021897 using "forebrain astrocyte development" => cdef(GO:0032502, [results_in_complete_developmental_of=CL:0000127, OBO_REL:unfolds_in=cell:forebrain]) [-3] ! parse: GO:0021897 using "forebrain astrocyte development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0009075, OBO_REL:unfolds_in=MA:0000170]) [-3] ! parse: GO:0021897 using "forebrain astrocyte development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0009075, OBO_REL:unfolds_in=ZFA:0000109]) [-3] ! parse: GO:0021897 using "forebrain astrocyte development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0009075, OBO_REL:unfolds_in=cell:forebrain]) [-3] ! parse: GO:0021897 using "forebrain astrocyte development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(ZFA:0009075, [OBO_REL:part_of=MA:0000170])]) [-3] ! parse: GO:0021897 using "forebrain astrocyte development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(ZFA:0009075, [OBO_REL:part_of=ZFA:0000109])]) [-3] ! no existing xp def ! def: "The process aimed at the progression of an astrocyte that resides in the forebrain, from initial commitment of the cell to its fate, to the fully functional differentiated cell. An astrocyte is the most abundant type of glial cell. Astrocytes provide support for neurons and regulate the environment in which they function." ! PROPOSED: developmental process that results_in_complete_developmental_of cdef(ZFA:0009075, [OBO_REL:part_of=ZFA:0000109]) [cdef(GO:0032502, [results_in_complete_developmental_of=cdef(ZFA:0009075, [OBO_REL:part_of=ZFA:0000109])])] [Term] id: GO:0021897 ! forebrain astrocyte development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of forebrain_astrocyte synonym: "prosencephalon astrocyte development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021897: 20.11 ! Already have xp for: GO:0021899 fibroblast growth factor receptor signaling pathway involved in forebrain neuron fate commitment ! CURRENT : fibroblast growth factor receptor signaling pathway that OBO_REL:part_of forebrain neuron fate commitment [cdef(GO:0008543, [OBO_REL:part_of=GO:0021877])] ! parse: GO:0021900 using "ventricular zone cell fate commitment" => cdef(GO:0045165, [OBO_REL:results_in_commitment_to=CL:0000000, OBO_REL:unfolds_in=ZFA:0001083]) [-3] ! parse: GO:0021900 using "ventricular zone cell fate commitment" => cdef(GO:0045165, [OBO_REL:results_in_commitment_to=CL:0000000, OBO_REL:unfolds_in=cell:ventricular_zone]) [-3] ! parse: GO:0021900 using "ventricular zone cell fate commitment" => cdef(GO:0045165, [OBO_REL:results_in_commitment_to=cell:ventricular_zone]) [-2] ! no existing xp def ! def: "The commitment of neuroblast to become a basal progenitor cell. Basal progenitor cells are neuronal precursor cells that are committed to becoming neurons." ! PROPOSED: cell fate commitment that OBO_REL:results_in_commitment_to ventricular zone [cdef(GO:0045165, [OBO_REL:results_in_commitment_to=cell:ventricular_zone])] [Term] id: GO:0021900 ! ventricular zone cell fate commitment intersection_of: GO:0045165 ! cell fate commitment intersection_of: OBO_REL:results_in_commitment_to cell:ventricular_zone ! ventricular zone synonym: "ventricular zone commitment" EXACT [OBOL:automatic] synonym: "ventricular zone fate commitment" EXACT [OBOL:automatic] synonym: "ventricular zone lineage commitment" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021900: 20.52 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0021903 using "anterior-posterior neural tube patterning" => cdef(GO:0021532, [OBO_REL:results_in_developmental_progression_of=anon(anterior-posterior, anatomy)]) [-19] ! parse: GO:0021903 using "neocortex development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0002754]) [-2] ! parse: GO:0021903 using "rostrocaudal neural tube patterning" => cdef(GO:0021532, [OBO_REL:results_in_developmental_progression_of=anon(rostrocaudal, anatomy)]) [-13] ! no existing xp def ! def: "The process by which the neural tube is divided into specific regions along the rostrocaudal axis." ! PROPOSED: developmental process that results_in_complete_developmental_of neocortex [cdef(GO:0032502, [results_in_complete_developmental_of=MA:0002754])] [Term] id: GO:0021903 ! rostrocaudal neural tube patterning intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of MA:0002754 ! neocortex ! seconds spent parsing GO:0021903: 14.0 ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0021905 using "forebrain-midbrain boundary formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(- midbrain boundary, anatomy), OBO_REL:unfolds_in=MA:0000170]) [-21] ! parse: GO:0021905 using "forebrain-midbrain boundary formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(- midbrain boundary, anatomy), OBO_REL:unfolds_in=ZFA:0000109]) [-21] ! parse: GO:0021905 using "forebrain-midbrain boundary formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(- midbrain boundary, anatomy), OBO_REL:unfolds_in=cell:forebrain]) [-21] ! no existing xp def ! def: "The process whose specific outcome is the creation of the forebrain-midbrain boundary." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of anon(- midbrain boundary, anatomy) and OBO_REL:unfolds_in forebrain [cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(- midbrain boundary, anatomy), OBO_REL:unfolds_in=cell:forebrain])] [Term] id: GO:0021905 ! forebrain-midbrain boundary formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of anatomy:-_midbrain_boundary intersection_of: OBO_REL:unfolds_in cell:forebrain ! forebrain synonym: "forebrain-midbrain boundary anatomical structure formation" EXACT [OBOL:automatic] synonym: "forebrain-midbrain boundary formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021905: 11.34 ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0021906 using "hindbrain-spinal cord boundary formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(- spinal cord boundary, anatomy), OBO_REL:unfolds_in=MA:0000195]) [-24] ! parse: GO:0021906 using "hindbrain-spinal cord boundary formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(- spinal cord boundary, anatomy), OBO_REL:unfolds_in=ZFA:0000029]) [-24] ! no existing xp def ! def: "The process whose specific outcome is the formation of the hindbrain-spinal cord boundary." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of anon(- spinal cord boundary, anatomy) and OBO_REL:unfolds_in hindbrain [cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(- spinal cord boundary, anatomy), OBO_REL:unfolds_in=ZFA:0000029])] [Term] id: GO:0021906 ! hindbrain-spinal cord boundary formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of anatomy:-_spinal_cord_boundary intersection_of: OBO_REL:unfolds_in ZFA:0000029 ! hindbrain synonym: "rhombencephalon-spinal cord boundary anatomical structure formation" EXACT [OBOL:automatic] synonym: "rhombencephalon-spinal cord boundary formation" EXACT [OBOL:automatic] synonym: "rhombencephalon-spinal cord boundary formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021906: 10.46 ! Already have xp for: GO:0021907 fibroblast growth factor receptor signaling pathway in spinal cord anterior-posterior patterning ! CURRENT : fibroblast growth factor receptor signaling pathway that OBO_REL:unfolds_in spinal cord anterior-posterior patterning [cdef(GO:0008543, [OBO_REL:unfolds_in=cell:spinal_cord_anterior_-_posterior_patterning])] ! No relation defined: results_in_complete_developmental_of ! parse: GO:0021915 using "neural tube development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0001135]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the neural tube over time, from its formation to the mature structure. The mature structure of the neural tube exists when the tube has been segmented into the forebrain, midbrain, hindbrain and spinal cord regions. In addition neural crest has budded away from the epithelium." ! PROPOSED: developmental process that results_in_complete_developmental_of neural tube [cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0001135])] [Term] id: GO:0021915 ! neural tube development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of ZFA:0001135 ! neural tube synonym: "presumptive central nervous system development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021915: 4.99 ! No parse for: GO:0021917 somatic motor neuron fate commitment ! parse: GO:0021919 using "BMP signaling pathway in spinal cord dorsal-ventral patterning" => cdef(GO:0021513, [OBO_REL:results_in_developmental_progression_of=anon(BMP signaling pathway in, anatomy)]) [-25] ! parse: GO:0021919 using "BMP signalling pathway in spinal cord dorsal-ventral patterning" => cdef(GO:0021513, [OBO_REL:results_in_developmental_progression_of=anon(BMP signalling pathway in, anatomy)]) [-26] ! parse: GO:0021919 using "bone morphogenetic protein signaling pathway in spinal cord dorsal-ventral patterning" => cdef(GO:0021513, [OBO_REL:results_in_developmental_progression_of=anon(morphogenetic protein signaling pathway in, anatomy), OBO_REL:unfolds_in=MA:0001459]) [-44] ! parse: GO:0021919 using "bone morphogenetic protein signalling pathway in spinal cord dorsal-ventral patterning" => cdef(GO:0021513, [OBO_REL:results_in_developmental_progression_of=anon(morphogenetic protein signalling pathway in, anatomy), OBO_REL:unfolds_in=MA:0001459]) [-45] ! no existing xp def ! def: "A series of molecular signals generated as a consequence of any member of the BMP (bone morphogenetic protein) family binding to a cell surface receptor that results in the spatial identity of regions along the dorsal-ventral axis of the spinal cord." ! PROPOSED: spinal cord dorsal-ventral patterning that OBO_REL:results_in_developmental_progression_of anon(BMP signaling pathway in, anatomy) [cdef(GO:0021513, [OBO_REL:results_in_developmental_progression_of=anon(BMP signaling pathway in, anatomy)])] [Term] id: GO:0021919 ! BMP signaling pathway in spinal cord dorsal-ventral patterning intersection_of: GO:0021513 ! spinal cord dorsal-ventral patterning intersection_of: OBO_REL:results_in_developmental_progression_of anatomy:BMP_signaling_pathway_in ! seconds spent parsing GO:0021919: 31.24 ! Already have xp for: GO:0021923 cell proliferation in the hindbrain ventricular zone ! CURRENT : cell proliferation that OBO_REL:unfolds_in hindbrain ventricular zone [cdef(GO:0008283, [OBO_REL:unfolds_in=continuant:hindbrain_ventricular_zone])] ! Already have xp for: GO:0021924 cell proliferation in the external granule layer ! CURRENT : cell proliferation that OBO_REL:unfolds_in external granule layer [cdef(GO:0008283, [OBO_REL:unfolds_in=continuant:external_granule_layer])] ! Already have xp for: GO:0021925 Purkinje cell precursor proliferation ! CURRENT : cell proliferation that OBO_REL:increases_population_size_of Purkinje_cell_precursor [cdef(GO:0008283, [OBO_REL:increases_population_size_of=Purkinje_cell_precursor])] ! Already have xp for: GO:0021926 Golgi cell precursor proliferation ! CURRENT : cell proliferation that OBO_REL:increases_population_size_of Golgi_cell_precursor [cdef(GO:0008283, [OBO_REL:increases_population_size_of=Golgi_cell_precursor])] ! Already have xp for: GO:0021928 basket cell precursor proliferation ! CURRENT : cell proliferation that OBO_REL:increases_population_size_of basket_cell_precursor [cdef(GO:0008283, [OBO_REL:increases_population_size_of=basket_cell_precursor])] ! Already have xp for: GO:0021929 stellate cell precursor proliferation ! CURRENT : cell proliferation that OBO_REL:increases_population_size_of stellate_cell_precursor [cdef(GO:0008283, [OBO_REL:increases_population_size_of=stellate_cell_precursor])] ! Already have xp for: GO:0021930 granule cell precursor proliferation ! CURRENT : cell proliferation that OBO_REL:increases_population_size_of granule_cell_precursor [cdef(GO:0008283, [OBO_REL:increases_population_size_of=granule_cell_precursor])] ! No parse for: GO:0021932 hindbrain radial glia guided cell migration ! No parse for: GO:0021933 radial glia guided migration of granule cell ! No parse for: GO:0021934 hindbrain tangential cell migration ! No parse for: GO:0021935 granule cell precursor tangential migration ! Already have xp for: GO:0021937 Purkinje cell-granule cell precursor cell signaling involved in regulation of granule cell precursor cell proliferation ! CURRENT : Purkinje_cell_-_granule_cell_precursor_signal_transduction that OBO_REL:part_of regulation_of_granule_cell_precursor_proliferation [cdef(Purkinje_cell_-_granule_cell_precursor_signal_transduction, [OBO_REL:part_of=regulation_of_granule_cell_precursor_proliferation])] ! parse: GO:0021939 using "extracellular matrix-granule cell signaling involved in regulation of granule cell precursor proliferation" => cdef(cdef(GO:0007165, [OBO_REL:has_agent=GO:0031012, OBO_REL:has_agent=CL:0000120]), [OBO_REL:part_of=GO:0021936]) [-4] ! parse: GO:0021939 using "extracellular matrix-granule cell signaling involved in regulation of granule cell precursor proliferation" => cdef(cdef(GO:0007165, [OBO_REL:has_agent=GO:0031012, OBO_REL:has_agent=CL:0000120]), [OBO_REL:part_of=cdef(GO:0065007, [OBO_REL:regulates=GO:0021930])]) [-5] ! parse: GO:0021939 using "extracellular matrix-granule cell signaling involved in regulation of granule cell precursor proliferation" => cdef(cdef(GO:0007165, [OBO_REL:has_agent=GO:0031012, OBO_REL:has_agent=CL:0000120]), [OBO_REL:part_of=cdef(GO:0065007, [OBO_REL:regulates=cdef(GO:0008283, [OBO_REL:increases_population_size_of=cdef(CL:0000000, [OBO_REL:develops_into=CL:0000120])])])]) [-7] ! parse: GO:0021939 using "extracellular matrix-granule cell signaling involved in regulation of granule cell precursor proliferation" => cdef(cdef(GO:0007165, [OBO_REL:has_agent=GO:0031012, OBO_REL:has_agent=CL:0000120]), [OBO_REL:part_of=cdef(GO:0065007, [OBO_REL:regulates=cdef(ZFA:0000098, [OBO_REL:results_in_division_of=cdef(CL:0000000, [OBO_REL:develops_into=CL:0000120])])])]) [-7] ! parse: GO:0021939 using "extracellular matrix-granule cell signaling involved in regulation of granule cell precursor proliferation" => cdef(cdef(GO:0007165, [OBO_REL:has_agent=GO:0031012, OBO_REL:has_agent=ZFA:0009070]), [OBO_REL:part_of=GO:0021936]) [-4] ! parse: GO:0021939 using "extracellular matrix-granule cell signaling involved in regulation of granule cell precursor proliferation" => cdef(cdef(GO:0007165, [OBO_REL:has_agent=GO:0031012, OBO_REL:has_agent=ZFA:0009070]), [OBO_REL:part_of=cdef(GO:0065007, [OBO_REL:regulates=GO:0021930])]) [-5] ! parse: GO:0021939 using "extracellular matrix-granule cell signaling involved in regulation of granule cell precursor proliferation" => cdef(cdef(GO:0007165, [OBO_REL:has_agent=GO:0031012, OBO_REL:has_agent=ZFA:0009070]), [OBO_REL:part_of=cdef(GO:0065007, [OBO_REL:regulates=cdef(GO:0008283, [OBO_REL:increases_population_size_of=cdef(CL:0000000, [OBO_REL:develops_into=CL:0000120])])])]) [-7] ! parse: GO:0021939 using "extracellular matrix-granule cell signaling involved in regulation of granule cell precursor proliferation" => cdef(cdef(GO:0007165, [OBO_REL:has_agent=GO:0031012, OBO_REL:has_agent=ZFA:0009070]), [OBO_REL:part_of=cdef(GO:0065007, [OBO_REL:regulates=cdef(ZFA:0000098, [OBO_REL:results_in_division_of=cdef(CL:0000000, [OBO_REL:develops_into=CL:0000120])])])]) [-7] ! parse: GO:0021939 using "extracellular matrix-granule cell signalling involved in regulation of granule cell precursor proliferation" => cdef(cdef(GO:0007165, [OBO_REL:has_agent=GO:0031012, OBO_REL:has_agent=CL:0000120]), [OBO_REL:part_of=GO:0021936]) [-4] ! parse: GO:0021939 using "extracellular matrix-granule cell signalling involved in regulation of granule cell precursor proliferation" => cdef(cdef(GO:0007165, [OBO_REL:has_agent=GO:0031012, OBO_REL:has_agent=CL:0000120]), [OBO_REL:part_of=cdef(GO:0065007, [OBO_REL:regulates=GO:0021930])]) [-5] ! parse: GO:0021939 using "extracellular matrix-granule cell signalling involved in regulation of granule cell precursor proliferation" => cdef(cdef(GO:0007165, [OBO_REL:has_agent=GO:0031012, OBO_REL:has_agent=CL:0000120]), [OBO_REL:part_of=cdef(GO:0065007, [OBO_REL:regulates=cdef(GO:0008283, [OBO_REL:increases_population_size_of=cdef(CL:0000000, [OBO_REL:develops_into=CL:0000120])])])]) [-7] ! parse: GO:0021939 using "extracellular matrix-granule cell signalling involved in regulation of granule cell precursor proliferation" => cdef(cdef(GO:0007165, [OBO_REL:has_agent=GO:0031012, OBO_REL:has_agent=CL:0000120]), [OBO_REL:part_of=cdef(GO:0065007, [OBO_REL:regulates=cdef(ZFA:0000098, [OBO_REL:results_in_division_of=cdef(CL:0000000, [OBO_REL:develops_into=CL:0000120])])])]) [-7] ! parse: GO:0021939 using "extracellular matrix-granule cell signalling involved in regulation of granule cell precursor proliferation" => cdef(cdef(GO:0007165, [OBO_REL:has_agent=GO:0031012, OBO_REL:has_agent=ZFA:0009070]), [OBO_REL:part_of=GO:0021936]) [-4] ! parse: GO:0021939 using "extracellular matrix-granule cell signalling involved in regulation of granule cell precursor proliferation" => cdef(cdef(GO:0007165, [OBO_REL:has_agent=GO:0031012, OBO_REL:has_agent=ZFA:0009070]), [OBO_REL:part_of=cdef(GO:0065007, [OBO_REL:regulates=GO:0021930])]) [-5] ! parse: GO:0021939 using "extracellular matrix-granule cell signalling involved in regulation of granule cell precursor proliferation" => cdef(cdef(GO:0007165, [OBO_REL:has_agent=GO:0031012, OBO_REL:has_agent=ZFA:0009070]), [OBO_REL:part_of=cdef(GO:0065007, [OBO_REL:regulates=cdef(GO:0008283, [OBO_REL:increases_population_size_of=cdef(CL:0000000, [OBO_REL:develops_into=CL:0000120])])])]) [-7] ! parse: GO:0021939 using "extracellular matrix-granule cell signalling involved in regulation of granule cell precursor proliferation" => cdef(cdef(GO:0007165, [OBO_REL:has_agent=GO:0031012, OBO_REL:has_agent=ZFA:0009070]), [OBO_REL:part_of=cdef(GO:0065007, [OBO_REL:regulates=cdef(ZFA:0000098, [OBO_REL:results_in_division_of=cdef(CL:0000000, [OBO_REL:develops_into=CL:0000120])])])]) [-7] ! no existing xp def ! def: "The process that mediates the transfer of information from the extracellular matrix to granule cell precursors resulting in a decrease in rate of granule cell precursor cell proliferation." ! PROPOSED: cdef(GO:0007165, [OBO_REL:has_agent=GO:0031012, OBO_REL:has_agent=ZFA:0009070]) that OBO_REL:part_of regulation of granule cell precursor proliferation [cdef(cdef(GO:0007165, [OBO_REL:has_agent=GO:0031012, OBO_REL:has_agent=ZFA:0009070]), [OBO_REL:part_of=GO:0021936])] [Term] id: GO:0021939 ! extracellular matrix-granule cell signaling involved in regulation of granule cell precursor proliferation intersection_of: cdef('GO:0007165', ['OBO_REL:has_agent'='GO:0031012', 'OBO_REL:has_agent'='ZFA:0009070']) intersection_of: OBO_REL:part_of GO:0021936 ! regulation of granule cell precursor proliferation ! seconds spent parsing GO:0021939: 63.7 ! No parse for: GO:0021942 radial glia guided migration of Purkinje cell ! Already have xp for: GO:0021944 neuronal-glial interaction involved in hindbrain glial-mediated radial cell migration ! CURRENT : radial_cell_migration that OBO_REL:mediated_by neuronal-glial interaction involved in hindbrain glial- [cdef(radial_cell_migration, [OBO_REL:mediated_by=cell:neuronal_-_glial_interaction_involved_in_hindbrain_glial_-])] ! No parse for: GO:0021949 brainstem precerebellar neuron precursor migration ! parse: GO:0021952 using "central nervous system projection neuron axonogenesis" => cdef(GO:0007409, [OBO_REL:results_in_developmental_progression_of=CL:0000598, OBO_REL:unfolds_in=FBbt:00005094]) [-3] ! parse: GO:0021952 using "central nervous system projection neuron axonogenesis" => cdef(GO:0007409, [OBO_REL:results_in_developmental_progression_of=CL:0000598, OBO_REL:unfolds_in=MA:0000167]) [-3] ! parse: GO:0021952 using "central nervous system projection neuron axonogenesis" => cdef(GO:0007409, [OBO_REL:results_in_developmental_progression_of=CL:0000598, OBO_REL:unfolds_in=ZFA:0000012]) [-3] ! no existing xp def ! def: "Generation of a long process of a CNS neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells in a different central nervous system region." ! PROPOSED: axonogenesis that OBO_REL:results_in_developmental_progression_of pyramidal cell and OBO_REL:unfolds_in central nervous system [cdef(GO:0007409, [OBO_REL:results_in_developmental_progression_of=CL:0000598, OBO_REL:unfolds_in=ZFA:0000012])] [Term] id: GO:0021952 ! central nervous system projection neuron axonogenesis intersection_of: GO:0007409 ! axonogenesis intersection_of: OBO_REL:results_in_developmental_progression_of CL:0000598 ! pyramidal cell intersection_of: OBO_REL:unfolds_in ZFA:0000012 ! central nervous system synonym: "cns projection neuron axonogenesis" EXACT [OBOL:automatic] synonym: "cns pyramidal cell axonogenesis" EXACT [OBOL:automatic] synonym: "cns pyramidal neuron axonogenesis" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021952: 13.51 ! parse: GO:0021953 using "central nervous system neuron differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000540, OBO_REL:unfolds_in=FBbt:00005094]) [-3] ! parse: GO:0021953 using "central nervous system neuron differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000540, OBO_REL:unfolds_in=MA:0000167]) [-3] ! parse: GO:0021953 using "central nervous system neuron differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000540, OBO_REL:unfolds_in=ZFA:0000012]) [-3] ! parse: GO:0021953 using "central nervous system neuron differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(central nervous system neuron, cell)]) [-30] ! parse: GO:0021953 using "central nervous system neuron differentiation" => cdef(GO:0030182, [OBO_REL:results_in_acquisition_of_features_of=anon(central nervous system, cell)]) [-23] ! parse: GO:0021953 using "central nervous system neuron differentiation" => cdef(GO:0030182, [OBO_REL:results_in_developmental_progression_of=FBbt:00005094]) [-2] ! parse: GO:0021953 using "central nervous system neuron differentiation" => cdef(GO:0030182, [OBO_REL:results_in_developmental_progression_of=MA:0000167]) [-2] ! parse: GO:0021953 using "central nervous system neuron differentiation" => cdef(GO:0030182, [OBO_REL:results_in_developmental_progression_of=ZFA:0000012]) [-2] ! no existing xp def ! def: "The process whereby a relatively unspecialized cell acquires specialized features of a neuron whose cell body resides in the central nervous system." ! PROPOSED: neuron differentiation that OBO_REL:results_in_developmental_progression_of central nervous system [cdef(GO:0030182, [OBO_REL:results_in_developmental_progression_of=ZFA:0000012])] [Term] id: GO:0021953 ! central nervous system neuron differentiation intersection_of: GO:0030182 ! neuron differentiation intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0000012 ! central nervous system synonym: "cns nerve cell cell differentiation" EXACT [OBOL:automatic] synonym: "cns nerve cell differentiation" EXACT [OBOL:automatic] synonym: "cns neuron cell differentiation" EXACT [OBOL:automatic] synonym: "cns neuron differentiation" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021953: 15.41 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0021954 using "central nervous system neuron development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=CL:0000540, OBO_REL:unfolds_in=FBbt:00005094]) [-3] ! parse: GO:0021954 using "central nervous system neuron development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=CL:0000540, OBO_REL:unfolds_in=MA:0000167]) [-3] ! parse: GO:0021954 using "central nervous system neuron development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=CL:0000540, OBO_REL:unfolds_in=ZFA:0000012]) [-3] ! parse: GO:0021954 using "central nervous system neuron development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=FBbt:00005106, OBO_REL:unfolds_in=FBbt:00005094]) [-3] ! parse: GO:0021954 using "central nervous system neuron development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=FBbt:00005106, OBO_REL:unfolds_in=MA:0000167]) [-3] ! parse: GO:0021954 using "central nervous system neuron development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=FBbt:00005106, OBO_REL:unfolds_in=ZFA:0000012]) [-3] ! parse: GO:0021954 using "central nervous system neuron development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=ZFA:0009248, OBO_REL:unfolds_in=FBbt:00005094]) [-3] ! parse: GO:0021954 using "central nervous system neuron development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=ZFA:0009248, OBO_REL:unfolds_in=MA:0000167]) [-3] ! parse: GO:0021954 using "central nervous system neuron development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=ZFA:0009248, OBO_REL:unfolds_in=ZFA:0000012]) [-3] ! parse: GO:0021954 using "central nervous system neuron development" => cdef(GO:0032502, [results_in_complete_developmental_of=CL:0000540, OBO_REL:unfolds_in=FBbt:00005094]) [-3] ! parse: GO:0021954 using "central nervous system neuron development" => cdef(GO:0032502, [results_in_complete_developmental_of=CL:0000540, OBO_REL:unfolds_in=MA:0000167]) [-3] ! parse: GO:0021954 using "central nervous system neuron development" => cdef(GO:0032502, [results_in_complete_developmental_of=CL:0000540, OBO_REL:unfolds_in=ZFA:0000012]) [-3] ! parse: GO:0021954 using "central nervous system neuron development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00005106, OBO_REL:unfolds_in=FBbt:00005094]) [-3] ! parse: GO:0021954 using "central nervous system neuron development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00005106, OBO_REL:unfolds_in=MA:0000167]) [-3] ! parse: GO:0021954 using "central nervous system neuron development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00005106, OBO_REL:unfolds_in=ZFA:0000012]) [-3] ! parse: GO:0021954 using "central nervous system neuron development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0009248, OBO_REL:unfolds_in=FBbt:00005094]) [-3] ! parse: GO:0021954 using "central nervous system neuron development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0009248, OBO_REL:unfolds_in=MA:0000167]) [-3] ! parse: GO:0021954 using "central nervous system neuron development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0009248, OBO_REL:unfolds_in=ZFA:0000012]) [-3] ! parse: GO:0021954 using "central nervous system neuron development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(FBbt:00005106, [OBO_REL:part_of=FBbt:00005094])]) [-3] ! parse: GO:0021954 using "central nervous system neuron development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(FBbt:00005106, [OBO_REL:part_of=MA:0000167])]) [-3] ! parse: GO:0021954 using "central nervous system neuron development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(FBbt:00005106, [OBO_REL:part_of=ZFA:0000012])]) [-3] ! parse: GO:0021954 using "central nervous system neuron development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(ZFA:0009248, [OBO_REL:part_of=FBbt:00005094])]) [-3] ! parse: GO:0021954 using "central nervous system neuron development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(ZFA:0009248, [OBO_REL:part_of=MA:0000167])]) [-3] ! parse: GO:0021954 using "central nervous system neuron development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(ZFA:0009248, [OBO_REL:part_of=ZFA:0000012])]) [-3] ! no existing xp def ! def: "The process whose specific outcome is the progression of a neuron whose cell body is located in the central nervous system, from initial commitment of the cell to a neuronal fate, to the fully functional differentiated neuron." ! PROPOSED: developmental process that results_in_complete_developmental_of cdef(ZFA:0009248, [OBO_REL:part_of=ZFA:0000012]) [cdef(GO:0032502, [results_in_complete_developmental_of=cdef(ZFA:0009248, [OBO_REL:part_of=ZFA:0000012])])] [Term] id: GO:0021954 ! central nervous system neuron development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of central_nervous_system_neuron synonym: "cns neuron development" EXACT [OBOL:automatic] synonym: "neuron of central nervous system development" EXACT [OBOL:automatic] synonym: "neuron of the central nervous system development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021954: 16.13 ! parse: GO:0021955 using "central nervous system neuron axonogenesis" => cdef(GO:0007409, [OBO_REL:results_in_developmental_progression_of=CL:0000540, OBO_REL:unfolds_in=FBbt:00005094]) [-3] ! parse: GO:0021955 using "central nervous system neuron axonogenesis" => cdef(GO:0007409, [OBO_REL:results_in_developmental_progression_of=CL:0000540, OBO_REL:unfolds_in=MA:0000167]) [-3] ! parse: GO:0021955 using "central nervous system neuron axonogenesis" => cdef(GO:0007409, [OBO_REL:results_in_developmental_progression_of=CL:0000540, OBO_REL:unfolds_in=ZFA:0000012]) [-3] ! parse: GO:0021955 using "central nervous system neuron axonogenesis" => cdef(GO:0007409, [OBO_REL:results_in_developmental_progression_of=FBbt:00005106, OBO_REL:unfolds_in=FBbt:00005094]) [-3] ! parse: GO:0021955 using "central nervous system neuron axonogenesis" => cdef(GO:0007409, [OBO_REL:results_in_developmental_progression_of=FBbt:00005106, OBO_REL:unfolds_in=MA:0000167]) [-3] ! parse: GO:0021955 using "central nervous system neuron axonogenesis" => cdef(GO:0007409, [OBO_REL:results_in_developmental_progression_of=FBbt:00005106, OBO_REL:unfolds_in=ZFA:0000012]) [-3] ! parse: GO:0021955 using "central nervous system neuron axonogenesis" => cdef(GO:0007409, [OBO_REL:results_in_developmental_progression_of=ZFA:0009248, OBO_REL:unfolds_in=FBbt:00005094]) [-3] ! parse: GO:0021955 using "central nervous system neuron axonogenesis" => cdef(GO:0007409, [OBO_REL:results_in_developmental_progression_of=ZFA:0009248, OBO_REL:unfolds_in=MA:0000167]) [-3] ! parse: GO:0021955 using "central nervous system neuron axonogenesis" => cdef(GO:0007409, [OBO_REL:results_in_developmental_progression_of=ZFA:0009248, OBO_REL:unfolds_in=ZFA:0000012]) [-3] ! parse: GO:0021955 using "central nervous system neuron axonogenesis" => cdef(GO:0007409, [OBO_REL:results_in_developmental_progression_of=cdef(FBbt:00005106, [OBO_REL:part_of=FBbt:00005094])]) [-3] ! parse: GO:0021955 using "central nervous system neuron axonogenesis" => cdef(GO:0007409, [OBO_REL:results_in_developmental_progression_of=cdef(FBbt:00005106, [OBO_REL:part_of=MA:0000167])]) [-3] ! parse: GO:0021955 using "central nervous system neuron axonogenesis" => cdef(GO:0007409, [OBO_REL:results_in_developmental_progression_of=cdef(FBbt:00005106, [OBO_REL:part_of=ZFA:0000012])]) [-3] ! parse: GO:0021955 using "central nervous system neuron axonogenesis" => cdef(GO:0007409, [OBO_REL:results_in_developmental_progression_of=cdef(ZFA:0009248, [OBO_REL:part_of=FBbt:00005094])]) [-3] ! parse: GO:0021955 using "central nervous system neuron axonogenesis" => cdef(GO:0007409, [OBO_REL:results_in_developmental_progression_of=cdef(ZFA:0009248, [OBO_REL:part_of=MA:0000167])]) [-3] ! parse: GO:0021955 using "central nervous system neuron axonogenesis" => cdef(GO:0007409, [OBO_REL:results_in_developmental_progression_of=cdef(ZFA:0009248, [OBO_REL:part_of=ZFA:0000012])]) [-3] ! no existing xp def ! def: "Generation of a long process from a neuron whose cell body resides in the central nervous system. The process carries efferent (outgoing) action potentials from the cell body towards target cells." ! PROPOSED: axonogenesis that OBO_REL:results_in_developmental_progression_of cdef(ZFA:0009248, [OBO_REL:part_of=ZFA:0000012]) [cdef(GO:0007409, [OBO_REL:results_in_developmental_progression_of=cdef(ZFA:0009248, [OBO_REL:part_of=ZFA:0000012])])] [Term] id: GO:0021955 ! central nervous system neuron axonogenesis intersection_of: GO:0007409 ! axonogenesis intersection_of: OBO_REL:results_in_developmental_progression_of central_nervous_system_neuron ! seconds spent parsing GO:0021955: 22.92 ! parse: GO:0021956 using "central nervous system interneuron axonogenesis" => cdef(GO:0007409, [OBO_REL:results_in_developmental_progression_of=CL:0000099, OBO_REL:unfolds_in=FBbt:00005094]) [-3] ! parse: GO:0021956 using "central nervous system interneuron axonogenesis" => cdef(GO:0007409, [OBO_REL:results_in_developmental_progression_of=CL:0000099, OBO_REL:unfolds_in=MA:0000167]) [-3] ! parse: GO:0021956 using "central nervous system interneuron axonogenesis" => cdef(GO:0007409, [OBO_REL:results_in_developmental_progression_of=CL:0000099, OBO_REL:unfolds_in=ZFA:0000012]) [-3] ! parse: GO:0021956 using "central nervous system interneuron axonogenesis" => cdef(GO:0007409, [OBO_REL:results_in_developmental_progression_of=FBbt:00005125, OBO_REL:unfolds_in=FBbt:00005094]) [-3] ! parse: GO:0021956 using "central nervous system interneuron axonogenesis" => cdef(GO:0007409, [OBO_REL:results_in_developmental_progression_of=FBbt:00005125, OBO_REL:unfolds_in=MA:0000167]) [-3] ! parse: GO:0021956 using "central nervous system interneuron axonogenesis" => cdef(GO:0007409, [OBO_REL:results_in_developmental_progression_of=FBbt:00005125, OBO_REL:unfolds_in=ZFA:0000012]) [-3] ! parse: GO:0021956 using "central nervous system interneuron axonogenesis" => cdef(GO:0007409, [OBO_REL:results_in_developmental_progression_of=ZFA:0009051, OBO_REL:unfolds_in=FBbt:00005094]) [-3] ! parse: GO:0021956 using "central nervous system interneuron axonogenesis" => cdef(GO:0007409, [OBO_REL:results_in_developmental_progression_of=ZFA:0009051, OBO_REL:unfolds_in=MA:0000167]) [-3] ! parse: GO:0021956 using "central nervous system interneuron axonogenesis" => cdef(GO:0007409, [OBO_REL:results_in_developmental_progression_of=ZFA:0009051, OBO_REL:unfolds_in=ZFA:0000012]) [-3] ! parse: GO:0021956 using "central nervous system interneuron axonogenesis" => cdef(GO:0007409, [OBO_REL:results_in_developmental_progression_of=cdef(FBbt:00005125, [OBO_REL:part_of=FBbt:00005094])]) [-3] ! parse: GO:0021956 using "central nervous system interneuron axonogenesis" => cdef(GO:0007409, [OBO_REL:results_in_developmental_progression_of=cdef(FBbt:00005125, [OBO_REL:part_of=MA:0000167])]) [-3] ! parse: GO:0021956 using "central nervous system interneuron axonogenesis" => cdef(GO:0007409, [OBO_REL:results_in_developmental_progression_of=cdef(FBbt:00005125, [OBO_REL:part_of=ZFA:0000012])]) [-3] ! parse: GO:0021956 using "central nervous system interneuron axonogenesis" => cdef(GO:0007409, [OBO_REL:results_in_developmental_progression_of=cdef(ZFA:0009051, [OBO_REL:part_of=FBbt:00005094])]) [-3] ! parse: GO:0021956 using "central nervous system interneuron axonogenesis" => cdef(GO:0007409, [OBO_REL:results_in_developmental_progression_of=cdef(ZFA:0009051, [OBO_REL:part_of=MA:0000167])]) [-3] ! parse: GO:0021956 using "central nervous system interneuron axonogenesis" => cdef(GO:0007409, [OBO_REL:results_in_developmental_progression_of=cdef(ZFA:0009051, [OBO_REL:part_of=ZFA:0000012])]) [-3] ! no existing xp def ! def: "Generation of a long process that carries efferent (outgoing) action potentials from the cell body towards target cells from a neuron located in the central nervous system whose axons remain within a single brain region." ! PROPOSED: axonogenesis that OBO_REL:results_in_developmental_progression_of cdef(ZFA:0009051, [OBO_REL:part_of=ZFA:0000012]) [cdef(GO:0007409, [OBO_REL:results_in_developmental_progression_of=cdef(ZFA:0009051, [OBO_REL:part_of=ZFA:0000012])])] [Term] id: GO:0021956 ! central nervous system interneuron axonogenesis intersection_of: GO:0007409 ! axonogenesis intersection_of: OBO_REL:results_in_developmental_progression_of central_nervous_system_interneuron synonym: "cns interneuron axonogenesis" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021956: 22.97 ! parse: GO:0021958 using "gracilis tract morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00005100, OBO_REL:unfolds_in=FBbt:00003277]) [-3] ! parse: GO:0021958 using "gracilis tract morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00005100, OBO_REL:unfolds_in=MA:0002311]) [-3] ! parse: GO:0021958 using "gracilis tract morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=cdef(FBbt:00005100, [OBO_REL:part_of=FBbt:00003277])]) [-3] ! parse: GO:0021958 using "gracilis tract morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=cdef(FBbt:00005100, [OBO_REL:part_of=MA:0002311])]) [-3] ! parse: GO:0021958 using "tract of Goll morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(of Goll, anatomy), OBO_REL:unfolds_in=FBbt:00005100]) [-9] ! no existing xp def ! def: "Generation of a long process of a CNS neuron, that carries efferent (outgoing) action potentials from the cell body in the dorsal root ganglion towards target cells in the medulla. This axonal processes is a member of those that make up the gracilis tract, a group of axons that are from neurons involved in proprioception from the lower trunk and lower limb." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of cdef(FBbt:00005100, [OBO_REL:part_of=MA:0002311]) [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=cdef(FBbt:00005100, [OBO_REL:part_of=MA:0002311])])] [Term] id: GO:0021958 ! gracilis tract morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of gracilis_tract ! seconds spent parsing GO:0021958: 21.36 ! parse: GO:0021959 using "cuneatus tract morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(cuneatus tract, anatomy)]) [-15] ! parse: GO:0021959 using "tract of Burdach morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(of Burdach, anatomy), OBO_REL:unfolds_in=FBbt:00005100]) [-12] ! no existing xp def ! def: "Generation of a long process of a CNS neuron, that carries efferent (outgoing) action potentials from the cell body in the dorsal root ganglion towards target cells in the medulla. This axonal processes is a member of those that make up the cuneatus tract, a group of axons that are from neurons involved in proprioception from the upper trunk and upper limb." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of anon(of Burdach, anatomy) and OBO_REL:unfolds_in tract [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(of Burdach, anatomy), OBO_REL:unfolds_in=FBbt:00005100])] [Term] id: GO:0021959 ! cuneatus tract morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of anatomy:of_Burdach intersection_of: OBO_REL:unfolds_in FBbt:00005100 ! tract ! seconds spent parsing GO:0021959: 13.02 ! parse: GO:0021960 using "anterior commissure morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00001105]) [-2] ! parse: GO:0021960 using "anterior commissure morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0002722]) [-2] ! parse: GO:0021960 using "anterior commissure morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0001108]) [-2] ! no existing xp def ! def: "Generation of a long process of a CNS neuron, that carries efferent (outgoing) action potentials from the cell body in one half of the cerebral cortex towards target cells in the contralateral half. This axonal processes is a member of those that make up the anterior commissure, a small midline fiber tract that lies at the anterior end of the corpus callosum." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of anterior commissure [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0001108])] [Term] id: GO:0021960 ! anterior commissure morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0001108 ! anterior commissure synonym: "commissura anterior anatomical structure morphogenesis" EXACT [OBOL:automatic] synonym: "commissura anterior morphogenesis" EXACT [OBOL:automatic] synonym: "commissura rostral anatomical structure morphogenesis" EXACT [OBOL:automatic] synonym: "commissura rostral morphogenesis" EXACT [OBOL:automatic] synonym: "rostral commissure anatomical structure morphogenesis" EXACT [OBOL:automatic] synonym: "rostral commissure morphogenesis" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021960: 7.56 ! parse: GO:0021961 using "posterior commissure morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00001120]) [-2] ! parse: GO:0021961 using "posterior commissure morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0002743]) [-2] ! no existing xp def ! def: "Generation of a long process of a CNS neuron, that carries efferent (outgoing) action potentials from the cell body in the midbrain towards target cells in the diencephalon." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of posterior commissure [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0002743])] [Term] id: GO:0021961 ! posterior commissure morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of MA:0002743 ! posterior commissure ! seconds spent parsing GO:0021961: 6.51 ! parse: GO:0021965 using "spinal cord ventral commissure morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00000336, OBO_REL:unfolds_in=MA:0000216]) [-3] ! parse: GO:0021965 using "spinal cord ventral commissure morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00000336, OBO_REL:unfolds_in=ZFA:0000075]) [-3] ! parse: GO:0021965 using "spinal cord ventral commissure morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00000336, OBO_REL:unfolds_in=cell:spinal_cord]) [-3] ! parse: GO:0021965 using "spinal cord ventral commissure morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00005593, OBO_REL:unfolds_in=MA:0000216]) [-3] ! parse: GO:0021965 using "spinal cord ventral commissure morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00005593, OBO_REL:unfolds_in=ZFA:0000075]) [-3] ! parse: GO:0021965 using "spinal cord ventral commissure morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00005593, OBO_REL:unfolds_in=cell:spinal_cord]) [-3] ! parse: GO:0021965 using "spinal cord ventral commissure morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00005594, OBO_REL:unfolds_in=MA:0000216]) [-3] ! parse: GO:0021965 using "spinal cord ventral commissure morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00005594, OBO_REL:unfolds_in=ZFA:0000075]) [-3] ! parse: GO:0021965 using "spinal cord ventral commissure morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00005594, OBO_REL:unfolds_in=cell:spinal_cord]) [-3] ! parse: GO:0021965 using "spinal cord ventral commissure morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=cdef(FBbt:00000336, [OBO_REL:part_of=MA:0000216])]) [-3] ! parse: GO:0021965 using "spinal cord ventral commissure morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=cdef(FBbt:00000336, [OBO_REL:part_of=ZFA:0000075])]) [-3] ! parse: GO:0021965 using "spinal cord ventral commissure morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=cdef(FBbt:00005593, [OBO_REL:part_of=MA:0000216])]) [-3] ! parse: GO:0021965 using "spinal cord ventral commissure morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=cdef(FBbt:00005593, [OBO_REL:part_of=ZFA:0000075])]) [-3] ! parse: GO:0021965 using "spinal cord ventral commissure morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=cdef(FBbt:00005594, [OBO_REL:part_of=MA:0000216])]) [-3] ! parse: GO:0021965 using "spinal cord ventral commissure morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=cdef(FBbt:00005594, [OBO_REL:part_of=ZFA:0000075])]) [-3] ! no existing xp def ! def: "The process by which the anatomical structures of the spinal cord ventral commissure are generated and organized. Morphogenesis pertains to the creation of form." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of cdef(FBbt:00005594, [OBO_REL:part_of=ZFA:0000075]) [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=cdef(FBbt:00005594, [OBO_REL:part_of=ZFA:0000075])])] [Term] id: GO:0021965 ! spinal cord ventral commissure morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of spinal_cord_larval_ventral_anastomosis ! seconds spent parsing GO:0021965: 25.2 ! parse: GO:0021976 using "medulla reticulospinal tract morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(reticulospinal tract, anatomy), OBO_REL:unfolds_in=FBbt:00003748]) [-22] ! no existing xp def ! def: "Generation of a long process of a CNS neuron, that carries efferent (outgoing) action potentials from the cell body in the medulla towards target cells in the spinal cord." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of anon(reticulospinal tract, anatomy) and OBO_REL:unfolds_in medulla [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(reticulospinal tract, anatomy), OBO_REL:unfolds_in=FBbt:00003748])] [Term] id: GO:0021976 ! medulla reticulospinal tract morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of anatomy:reticulospinal_tract intersection_of: OBO_REL:unfolds_in FBbt:00003748 ! medulla synonym: "m reticulospinal tract anatomical structure morphogenesis" EXACT [OBOL:automatic] synonym: "m reticulospinal tract morphogenesis" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021976: 8.79 ! parse: GO:0021978 using "telencephalon regionalization" => cdef(GO:0003002, [OBO_REL:results_in_developmental_progression_of=MA:0000183]) [-2] ! parse: GO:0021978 using "telencephalon regionalization" => cdef(GO:0003002, [OBO_REL:results_in_developmental_progression_of=ZFA:0000079]) [-2] ! parse: GO:0021978 using "telencephalon regionalization" => cdef(GO:0003002, [OBO_REL:results_in_patterning_for=MA:0000183]) [-2] ! parse: GO:0021978 using "telencephalon regionalization" => cdef(GO:0003002, [OBO_REL:results_in_patterning_for=ZFA:0000079]) [-2] ! parse: GO:0021978 using "telencephalon regionalization" => cdef(GO:0003002, [OBO_REL:unfolds_in=MA:0000183]) [-2] ! parse: GO:0021978 using "telencephalon regionalization" => cdef(GO:0003002, [OBO_REL:unfolds_in=ZFA:0000079]) [-2] ! no existing xp def ! def: "The regionalization process that creates areas within the forebrain that will direct the behavior of cell migration in differentiation as the telencephalon develops." ! PROPOSED: regionalization that OBO_REL:unfolds_in telencephalon [cdef(GO:0003002, [OBO_REL:unfolds_in=ZFA:0000079])] [Term] id: GO:0021978 ! telencephalon regionalization intersection_of: GO:0003002 ! regionalization intersection_of: OBO_REL:unfolds_in ZFA:0000079 ! telencephalon ! seconds spent parsing GO:0021978: 6.22 ! parse: GO:0021979 using "hypothalamus cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000000, OBO_REL:unfolds_in=MA:0000173]) [-3] ! parse: GO:0021979 using "hypothalamus cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000000, OBO_REL:unfolds_in=ZFA:0000032]) [-3] ! parse: GO:0021979 using "hypothalamus cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(hypothalamus, cell)]) [-13] ! parse: GO:0021979 using "hypothalamus cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(hypothalamus cell, cell)]) [-18] ! no existing xp def ! def: "The differentiation of cells that will contribute to the structure and function of the hypothalamus." ! PROPOSED: cell differentiation that OBO_REL:results_in_acquisition_of_features_of cell and OBO_REL:unfolds_in hypothalamus [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000000, OBO_REL:unfolds_in=ZFA:0000032])] [Term] id: GO:0021979 ! hypothalamus cell differentiation intersection_of: GO:0030154 ! cell differentiation intersection_of: OBO_REL:results_in_acquisition_of_features_of CL:0000000 ! cell intersection_of: OBO_REL:unfolds_in ZFA:0000032 ! hypothalamus ! seconds spent parsing GO:0021979: 11.43 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0021982 using "epiphysis development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00002650]) [-2] ! parse: GO:0021982 using "epiphysis development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000019]) [-2] ! parse: GO:0021982 using "pineal gland development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000175]) [-2] ! parse: GO:0021982 using "pineal gland development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000019]) [-2] ! no existing xp def ! def: "The progression of the pineal gland over time from its initial formation until its mature state. The pineal gland is an endocrine gland that secretes melatonin and is involved in circadian rhythms." ! PROPOSED: developmental process that results_in_complete_developmental_of epiphysis [cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000019])] [Term] id: GO:0021982 ! pineal gland development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of ZFA:0000019 ! epiphysis ! seconds spent parsing GO:0021982: 10.75 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0021983 using "hypophysis development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00002719]) [-2] ! parse: GO:0021983 using "hypophysis development" => cdef(GO:0032502, [results_in_complete_developmental_of=PO:0020109]) [-2] ! parse: GO:0021983 using "hypophysis development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000118]) [-2] ! parse: GO:0021983 using "pituitary gland development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000176]) [-2] ! parse: GO:0021983 using "pituitary gland development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(gland, anatomy), OBO_REL:unfolds_in=ZFA:0000118]) [-7] ! parse: GO:0021983 using "pituitary gland development" => cdef(GO:0048732, [OBO_REL:results_in_developmental_progression_of=ZFA:0000118]) [-2] ! no existing xp def ! def: "The progression of the pituitary gland over time from its initial formation until its mature state. The pituitary gland is an endocrine gland that secretes hormones that regulate many other glands." ! PROPOSED: gland development that OBO_REL:results_in_developmental_progression_of hypophysis [cdef(GO:0048732, [OBO_REL:results_in_developmental_progression_of=ZFA:0000118])] [Term] id: GO:0021983 ! pituitary gland development intersection_of: GO:0048732 ! gland development intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0000118 ! hypophysis ! seconds spent parsing GO:0021983: 15.92 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0021984 using "adenohypophysis development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000177]) [-2] ! parse: GO:0021984 using "adenohypophysis development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0001282]) [-2] ! parse: GO:0021984 using "adenophysis development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(adenophysis, anatomy)]) [-12] ! parse: GO:0021984 using "anterior pituitary development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0001282]) [-2] ! parse: GO:0021984 using "anterior pituitary gland development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(gland, anatomy), OBO_REL:unfolds_in=ZFA:0001282]) [-7] ! parse: GO:0021984 using "anterior pituitary gland development" => cdef(GO:0048732, [OBO_REL:results_in_developmental_progression_of=ZFA:0001282]) [-2] ! no existing xp def ! def: "The progression of the adenohypophysis over time from its initial formation until its mature state. The adenohypophysis is the anterior part of the pituitary. It secretes a variety of hormones and its function is regulated by the hypothalamus." ! PROPOSED: gland development that OBO_REL:results_in_developmental_progression_of adenohypophysis [cdef(GO:0048732, [OBO_REL:results_in_developmental_progression_of=ZFA:0001282])] [Term] id: GO:0021984 ! adenohypophysis development intersection_of: GO:0048732 ! gland development intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0001282 ! adenohypophysis ! seconds spent parsing GO:0021984: 19.99 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0021985 using "neurohypophysis development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000178]) [-2] ! parse: GO:0021985 using "neurohypophysis development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0001271]) [-2] ! parse: GO:0021985 using "neurophysis development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(neurophysis, anatomy)]) [-12] ! parse: GO:0021985 using "posterior pituitary development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0001271]) [-2] ! parse: GO:0021985 using "posterior pituitary gland development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(gland, anatomy), OBO_REL:unfolds_in=ZFA:0001271]) [-7] ! parse: GO:0021985 using "posterior pituitary gland development" => cdef(GO:0048732, [OBO_REL:results_in_developmental_progression_of=ZFA:0001271]) [-2] ! no existing xp def ! def: "The progression of the neurohypophysis over time from its initial formation until its mature state. The neurohypophysis is the part of the pituitary gland that secretes hormones involved in blood pressure regulation." ! PROPOSED: gland development that OBO_REL:results_in_developmental_progression_of neurohypophysis [cdef(GO:0048732, [OBO_REL:results_in_developmental_progression_of=ZFA:0001271])] [Term] id: GO:0021985 ! neurohypophysis development intersection_of: GO:0048732 ! gland development intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0001271 ! neurohypophysis ! seconds spent parsing GO:0021985: 20.02 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0021986 using "habenula development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000830]) [-2] ! parse: GO:0021986 using "habenula development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000213]) [-2] ! no existing xp def ! def: "The progression of the habenula over time from its initial formation until its mature state. The habenula is the group of nuclei that makes up the stalk of the pineal gland." ! PROPOSED: developmental process that results_in_complete_developmental_of habenula [cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000213])] [Term] id: GO:0021986 ! habenula development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of ZFA:0000213 ! habenula synonym: "habenulae development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021986: 5.36 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0021987 using "cerebral cortex development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00003625]) [-2] ! parse: GO:0021987 using "cerebral cortex development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000185]) [-2] ! parse: GO:0021987 using "cerebral cortex development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0002754]) [-2] ! no existing xp def ! def: "The progression of the cerebral cortex over time from its initial formation until its mature state. The cerebral cortex is the outer layered region of the telencephalon." ! PROPOSED: developmental process that results_in_complete_developmental_of neocortex [cdef(GO:0032502, [results_in_complete_developmental_of=MA:0002754])] [Term] id: GO:0021987 ! cerebral cortex development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of MA:0002754 ! neocortex synonym: "neocortex development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021987: 6.05 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0021988 using "olfactory lobe development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000193]) [-2] ! parse: GO:0021988 using "olfactory lobe development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0002413]) [-2] ! no existing xp def ! def: "The progression of the olfactory lobe over time from its initial formation until its mature state. The olfactory lobe is the area of the brain that process the neural inputs for the sense of smell." ! PROPOSED: developmental process that results_in_complete_developmental_of olfactory lobe [cdef(GO:0032502, [results_in_complete_developmental_of=MA:0002413])] [Term] id: GO:0021988 ! olfactory lobe development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of MA:0002413 ! olfactory lobe ! seconds spent parsing GO:0021988: 5.36 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0021989 using "olfactory cortex development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000193]) [-2] ! no existing xp def ! def: "The progression of the olfactory cortex over time from its initial formation until its mature state. The olfactory cortex is involved in the perception of smell. It receives input from the olfactory bulb and is responsible for the identification of odors." ! PROPOSED: developmental process that results_in_complete_developmental_of olfactory cortex [cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000193])] [Term] id: GO:0021989 ! olfactory cortex development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of MA:0000193 ! olfactory cortex synonym: "olfactory lobe development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021989: 4.74 ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0021990 using "neural plate formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=ZFA:0000132]) [-2] ! parse: GO:0021990 using "neural plate formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0000132]) [-2] ! no existing xp def ! def: "The formation of the flat, thickened layer of ectodermal cells known as the neural plate. The underlying dorsal mesoderm signals the ectodermal cells above it to elongate into columnar neural plate cells. The neural plate subsequently develops into the neural tube, which gives rise to the central nervous system." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of neural plate [cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0000132])] [Term] id: GO:0021990 ! neural plate formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of ZFA:0000132 ! neural plate synonym: "presumptive central nervous system anatomical structure formation" EXACT [OBOL:automatic] synonym: "presumptive central nervous system formation" EXACT [OBOL:automatic] synonym: "presumptive central nervous system formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021990: 5.22 ! No parse for: GO:0021991 neural plate thickening ! Already have xp for: GO:0021992 cell proliferation involved in neural plate elongation ! CURRENT : cell proliferation that OBO_REL:part_of neural plate elongation [cdef(GO:0008283, [OBO_REL:part_of=GO:0014022])] ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0021996 using "lamina terminalis formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(terminalis, anatomy), OBO_REL:unfolds_in=FBbt:00003708]) [-12] ! no existing xp def ! def: "The process whereby the anterior-most portion of the neural axis is formed by closure of the anterior neuropore." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of anon(terminalis, anatomy) and OBO_REL:unfolds_in lamina [cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(terminalis, anatomy), OBO_REL:unfolds_in=FBbt:00003708])] [Term] id: GO:0021996 ! lamina terminalis formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of anatomy:terminalis intersection_of: OBO_REL:unfolds_in FBbt:00003708 ! lamina synonym: "La terminalis anatomical structure formation" EXACT [OBOL:automatic] synonym: "La terminalis formation" EXACT [OBOL:automatic] synonym: "La terminalis formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021996: 8.65 ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0021997 using "neural plate pattern formation" => cdef(GO:0007389, [OBO_REL:results_in_developmental_progression_of=ZFA:0000132]) [-2] ! parse: GO:0021997 using "neural plate pattern formation" => cdef(GO:0007389, [OBO_REL:results_in_patterning_for=ZFA:0000132]) [-2] ! parse: GO:0021997 using "neural plate pattern formation" => cdef(GO:0007389, [OBO_REL:unfolds_in=ZFA:0000132]) [-2] ! parse: GO:0021997 using "neural plate pattern formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(pattern, anatomy), OBO_REL:unfolds_in=ZFA:0000132]) [-9] ! no existing xp def ! def: "The pattern specification process whereby the axes of the nervous system are established." ! PROPOSED: pattern specification process that OBO_REL:unfolds_in neural plate [cdef(GO:0007389, [OBO_REL:unfolds_in=ZFA:0000132])] [Term] id: GO:0021997 ! neural plate pattern formation intersection_of: GO:0007389 ! pattern specification process intersection_of: OBO_REL:unfolds_in ZFA:0000132 ! neural plate synonym: "pattern biosynthesis in presumptive central nervous system" EXACT [OBOL:automatic] synonym: "pattern biosynthesis in the presumptive central nervous system" EXACT [OBOL:automatic] synonym: "pattern biosynthesis through the presumptive central nervous system" EXACT [OBOL:automatic] synonym: "pattern specification process in presumptive central nervous system" EXACT [OBOL:automatic] synonym: "pattern specification process in the presumptive central nervous system" EXACT [OBOL:automatic] synonym: "pattern specification process through the presumptive central nervous system" EXACT [OBOL:automatic] synonym: "presumptive central nervous system pattern biosynthesis" EXACT [OBOL:automatic] synonym: "presumptive central nervous system pattern formation" EXACT [OBOL:automatic] synonym: "presumptive central nervous system pattern specification process" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021997: 5.34 ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0021998 using "neural plate mediolateral pattern formation" => cdef(GO:0007389, [OBO_REL:results_in_developmental_progression_of=anon(mediolateral, anatomy), OBO_REL:unfolds_in=ZFA:0000132]) [-14] ! parse: GO:0021998 using "neural plate mediolateral pattern formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(mediolateral pattern, anatomy), OBO_REL:unfolds_in=ZFA:0000132]) [-22] ! no existing xp def ! def: "The process that regulates the coordinated growth and differentiation that establishes the non-random mediolateral spatial arrangement of the neural plate." ! PROPOSED: pattern specification process that OBO_REL:results_in_developmental_progression_of anon(mediolateral, anatomy) and OBO_REL:unfolds_in neural plate [cdef(GO:0007389, [OBO_REL:results_in_developmental_progression_of=anon(mediolateral, anatomy), OBO_REL:unfolds_in=ZFA:0000132])] [Term] id: GO:0021998 ! neural plate mediolateral pattern formation intersection_of: GO:0007389 ! pattern specification process intersection_of: OBO_REL:results_in_developmental_progression_of anatomy:mediolateral intersection_of: OBO_REL:unfolds_in ZFA:0000132 ! neural plate synonym: "presumptive central nervous system mediolateral pattern biosynthesis" EXACT [OBOL:automatic] synonym: "presumptive central nervous system mediolateral pattern formation" EXACT [OBOL:automatic] synonym: "presumptive central nervous system mediolateral pattern specification process" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021998: 8.96 ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0021999 using "neural plate anterioposterior pattern formation" => cdef(GO:0007389, [OBO_REL:results_in_developmental_progression_of=anon(anterioposterior, anatomy), OBO_REL:unfolds_in=ZFA:0000132]) [-18] ! parse: GO:0021999 using "neural plate anterioposterior pattern formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(anterioposterior pattern, anatomy), OBO_REL:unfolds_in=ZFA:0000132]) [-26] ! no existing xp def ! def: "The process that regulates the coordinated growth and differentiation that establishes the non-random anterior-posterior spatial arrangement of the neural plate." ! PROPOSED: pattern specification process that OBO_REL:results_in_developmental_progression_of anon(anterioposterior, anatomy) and OBO_REL:unfolds_in neural plate [cdef(GO:0007389, [OBO_REL:results_in_developmental_progression_of=anon(anterioposterior, anatomy), OBO_REL:unfolds_in=ZFA:0000132])] [Term] id: GO:0021999 ! neural plate anterioposterior pattern formation intersection_of: GO:0007389 ! pattern specification process intersection_of: OBO_REL:results_in_developmental_progression_of anatomy:anterioposterior intersection_of: OBO_REL:unfolds_in ZFA:0000132 ! neural plate synonym: "presumptive central nervous system anterioposterior pattern biosynthesis" EXACT [OBOL:automatic] synonym: "presumptive central nervous system anterioposterior pattern formation" EXACT [OBOL:automatic] synonym: "presumptive central nervous system anterioposterior pattern specification process" EXACT [OBOL:automatic] ! seconds spent parsing GO:0021999: 8.92 ! No parse for: GO:0022000 forebrain induction by the anterior neural ridge ! Already have xp for: GO:0022004 midbrain-hindbrain boundary maturation during brain development ! CURRENT : midbrain-hindbrain boundary maturation that OBO_REL:part_of brain development [cdef(GO:0021732, [OBO_REL:part_of=GO:0007420])] ! Already have xp for: GO:0022005 midbrain-hindbrain boundary maturation during neural plate development ! CURRENT : midbrain-hindbrain boundary maturation that OBO_REL:part_of neural plate development [cdef(GO:0021732, [OBO_REL:part_of=GO:0001840])] ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0022006 using "zli biosynthesis" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=ZFA:0001344]) [-2] ! parse: GO:0022006 using "zli formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=ZFA:0001344]) [-2] ! parse: GO:0022006 using "zli formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0001344]) [-2] ! parse: GO:0022006 using "zona limitans intrathalamica formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=ZFA:0001344]) [-2] ! parse: GO:0022006 using "zona limitans intrathalamica formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0001344]) [-2] ! no existing xp def ! def: "The formation of the narrow stripe of cells that lies between the prospective dorsal and ventral thalami. This boundary contains signals that pattern the prethalamic and thalamic territories of the future mid-diencephalon." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of zona limitans intrathalamica [cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0001344])] [Term] id: GO:0022006 ! zona limitans intrathalamica formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of ZFA:0001344 ! zona limitans intrathalamica ! seconds spent parsing GO:0022006: 15.48 ! parse: GO:0022009 using "central nervous system vasculogenesis" => cdef(GO:0001570, [OBO_REL:results_in_acquisition_of_features_of=anon(central nervous system, cell)]) [-23] ! parse: GO:0022009 using "central nervous system vasculogenesis" => cdef(GO:0001570, [OBO_REL:results_in_developmental_progression_of=FBbt:00005094]) [-2] ! parse: GO:0022009 using "central nervous system vasculogenesis" => cdef(GO:0001570, [OBO_REL:results_in_developmental_progression_of=MA:0000167]) [-2] ! parse: GO:0022009 using "central nervous system vasculogenesis" => cdef(GO:0001570, [OBO_REL:results_in_developmental_progression_of=ZFA:0000012]) [-2] ! no existing xp def ! def: "The differentiation of endothelial cells from progenitor cells during blood vessel development, and the de novo formation of blood vessels and tubes in the central nervous system. The capillary endothelial cells in the brain are specialized to form the blood-brain barrier." ! PROPOSED: vasculogenesis that OBO_REL:results_in_developmental_progression_of central nervous system [cdef(GO:0001570, [OBO_REL:results_in_developmental_progression_of=ZFA:0000012])] [Term] id: GO:0022009 ! central nervous system vasculogenesis intersection_of: GO:0001570 ! vasculogenesis intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0000012 ! central nervous system synonym: "cns vascular morphogenesis" EXACT [OBOL:automatic] synonym: "cns vasculogenesis" EXACT [OBOL:automatic] ! seconds spent parsing GO:0022009: 11.92 ! Already have xp for: GO:0022010 myelination in the central nervous system ! CURRENT : myelination that OBO_REL:unfolds_in central nervous system [cdef(GO:0042552, [OBO_REL:unfolds_in=continuant:central_nervous_system])] ! Already have xp for: GO:0022011 myelination in the peripheral nervous system ! CURRENT : myelination that OBO_REL:unfolds_in peripheral nervous system [cdef(GO:0042552, [OBO_REL:unfolds_in=continuant:peripheral_nervous_system])] ! Already have xp for: GO:0022014 radial glial cell division in the subpallium ! CURRENT : radial_glial_cell_cell_division that OBO_REL:unfolds_in subpallium [cdef(radial_glial_cell_cell_division, [OBO_REL:unfolds_in=cell:subpallium])] ! Already have xp for: GO:0022015 radial glial cell division in the pallium ! CURRENT : radial_glial_cell_cell_division that OBO_REL:unfolds_in pallium [cdef(radial_glial_cell_cell_division, [OBO_REL:unfolds_in=cell:pallium])] ! Already have xp for: GO:0022016 glioblast cell division in the pallium ! CURRENT : glioblast cell division that OBO_REL:unfolds_in pallium and OBO_REL:unfolds_in pallium [cdef(GO:0048860, [OBO_REL:unfolds_in=cell:pallium, OBO_REL:unfolds_in=continuant:pallium])] ! Already have xp for: GO:0022017 neuroblast division in the pallium ! CURRENT : neuroblast division that OBO_REL:unfolds_in pallium and OBO_REL:unfolds_in pallium [cdef(GO:0045034, [OBO_REL:unfolds_in=cell:pallium, OBO_REL:unfolds_in=continuant:pallium])] ! parse: GO:0022022 using "septum cell proliferation" => cdef(GO:0008283, [OBO_REL:increases_population_size_of=CL:0000000, OBO_REL:unfolds_in=PO:0000030]) [-3] ! parse: GO:0022022 using "septum cell proliferation" => cdef(ZFA:0000098, [OBO_REL:results_in_division_of=CL:0000000, OBO_REL:unfolds_in=PO:0000030]) [-3] ! no existing xp def ! def: "The multiplication or reproduction of septal cells, resulting in the rapid expansion of a cell population." ! PROPOSED: proliferative region that OBO_REL:results_in_division_of cell and OBO_REL:unfolds_in septum [cdef(ZFA:0000098, [OBO_REL:results_in_division_of=CL:0000000, OBO_REL:unfolds_in=PO:0000030])] [Term] id: GO:0022022 ! septal cell proliferation intersection_of: ZFA:0000098 ! proliferative region intersection_of: OBO_REL:results_in_division_of CL:0000000 ! cell intersection_of: OBO_REL:unfolds_in PO:0000030 ! septum ! seconds spent parsing GO:0022022: 13.48 ! Already have xp for: GO:0022023 radial glial cell fate commitment in the forebrain ! CURRENT : radial_glial_cell_cell_fate_commitment that OBO_REL:unfolds_in forebrain [cdef(radial_glial_cell_cell_fate_commitment, [OBO_REL:unfolds_in=cell:forebrain])] ! Already have xp for: GO:0022024 BMP signaling pathway involved in forebrain neuron fate commitment ! CURRENT : BMP signaling pathway that OBO_REL:part_of forebrain neuron fate commitment [cdef(GO:0030509, [OBO_REL:part_of=GO:0021877])] ! Already have xp for: GO:0022025 leukemia inhibitory factor signaling pathway involved in forebrain neuron fate commitment ! CURRENT : leukemia inhibitory factor signaling pathway that OBO_REL:part_of forebrain neuron fate commitment [cdef(GO:0048861, [OBO_REL:part_of=GO:0021877])] ! No parse for: GO:0022026 epidermal growth factor signaling pathway involved in forebrain neuron fate commitment ! parse: GO:0022029 using "telencephalon cell migration" => cdef(GO:0016477, [OBO_REL:results_in_movement_of=CL:0000000, OBO_REL:unfolds_in=MA:0000183]) [-3] ! parse: GO:0022029 using "telencephalon cell migration" => cdef(GO:0016477, [OBO_REL:results_in_movement_of=CL:0000000, OBO_REL:unfolds_in=ZFA:0000079]) [-3] ! no existing xp def ! def: "The orderly movement of cells from one site to another at least one of which is located in the telencephalon." ! PROPOSED: cell migration that OBO_REL:results_in_movement_of cell and OBO_REL:unfolds_in telencephalon [cdef(GO:0016477, [OBO_REL:results_in_movement_of=CL:0000000, OBO_REL:unfolds_in=ZFA:0000079])] [Term] id: GO:0022029 ! telencephalon cell migration intersection_of: GO:0016477 ! cell migration intersection_of: OBO_REL:results_in_movement_of CL:0000000 ! cell intersection_of: OBO_REL:unfolds_in ZFA:0000079 ! telencephalon ! seconds spent parsing GO:0022029: 11.35 ! parse: GO:0022030 using "telencephalon glial cell migration" => cdef(GO:0016477, [OBO_REL:results_in_movement_of=CL:0000125, OBO_REL:unfolds_in=MA:0000183]) [-3] ! parse: GO:0022030 using "telencephalon glial cell migration" => cdef(GO:0016477, [OBO_REL:results_in_movement_of=CL:0000125, OBO_REL:unfolds_in=ZFA:0000079]) [-3] ! no existing xp def ! def: "The orderly movement of glial cells through the telencephalon." ! PROPOSED: cell migration that OBO_REL:results_in_movement_of glial cell and OBO_REL:unfolds_in telencephalon [cdef(GO:0016477, [OBO_REL:results_in_movement_of=CL:0000125, OBO_REL:unfolds_in=ZFA:0000079])] [Term] id: GO:0022030 ! telencephalon glial cell migration intersection_of: GO:0016477 ! cell migration intersection_of: OBO_REL:results_in_movement_of CL:0000125 ! glial cell intersection_of: OBO_REL:unfolds_in ZFA:0000079 ! telencephalon ! seconds spent parsing GO:0022030: 17.74 ! parse: GO:0022031 using "telencephalon astrocyte cell migration" => cdef(GO:0016477, [OBO_REL:results_in_movement_of=CL:0000000, OBO_REL:unfolds_in=cdef(ZFA:0009075, [OBO_REL:part_of=MA:0000183])]) [-4] ! parse: GO:0022031 using "telencephalon astrocyte cell migration" => cdef(GO:0016477, [OBO_REL:results_in_movement_of=CL:0000000, OBO_REL:unfolds_in=cdef(ZFA:0009075, [OBO_REL:part_of=ZFA:0000079])]) [-4] ! parse: GO:0022031 using "telencephalon astrocyte cell migration" => cdef(GO:0016477, [OBO_REL:results_in_movement_of=CL:0000127, OBO_REL:unfolds_in=MA:0000183]) [-3] ! parse: GO:0022031 using "telencephalon astrocyte cell migration" => cdef(GO:0016477, [OBO_REL:results_in_movement_of=CL:0000127, OBO_REL:unfolds_in=ZFA:0000079]) [-3] ! parse: GO:0022031 using "telencephalon astrocyte cell migration" => cdef(GO:0016477, [and=results_in_movement_of(CL:0000000)/unfolds_in(CL:0000127), OBO_REL:unfolds_in=MA:0000183]) [-3] ! parse: GO:0022031 using "telencephalon astrocyte cell migration" => cdef(GO:0016477, [and=results_in_movement_of(CL:0000000)/unfolds_in(CL:0000127), OBO_REL:unfolds_in=ZFA:0000079]) [-3] ! parse: GO:0022031 using "telencephalon astrocyte cell migration" => cdef(GO:0016477, [and=results_in_movement_of(CL:0000000)/unfolds_in(ZFA:0009075), OBO_REL:unfolds_in=MA:0000183]) [-3] ! parse: GO:0022031 using "telencephalon astrocyte cell migration" => cdef(GO:0016477, [and=results_in_movement_of(CL:0000000)/unfolds_in(ZFA:0009075), OBO_REL:unfolds_in=ZFA:0000079]) [-3] ! no existing xp def ! def: "The orderly movement of astrocyte cells through the telencephalon." ! PROPOSED: cell migration that and results_in_movement_of(CL:0000000)/unfolds_in(ZFA:0009075) and OBO_REL:unfolds_in telencephalon [cdef(GO:0016477, [and=results_in_movement_of(CL:0000000)/unfolds_in(ZFA:0009075), OBO_REL:unfolds_in=ZFA:0000079])] [Term] id: GO:0022031 ! telencephalon astrocyte cell migration intersection_of: GO:0016477 ! cell migration intersection_of: and results_in_movement_of(CL:0000000)/unfolds_in(ZFA:0009075) intersection_of: OBO_REL:unfolds_in ZFA:0000079 ! telencephalon ! seconds spent parsing GO:0022031: 29.37 ! parse: GO:0022032 using "telencephalon oligodendrocyte cell migration" => cdef(GO:0016477, [OBO_REL:results_in_movement_of=CL:0000000, OBO_REL:unfolds_in=cdef(ZFA:0009076, [OBO_REL:part_of=MA:0000183])]) [-4] ! parse: GO:0022032 using "telencephalon oligodendrocyte cell migration" => cdef(GO:0016477, [OBO_REL:results_in_movement_of=CL:0000000, OBO_REL:unfolds_in=cdef(ZFA:0009076, [OBO_REL:part_of=ZFA:0000079])]) [-4] ! parse: GO:0022032 using "telencephalon oligodendrocyte cell migration" => cdef(GO:0016477, [OBO_REL:results_in_movement_of=CL:0000128, OBO_REL:unfolds_in=MA:0000183]) [-3] ! parse: GO:0022032 using "telencephalon oligodendrocyte cell migration" => cdef(GO:0016477, [OBO_REL:results_in_movement_of=CL:0000128, OBO_REL:unfolds_in=ZFA:0000079]) [-3] ! parse: GO:0022032 using "telencephalon oligodendrocyte cell migration" => cdef(GO:0016477, [and=results_in_movement_of(CL:0000000)/unfolds_in(CL:0000128), OBO_REL:unfolds_in=MA:0000183]) [-3] ! parse: GO:0022032 using "telencephalon oligodendrocyte cell migration" => cdef(GO:0016477, [and=results_in_movement_of(CL:0000000)/unfolds_in(CL:0000128), OBO_REL:unfolds_in=ZFA:0000079]) [-3] ! parse: GO:0022032 using "telencephalon oligodendrocyte cell migration" => cdef(GO:0016477, [and=results_in_movement_of(CL:0000000)/unfolds_in(ZFA:0009076), OBO_REL:unfolds_in=MA:0000183]) [-3] ! parse: GO:0022032 using "telencephalon oligodendrocyte cell migration" => cdef(GO:0016477, [and=results_in_movement_of(CL:0000000)/unfolds_in(ZFA:0009076), OBO_REL:unfolds_in=ZFA:0000079]) [-3] ! no existing xp def ! def: "The multiplication or reproduction of telencephalon oligodendrocyte cells, resulting in the rapid expansion of a cell population." ! PROPOSED: cell migration that and results_in_movement_of(CL:0000000)/unfolds_in(ZFA:0009076) and OBO_REL:unfolds_in telencephalon [cdef(GO:0016477, [and=results_in_movement_of(CL:0000000)/unfolds_in(ZFA:0009076), OBO_REL:unfolds_in=ZFA:0000079])] [Term] id: GO:0022032 ! telencephalon oligodendrocyte cell migration intersection_of: GO:0016477 ! cell migration intersection_of: and results_in_movement_of(CL:0000000)/unfolds_in(ZFA:0009076) intersection_of: OBO_REL:unfolds_in ZFA:0000079 ! telencephalon ! seconds spent parsing GO:0022032: 27.07 ! parse: GO:0022033 using "telencephalon microglial cell migration" => cdef(GO:0016477, [OBO_REL:results_in_movement_of=CL:0000129, OBO_REL:unfolds_in=MA:0000183]) [-3] ! parse: GO:0022033 using "telencephalon microglial cell migration" => cdef(GO:0016477, [OBO_REL:results_in_movement_of=CL:0000129, OBO_REL:unfolds_in=ZFA:0000079]) [-3] ! no existing xp def ! def: "The orderly movement of microglial cells through the telencephalon." ! PROPOSED: cell migration that OBO_REL:results_in_movement_of microglial cell and OBO_REL:unfolds_in telencephalon [cdef(GO:0016477, [OBO_REL:results_in_movement_of=CL:0000129, OBO_REL:unfolds_in=ZFA:0000079])] [Term] id: GO:0022033 ! telencephalon microglial cell migration intersection_of: GO:0016477 ! cell migration intersection_of: OBO_REL:results_in_movement_of CL:0000129 ! microglial cell intersection_of: OBO_REL:unfolds_in ZFA:0000079 ! telencephalon ! seconds spent parsing GO:0022033: 13.28 ! parse: GO:0022034 using "rhombomere cell proliferation" => cdef(GO:0008283, [OBO_REL:increases_population_size_of=CL:0000000, OBO_REL:unfolds_in=ZFA:0001064]) [-3] ! parse: GO:0022034 using "rhombomere cell proliferation" => cdef(ZFA:0000098, [OBO_REL:results_in_division_of=CL:0000000, OBO_REL:unfolds_in=ZFA:0001064]) [-3] ! no existing xp def ! def: "The multiplication or reproduction of rhombomere cells, resulting in the rapid expansion of the cell population." ! PROPOSED: proliferative region that OBO_REL:results_in_division_of cell and OBO_REL:unfolds_in rhombomere [cdef(ZFA:0000098, [OBO_REL:results_in_division_of=CL:0000000, OBO_REL:unfolds_in=ZFA:0001064])] [Term] id: GO:0022034 ! rhombomere cell proliferation intersection_of: ZFA:0000098 ! proliferative region intersection_of: OBO_REL:results_in_division_of CL:0000000 ! cell intersection_of: OBO_REL:unfolds_in ZFA:0001064 ! rhombomere synonym: "hindbrain segment cell cell cycle" EXACT [OBOL:automatic] synonym: "hindbrain segment cell cell division" EXACT [OBOL:automatic] synonym: "hindbrain segment cell division" EXACT [OBOL:automatic] synonym: "hindbrain segment cell proliferation" EXACT [OBOL:automatic] synonym: "hindbrain segment cell proliferative region" EXACT [OBOL:automatic] synonym: "neuromeres cell cell cycle" EXACT [OBOL:automatic] synonym: "neuromeres cell cell division" EXACT [OBOL:automatic] synonym: "neuromeres cell division" EXACT [OBOL:automatic] synonym: "neuromeres cell proliferation" EXACT [OBOL:automatic] synonym: "neuromeres cell proliferative region" EXACT [OBOL:automatic] synonym: "rhombomeres cell cell cycle" EXACT [OBOL:automatic] synonym: "rhombomeres cell cell division" EXACT [OBOL:automatic] synonym: "rhombomeres cell division" EXACT [OBOL:automatic] synonym: "rhombomeres cell proliferation" EXACT [OBOL:automatic] synonym: "rhombomeres cell proliferative region" EXACT [OBOL:automatic] ! seconds spent parsing GO:0022034: 8.62 ! parse: GO:0022035 using "rhombomere cell migration" => cdef(GO:0016477, [OBO_REL:results_in_movement_of=CL:0000000, OBO_REL:unfolds_in=ZFA:0001064]) [-3] ! no existing xp def ! def: "The movement of cells within a rhombomere. This process is known to occur as an early step in the generation of anatomical structure from a rhombomere." ! PROPOSED: cell migration that OBO_REL:results_in_movement_of cell and OBO_REL:unfolds_in rhombomere [cdef(GO:0016477, [OBO_REL:results_in_movement_of=CL:0000000, OBO_REL:unfolds_in=ZFA:0001064])] [Term] id: GO:0022035 ! rhombomere cell migration intersection_of: GO:0016477 ! cell migration intersection_of: OBO_REL:results_in_movement_of CL:0000000 ! cell intersection_of: OBO_REL:unfolds_in ZFA:0001064 ! rhombomere synonym: "hindbrain segment cell cell migration" EXACT [OBOL:automatic] synonym: "hindbrain segment cell migration" EXACT [OBOL:automatic] synonym: "neuromeres cell cell migration" EXACT [OBOL:automatic] synonym: "neuromeres cell migration" EXACT [OBOL:automatic] synonym: "rhombomeres cell cell migration" EXACT [OBOL:automatic] synonym: "rhombomeres cell migration" EXACT [OBOL:automatic] ! seconds spent parsing GO:0022035: 7.8 ! parse: GO:0022036 using "rhombomere cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000000, OBO_REL:unfolds_in=ZFA:0001064]) [-3] ! parse: GO:0022036 using "rhombomere cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(rhombomere, cell)]) [-11] ! parse: GO:0022036 using "rhombomere cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(rhombomere cell, cell)]) [-16] ! no existing xp def ! def: "The process whereby a relatively unspecialized cell acquires specialized features of a rhombomere cell." ! PROPOSED: cell differentiation that OBO_REL:results_in_acquisition_of_features_of cell and OBO_REL:unfolds_in rhombomere [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000000, OBO_REL:unfolds_in=ZFA:0001064])] [Term] id: GO:0022036 ! rhombomere cell differentiation intersection_of: GO:0030154 ! cell differentiation intersection_of: OBO_REL:results_in_acquisition_of_features_of CL:0000000 ! cell intersection_of: OBO_REL:unfolds_in ZFA:0001064 ! rhombomere synonym: "hindbrain segment cell cell differentiation" EXACT [OBOL:automatic] synonym: "hindbrain segment cell differentiation" EXACT [OBOL:automatic] synonym: "neuromeres cell cell differentiation" EXACT [OBOL:automatic] synonym: "neuromeres cell differentiation" EXACT [OBOL:automatic] synonym: "rhombomeres cell cell differentiation" EXACT [OBOL:automatic] synonym: "rhombomeres cell differentiation" EXACT [OBOL:automatic] ! seconds spent parsing GO:0022036: 7.86 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0022037 using "metencephalon development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000197]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the metencephalon over time, from its formation to the mature structure." ! PROPOSED: developmental process that results_in_complete_developmental_of metencephalon [cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000197])] [Term] id: GO:0022037 ! metencephalon development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of MA:0000197 ! metencephalon ! seconds spent parsing GO:0022037: 4.69 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0022038 using "corpus callosum development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000188]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the corpus callosum over time, from its formation to the mature structure. The corpus callosum is a thick bundle of nerve fibers comprising a commissural plate connecting the two cerebral hemispheres. It consists of contralateral axon projections that provide communication between the right and left cerebral hemispheres." ! PROPOSED: developmental process that results_in_complete_developmental_of corpus callosum [cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000188])] [Term] id: GO:0022038 ! corpus callosum development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of MA:0000188 ! corpus callosum ! seconds spent parsing GO:0022038: 4.71 ! No parse for: GO:0022402 cell cycle process ! No parse for: GO:0022403 cell cycle phase ! No parse for: GO:0022405 hair cycle process ! No parse for: GO:0022406 membrane docking ! No parse for: GO:0022411 cellular component disassembly ! No relation defined: results_in_complete_developmental_of ! parse: GO:0022416 using "bristle development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00005179]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the bristle over time, from its formation to the mature structure. A bristle is an insect sensory organ." ! PROPOSED: developmental process that results_in_complete_developmental_of macrochaeta [cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00005179])] [Term] id: GO:0022416 ! bristle development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of FBbt:00005179 ! macrochaeta synonym: "macrochaeta development" EXACT [OBOL:automatic] synonym: "setae development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0022416: 4.69 ! No parse for: GO:0022607 cellular component assembly ! No parse for: GO:0022608 multicellular organism adhesion ! No parse for: GO:0022609 multicellular organism adhesion to substrate ! parse: GO:0022612 using "gland morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(gland, anatomy)]) [-6] ! no existing xp def ! def: "The process by which the anatomical structures of a gland are generated and organized. Morphogenesis pertains to the creation of form." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of anon(gland, anatomy) [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(gland, anatomy)])] [Term] id: GO:0022612 ! gland morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of anatomy:gland synonym: "gland anatomical structure morphogenesis" EXACT [OBOL:automatic] ! seconds spent parsing GO:0022612: 4.19 ! parse: GO:0022613 using "ribonucleoprotein complex biogenesis and assembly" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0030529]) [-2] ! no existing xp def ! def: "The cellular process by which a complex containing RNA and proteins, is synthesized, aggregates, and bonds together." ! PROPOSED: cellular component assembly that OBO_REL:results_in_creation_of ribonucleoprotein complex [cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0030529])] [Term] id: GO:0022613 ! ribonucleoprotein complex biogenesis and assembly intersection_of: GO:0022607 ! cellular component assembly intersection_of: OBO_REL:results_in_creation_of GO:0030529 ! ribonucleoprotein complex synonym: "RNA-protein complex assembly" EXACT [OBOL:automatic] synonym: "RNA-protein complex assembly and maintenance" EXACT [OBOL:automatic] synonym: "RNA-protein complex biogenesis" EXACT [OBOL:automatic] synonym: "RNA-protein complex biogenesis and assembly" EXACT [OBOL:automatic] synonym: "RNA-protein complex cell structure assembly" EXACT [OBOL:automatic] synonym: "RNA-protein complex cellular component assembly" EXACT [OBOL:automatic] synonym: "RNA-protein complex complex assembly" EXACT [OBOL:automatic] synonym: "RNA-protein complex formation" EXACT [OBOL:automatic] synonym: "RNP assembly" EXACT [OBOL:automatic] synonym: "RNP assembly and maintenance" EXACT [OBOL:automatic] synonym: "RNP biogenesis" EXACT [OBOL:automatic] synonym: "RNP biogenesis and assembly" EXACT [OBOL:automatic] synonym: "RNP cell structure assembly" EXACT [OBOL:automatic] synonym: "RNP cellular component assembly" EXACT [OBOL:automatic] synonym: "RNP complex assembly" EXACT [OBOL:automatic] synonym: "RNP formation" EXACT [OBOL:automatic] synonym: "assembly and maintenance of RNA-protein complex" EXACT [OBOL:automatic] synonym: "assembly and maintenance of RNP" EXACT [OBOL:automatic] synonym: "assembly and maintenance of protein-RNA complex" EXACT [OBOL:automatic] synonym: "assembly and maintenance of ribonucleoprotein" EXACT [OBOL:automatic] synonym: "assembly and maintenance of ribonucleoprotein complex" EXACT [OBOL:automatic] synonym: "assembly of RNA-protein complex" EXACT [OBOL:automatic] synonym: "assembly of RNP" EXACT [OBOL:automatic] synonym: "assembly of protein-RNA complex" EXACT [OBOL:automatic] synonym: "assembly of ribonucleoprotein" EXACT [OBOL:automatic] synonym: "assembly of ribonucleoprotein complex" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of RNA-protein complex" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of RNP" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of protein-RNA complex" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of ribonucleoprotein" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of ribonucleoprotein complex" EXACT [OBOL:automatic] synonym: "biogenesis of RNA-protein complex" EXACT [OBOL:automatic] synonym: "biogenesis of RNP" EXACT [OBOL:automatic] synonym: "biogenesis of protein-RNA complex" EXACT [OBOL:automatic] synonym: "biogenesis of ribonucleoprotein" EXACT [OBOL:automatic] synonym: "biogenesis of ribonucleoprotein complex" EXACT [OBOL:automatic] synonym: "cell structure assembly of RNA-protein complex" EXACT [OBOL:automatic] synonym: "cell structure assembly of RNP" EXACT [OBOL:automatic] synonym: "cell structure assembly of protein-RNA complex" EXACT [OBOL:automatic] synonym: "cell structure assembly of ribonucleoprotein" EXACT [OBOL:automatic] synonym: "cell structure assembly of ribonucleoprotein complex" EXACT [OBOL:automatic] synonym: "cellular component assembly of RNA-protein complex" EXACT [OBOL:automatic] synonym: "cellular component assembly of RNP" EXACT [OBOL:automatic] synonym: "cellular component assembly of protein-RNA complex" EXACT [OBOL:automatic] synonym: "cellular component assembly of ribonucleoprotein" EXACT [OBOL:automatic] synonym: "cellular component assembly of ribonucleoprotein complex" EXACT [OBOL:automatic] synonym: "complex assembly of RNA-protein complex" EXACT [OBOL:automatic] synonym: "complex assembly of RNP" EXACT [OBOL:automatic] synonym: "complex assembly of protein-RNA complex" EXACT [OBOL:automatic] synonym: "complex assembly of ribonucleoprotein" EXACT [OBOL:automatic] synonym: "complex assembly of ribonucleoprotein complex" EXACT [OBOL:automatic] synonym: "formation of RNA-protein complex" EXACT [OBOL:automatic] synonym: "formation of RNP" EXACT [OBOL:automatic] synonym: "formation of protein-RNA complex" EXACT [OBOL:automatic] synonym: "formation of ribonucleoprotein" EXACT [OBOL:automatic] synonym: "formation of ribonucleoprotein complex" EXACT [OBOL:automatic] synonym: "protein-RNA complex assembly" EXACT [OBOL:automatic] synonym: "protein-RNA complex assembly and maintenance" EXACT [OBOL:automatic] synonym: "protein-RNA complex biogenesis" EXACT [OBOL:automatic] synonym: "protein-RNA complex biogenesis and assembly" EXACT [OBOL:automatic] synonym: "protein-RNA complex cell structure assembly" EXACT [OBOL:automatic] synonym: "protein-RNA complex cellular component assembly" EXACT [OBOL:automatic] synonym: "protein-RNA complex complex assembly" EXACT [OBOL:automatic] synonym: "protein-RNA complex formation" EXACT [OBOL:automatic] synonym: "ribonucleoprotein assembly" EXACT [OBOL:automatic] synonym: "ribonucleoprotein assembly and maintenance" EXACT [OBOL:automatic] synonym: "ribonucleoprotein biogenesis" EXACT [OBOL:automatic] synonym: "ribonucleoprotein biogenesis and assembly" EXACT [OBOL:automatic] synonym: "ribonucleoprotein cell structure assembly" EXACT [OBOL:automatic] synonym: "ribonucleoprotein cellular component assembly" EXACT [OBOL:automatic] synonym: "ribonucleoprotein complex assembly" EXACT [OBOL:automatic] synonym: "ribonucleoprotein complex assembly and maintenance" EXACT [OBOL:automatic] synonym: "ribonucleoprotein complex biogenesis" EXACT [OBOL:automatic] synonym: "ribonucleoprotein complex cell structure assembly" EXACT [OBOL:automatic] synonym: "ribonucleoprotein complex cellular component assembly" EXACT [OBOL:automatic] synonym: "ribonucleoprotein complex complex assembly" EXACT [OBOL:automatic] synonym: "ribonucleoprotein complex formation" EXACT [OBOL:automatic] synonym: "ribonucleoprotein formation" EXACT [OBOL:automatic] def: "The aggregation and bonding together of a set of macromolecules to form a RNA-protein complex" [OBOL:automatic] ! seconds spent parsing GO:0022613: 14.98 ! No parse for: GO:0022614 membrane to membrane docking ! parse: GO:0022617 using "extracellular matrix disassembly" => cdef(GO:0022411, [OBO_REL:results_in_breakdown_of=GO:0031012]) [-2] ! no existing xp def ! def: "A process that results in the breakdown of the extracellular matrix." ! PROPOSED: cellular component disassembly that OBO_REL:results_in_breakdown_of extracellular matrix [cdef(GO:0022411, [OBO_REL:results_in_breakdown_of=GO:0031012])] [Term] id: GO:0022617 ! extracellular matrix disassembly intersection_of: GO:0022411 ! cellular component disassembly intersection_of: OBO_REL:results_in_breakdown_of GO:0031012 ! extracellular matrix synonym: "cell structure disassembly of extracellular matrix" EXACT [OBOL:automatic] synonym: "cellular component disassembly of extracellular matrix" EXACT [OBOL:automatic] synonym: "disassembly of extracellular matrix" EXACT [OBOL:automatic] synonym: "extracellular matrix cell structure disassembly" EXACT [OBOL:automatic] synonym: "extracellular matrix cellular component disassembly" EXACT [OBOL:automatic] ! seconds spent parsing GO:0022617: 10.87 ! parse: GO:0022618 using "RNA-protein complex assembly" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0030529]) [-2] ! parse: GO:0022618 using "RNP complex assembly" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0030529]) [-2] ! parse: GO:0022618 using "protein-RNA complex assembly" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0030529]) [-2] ! parse: GO:0022618 using "ribonucleoprotein complex assembly" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0030529]) [-2] ! no existing xp def ! def: "The aggregation and bonding together of proteins and RNA molecules to form a ribonucleoprotein complex." ! PROPOSED: cellular component assembly that OBO_REL:results_in_creation_of ribonucleoprotein complex [cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0030529])] [Term] id: GO:0022618 ! protein-RNA complex assembly intersection_of: GO:0022607 ! cellular component assembly intersection_of: OBO_REL:results_in_creation_of GO:0030529 ! ribonucleoprotein complex synonym: "RNA-protein complex assembly and maintenance" EXACT [OBOL:automatic] synonym: "RNA-protein complex biogenesis" EXACT [OBOL:automatic] synonym: "RNA-protein complex biogenesis and assembly" EXACT [OBOL:automatic] synonym: "RNA-protein complex cell structure assembly" EXACT [OBOL:automatic] synonym: "RNA-protein complex cellular component assembly" EXACT [OBOL:automatic] synonym: "RNA-protein complex complex assembly" EXACT [OBOL:automatic] synonym: "RNA-protein complex formation" EXACT [OBOL:automatic] synonym: "RNP assembly" EXACT [OBOL:automatic] synonym: "RNP assembly and maintenance" EXACT [OBOL:automatic] synonym: "RNP biogenesis" EXACT [OBOL:automatic] synonym: "RNP biogenesis and assembly" EXACT [OBOL:automatic] synonym: "RNP cell structure assembly" EXACT [OBOL:automatic] synonym: "RNP cellular component assembly" EXACT [OBOL:automatic] synonym: "RNP formation" EXACT [OBOL:automatic] synonym: "assembly and maintenance of RNA-protein complex" EXACT [OBOL:automatic] synonym: "assembly and maintenance of RNP" EXACT [OBOL:automatic] synonym: "assembly and maintenance of protein-RNA complex" EXACT [OBOL:automatic] synonym: "assembly and maintenance of ribonucleoprotein" EXACT [OBOL:automatic] synonym: "assembly and maintenance of ribonucleoprotein complex" EXACT [OBOL:automatic] synonym: "assembly of RNA-protein complex" EXACT [OBOL:automatic] synonym: "assembly of RNP" EXACT [OBOL:automatic] synonym: "assembly of protein-RNA complex" EXACT [OBOL:automatic] synonym: "assembly of ribonucleoprotein" EXACT [OBOL:automatic] synonym: "assembly of ribonucleoprotein complex" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of RNA-protein complex" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of RNP" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of protein-RNA complex" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of ribonucleoprotein" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of ribonucleoprotein complex" EXACT [OBOL:automatic] synonym: "biogenesis of RNA-protein complex" EXACT [OBOL:automatic] synonym: "biogenesis of RNP" EXACT [OBOL:automatic] synonym: "biogenesis of protein-RNA complex" EXACT [OBOL:automatic] synonym: "biogenesis of ribonucleoprotein" EXACT [OBOL:automatic] synonym: "biogenesis of ribonucleoprotein complex" EXACT [OBOL:automatic] synonym: "cell structure assembly of RNA-protein complex" EXACT [OBOL:automatic] synonym: "cell structure assembly of RNP" EXACT [OBOL:automatic] synonym: "cell structure assembly of protein-RNA complex" EXACT [OBOL:automatic] synonym: "cell structure assembly of ribonucleoprotein" EXACT [OBOL:automatic] synonym: "cell structure assembly of ribonucleoprotein complex" EXACT [OBOL:automatic] synonym: "cellular component assembly of RNA-protein complex" EXACT [OBOL:automatic] synonym: "cellular component assembly of RNP" EXACT [OBOL:automatic] synonym: "cellular component assembly of protein-RNA complex" EXACT [OBOL:automatic] synonym: "cellular component assembly of ribonucleoprotein" EXACT [OBOL:automatic] synonym: "cellular component assembly of ribonucleoprotein complex" EXACT [OBOL:automatic] synonym: "complex assembly of RNA-protein complex" EXACT [OBOL:automatic] synonym: "complex assembly of RNP" EXACT [OBOL:automatic] synonym: "complex assembly of protein-RNA complex" EXACT [OBOL:automatic] synonym: "complex assembly of ribonucleoprotein" EXACT [OBOL:automatic] synonym: "complex assembly of ribonucleoprotein complex" EXACT [OBOL:automatic] synonym: "formation of RNA-protein complex" EXACT [OBOL:automatic] synonym: "formation of RNP" EXACT [OBOL:automatic] synonym: "formation of protein-RNA complex" EXACT [OBOL:automatic] synonym: "formation of ribonucleoprotein" EXACT [OBOL:automatic] synonym: "formation of ribonucleoprotein complex" EXACT [OBOL:automatic] synonym: "protein-RNA complex assembly and maintenance" EXACT [OBOL:automatic] synonym: "protein-RNA complex biogenesis" EXACT [OBOL:automatic] synonym: "protein-RNA complex biogenesis and assembly" EXACT [OBOL:automatic] synonym: "protein-RNA complex cell structure assembly" EXACT [OBOL:automatic] synonym: "protein-RNA complex cellular component assembly" EXACT [OBOL:automatic] synonym: "protein-RNA complex complex assembly" EXACT [OBOL:automatic] synonym: "protein-RNA complex formation" EXACT [OBOL:automatic] synonym: "ribonucleoprotein assembly" EXACT [OBOL:automatic] synonym: "ribonucleoprotein assembly and maintenance" EXACT [OBOL:automatic] synonym: "ribonucleoprotein biogenesis" EXACT [OBOL:automatic] synonym: "ribonucleoprotein biogenesis and assembly" EXACT [OBOL:automatic] synonym: "ribonucleoprotein cell structure assembly" EXACT [OBOL:automatic] synonym: "ribonucleoprotein cellular component assembly" EXACT [OBOL:automatic] synonym: "ribonucleoprotein complex assembly and maintenance" EXACT [OBOL:automatic] synonym: "ribonucleoprotein complex biogenesis" EXACT [OBOL:automatic] synonym: "ribonucleoprotein complex biogenesis and assembly" EXACT [OBOL:automatic] synonym: "ribonucleoprotein complex cell structure assembly" EXACT [OBOL:automatic] synonym: "ribonucleoprotein complex cellular component assembly" EXACT [OBOL:automatic] synonym: "ribonucleoprotein complex complex assembly" EXACT [OBOL:automatic] synonym: "ribonucleoprotein complex formation" EXACT [OBOL:automatic] synonym: "ribonucleoprotein formation" EXACT [OBOL:automatic] def: "The aggregation and bonding together of a set of macromolecules to form a RNA-protein complex" [OBOL:automatic] ! seconds spent parsing GO:0022618: 27.97 ! Already have xp for: GO:0022619 generative cell differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of generative cell [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000280])] ! Already have xp for: GO:0022620 vegetative cell differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of vegetative cell [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000296])] ! No relation defined: results_in_complete_developmental_of ! parse: GO:0022621 using "shoot system development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(system, anatomy), OBO_REL:unfolds_in=PO:0009006]) [-8] ! parse: GO:0022621 using "shoot system development" => cdef(GO:0048731, [OBO_REL:results_in_developmental_progression_of=PO:0009006]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the shoot system over time, from its formation to the mature structure." ! PROPOSED: system development that OBO_REL:results_in_developmental_progression_of shoot [cdef(GO:0048731, [OBO_REL:results_in_developmental_progression_of=PO:0009006])] [Term] id: GO:0022621 ! shoot system development intersection_of: GO:0048731 ! system development intersection_of: OBO_REL:results_in_developmental_progression_of PO:0009006 ! shoot ! seconds spent parsing GO:0022621: 9.26 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0022622 using "root system development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(system, anatomy), OBO_REL:unfolds_in=PO:0009005]) [-8] ! parse: GO:0022622 using "root system development" => cdef(GO:0048731, [OBO_REL:results_in_developmental_progression_of=PO:0009005]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the root system over time, from its formation to the mature structure." ! PROPOSED: system development that OBO_REL:results_in_developmental_progression_of root [cdef(GO:0048731, [OBO_REL:results_in_developmental_progression_of=PO:0009005])] [Term] id: GO:0022622 ! root system development intersection_of: GO:0048731 ! system development intersection_of: OBO_REL:results_in_developmental_progression_of PO:0009005 ! root ! seconds spent parsing GO:0022622: 5.16 ! No parse for: GO:0023002 nuclear migration to embryo sac poles ! No parse for: GO:0023003 nuclear migration to the embryo sac center ! No parse for: GO:0030010 establishment of cell polarity ! No parse for: GO:0030029 actin filament-based process ! parse: GO:0030030 using "cell projection organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0042995]) [-2] ! no existing xp def ! def: "A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a prolongation or process extending from a cell, e.g. a flagellum or axon." ! PROPOSED: cellular component organization and biogenesis that OBO_REL:results_in_structural_change_to cell projection [cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0042995])] [Term] id: GO:0030030 ! cell projection organization and biogenesis intersection_of: GO:0016043 ! cellular component organization and biogenesis intersection_of: OBO_REL:results_in_structural_change_to GO:0042995 ! cell projection synonym: "cell projection organization" EXACT [OBOL:automatic] ! seconds spent parsing GO:0030030: 24.35 ! parse: GO:0030031 using "cell projection biogenesis" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0042995]) [-2] ! no existing xp def ! def: "Formation of a prolongation or process extending from a cell, e.g. a flagellum or axon." ! PROPOSED: cellular component assembly that OBO_REL:results_in_creation_of cell projection [cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0042995])] [Term] id: GO:0030031 ! cell projection biogenesis intersection_of: GO:0022607 ! cellular component assembly intersection_of: OBO_REL:results_in_creation_of GO:0042995 ! cell projection synonym: "assembly and maintenance of cell projection" EXACT [OBOL:automatic] synonym: "assembly of cell projection" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of cell projection" EXACT [OBOL:automatic] synonym: "biogenesis of cell projection" EXACT [OBOL:automatic] synonym: "cell projection assembly" EXACT [OBOL:automatic] synonym: "cell projection assembly and maintenance" EXACT [OBOL:automatic] synonym: "cell projection biogenesis and assembly" EXACT [OBOL:automatic] synonym: "cell projection cell structure assembly" EXACT [OBOL:automatic] synonym: "cell projection cellular component assembly" EXACT [OBOL:automatic] synonym: "cell projection complex assembly" EXACT [OBOL:automatic] synonym: "cell projection formation" EXACT [OBOL:automatic] synonym: "cell structure assembly of cell projection" EXACT [OBOL:automatic] synonym: "cellular component assembly of cell projection" EXACT [OBOL:automatic] synonym: "complex assembly of cell projection" EXACT [OBOL:automatic] synonym: "formation of cell projection" EXACT [OBOL:automatic] def: "The aggregation and bonding together of a set of macromolecules to form a cell projection" [OBOL:automatic] ! seconds spent parsing GO:0030031: 21.8 ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0030032 using "lamellipodium biogenesis" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0030027]) [-2] ! parse: GO:0030032 using "lamellipodium biosynthesis" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=GO:0030027]) [-2] ! parse: GO:0030032 using "lamellipodium formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=GO:0030027]) [-2] ! parse: GO:0030032 using "lamellipodium formation" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0030027]) [-2] ! parse: GO:0030032 using "lamellipodium formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0030027]) [-2] ! no existing xp def ! def: "Formation of a lamellipodium, a thin sheetlike extension of the surface of a migrating cell." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of lamellipodium [cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0030027])] [Term] id: GO:0030032 ! lamellipodium biogenesis intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of GO:0030027 ! lamellipodium synonym: "lamellipodium anatomical structure formation" EXACT [OBOL:automatic] synonym: "lamellipodium formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0030032: 17.93 ! parse: GO:0030033 using "microvillus biogenesis" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0005902]) [-2] ! no existing xp def ! def: "Formation of a microvillus, a thin cylindrical membrane-covered projection on the surface of a cell." ! PROPOSED: cellular component assembly that OBO_REL:results_in_creation_of microvillus [cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0005902])] [Term] id: GO:0030033 ! microvillus biogenesis intersection_of: GO:0022607 ! cellular component assembly intersection_of: OBO_REL:results_in_creation_of GO:0005902 ! microvillus synonym: "assembly and maintenance of microvillus" EXACT [OBOL:automatic] synonym: "assembly of microvillus" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of microvillus" EXACT [OBOL:automatic] synonym: "biogenesis of microvillus" EXACT [OBOL:automatic] synonym: "cell structure assembly of microvillus" EXACT [OBOL:automatic] synonym: "cellular component assembly of microvillus" EXACT [OBOL:automatic] synonym: "complex assembly of microvillus" EXACT [OBOL:automatic] synonym: "formation of microvillus" EXACT [OBOL:automatic] synonym: "microvillus assembly" EXACT [OBOL:automatic] synonym: "microvillus assembly and maintenance" EXACT [OBOL:automatic] synonym: "microvillus biogenesis and assembly" EXACT [OBOL:automatic] synonym: "microvillus cell structure assembly" EXACT [OBOL:automatic] synonym: "microvillus cellular component assembly" EXACT [OBOL:automatic] synonym: "microvillus complex assembly" EXACT [OBOL:automatic] synonym: "microvillus formation" EXACT [OBOL:automatic] def: "The aggregation and bonding together of a set of macromolecules to form a microvillus" [OBOL:automatic] ! seconds spent parsing GO:0030033: 5.59 ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0030035 using "microspike biogenesis" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0030175]) [-2] ! parse: GO:0030035 using "microspike biosynthesis" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=GO:0030175]) [-2] ! parse: GO:0030035 using "microspike formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=GO:0030175]) [-2] ! parse: GO:0030035 using "microspike formation" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0030175]) [-2] ! parse: GO:0030035 using "microspike formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0030175]) [-2] ! no existing xp def ! def: "Formation of a microspike, a thin, stiff projection extended from the surface of a migrating cell." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of filopodium [cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0030175])] [Term] id: GO:0030035 ! microspike biogenesis intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of GO:0030175 ! filopodium synonym: "filopodium anatomical structure formation" EXACT [OBOL:automatic] synonym: "filopodium formation" EXACT [OBOL:automatic] synonym: "filopodium formation of an anatomical structure" EXACT [OBOL:automatic] synonym: "microspike anatomical structure formation" EXACT [OBOL:automatic] synonym: "microspike formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0030035: 17.88 ! parse: GO:0030036 using "actin cytoskeleton organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0015629]) [-2] ! no existing xp def ! def: "A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins." ! PROPOSED: cellular component organization and biogenesis that OBO_REL:results_in_structural_change_to actin cytoskeleton [cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0015629])] [Term] id: GO:0030036 ! actin cytoskeleton organization and biogenesis intersection_of: GO:0016043 ! cellular component organization and biogenesis intersection_of: OBO_REL:results_in_structural_change_to GO:0015629 ! actin cytoskeleton synonym: "actin cytoskeleton organization" EXACT [OBOL:automatic] ! seconds spent parsing GO:0030036: 25.07 ! No parse for: GO:0030037 actin filament reorganization during cell cycle ! No parse for: GO:0030041 actin filament polymerization ! No parse for: GO:0030042 actin filament depolymerization ! No parse for: GO:0030043 actin filament fragmentation ! No parse for: GO:0030048 actin filament-based movement ! No parse for: GO:0030049 muscle filament sliding ! No parse for: GO:0030050 vesicle transport along actin filament ! No parse for: GO:0030070 insulin processing ! No parse for: GO:0030072 peptide hormone secretion ! No parse for: GO:0030073 insulin secretion ! Already have xp for: GO:0030097 hemopoiesis ! CURRENT : biosynthetic process that OBO_REL:results_in_creation_of blood cell [cdef(GO:0009058, [OBO_REL:results_in_creation_of=CL:0000081])] ! Already have xp for: GO:0030098 lymphocyte differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of lymphocyte [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000542])] ! Already have xp for: GO:0030099 myeloid cell differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of myeloid cell [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000763])] ! Already have xp for: GO:0030101 natural killer cell activation ! CURRENT : cell activation that OBO_REL:results_in_change_to natural killer cell [cdef(GO:0001775, [OBO_REL:results_in_change_to=CL:0000623])] ! parse: GO:0030150 using "mitochondrial matrix protein import" => cdef(GO:0017038, [OBO_REL:results_in_transport_of=GO:0005759]) [-2] ! no existing xp def ! def: "The import of proteins across the outer and inner mitochondrial membranes into the matrix. Unfolded proteins enter the mitochondrial matrix with a chaperone protein; the information required to target the precursor protein from the cytosol to the mitochondrial matrix is contained within its N-terminal matrix-targeting sequence. Translocation of precursors to the matrix occurs at the rare sites where the outer and inner membranes are close together." ! PROPOSED: protein import that OBO_REL:results_in_transport_of mitochondrial matrix [cdef(GO:0017038, [OBO_REL:results_in_transport_of=GO:0005759])] [Term] id: GO:0030150 ! protein import into mitochondrial matrix intersection_of: GO:0017038 ! protein import intersection_of: OBO_REL:results_in_transport_of GO:0005759 ! mitochondrial matrix ! seconds spent parsing GO:0030150: 19.43 ! No parse for: GO:0030154 cell differentiation ! Already have xp for: GO:0030155 regulation of cell adhesion ! CURRENT : biological regulation that OBO_REL:regulates cell adhesion and regulates cell adhesion [cdef(GO:0065007, [OBO_REL:regulates=GO:0007155, regulates=GO:0007155])] ! No parse for: GO:0030157 pancreatic juice secretion ! Already have xp for: GO:0030168 platelet activation ! CURRENT : cell activation that OBO_REL:results_in_change_to platelet [cdef(GO:0001775, [OBO_REL:results_in_change_to=CL:0000233])] ! Already have xp for: GO:0030182 neuron differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of neuron [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000540])] ! Already have xp for: GO:0030183 B cell differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of B cell [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000236])] ! parse: GO:0030198 using "extracellular matrix organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0031012]) [-2] ! no existing xp def ! def: "A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an extracellular matrix." ! PROPOSED: cellular component organization and biogenesis that OBO_REL:results_in_structural_change_to extracellular matrix [cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0031012])] [Term] id: GO:0030198 ! extracellular matrix organization and biogenesis intersection_of: GO:0016043 ! cellular component organization and biogenesis intersection_of: OBO_REL:results_in_structural_change_to GO:0031012 ! extracellular matrix synonym: "extracellular matrix organization" EXACT [OBOL:automatic] ! seconds spent parsing GO:0030198: 21.9 ! parse: GO:0030199 using "collagen fibril organization" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0043205, OBO_REL:unfolds_in=GO:0005581]) [-3] ! parse: GO:0030199 using "collagen fibril organization" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=cdef(GO:0043205, [OBO_REL:part_of=GO:0005581])]) [-3] ! no existing xp def ! def: "Any process that determines the size and arrangement of collagen fibrils within an extracellular matrix." ! PROPOSED: cellular component organization and biogenesis that OBO_REL:results_in_structural_change_to cdef(GO:0043205, [OBO_REL:part_of=GO:0005581]) [cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=cdef(GO:0043205, [OBO_REL:part_of=GO:0005581])])] [Term] id: GO:0030199 ! collagen fibril organization intersection_of: GO:0016043 ! cellular component organization and biogenesis intersection_of: OBO_REL:results_in_structural_change_to collagen_fibril synonym: "collagen fibril organization and biogenesis" EXACT [OBOL:automatic] synonym: "other collagen fibril organization" EXACT [OBOL:automatic] synonym: "other collagen fibril organization and biogenesis" EXACT [OBOL:automatic] ! seconds spent parsing GO:0030199: 25.4 ! Already have xp for: GO:0030216 keratinocyte differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of keratinocyte [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000312])] ! Already have xp for: GO:0030217 T cell differentiation ! CURRENT : developmental process that OBO_REL:results_in_developmental_progression_of T cell [cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=CL:0000084])] ! Already have xp for: GO:0030220 platelet formation ! CURRENT : biosynthetic process that OBO_REL:results_in_creation_of platelet [cdef(GO:0009058, [OBO_REL:results_in_creation_of=CL:0000233])] ! Already have xp for: GO:0030223 neutrophil differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of neutrophil [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000775])] ! Already have xp for: GO:0030224 monocyte differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of monocyte [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000576])] ! Already have xp for: GO:0030225 macrophage differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of macrophage [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000235])] ! parse: GO:0030239 using "myofibril assembly" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0030016]) [-2] ! no existing xp def ! def: "Formation of myofibrils, the repeating units of striated muscle." ! PROPOSED: cellular component assembly that OBO_REL:results_in_creation_of myofibril [cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0030016])] [Term] id: GO:0030239 ! myofibril assembly intersection_of: GO:0022607 ! cellular component assembly intersection_of: OBO_REL:results_in_creation_of GO:0030016 ! myofibril synonym: "assembly and maintenance of myofibril" EXACT [OBOL:automatic] synonym: "assembly and maintenance of striated muscle fiber" EXACT [OBOL:automatic] synonym: "assembly and maintenance of striated muscle fibre" EXACT [OBOL:automatic] synonym: "assembly of myofibril" EXACT [OBOL:automatic] synonym: "assembly of striated muscle fiber" EXACT [OBOL:automatic] synonym: "assembly of striated muscle fibre" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of myofibril" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of striated muscle fiber" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of striated muscle fibre" EXACT [OBOL:automatic] synonym: "biogenesis of myofibril" EXACT [OBOL:automatic] synonym: "biogenesis of striated muscle fiber" EXACT [OBOL:automatic] synonym: "biogenesis of striated muscle fibre" EXACT [OBOL:automatic] synonym: "cell structure assembly of myofibril" EXACT [OBOL:automatic] synonym: "cell structure assembly of striated muscle fiber" EXACT [OBOL:automatic] synonym: "cell structure assembly of striated muscle fibre" EXACT [OBOL:automatic] synonym: "cellular component assembly of myofibril" EXACT [OBOL:automatic] synonym: "cellular component assembly of striated muscle fiber" EXACT [OBOL:automatic] synonym: "cellular component assembly of striated muscle fibre" EXACT [OBOL:automatic] synonym: "complex assembly of myofibril" EXACT [OBOL:automatic] synonym: "complex assembly of striated muscle fiber" EXACT [OBOL:automatic] synonym: "complex assembly of striated muscle fibre" EXACT [OBOL:automatic] synonym: "formation of myofibril" EXACT [OBOL:automatic] synonym: "formation of striated muscle fiber" EXACT [OBOL:automatic] synonym: "formation of striated muscle fibre" EXACT [OBOL:automatic] synonym: "myofibril assembly and maintenance" EXACT [OBOL:automatic] synonym: "myofibril biogenesis" EXACT [OBOL:automatic] synonym: "myofibril biogenesis and assembly" EXACT [OBOL:automatic] synonym: "myofibril cell structure assembly" EXACT [OBOL:automatic] synonym: "myofibril cellular component assembly" EXACT [OBOL:automatic] synonym: "myofibril complex assembly" EXACT [OBOL:automatic] synonym: "myofibril formation" EXACT [OBOL:automatic] synonym: "striated muscle fiber assembly" EXACT [OBOL:automatic] synonym: "striated muscle fiber assembly and maintenance" EXACT [OBOL:automatic] synonym: "striated muscle fiber biogenesis" EXACT [OBOL:automatic] synonym: "striated muscle fiber biogenesis and assembly" EXACT [OBOL:automatic] synonym: "striated muscle fiber cell structure assembly" EXACT [OBOL:automatic] synonym: "striated muscle fiber cellular component assembly" EXACT [OBOL:automatic] synonym: "striated muscle fiber complex assembly" EXACT [OBOL:automatic] synonym: "striated muscle fiber formation" EXACT [OBOL:automatic] synonym: "striated muscle fibre assembly" EXACT [OBOL:automatic] synonym: "striated muscle fibre assembly and maintenance" EXACT [OBOL:automatic] synonym: "striated muscle fibre biogenesis" EXACT [OBOL:automatic] synonym: "striated muscle fibre biogenesis and assembly" EXACT [OBOL:automatic] synonym: "striated muscle fibre cell structure assembly" EXACT [OBOL:automatic] synonym: "striated muscle fibre cellular component assembly" EXACT [OBOL:automatic] synonym: "striated muscle fibre complex assembly" EXACT [OBOL:automatic] synonym: "striated muscle fibre formation" EXACT [OBOL:automatic] def: "The aggregation and bonding together of a set of macromolecules to form a myofibril" [OBOL:automatic] ! seconds spent parsing GO:0030239: 5.59 ! No parse for: GO:0030240 muscle thin filament assembly ! parse: GO:0030241 using "muscle thick filament assembly" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0032982, OBO_REL:unfolds_in=MA:0000015]) [-3] ! parse: GO:0030241 using "muscle thick filament assembly" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0032982, OBO_REL:unfolds_in=ZFA:0000548]) [-3] ! no existing xp def ! def: "Formation of the myosin-based thick filaments of myofibrils." ! PROPOSED: cellular component assembly that OBO_REL:results_in_creation_of myosin filament and OBO_REL:unfolds_in musculature system [cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0032982, OBO_REL:unfolds_in=ZFA:0000548])] [Term] id: GO:0030241 ! muscle thick filament assembly intersection_of: GO:0022607 ! cellular component assembly intersection_of: OBO_REL:results_in_creation_of GO:0032982 ! myosin filament intersection_of: OBO_REL:unfolds_in ZFA:0000548 ! musculature system synonym: "muscles assembly and maintenance of myosin filament" EXACT [OBOL:automatic] synonym: "muscles assembly and maintenance of myosin thick filament" EXACT [OBOL:automatic] synonym: "muscles assembly and maintenance of thick filament" EXACT [OBOL:automatic] synonym: "muscles assembly of myosin filament" EXACT [OBOL:automatic] synonym: "muscles assembly of myosin thick filament" EXACT [OBOL:automatic] synonym: "muscles assembly of thick filament" EXACT [OBOL:automatic] synonym: "muscles biogenesis and assembly of myosin filament" EXACT [OBOL:automatic] synonym: "muscles biogenesis and assembly of myosin thick filament" EXACT [OBOL:automatic] synonym: "muscles biogenesis and assembly of thick filament" EXACT [OBOL:automatic] synonym: "muscles biogenesis of myosin filament" EXACT [OBOL:automatic] synonym: "muscles biogenesis of myosin thick filament" EXACT [OBOL:automatic] synonym: "muscles biogenesis of thick filament" EXACT [OBOL:automatic] synonym: "muscles cell structure assembly of myosin filament" EXACT [OBOL:automatic] synonym: "muscles cell structure assembly of myosin thick filament" EXACT [OBOL:automatic] synonym: "muscles cell structure assembly of thick filament" EXACT [OBOL:automatic] synonym: "muscles cellular component assembly of myosin filament" EXACT [OBOL:automatic] synonym: "muscles cellular component assembly of myosin thick filament" EXACT [OBOL:automatic] synonym: "muscles cellular component assembly of thick filament" EXACT [OBOL:automatic] synonym: "muscles complex assembly of myosin filament" EXACT [OBOL:automatic] synonym: "muscles complex assembly of myosin thick filament" EXACT [OBOL:automatic] synonym: "muscles complex assembly of thick filament" EXACT [OBOL:automatic] synonym: "muscles formation of myosin filament" EXACT [OBOL:automatic] synonym: "muscles formation of myosin thick filament" EXACT [OBOL:automatic] synonym: "muscles formation of thick filament" EXACT [OBOL:automatic] synonym: "muscles myosin filament assembly" EXACT [OBOL:automatic] synonym: "muscles myosin filament assembly and maintenance" EXACT [OBOL:automatic] synonym: "muscles myosin filament biogenesis" EXACT [OBOL:automatic] synonym: "muscles myosin filament biogenesis and assembly" EXACT [OBOL:automatic] synonym: "muscles myosin filament cell structure assembly" EXACT [OBOL:automatic] synonym: "muscles myosin filament cellular component assembly" EXACT [OBOL:automatic] synonym: "muscles myosin filament complex assembly" EXACT [OBOL:automatic] synonym: "muscles myosin filament formation" EXACT [OBOL:automatic] synonym: "muscles myosin thick filament assembly" EXACT [OBOL:automatic] synonym: "muscles myosin thick filament assembly and maintenance" EXACT [OBOL:automatic] synonym: "muscles myosin thick filament biogenesis" EXACT [OBOL:automatic] synonym: "muscles myosin thick filament biogenesis and assembly" EXACT [OBOL:automatic] synonym: "muscles myosin thick filament cell structure assembly" EXACT [OBOL:automatic] synonym: "muscles myosin thick filament cellular component assembly" EXACT [OBOL:automatic] synonym: "muscles myosin thick filament complex assembly" EXACT [OBOL:automatic] synonym: "muscles myosin thick filament formation" EXACT [OBOL:automatic] synonym: "muscles thick filament assembly" EXACT [OBOL:automatic] synonym: "muscles thick filament assembly and maintenance" EXACT [OBOL:automatic] synonym: "muscles thick filament biogenesis" EXACT [OBOL:automatic] synonym: "muscles thick filament biogenesis and assembly" EXACT [OBOL:automatic] synonym: "muscles thick filament cell structure assembly" EXACT [OBOL:automatic] synonym: "muscles thick filament cellular component assembly" EXACT [OBOL:automatic] synonym: "muscles thick filament complex assembly" EXACT [OBOL:automatic] synonym: "muscles thick filament formation" EXACT [OBOL:automatic] synonym: "musculature system assembly and maintenance of myosin filament" EXACT [OBOL:automatic] synonym: "musculature system assembly and maintenance of myosin thick filament" EXACT [OBOL:automatic] synonym: "musculature system assembly and maintenance of thick filament" EXACT [OBOL:automatic] synonym: "musculature system assembly of myosin filament" EXACT [OBOL:automatic] synonym: "musculature system assembly of myosin thick filament" EXACT [OBOL:automatic] synonym: "musculature system assembly of thick filament" EXACT [OBOL:automatic] synonym: "musculature system biogenesis and assembly of myosin filament" EXACT [OBOL:automatic] synonym: "musculature system biogenesis and assembly of myosin thick filament" EXACT [OBOL:automatic] synonym: "musculature system biogenesis and assembly of thick filament" EXACT [OBOL:automatic] synonym: "musculature system biogenesis of myosin filament" EXACT [OBOL:automatic] synonym: "musculature system biogenesis of myosin thick filament" EXACT [OBOL:automatic] synonym: "musculature system biogenesis of thick filament" EXACT [OBOL:automatic] synonym: "musculature system cell structure assembly of myosin filament" EXACT [OBOL:automatic] synonym: "musculature system cell structure assembly of myosin thick filament" EXACT [OBOL:automatic] synonym: "musculature system cell structure assembly of thick filament" EXACT [OBOL:automatic] synonym: "musculature system cellular component assembly of myosin filament" EXACT [OBOL:automatic] synonym: "musculature system cellular component assembly of myosin thick filament" EXACT [OBOL:automatic] synonym: "musculature system cellular component assembly of thick filament" EXACT [OBOL:automatic] synonym: "musculature system complex assembly of myosin filament" EXACT [OBOL:automatic] synonym: "musculature system complex assembly of myosin thick filament" EXACT [OBOL:automatic] synonym: "musculature system complex assembly of thick filament" EXACT [OBOL:automatic] synonym: "musculature system formation of myosin filament" EXACT [OBOL:automatic] synonym: "musculature system formation of myosin thick filament" EXACT [OBOL:automatic] synonym: "musculature system formation of thick filament" EXACT [OBOL:automatic] synonym: "musculature system myosin filament assembly" EXACT [OBOL:automatic] synonym: "musculature system myosin filament assembly and maintenance" EXACT [OBOL:automatic] synonym: "musculature system myosin filament biogenesis" EXACT [OBOL:automatic] synonym: "musculature system myosin filament biogenesis and assembly" EXACT [OBOL:automatic] synonym: "musculature system myosin filament cell structure assembly" EXACT [OBOL:automatic] synonym: "musculature system myosin filament cellular component assembly" EXACT [OBOL:automatic] synonym: "musculature system myosin filament complex assembly" EXACT [OBOL:automatic] synonym: "musculature system myosin filament formation" EXACT [OBOL:automatic] synonym: "musculature system myosin thick filament assembly" EXACT [OBOL:automatic] synonym: "musculature system myosin thick filament assembly and maintenance" EXACT [OBOL:automatic] synonym: "musculature system myosin thick filament biogenesis" EXACT [OBOL:automatic] synonym: "musculature system myosin thick filament biogenesis and assembly" EXACT [OBOL:automatic] synonym: "musculature system myosin thick filament cell structure assembly" EXACT [OBOL:automatic] synonym: "musculature system myosin thick filament cellular component assembly" EXACT [OBOL:automatic] synonym: "musculature system myosin thick filament complex assembly" EXACT [OBOL:automatic] synonym: "musculature system myosin thick filament formation" EXACT [OBOL:automatic] synonym: "musculature system thick filament assembly" EXACT [OBOL:automatic] synonym: "musculature system thick filament assembly and maintenance" EXACT [OBOL:automatic] synonym: "musculature system thick filament biogenesis" EXACT [OBOL:automatic] synonym: "musculature system thick filament biogenesis and assembly" EXACT [OBOL:automatic] synonym: "musculature system thick filament cell structure assembly" EXACT [OBOL:automatic] synonym: "musculature system thick filament cellular component assembly" EXACT [OBOL:automatic] synonym: "musculature system thick filament complex assembly" EXACT [OBOL:automatic] synonym: "musculature system thick filament formation" EXACT [OBOL:automatic] ! seconds spent parsing GO:0030241: 11.76 ! No parse for: GO:0030242 peroxisome degradation ! No parse for: GO:0030243 cellulose metabolic process ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0030244 using "cellulose formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(cellulose, anatomy)]) [-10] ! no existing xp def ! def: "The chemical reactions and pathways resulting in the formation of cellulose, a linear beta1-4 glucan of molecular mass 50-400 kDa with the pyranose units in the -4C1 conformation." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of anon(cellulose, anatomy) [cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(cellulose, anatomy)])] [Term] id: GO:0030244 ! cellulose biosynthetic process intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of anatomy:cellulose synonym: "cellulose anatomical structure formation" EXACT [OBOL:automatic] synonym: "cellulose formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0030244: 21.13 ! No parse for: GO:0030245 cellulose catabolic process ! No parse for: GO:0030252 growth hormone secretion ! No parse for: GO:0030260 entry into host cell ! No parse for: GO:0030261 chromosome condensation ! parse: GO:0030264 using "nuclear fragmentation during apoptosis" => cdef(GO:0006915, [OBO_REL:results_in_developmental_progression_of=anon(nuclear fragmentation during, anatomy)]) [-29] ! no existing xp def ! def: "The breakdown of the nucleus into small membrane-bounded compartments, or blebs, each of which contain compacted DNA." ! PROPOSED: apoptosis that OBO_REL:results_in_developmental_progression_of anon(nuclear fragmentation during, anatomy) [cdef(GO:0006915, [OBO_REL:results_in_developmental_progression_of=anon(nuclear fragmentation during, anatomy)])] [Term] id: GO:0030264 ! nuclear fragmentation during apoptosis intersection_of: GO:0006915 ! apoptosis intersection_of: OBO_REL:results_in_developmental_progression_of anatomy:nuclear_fragmentation_during synonym: "nuclear fragmentation during apoptotic programmed cell death" EXACT [OBOL:automatic] synonym: "nuclear fragmentation during effector caspase activity" EXACT [OBOL:automatic] synonym: "nuclear fragmentation during programmed cell death by apoptosis" EXACT [OBOL:automatic] synonym: "nuclear fragmentation during signaling (initiator) caspase activity" EXACT [OBOL:automatic] ! seconds spent parsing GO:0030264: 13.88 ! No parse for: GO:0030282 bone mineralization ! No parse for: GO:0030309 poly-N-acetyllactosamine metabolic process ! No parse for: GO:0030310 poly-N-acetyllactosamine catabolic process ! Already have xp for: GO:0030311 poly-N-acetyllactosamine biosynthetic process ! CURRENT : biosynthetic process that OBO_REL:results_in_creation_of poly-N-acetyllactosamine [cdef(GO:0009058, [OBO_REL:results_in_creation_of=cell:poly_-_N_-_acetyllactosamine])] ! Already have xp for: GO:0030316 osteoclast differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of osteoclast [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000092])] ! Already have xp for: GO:0030317 sperm motility ! CURRENT : cell motility that OBO_REL:results_in_movement_of sperm [cdef(GO:0006928, [OBO_REL:results_in_movement_of=CL:0000019])] ! Already have xp for: GO:0030318 melanocyte differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of melanocyte [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000148])] ! No relation defined: results_in_complete_developmental_of ! parse: GO:0030324 using "lung development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000415]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax." ! PROPOSED: developmental process that results_in_complete_developmental_of lung [cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000415])] [Term] id: GO:0030324 ! lung development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of MA:0000415 ! lung ! seconds spent parsing GO:0030324: 4.7 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0030325 using "adrenal gland development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000116]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the adrenal gland over time, from its formation to the mature structure. This gland can either be a discrete structure located bilaterally above each kidney, or a cluster of cells in the head kidney that perform the functions of the adrenal gland. In either case, this organ consists of two cells types, aminergic chromaffin cells and steroidogenic cortical cells." ! PROPOSED: developmental process that results_in_complete_developmental_of adrenal gland [cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000116])] [Term] id: GO:0030325 ! adrenal gland development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of MA:0000116 ! adrenal gland synonym: "suprarenal gland development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0030325: 9.4 ! parse: GO:0030326 using "embryonic limb morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(embryonic limb, anatomy)]) [-15] ! parse: GO:0030326 using "embryonic limb morphogenesis" => cdef(GO:0035108, [OBO_REL:part_of=GO:0009790]) [-2] ! parse: GO:0030326 using "embryonic limb morphogenesis" => cdef(GO:0035108, [OBO_REL:results_in_developmental_progression_of=anon(embryonic, anatomy)]) [-10] ! parse: GO:0030326 using "embryonic limb morphogenesis" => cdef(cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000007]), [OBO_REL:part_of=GO:0009790]) [-3] ! no existing xp def ! def: "The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping." ! PROPOSED: limb morphogenesis that OBO_REL:part_of embryonic development [cdef(GO:0035108, [OBO_REL:part_of=GO:0009790])] [Term] id: GO:0030326 ! embryonic limb morphogenesis intersection_of: GO:0035108 ! limb morphogenesis intersection_of: OBO_REL:part_of GO:0009790 ! embryonic development synonym: "embryogenesis, limb morphogenesis" EXACT [OBOL:automatic] synonym: "embryonal development, limb morphogenesis" EXACT [OBOL:automatic] synonym: "embryonic development, limb morphogenesis" EXACT [OBOL:automatic] def: "A limb morphogenesis that is part of a embryogenesis" [OBOL:automatic] ! seconds spent parsing GO:0030326: 9.62 ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0030381 using "chorion-containing eggshell pattern formation" => cdef(GO:0007389, [OBO_REL:results_in_developmental_progression_of=anon(- containing eggshell, anatomy), OBO_REL:unfolds_in=FBbt:00000038]) [-23] ! parse: GO:0030381 using "chorion-containing eggshell pattern formation" => cdef(GO:0007389, [OBO_REL:results_in_developmental_progression_of=anon(- containing eggshell, anatomy), OBO_REL:unfolds_in=GO:0042600]) [-23] ! parse: GO:0030381 using "chorion-containing eggshell pattern formation" => cdef(GO:0007389, [OBO_REL:results_in_developmental_progression_of=anon(- containing eggshell, anatomy), OBO_REL:unfolds_in=ZFA:0000329]) [-23] ! parse: GO:0030381 using "chorion-containing eggshell pattern formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(- containing eggshell pattern, anatomy), OBO_REL:unfolds_in=FBbt:00000038]) [-31] ! parse: GO:0030381 using "chorion-containing eggshell pattern formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(- containing eggshell pattern, anatomy), OBO_REL:unfolds_in=GO:0042600]) [-31] ! parse: GO:0030381 using "chorion-containing eggshell pattern formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(- containing eggshell pattern, anatomy), OBO_REL:unfolds_in=ZFA:0000329]) [-31] ! no existing xp def ! def: "The regionalization process that gives rise to the structural pattern of a chorion-containing eggshell such as those found in insects." ! PROPOSED: pattern specification process that OBO_REL:results_in_developmental_progression_of anon(- containing eggshell, anatomy) and OBO_REL:unfolds_in chorion [cdef(GO:0007389, [OBO_REL:results_in_developmental_progression_of=anon(- containing eggshell, anatomy), OBO_REL:unfolds_in=ZFA:0000329])] [Term] id: GO:0030381 ! chorion-containing eggshell pattern formation intersection_of: GO:0007389 ! pattern specification process intersection_of: OBO_REL:results_in_developmental_progression_of anatomy:-_containing_eggshell intersection_of: OBO_REL:unfolds_in ZFA:0000329 ! chorion ! seconds spent parsing GO:0030381: 16.32 ! Already have xp for: GO:0030382 sperm mitochondrion organization and biogenesis ! CURRENT : cellular component organization and biogenesis that OBO_REL:results_in_structural_change_to mitochondrion and OBO_REL:unfolds_in sperm [cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0005739, OBO_REL:unfolds_in=CL:0000019])] ! parse: GO:0030397 using "membrane disassembly" => cdef(GO:0022411, [OBO_REL:results_in_breakdown_of=GO:0016020]) [-2] ! no existing xp def ! def: "The controlled breakdown of any cell membrane in the context of a normal process such as autophagy." ! PROPOSED: cellular component disassembly that OBO_REL:results_in_breakdown_of membrane [cdef(GO:0022411, [OBO_REL:results_in_breakdown_of=GO:0016020])] [Term] id: GO:0030397 ! membrane disassembly intersection_of: GO:0022411 ! cellular component disassembly intersection_of: OBO_REL:results_in_breakdown_of GO:0016020 ! membrane synonym: "cell structure disassembly of membrane" EXACT [OBOL:automatic] synonym: "cellular component disassembly of membrane" EXACT [OBOL:automatic] synonym: "disassembly of membrane" EXACT [OBOL:automatic] synonym: "membrane cell structure disassembly" EXACT [OBOL:automatic] synonym: "membrane cellular component disassembly" EXACT [OBOL:automatic] ! seconds spent parsing GO:0030397: 23.78 ! parse: GO:0030398 using "peroxisomal membrane disassembly" => cdef(GO:0022411, [OBO_REL:results_in_breakdown_of=GO:0005778]) [-2] ! no existing xp def ! def: "The controlled breakdown of the membranes of cargo-carrying vesicles formed during peroxisome degradation." ! PROPOSED: cellular component disassembly that OBO_REL:results_in_breakdown_of peroxisomal membrane [cdef(GO:0022411, [OBO_REL:results_in_breakdown_of=GO:0005778])] [Term] id: GO:0030398 ! peroxisomal membrane disassembly intersection_of: GO:0022411 ! cellular component disassembly intersection_of: OBO_REL:results_in_breakdown_of GO:0005778 ! peroxisomal membrane synonym: "cell structure disassembly of peroxisomal membrane" EXACT [OBOL:automatic] synonym: "cell structure disassembly of peroxisome integral membrane receptor" EXACT [OBOL:automatic] synonym: "cellular component disassembly of peroxisomal membrane" EXACT [OBOL:automatic] synonym: "cellular component disassembly of peroxisome integral membrane receptor" EXACT [OBOL:automatic] synonym: "disassembly of peroxisomal membrane" EXACT [OBOL:automatic] synonym: "disassembly of peroxisome integral membrane receptor" EXACT [OBOL:automatic] synonym: "peroxisomal membrane cell structure disassembly" EXACT [OBOL:automatic] synonym: "peroxisomal membrane cellular component disassembly" EXACT [OBOL:automatic] synonym: "peroxisome integral membrane receptor cell structure disassembly" EXACT [OBOL:automatic] synonym: "peroxisome integral membrane receptor cellular component disassembly" EXACT [OBOL:automatic] synonym: "peroxisome integral membrane receptor disassembly" EXACT [OBOL:automatic] ! seconds spent parsing GO:0030398: 24.13 ! No parse for: GO:0030433 ER-associated protein catabolic process ! Already have xp for: GO:0030437 sporulation (sensu Fungi) ! CURRENT : biosynthetic process that OBO_REL:results_in_creation_of ascospore [cdef(GO:0009058, [OBO_REL:results_in_creation_of=CL:0000607])] ! No parse for: GO:0030447 filamentous growth ! No parse for: GO:0030466 chromatin silencing at silent mating-type cassette ! parse: GO:0030472 using "mitotic spindle organisation and biogenesis in nucleus" => cdef(GO:0007052, [OBO_REL:unfolds_in=GO:0005634]) [-2] ! parse: GO:0030472 using "mitotic spindle organisation and biogenesis in nucleus" => cdef(cdef(GO:0007051, [OBO_REL:unfolds_in=GO:0005634]), [OBO_REL:part_of=GO:0007067]) [-3] ! parse: GO:0030472 using "mitotic spindle organization and biogenesis in nucleus" => cdef(GO:0007052, [OBO_REL:unfolds_in=GO:0005634]) [-2] ! parse: GO:0030472 using "mitotic spindle organization and biogenesis in nucleus" => cdef(cdef(GO:0007051, [OBO_REL:unfolds_in=GO:0005634]), [OBO_REL:part_of=GO:0007067]) [-3] ! parse: GO:0030472 using "mitotic spindle organization and biogenesis in nucleus" => cdef(cdef(cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0005819]), [OBO_REL:unfolds_in=GO:0005634]), [OBO_REL:part_of=GO:0007067]) [-4] ! no existing xp def ! def: "A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the microtubule spindle in the nucleus during a mitotic cell cycle, as seen in Fungi." ! PROPOSED: mitotic spindle organization and biogenesis that OBO_REL:unfolds_in nucleus [cdef(GO:0007052, [OBO_REL:unfolds_in=GO:0005634])] [Term] id: GO:0030472 ! mitotic spindle organization and biogenesis in nucleus intersection_of: GO:0007052 ! mitotic spindle organization and biogenesis intersection_of: OBO_REL:unfolds_in GO:0005634 ! nucleus synonym: "spindle organization and biogenesis during mitosis in nucleus" EXACT [OBOL:automatic] synonym: "spindle organization and biogenesis during mitosis in the nucleus" EXACT [OBOL:automatic] synonym: "spindle organization and biogenesis during mitosis through the nucleus" EXACT [OBOL:automatic] ! seconds spent parsing GO:0030472: 39.96 ! No parse for: GO:0030473 nuclear migration, microtubule-mediated ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0030474 using "spindle pole body assembly" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0005816]) [-2] ! parse: GO:0030474 using "spindle pole body biogenesis" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0005816]) [-2] ! parse: GO:0030474 using "spindle pole body biosynthesis" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=GO:0005816]) [-2] ! parse: GO:0030474 using "spindle pole body biosynthesis" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=MA:0000004, OBO_REL:unfolds_in=GO:0000922]) [-3] ! parse: GO:0030474 using "spindle pole body formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=GO:0005816]) [-2] ! parse: GO:0030474 using "spindle pole body formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=MA:0000004, OBO_REL:unfolds_in=GO:0000922]) [-3] ! parse: GO:0030474 using "spindle pole body formation" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0005816]) [-2] ! parse: GO:0030474 using "spindle pole body formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0005816]) [-2] ! parse: GO:0030474 using "spindle pole body formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=MA:0000004, OBO_REL:unfolds_in=GO:0000922]) [-3] ! parse: GO:0030474 using "spindle pole body formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(pole body, anatomy), OBO_REL:unfolds_in=GO:0005819]) [-11] ! no existing xp def ! def: "Construction of a new spindle pole body." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of spindle pole body [cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0005816])] [Term] id: GO:0030474 ! spindle pole body duplication intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of GO:0005816 ! spindle pole body synonym: "spindle pole body anatomical structure formation" EXACT [OBOL:automatic] synonym: "spindle pole body formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0030474: 129.15 ! No parse for: GO:0030476 spore wall assembly (sensu Fungi) ! No parse for: GO:0030488 tRNA methylation ! No parse for: GO:0030509 BMP signaling pathway ! No parse for: GO:0030522 intracellular receptor-mediated signaling pathway ! parse: GO:0030534 using "adult behavioral response to stimulus" => cdef(GO:0050896, [OBO_REL:part_of=GO:0007610, OBO_REL:unfolds_in=FBbt:00003004]) [-3] ! no existing xp def ! def: "Behavior in a fully developed and mature organism." ! PROPOSED: response to stimulus that OBO_REL:part_of behavior and OBO_REL:unfolds_in adult [cdef(GO:0050896, [OBO_REL:part_of=GO:0007610, OBO_REL:unfolds_in=FBbt:00003004])] [Term] id: GO:0030534 ! adult behavior intersection_of: GO:0050896 ! response to stimulus intersection_of: OBO_REL:part_of GO:0007610 ! behavior intersection_of: OBO_REL:unfolds_in FBbt:00003004 ! adult synonym: "imago behavioral physiological response to stimulus" EXACT [OBOL:automatic] synonym: "imago behavioral response to stimulus" EXACT [OBOL:automatic] synonym: "imago behavioral response to stimulus, physiological response to stimulus" EXACT [OBOL:automatic] synonym: "imago behavioral response to stimulus, response to stimulus" EXACT [OBOL:automatic] synonym: "imago behavioural response to stimulus, physiological response to stimulus" EXACT [OBOL:automatic] synonym: "imago behavioural response to stimulus, response to stimulus" EXACT [OBOL:automatic] synonym: "imago physiological response to stimulus during behavior" EXACT [OBOL:automatic] synonym: "imago physiological response to stimulus during behavioral response to stimulus" EXACT [OBOL:automatic] synonym: "imago physiological response to stimulus during behaviour" EXACT [OBOL:automatic] synonym: "imago physiological response to stimulus during behavioural response to stimulus" EXACT [OBOL:automatic] synonym: "imago physiological response to stimulus involved in behavior" EXACT [OBOL:automatic] synonym: "imago physiological response to stimulus involved in behavioral response to stimulus" EXACT [OBOL:automatic] synonym: "imago physiological response to stimulus involved in behaviour" EXACT [OBOL:automatic] synonym: "imago physiological response to stimulus involved in behavioural response to stimulus" EXACT [OBOL:automatic] synonym: "imago physiological response to stimulus of behavior" EXACT [OBOL:automatic] synonym: "imago physiological response to stimulus of behavioral response to stimulus" EXACT [OBOL:automatic] synonym: "imago physiological response to stimulus of behaviour" EXACT [OBOL:automatic] synonym: "imago physiological response to stimulus of behavioural response to stimulus" EXACT [OBOL:automatic] synonym: "imago physiological response to stimulus with behavior" EXACT [OBOL:automatic] synonym: "imago physiological response to stimulus with behavioral response to stimulus" EXACT [OBOL:automatic] synonym: "imago physiological response to stimulus with behaviour" EXACT [OBOL:automatic] synonym: "imago physiological response to stimulus with behavioural response to stimulus" EXACT [OBOL:automatic] ! seconds spent parsing GO:0030534: 33.64 ! No parse for: GO:0030536 larval feeding behavior ! No parse for: GO:0030537 larval behavior ! parse: GO:0030538 using "embryonic genital morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(embryonic genital, anatomy)]) [-18] ! parse: GO:0030538 using "embryonic genital morphogenesis" => cdef(GO:0035112, [OBO_REL:part_of=GO:0009790]) [-2] ! parse: GO:0030538 using "embryonic genital morphogenesis" => cdef(GO:0035112, [OBO_REL:results_in_developmental_progression_of=anon(embryonic, anatomy)]) [-10] ! parse: GO:0030538 using "embryonic genital morphogenesis" => cdef(cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(genital, anatomy)]), [OBO_REL:part_of=GO:0009790]) [-9] ! parse: GO:0030538 using "embryonic genitalia morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(embryonic genitalia, anatomy)]) [-20] ! parse: GO:0030538 using "embryonic genitalia morphogenesis" => cdef(GO:0035112, [OBO_REL:part_of=GO:0009790]) [-2] ! parse: GO:0030538 using "embryonic genitalia morphogenesis" => cdef(GO:0035112, [OBO_REL:results_in_developmental_progression_of=anon(embryonic, anatomy)]) [-10] ! parse: GO:0030538 using "embryonic genitalia morphogenesis" => cdef(cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00004826]), [OBO_REL:part_of=GO:0009790]) [-3] ! no existing xp def ! def: "The process, occurring in the embryo, by which the anatomical structures of the genitalia are generated and organized. Morphogenesis pertains to the creation of form." ! PROPOSED: genitalia morphogenesis that OBO_REL:part_of embryonic development [cdef(GO:0035112, [OBO_REL:part_of=GO:0009790])] [Term] id: GO:0030538 ! embryonic genitalia morphogenesis intersection_of: GO:0035112 ! genitalia morphogenesis intersection_of: OBO_REL:part_of GO:0009790 ! embryonic development synonym: "embryogenesis, genital morphogenesis" EXACT [OBOL:automatic] synonym: "embryogenesis, genitalia morphogenesis" EXACT [OBOL:automatic] synonym: "embryonal development, genital morphogenesis" EXACT [OBOL:automatic] synonym: "embryonal development, genitalia morphogenesis" EXACT [OBOL:automatic] synonym: "embryonic development, genital morphogenesis" EXACT [OBOL:automatic] synonym: "embryonic development, genitalia morphogenesis" EXACT [OBOL:automatic] def: "A genital morphogenesis that is part of a embryogenesis" [OBOL:automatic] ! seconds spent parsing GO:0030538: 18.23 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0030539 using "male genital development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(genital, anatomy), OBO_REL:unfolds_in=cell:male]) [-9] ! parse: GO:0030539 using "male genital development" => cdef(GO:0048806, [OBO_REL:results_in_developmental_progression_of=cell:male]) [-2] ! parse: GO:0030539 using "male genitalia development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=FBbt:00004826, OBO_REL:unfolds_in=cell:male]) [-3] ! parse: GO:0030539 using "male genitalia development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00004826, OBO_REL:unfolds_in=cell:male]) [-3] ! parse: GO:0030539 using "male genitalia development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00004828]) [-2] ! parse: GO:0030539 using "male genitalia development" => cdef(GO:0048806, [OBO_REL:results_in_developmental_progression_of=cell:male]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the male genitalia over time, from its formation to the mature structure." ! PROPOSED: genitalia development that OBO_REL:results_in_developmental_progression_of male [cdef(GO:0048806, [OBO_REL:results_in_developmental_progression_of=cell:male])] [Term] id: GO:0030539 ! male genitalia development intersection_of: GO:0048806 ! genitalia development intersection_of: OBO_REL:results_in_developmental_progression_of cell:male ! male ! seconds spent parsing GO:0030539: 17.03 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0030540 using "female genital development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(genital, anatomy), OBO_REL:unfolds_in=cell:female]) [-9] ! parse: GO:0030540 using "female genital development" => cdef(GO:0048806, [OBO_REL:results_in_developmental_progression_of=cell:female]) [-2] ! parse: GO:0030540 using "female genitalia development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=FBbt:00004826, OBO_REL:unfolds_in=cell:female]) [-3] ! parse: GO:0030540 using "female genitalia development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00004826, OBO_REL:unfolds_in=cell:female]) [-3] ! parse: GO:0030540 using "female genitalia development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00004827]) [-2] ! parse: GO:0030540 using "female genitalia development" => cdef(GO:0048806, [OBO_REL:results_in_developmental_progression_of=cell:female]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the female genitalia over time, from formation to the mature structure." ! PROPOSED: genitalia development that OBO_REL:results_in_developmental_progression_of female [cdef(GO:0048806, [OBO_REL:results_in_developmental_progression_of=cell:female])] [Term] id: GO:0030540 ! female genitalia development intersection_of: GO:0048806 ! genitalia development intersection_of: OBO_REL:results_in_developmental_progression_of cell:female ! female ! seconds spent parsing GO:0030540: 12.92 ! No parse for: GO:0030573 bile acid catabolic process ! No parse for: GO:0030574 collagen catabolic process ! parse: GO:0030575 using "nuclear body organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0016604]) [-2] ! no existing xp def ! def: "A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of any of the extra-nucleolar nuclear domains usually visualized by confocal microscopy and fluorescent antibodies to specific proteins." ! PROPOSED: cellular component organization and biogenesis that OBO_REL:results_in_structural_change_to nuclear body [cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0016604])] [Term] id: GO:0030575 ! nuclear body organization and biogenesis intersection_of: GO:0016043 ! cellular component organization and biogenesis intersection_of: OBO_REL:results_in_structural_change_to GO:0016604 ! nuclear body synonym: "nuclear body organization" EXACT [OBOL:automatic] ! seconds spent parsing GO:0030575: 11.26 ! parse: GO:0030576 using "Cajal body organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0015030]) [-2] ! no existing xp def ! def: "A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of Cajal bodies, nuclear bodies that appear ultrastructurally as a tangle of coiled, electron-dense threads roughly 0.5 micrometers in diameter and are enriched in ribonucleoproteins, and certain general RNA polymerase II transcription factors." ! PROPOSED: cellular component organization and biogenesis that OBO_REL:results_in_structural_change_to Cajal body [cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0015030])] [Term] id: GO:0030576 ! Cajal body organization and biogenesis intersection_of: GO:0016043 ! cellular component organization and biogenesis intersection_of: OBO_REL:results_in_structural_change_to GO:0015030 ! Cajal body synonym: "Cajal body organization" EXACT [OBOL:automatic] synonym: "Gems organization" EXACT [OBOL:automatic] synonym: "Gems organization and biogenesis" EXACT [OBOL:automatic] synonym: "coiled body organization" EXACT [OBOL:automatic] synonym: "coiled body organization and biogenesis" EXACT [OBOL:automatic] ! seconds spent parsing GO:0030576: 11.26 ! parse: GO:0030577 using "Lands organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0016606]) [-2] ! no existing xp def ! def: "A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of Lands, a class of nuclear body that react against SP140 auto-antibodies." ! PROPOSED: cellular component organization and biogenesis that OBO_REL:results_in_structural_change_to Lands [cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0016606])] [Term] id: GO:0030577 ! Lands organization and biogenesis intersection_of: GO:0016043 ! cellular component organization and biogenesis intersection_of: OBO_REL:results_in_structural_change_to GO:0016606 ! Lands synonym: "Lands organization" EXACT [OBOL:automatic] ! seconds spent parsing GO:0030577: 11.17 ! parse: GO:0030578 using "PML body organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0016605]) [-2] ! no existing xp def ! def: "A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of PML bodies, a class of nuclear body; they react against SP100 auto-antibodies (PML = promyelocytic leukemia)." ! PROPOSED: cellular component organization and biogenesis that OBO_REL:results_in_structural_change_to PML body [cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0016605])] [Term] id: GO:0030578 ! PML body organization and biogenesis intersection_of: GO:0016043 ! cellular component organization and biogenesis intersection_of: OBO_REL:results_in_structural_change_to GO:0016605 ! PML body synonym: "ND 1 0 organization" EXACT [OBOL:automatic] synonym: "ND 1 0 organization and biogenesis" EXACT [OBOL:automatic] synonym: "PML body organization" EXACT [OBOL:automatic] synonym: "nuclear dot organization" EXACT [OBOL:automatic] synonym: "nuclear dot organization and biogenesis" EXACT [OBOL:automatic] ! seconds spent parsing GO:0030578: 11.24 ! No parse for: GO:0030579 ubiquitin-dependent SMAD protein catabolic process ! parse: GO:0030581 using "host cell protein transport" => cdef(GO:0015031, [OBO_REL:results_in_transport_of=CL:0000000, OBO_REL:unfolds_in=GO:0018995]) [-3] ! parse: GO:0030581 using "host cell protein transport" => cdef(GO:0015031, [OBO_REL:results_in_transport_of=GO:0043657]) [-2] ! parse: GO:0030581 using "host cell protein transport" => cdef(GO:0015031, [OBO_REL:results_in_transport_of=ZFA:0009000, OBO_REL:unfolds_in=GO:0018995]) [-3] ! parse: GO:0030581 using "intracellular protein transport in host" => cdef(GO:0006886, [OBO_REL:unfolds_in=GO:0018995]) [-2] ! parse: GO:0030581 using "intracellular protein transport in host" => cdef(GO:0015031, [OBO_REL:unfolds_in=GO:0018995, OBO_REL:unfolds_in=GO:0005622]) [-3] ! parse: GO:0030581 using "intracellular protein transport in host" => cdef(cdef(GO:0015031, [OBO_REL:results_in_transport_of=GO:0005622]), [OBO_REL:unfolds_in=GO:0018995]) [-3] ! no existing xp def ! def: "The directed movement of a symbiont's proteins within a cell of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction." ! PROPOSED: protein transport that OBO_REL:results_in_transport_of host cell [cdef(GO:0015031, [OBO_REL:results_in_transport_of=GO:0043657])] [Term] id: GO:0030581 ! intracellular protein transport in host intersection_of: GO:0015031 ! protein transport intersection_of: OBO_REL:results_in_transport_of GO:0043657 ! host cell ! seconds spent parsing GO:0030581: 31.18 ! No relation defined: results_in_complete_developmental_of ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0030582 using "fruiting body development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(fruiting body, anatomy)]) [-14] ! parse: GO:0030582 using "fruiting body formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(fruiting body, anatomy)]) [-14] ! no existing xp def ! def: "Formation of a multicellular structure that contains spores." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of anon(fruiting body, anatomy) [cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(fruiting body, anatomy)])] [Term] id: GO:0030582 ! fruiting body development intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of anatomy:fruiting_body synonym: "fruiting body anatomical structure formation" EXACT [OBOL:automatic] synonym: "fruiting body formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0030582: 8.65 ! No parse for: GO:0030583 fruiting body development (sensu Bacteria) ! No parse for: GO:0030584 fruiting body development (sensu Fungi) ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0030587 using "sorocarp formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(sorocarp, anatomy)]) [-9] ! no existing xp def ! def: "The process by which a cellular slime mold forms the terminally differentiated organism that consists of a long stalk on top of which sits the sorus that contains the spores. As in, but not restricted to, the taxon Dictyosteliida (Dictyosteliida, ncbi_taxonomy_id:33083)." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of anon(sorocarp, anatomy) [cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(sorocarp, anatomy)])] [Term] id: GO:0030587 ! fruiting body development (sensu Dictyosteliida) intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of anatomy:sorocarp synonym: "sorocarp anatomical structure formation" EXACT [OBOL:automatic] synonym: "sorocarp formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0030587: 17.79 ! Already have xp for: GO:0030593 neutrophil chemotaxis ! CURRENT : chemotaxis that OBO_REL:results_in_movement_of neutrophil [cdef(GO:0006935, [OBO_REL:results_in_movement_of=CL:0000775])] ! Already have xp for: GO:0030595 leukocyte chemotaxis ! CURRENT : chemotaxis that OBO_REL:results_in_movement_of leukocyte [cdef(GO:0006935, [OBO_REL:results_in_movement_of=CL:0000738])] ! No parse for: GO:0030702 chromatin silencing at centromere ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0030704 using "vitelline membrane formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=FBbt:00000042]) [-2] ! parse: GO:0030704 using "vitelline membrane formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=FBbt:00000042]) [-2] ! no existing xp def ! def: "Construction of the vitelline membrane portion of the egg shell, a rigid structure required to maintain the shape of the egg." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of vitelline membrane [cdef(GO:0048646, [OBO_REL:results_in_formation_of=FBbt:00000042])] [Term] id: GO:0030704 ! vitelline membrane formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of FBbt:00000042 ! vitelline membrane ! seconds spent parsing GO:0030704: 5.25 ! Already have xp for: GO:0030705 cytoskeleton-dependent intracellular transport ! CURRENT : intracellular transport that OBO_REL:dependent_on cytoskeleton [cdef(GO:0046907, [OBO_REL:dependent_on=GO:0005856])] ! Already have xp for: GO:0030706 germarium-derived oocyte differentiation ! CURRENT : oocyte differentiation that OBO_REL:results_in_developmental_progression_of germarium-derived [cdef(GO:0009994, [OBO_REL:results_in_developmental_progression_of=cell:germarium_-_derived])] ! No parse for: GO:0030707 ovarian follicle cell development (sensu Insecta) ! parse: GO:0030708 using "germarium-derived female germ-line cyst encapsulation" => cdef(GO:0048138, [OBO_REL:results_in_developmental_progression_of=cell:female, OBO_REL:unfolds_in=cell:germarium_-_derived]) [-3] ! parse: GO:0030708 using "germarium-derived female germ-line cyst encapsulation" => cdef(GO:0048138, [OBO_REL:results_in_developmental_progression_of=anon(- derived female, anatomy), OBO_REL:unfolds_in=FBbt:00004866]) [-18] ! parse: GO:0030708 using "germarium-derived female germ-line cyst encapsulation" => cdef(GO:0048138, [OBO_REL:results_in_developmental_progression_of=cdef(FBbt:00004866, [OBO_REL:derives_from=cell:female])]) [-3] ! parse: GO:0030708 using "germarium-derived female germ-line cyst encapsulation" => cdef(GO:0048138, [OBO_REL:results_in_developmental_progression_of=cdef(cell:female, [OBO_REL:derives_from=FBbt:00004866])]) [-3] ! parse: GO:0030708 using "germarium-derived female germ-line cyst encapsulation" => cdef(GO:0048139, [OBO_REL:results_in_developmental_progression_of=cell:germarium_-_derived]) [-2] ! parse: GO:0030708 using "germarium-derived female germ-line cyst encapsulation" => cdef(GO:0048139, [OBO_REL:results_in_developmental_progression_of=anon(- derived, anatomy), OBO_REL:unfolds_in=FBbt:00004866]) [-11] ! no existing xp def ! def: "Formation of a single follicular epithelium around the germ-line derived cells of a cyst formed in the female gonad." ! PROPOSED: female germ-line cyst encapsulation that OBO_REL:results_in_developmental_progression_of germarium-derived [cdef(GO:0048139, [OBO_REL:results_in_developmental_progression_of=cell:germarium_-_derived])] [Term] id: GO:0030708 ! germarium-derived female germ-line cyst encapsulation intersection_of: GO:0048139 ! female germ-line cyst encapsulation intersection_of: OBO_REL:results_in_developmental_progression_of cell:germarium_-_derived ! germarium-derived ! seconds spent parsing GO:0030708: 50.61 ! No parse for: GO:0030709 border follicle cell delamination ! No parse for: GO:0030713 stalk formation (sensu Insecta) ! Already have xp for: GO:0030715 oocyte growth in germarium-derived egg chamber ! CURRENT : oocyte growth that OBO_REL:unfolds_in germarium-derived egg chamber [cdef(GO:0001555, [OBO_REL:unfolds_in=cell:germarium_-_derived_egg_chamber])] ! Already have xp for: GO:0030716 oocyte fate determination ! CURRENT : cell fate determination that OBO_REL:results_in_determination_to oocyte [cdef(GO:0001709, [OBO_REL:results_in_determination_to=CL:0000023])] ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0030717 using "karyosome formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=FBbt:00004889]) [-2] ! parse: GO:0030717 using "karyosome formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=FBbt:00004889]) [-2] ! no existing xp def ! def: "Condensation of DNA in the oocyte nucleus into a compact spherical structure called the karyosome." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of karyosome [cdef(GO:0048646, [OBO_REL:results_in_formation_of=FBbt:00004889])] [Term] id: GO:0030717 ! karyosome formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of FBbt:00004889 ! karyosome ! seconds spent parsing GO:0030717: 5.16 ! Already have xp for: GO:0030718 germ-line stem cell maintenance ! CURRENT : stem cell maintenance that OBO_REL:results_in_developmental_progression_of germ-line [cdef(GO:0019827, [OBO_REL:results_in_developmental_progression_of=cell:germ_-_line])] ! parse: GO:0030719 using "polar granule organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0018994]) [-2] ! no existing xp def ! def: "A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of polar granules, cytoplasmic, non-membranous RNA/protein complex aggregates in the primordial germ cells of many higher eukaryotes." ! PROPOSED: cellular component organization and biogenesis that OBO_REL:results_in_structural_change_to polar granule [cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0018994])] [Term] id: GO:0030719 ! polar granule organization and biogenesis intersection_of: GO:0016043 ! cellular component organization and biogenesis intersection_of: OBO_REL:results_in_structural_change_to GO:0018994 ! polar granule synonym: "germline granule organization" EXACT [OBOL:automatic] synonym: "germline granule organization and biogenesis" EXACT [OBOL:automatic] synonym: "polar granule organization" EXACT [OBOL:automatic] ! seconds spent parsing GO:0030719: 11.19 ! Already have xp for: GO:0030720 oocyte localization during germarium-derived egg chamber formation ! CURRENT : oocyte_localization that OBO_REL:part_of germarium-derived egg chamber formation [cdef(oocyte_localization, [OBO_REL:part_of=GO:0007293])] ! parse: GO:0030721 using "spectrosome organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0045170]) [-2] ! no existing xp def ! def: "A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the spectrosome, a germline specific spherical organelle that is the precursor to the fusome." ! PROPOSED: cellular component organization and biogenesis that OBO_REL:results_in_structural_change_to spectrosome [cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0045170])] [Term] id: GO:0030721 ! spectrosome organization and biogenesis intersection_of: GO:0016043 ! cellular component organization and biogenesis intersection_of: OBO_REL:results_in_structural_change_to GO:0045170 ! spectrosome synonym: "spectrosome organization" EXACT [OBOL:automatic] ! seconds spent parsing GO:0030721: 12.4 ! Already have xp for: GO:0030722 establishment of oocyte nucleus localization during oocyte axis determination ! CURRENT : oocyte nucleus localization during oocyte axis determination that OBO_REL:results_in_localization_of establishment of [cdef(GO:0051663, [OBO_REL:results_in_localization_of=cell:establishment_of])] ! No parse for: GO:0030723 ovarian fusome organization and biogenesis ! No parse for: GO:0030724 testicular fusome organization and biogenesis ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0030725 using "ring canal formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=FBbt:00005409]) [-2] ! parse: GO:0030725 using "ring canal formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=FBbt:00005409]) [-2] ! no existing xp def ! def: "Assembly of the cytoplasmic bridges between developing spermatogonial or oogonial cysts." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of ring canal [cdef(GO:0048646, [OBO_REL:results_in_formation_of=FBbt:00005409])] [Term] id: GO:0030725 ! ring canal formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of FBbt:00005409 ! ring canal ! seconds spent parsing GO:0030725: 5.19 ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0030726 using "testicular ring canal formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(testicular ring canal, anatomy)]) [-22] ! no existing xp def ! def: "Formation of the intercellular bridges that connect the germ-line cells of a male cyst." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of anon(testicular ring canal, anatomy) [cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(testicular ring canal, anatomy)])] [Term] id: GO:0030726 ! testicular ring canal formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of anatomy:testicular_ring_canal synonym: "testicular ring canal anatomical structure formation" EXACT [OBOL:automatic] synonym: "testicular ring canal formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0030726: 4.49 ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0030727 using "germarium-derived female germ-line cyst formation" => cdef(GO:0048134, [OBO_REL:increases_population_size_of=cell:female, OBO_REL:unfolds_in=cell:germarium_-_derived]) [-3] ! parse: GO:0030727 using "germarium-derived female germ-line cyst formation" => cdef(GO:0048134, [OBO_REL:increases_population_size_of=cdef(cell:female, [OBO_REL:derives_from=FBbt:00004866])]) [-3] ! parse: GO:0030727 using "germarium-derived female germ-line cyst formation" => cdef(GO:0048135, [OBO_REL:increases_population_size_of=cell:germarium_-_derived]) [-2] ! parse: GO:0030727 using "germarium-derived female germ-line cyst formation" => cdef(GO:0048646, [and=OBO_REL:results_in_formation_of(anon(cyst, anatomy))/unfolds_in(cell:germ_-_line), OBO_REL:unfolds_in=cdef(FBbt:00004866, [OBO_REL:derives_from=cell:female])]) [-4] ! parse: GO:0030727 using "germarium-derived female germ-line cyst formation" => cdef(GO:0048646, [and=OBO_REL:results_in_formation_of(anon(cyst, anatomy))/unfolds_in(cell:germ_-_line), OBO_REL:unfolds_in=cdef(cell:female, [OBO_REL:derives_from=FBbt:00004866])]) [-4] ! parse: GO:0030727 using "germarium-derived female germ-line cyst formation" => cdef(GO:0048646, [and=and(OBO_REL:results_in_formation_of(anon(cyst, anatomy)), unfolds_in(cell:germ_-_line))/unfolds_in(cell:female), OBO_REL:unfolds_in=cell:germarium_-_derived]) [-3] ! parse: GO:0030727 using "germarium-derived female germ-line cyst formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(- derived female germ-line cyst, anatomy), OBO_REL:unfolds_in=FBbt:00004866]) [-33] ! no existing xp def ! def: "Formation of a cluster of germ-line cells, in the female gonad, derived from a single founder cell (cystoblast)." ! PROPOSED: female germ-line cyst formation that OBO_REL:increases_population_size_of germarium-derived [cdef(GO:0048135, [OBO_REL:increases_population_size_of=cell:germarium_-_derived])] [Term] id: GO:0030727 ! germarium-derived female germ-line cyst formation intersection_of: GO:0048135 ! female germ-line cyst formation intersection_of: OBO_REL:increases_population_size_of cell:germarium_-_derived ! germarium-derived ! seconds spent parsing GO:0030727: 51.21 ! Already have xp for: GO:0030835 negative regulation of actin filament depolymerization ! CURRENT : biological regulation that OBO_REL:negatively_regulates actin filament depolymerization and regulates actin filament depolymerization [cdef(GO:0065007, [OBO_REL:negatively_regulates=GO:0030042, regulates=GO:0030042])] ! Already have xp for: GO:0030836 positive regulation of actin filament depolymerization ! CURRENT : biological regulation that OBO_REL:positively_regulates actin filament depolymerization and regulates actin filament depolymerization [cdef(GO:0065007, [OBO_REL:positively_regulates=GO:0030042, regulates=GO:0030042])] ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0030850 using "prostate development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(prostate, anatomy)]) [-9] ! parse: GO:0030850 using "prostate gland development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000404]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the prostate gland over time, from its formation to the mature structure. The prostate gland is a partly muscular, partly glandular body that is situated near the base of the mammalian male urethra and secretes an alkaline viscid fluid which is a major constituent of the ejaculatory fluid." ! PROPOSED: developmental process that results_in_complete_developmental_of prostate gland [cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000404])] [Term] id: GO:0030850 ! prostate gland development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of MA:0000404 ! prostate gland ! seconds spent parsing GO:0030850: 8.88 ! Already have xp for: GO:0030851 granulocyte differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of granulocyte [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000094])] ! Already have xp for: GO:0030855 epithelial cell differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of epithelial cell [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000066])] ! parse: GO:0030865 using "cortical cytoskeleton organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0030863]) [-2] ! no existing xp def ! def: "A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures in the cell cortex, i.e. just beneath the plasma membrane." ! PROPOSED: cellular component organization and biogenesis that OBO_REL:results_in_structural_change_to cortical cytoskeleton [cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0030863])] [Term] id: GO:0030865 ! cortical cytoskeleton organization and biogenesis intersection_of: GO:0016043 ! cellular component organization and biogenesis intersection_of: OBO_REL:results_in_structural_change_to GO:0030863 ! cortical cytoskeleton synonym: "cortical cytoskeleton organization" EXACT [OBOL:automatic] ! seconds spent parsing GO:0030865: 11.32 ! parse: GO:0030866 using "cortical actin cytoskeleton organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0030864]) [-2] ! no existing xp def ! def: "A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of actin-based cytoskeletal structures in the cell cortex, i.e. just beneath the plasma membrane." ! PROPOSED: cellular component organization and biogenesis that OBO_REL:results_in_structural_change_to cortical actin cytoskeleton [cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0030864])] [Term] id: GO:0030866 ! cortical actin cytoskeleton organization and biogenesis intersection_of: GO:0016043 ! cellular component organization and biogenesis intersection_of: OBO_REL:results_in_structural_change_to GO:0030864 ! cortical actin cytoskeleton synonym: "cortical actin cytoskeleton organization" EXACT [OBOL:automatic] ! seconds spent parsing GO:0030866: 11.48 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0030878 using "thyroid gland development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000129]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the thyroid gland over time, from its formation to the mature structure. The thyroid gland is an endoderm-derived gland that produces thyroid hormone." ! PROPOSED: developmental process that results_in_complete_developmental_of thyroid gland [cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000129])] [Term] id: GO:0030878 ! thyroid gland development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of MA:0000129 ! thyroid gland ! seconds spent parsing GO:0030878: 4.74 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0030879 using "mammary gland development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000145]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the mammary gland over time, from its formation to the mature structure. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk." ! PROPOSED: developmental process that results_in_complete_developmental_of mammary gland [cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000145])] [Term] id: GO:0030879 ! mammary gland development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of MA:0000145 ! mammary gland ! seconds spent parsing GO:0030879: 4.76 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0030900 using "forebrain development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000170]) [-2] ! parse: GO:0030900 using "forebrain development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000109]) [-2] ! parse: GO:0030900 using "forebrain development" => cdef(GO:0032502, [results_in_complete_developmental_of=cell:forebrain]) [-2] ! parse: GO:0030900 using "prosencephalon development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000170]) [-2] ! parse: GO:0030900 using "prosencephalon development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000109]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions)." ! PROPOSED: developmental process that results_in_complete_developmental_of forebrain [cdef(GO:0032502, [results_in_complete_developmental_of=cell:forebrain])] [Term] id: GO:0030900 ! forebrain development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of cell:forebrain ! forebrain ! seconds spent parsing GO:0030900: 11.96 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0030901 using "mesencephalon development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000207]) [-2] ! parse: GO:0030901 using "mesencephalon development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000128]) [-2] ! parse: GO:0030901 using "midbrain development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000207]) [-2] ! parse: GO:0030901 using "midbrain development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000128]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the midbrain over time, from its formation to the mature structure. The midbrain is the middle division of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes a ventral part containing the cerebral peduncles and a dorsal tectum containing the corpora quadrigemina and that surrounds the aqueduct of Sylvius connecting the third and fourth ventricles)." ! PROPOSED: developmental process that results_in_complete_developmental_of midbrain [cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000128])] [Term] id: GO:0030901 ! midbrain development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of ZFA:0000128 ! midbrain ! seconds spent parsing GO:0030901: 10.8 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0030902 using "hindbrain development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000195]) [-2] ! parse: GO:0030902 using "hindbrain development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000029]) [-2] ! parse: GO:0030902 using "rhombencephalon development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000195]) [-2] ! parse: GO:0030902 using "rhombencephalon development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000029]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the hindbrain over time, from its formation to the mature structure. The hindbrain is the posterior of the three primary divisions of the developing chordate brain, or the corresponding part of the adult brain (in vertebrates, includes the cerebellum, pons, and medulla oblongata and controls the autonomic functions and equilibrium)." ! PROPOSED: developmental process that results_in_complete_developmental_of hindbrain [cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000029])] [Term] id: GO:0030902 ! hindbrain development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of ZFA:0000029 ! hindbrain ! seconds spent parsing GO:0030902: 10.72 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0030903 using "notochord development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000135]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the notochord over time, from its formation to the mature structure. The notochord is a mesoderm-derived structure located ventral of the developing nerve cord. In vertebrates, the notochord serves as a core around which other mesodermal cells form the vertebrae. In the most primitive chordates, which lack vertebrae, the notochord persists as a substitute for a vertebral column." ! PROPOSED: developmental process that results_in_complete_developmental_of notochord [cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000135])] [Term] id: GO:0030903 ! notochord development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of ZFA:0000135 ! notochord ! seconds spent parsing GO:0030903: 4.71 ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0030910 using "olfactory placode formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=ZFA:0000048]) [-2] ! parse: GO:0030910 using "olfactory placode formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0000048]) [-2] ! no existing xp def ! def: "The formation of a thickening of the neural ectoderm in the head region of the vertebrate embryo which develops into the olfactory region of the nasal cavity." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of olfactory placode [cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0000048])] [Term] id: GO:0030910 ! olfactory placode formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of ZFA:0000048 ! olfactory placode ! seconds spent parsing GO:0030910: 5.22 ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0030913 using "paranodal junction assembly" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0033010]) [-2] ! parse: GO:0030913 using "paranodal junction biosynthesis" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=GO:0033010]) [-2] ! parse: GO:0030913 using "paranodal junction formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=GO:0033010]) [-2] ! parse: GO:0030913 using "paranodal junction formation" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0033010]) [-2] ! parse: GO:0030913 using "paranodal junction formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0033010]) [-2] ! no existing xp def ! def: "Formation of the junction between an axon and the glial cell that forms the myelin sheath. Paranodal junctions form at each paranode, i.e. at the ends of the unmyelinated nodes of Ranvier." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of paranodal junction [cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0033010])] [Term] id: GO:0030913 ! paranodal junction assembly intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of GO:0033010 ! paranodal junction synonym: "paranodal junction anatomical structure formation" EXACT [OBOL:automatic] synonym: "paranodal junction formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0030913: 17.95 ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0030916 using "otic vesicle formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=ZFA:0000051]) [-2] ! parse: GO:0030916 using "otic vesicle formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0000051]) [-2] ! parse: GO:0030916 using "otocyst biosynthesis" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=ZFA:0000051]) [-2] ! parse: GO:0030916 using "otocyst biosynthesis" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=ZFA:0000138]) [-2] ! parse: GO:0030916 using "otocyst biosynthesis" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=ZFA:0000217]) [-2] ! parse: GO:0030916 using "otocyst formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=ZFA:0000051]) [-2] ! parse: GO:0030916 using "otocyst formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=ZFA:0000138]) [-2] ! parse: GO:0030916 using "otocyst formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=ZFA:0000217]) [-2] ! parse: GO:0030916 using "otocyst formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0000051]) [-2] ! parse: GO:0030916 using "otocyst formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0000138]) [-2] ! parse: GO:0030916 using "otocyst formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0000217]) [-2] ! no existing xp def ! def: "The process resulting in the transition of the otic placode into the otic vesicle, a transient embryonic structure formed during development of the vertebrate inner ear." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of inner ear [cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0000217])] [Term] id: GO:0030916 ! otic vesicle formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of ZFA:0000217 ! inner ear synonym: "ear anatomical structure formation" EXACT [OBOL:automatic] synonym: "ear formation" EXACT [OBOL:automatic] synonym: "ear formation of an anatomical structure" EXACT [OBOL:automatic] synonym: "inner ear anatomical structure formation" EXACT [OBOL:automatic] synonym: "inner ear formation" EXACT [OBOL:automatic] synonym: "inner ear formation of an anatomical structure" EXACT [OBOL:automatic] synonym: "otic capsule anatomical structure formation" EXACT [OBOL:automatic] synonym: "otic capsule formation" EXACT [OBOL:automatic] synonym: "otic capsule formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0030916: 19.87 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0030917 using "MHB development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0001187]) [-2] ! parse: GO:0030917 using "isthmic organizer development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(isthmic organizer, anatomy)]) [-18] ! parse: GO:0030917 using "isthmus development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000042]) [-2] ! parse: GO:0030917 using "midbrain-hindbrain boundary development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(- hindbrain boundary, anatomy), OBO_REL:unfolds_in=MA:0000207]) [-22] ! parse: GO:0030917 using "midbrain-hindbrain boundary development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(- hindbrain boundary, anatomy), OBO_REL:unfolds_in=ZFA:0000128]) [-22] ! parse: GO:0030917 using "midbrain-hindbrain orgainizer development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(- hindbrain orgainizer, anatomy), OBO_REL:unfolds_in=MA:0000207]) [-24] ! parse: GO:0030917 using "midbrain-hindbrain orgainizer development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(- hindbrain orgainizer, anatomy), OBO_REL:unfolds_in=ZFA:0000128]) [-24] ! no existing xp def ! def: "The process whose specific outcome is the progression of the midbrain-hindbrain boundary over time, from its formation to the mature structure. The midbrain-hindbrain domain of the embryonic brain is comprised of the mesencephalic vesicle and the first rhombencephalic vesicle at early somitogenesis stages." ! PROPOSED: developmental process that results_in_complete_developmental_of presumptive midbrain hindbrain boundary [cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0001187])] [Term] id: GO:0030917 ! midbrain-hindbrain boundary development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of ZFA:0001187 ! presumptive midbrain hindbrain boundary synonym: "presumptive midbrain hindbrain boundary development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0030917: 37.96 ! parse: GO:0030953 using "astral microtubule organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0000235]) [-2] ! no existing xp def ! def: "A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of astral microtubules, any of the spindle microtubules that radiate in all directions from the spindle poles." ! PROPOSED: cellular component organization and biogenesis that OBO_REL:results_in_structural_change_to astral microtubule [cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0000235])] [Term] id: GO:0030953 ! astral microtubule organization and biogenesis intersection_of: GO:0016043 ! cellular component organization and biogenesis intersection_of: OBO_REL:results_in_structural_change_to GO:0000235 ! astral microtubule synonym: "astral microtubule organization" EXACT [OBOL:automatic] ! seconds spent parsing GO:0030953: 11.29 ! No parse for: GO:0030954 astral microtubule nucleation ! No parse for: GO:0030965 plasma membrane electron transport, NADH to quinone ! No parse for: GO:0030967 ER-nuclear sterol response pathway ! parse: GO:0030994 using "primary cell septum disassembly" => cdef(GO:0022411, [OBO_REL:results_in_breakdown_of=GO:0000936]) [-2] ! no existing xp def ! def: "Dissolution of the primary septum during cell separation." ! PROPOSED: cellular component disassembly that OBO_REL:results_in_breakdown_of primary cell septum [cdef(GO:0022411, [OBO_REL:results_in_breakdown_of=GO:0000936])] [Term] id: GO:0030994 ! primary cell septum disassembly intersection_of: GO:0022411 ! cellular component disassembly intersection_of: OBO_REL:results_in_breakdown_of GO:0000936 ! primary cell septum synonym: "cell structure disassembly of primary cell septum" EXACT [OBOL:automatic] synonym: "cellular component disassembly of primary cell septum" EXACT [OBOL:automatic] synonym: "disassembly of primary cell septum" EXACT [OBOL:automatic] synonym: "primary cell septum cell structure disassembly" EXACT [OBOL:automatic] synonym: "primary cell septum cellular component disassembly" EXACT [OBOL:automatic] ! seconds spent parsing GO:0030994: 20.37 ! No parse for: GO:0030995 cell septum edging catabolic process ! No parse for: GO:0030996 cell cycle arrest in response to nitrogen starvation ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0030999 using "linear element formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=GO:0030998]) [-2] ! parse: GO:0030999 using "linear element formation" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0030998]) [-2] ! parse: GO:0030999 using "linear element formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0030998]) [-2] ! no existing xp def ! def: "The cell cycle process whereby a proteinaceous scaffold, related to the synaptonemal complex, is formed in association with S. pombe chromosomes during meiotic prophase." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of linear element [cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0030998])] [Term] id: GO:0030999 ! linear element formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of GO:0030998 ! linear element synonym: "linear element anatomical structure formation" EXACT [OBOL:automatic] synonym: "linear element formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0030999: 6.23 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0031016 using "pancreas development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000120]) [-2] ! parse: GO:0031016 using "pancreas development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000140]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the pancreas over time, from its formation to the mature structure. The pancreas is an endoderm derived structure that produces precursors of digestive enzymes and blood glucose regulating enzymes." ! PROPOSED: developmental process that results_in_complete_developmental_of pancreas [cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000140])] [Term] id: GO:0031016 ! pancreas development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of ZFA:0000140 ! pancreas ! seconds spent parsing GO:0031016: 5.39 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0031017 using "exocrine pancreas development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0002415]) [-2] ! parse: GO:0031017 using "exocrine pancreas development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0001249]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the exocrine pancreas over time, from its formation to the mature structure. The exocrine pancreas produces and store zymogens of digestive enzymes, such as chymotrypsinogen and trypsinogen in the acinar cells." ! PROPOSED: developmental process that results_in_complete_developmental_of exocrine pancreas [cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0001249])] [Term] id: GO:0031017 ! exocrine pancreas development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of ZFA:0001249 ! exocrine pancreas ! seconds spent parsing GO:0031017: 5.48 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0031018 using "endocrine pancreas development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0001582]) [-2] ! parse: GO:0031018 using "endocrine pancreas development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0001260]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the endocrine pancreas over time, from its formation to the mature structure. The endocrine pancreas is made up of islet cells that produce insulin, glucagon and somatostatin." ! PROPOSED: developmental process that results_in_complete_developmental_of endocrine pancreas [cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0001260])] [Term] id: GO:0031018 ! endocrine pancreas development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of ZFA:0001260 ! endocrine pancreas synonym: "pancreatic islet development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0031018: 5.5 ! parse: GO:0031023 using "microtubule organizing center organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0005815]) [-2] ! no existing xp def ! def: "A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a microtubule organizing center, a structure from which microtubules grow." ! PROPOSED: cellular component organization and biogenesis that OBO_REL:results_in_structural_change_to microtubule organizing center [cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0005815])] [Term] id: GO:0031023 ! microtubule organizing center organization and biogenesis intersection_of: GO:0016043 ! cellular component organization and biogenesis intersection_of: OBO_REL:results_in_structural_change_to GO:0005815 ! microtubule organizing center synonym: "MTOC organization" EXACT [OBOL:automatic] synonym: "MTOC organization and biogenesis" EXACT [OBOL:automatic] synonym: "microtubule organising centre organization" EXACT [OBOL:automatic] synonym: "microtubule organising centre organization and biogenesis" EXACT [OBOL:automatic] synonym: "microtubule organizing center organization" EXACT [OBOL:automatic] ! seconds spent parsing GO:0031023: 20.54 ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0031024 using "interphase microtubule organising center biosynthesis" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=GO:0031021]) [-2] ! parse: GO:0031024 using "interphase microtubule organising center formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=GO:0031021]) [-2] ! parse: GO:0031024 using "interphase microtubule organising center formation" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0031021]) [-2] ! parse: GO:0031024 using "interphase microtubule organising center formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0031021]) [-2] ! parse: GO:0031024 using "interphase microtubule organizing center assembly" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0031021]) [-2] ! parse: GO:0031024 using "interphase microtubule organizing center biogenesis" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0031021]) [-2] ! parse: GO:0031024 using "interphase microtubule organizing center formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=GO:0031021]) [-2] ! parse: GO:0031024 using "interphase microtubule organizing center formation" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0031021]) [-2] ! parse: GO:0031024 using "interphase microtubule organizing center formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0031021]) [-2] ! no existing xp def ! def: "The assembly of gamma-tubulin and other proteins into an interphase microtubule organizing center." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of interphase microtubule organizing center [cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0031021])] [Term] id: GO:0031024 ! interphase microtubule organizing center formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of GO:0031021 ! interphase microtubule organizing center synonym: "iMTOC anatomical structure formation" EXACT [OBOL:automatic] synonym: "iMTOC formation" EXACT [OBOL:automatic] synonym: "iMTOC formation of an anatomical structure" EXACT [OBOL:automatic] synonym: "interphase MTOC anatomical structure formation" EXACT [OBOL:automatic] synonym: "interphase MTOC formation" EXACT [OBOL:automatic] synonym: "interphase MTOC formation of an anatomical structure" EXACT [OBOL:automatic] synonym: "interphase microtubule organising center anatomical structure formation" EXACT [OBOL:automatic] synonym: "interphase microtubule organising center formation of an anatomical structure" EXACT [OBOL:automatic] synonym: "interphase microtubule organizing center anatomical structure formation" EXACT [OBOL:automatic] synonym: "interphase microtubule organizing center formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0031024: 31.52 ! parse: GO:0031025 using "equatorial microtubule organizing center disassembly" => cdef(GO:0022411, [OBO_REL:results_in_breakdown_of=GO:0000923]) [-2] ! no existing xp def ! def: "The process by which the equatorial microtubule organizing center is disassembled at the end of mitosis." ! PROPOSED: cellular component disassembly that OBO_REL:results_in_breakdown_of equatorial microtubule organizing center [cdef(GO:0022411, [OBO_REL:results_in_breakdown_of=GO:0000923])] [Term] id: GO:0031025 ! equatorial microtubule organizing center disassembly intersection_of: GO:0022411 ! cellular component disassembly intersection_of: OBO_REL:results_in_breakdown_of GO:0000923 ! equatorial microtubule organizing center synonym: "EMTOC cell structure disassembly" EXACT [OBOL:automatic] synonym: "EMTOC cellular component disassembly" EXACT [OBOL:automatic] synonym: "EMTOC disassembly" EXACT [OBOL:automatic] synonym: "cell structure disassembly of EMTOC" EXACT [OBOL:automatic] synonym: "cell structure disassembly of equatorial microtubule organising centre" EXACT [OBOL:automatic] synonym: "cell structure disassembly of equatorial microtubule organizing center" EXACT [OBOL:automatic] synonym: "cellular component disassembly of EMTOC" EXACT [OBOL:automatic] synonym: "cellular component disassembly of equatorial microtubule organising centre" EXACT [OBOL:automatic] synonym: "cellular component disassembly of equatorial microtubule organizing center" EXACT [OBOL:automatic] synonym: "disassembly of EMTOC" EXACT [OBOL:automatic] synonym: "disassembly of equatorial microtubule organising centre" EXACT [OBOL:automatic] synonym: "disassembly of equatorial microtubule organizing center" EXACT [OBOL:automatic] synonym: "equatorial microtubule organising centre cell structure disassembly" EXACT [OBOL:automatic] synonym: "equatorial microtubule organising centre cellular component disassembly" EXACT [OBOL:automatic] synonym: "equatorial microtubule organising centre disassembly" EXACT [OBOL:automatic] synonym: "equatorial microtubule organizing center cell structure disassembly" EXACT [OBOL:automatic] synonym: "equatorial microtubule organizing center cellular component disassembly" EXACT [OBOL:automatic] ! seconds spent parsing GO:0031025: 9.98 ! No parse for: GO:0031032 actomyosin structure organization and biogenesis ! No parse for: GO:0031033 myosin filament assembly or disassembly ! parse: GO:0031034 using "myosin filament assembly" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0032982]) [-2] ! no existing xp def ! def: "The aggregation and bonding together of a filament composed of myosin molecules." ! PROPOSED: cellular component assembly that OBO_REL:results_in_creation_of myosin filament [cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0032982])] [Term] id: GO:0031034 ! myosin filament assembly intersection_of: GO:0022607 ! cellular component assembly intersection_of: OBO_REL:results_in_creation_of GO:0032982 ! myosin filament synonym: "assembly and maintenance of myosin filament" EXACT [OBOL:automatic] synonym: "assembly and maintenance of myosin thick filament" EXACT [OBOL:automatic] synonym: "assembly and maintenance of thick filament" EXACT [OBOL:automatic] synonym: "assembly of myosin filament" EXACT [OBOL:automatic] synonym: "assembly of myosin thick filament" EXACT [OBOL:automatic] synonym: "assembly of thick filament" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of myosin filament" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of myosin thick filament" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of thick filament" EXACT [OBOL:automatic] synonym: "biogenesis of myosin filament" EXACT [OBOL:automatic] synonym: "biogenesis of myosin thick filament" EXACT [OBOL:automatic] synonym: "biogenesis of thick filament" EXACT [OBOL:automatic] synonym: "cell structure assembly of myosin filament" EXACT [OBOL:automatic] synonym: "cell structure assembly of myosin thick filament" EXACT [OBOL:automatic] synonym: "cell structure assembly of thick filament" EXACT [OBOL:automatic] synonym: "cellular component assembly of myosin filament" EXACT [OBOL:automatic] synonym: "cellular component assembly of myosin thick filament" EXACT [OBOL:automatic] synonym: "cellular component assembly of thick filament" EXACT [OBOL:automatic] synonym: "complex assembly of myosin filament" EXACT [OBOL:automatic] synonym: "complex assembly of myosin thick filament" EXACT [OBOL:automatic] synonym: "complex assembly of thick filament" EXACT [OBOL:automatic] synonym: "formation of myosin filament" EXACT [OBOL:automatic] synonym: "formation of myosin thick filament" EXACT [OBOL:automatic] synonym: "formation of thick filament" EXACT [OBOL:automatic] synonym: "myosin filament assembly and maintenance" EXACT [OBOL:automatic] synonym: "myosin filament biogenesis" EXACT [OBOL:automatic] synonym: "myosin filament biogenesis and assembly" EXACT [OBOL:automatic] synonym: "myosin filament cell structure assembly" EXACT [OBOL:automatic] synonym: "myosin filament cellular component assembly" EXACT [OBOL:automatic] synonym: "myosin filament complex assembly" EXACT [OBOL:automatic] synonym: "myosin filament formation" EXACT [OBOL:automatic] synonym: "myosin thick filament assembly" EXACT [OBOL:automatic] synonym: "myosin thick filament assembly and maintenance" EXACT [OBOL:automatic] synonym: "myosin thick filament biogenesis" EXACT [OBOL:automatic] synonym: "myosin thick filament biogenesis and assembly" EXACT [OBOL:automatic] synonym: "myosin thick filament cell structure assembly" EXACT [OBOL:automatic] synonym: "myosin thick filament cellular component assembly" EXACT [OBOL:automatic] synonym: "myosin thick filament complex assembly" EXACT [OBOL:automatic] synonym: "myosin thick filament formation" EXACT [OBOL:automatic] synonym: "thick filament assembly" EXACT [OBOL:automatic] synonym: "thick filament assembly and maintenance" EXACT [OBOL:automatic] synonym: "thick filament biogenesis" EXACT [OBOL:automatic] synonym: "thick filament biogenesis and assembly" EXACT [OBOL:automatic] synonym: "thick filament cell structure assembly" EXACT [OBOL:automatic] synonym: "thick filament cellular component assembly" EXACT [OBOL:automatic] synonym: "thick filament complex assembly" EXACT [OBOL:automatic] synonym: "thick filament formation" EXACT [OBOL:automatic] def: "The aggregation and bonding together of a set of macromolecules to form a myosin filament" [OBOL:automatic] ! seconds spent parsing GO:0031034: 9.73 ! parse: GO:0031035 using "myosin filament disassembly" => cdef(GO:0022411, [OBO_REL:results_in_breakdown_of=GO:0032982]) [-2] ! no existing xp def ! def: "The disassembly of a filament composed of myosin molecules." ! PROPOSED: cellular component disassembly that OBO_REL:results_in_breakdown_of myosin filament [cdef(GO:0022411, [OBO_REL:results_in_breakdown_of=GO:0032982])] [Term] id: GO:0031035 ! myosin filament disassembly intersection_of: GO:0022411 ! cellular component disassembly intersection_of: OBO_REL:results_in_breakdown_of GO:0032982 ! myosin filament synonym: "cell structure disassembly of myosin filament" EXACT [OBOL:automatic] synonym: "cell structure disassembly of myosin thick filament" EXACT [OBOL:automatic] synonym: "cell structure disassembly of thick filament" EXACT [OBOL:automatic] synonym: "cellular component disassembly of myosin filament" EXACT [OBOL:automatic] synonym: "cellular component disassembly of myosin thick filament" EXACT [OBOL:automatic] synonym: "cellular component disassembly of thick filament" EXACT [OBOL:automatic] synonym: "disassembly of myosin filament" EXACT [OBOL:automatic] synonym: "disassembly of myosin thick filament" EXACT [OBOL:automatic] synonym: "disassembly of thick filament" EXACT [OBOL:automatic] synonym: "myosin filament cell structure disassembly" EXACT [OBOL:automatic] synonym: "myosin filament cellular component disassembly" EXACT [OBOL:automatic] synonym: "myosin thick filament cell structure disassembly" EXACT [OBOL:automatic] synonym: "myosin thick filament cellular component disassembly" EXACT [OBOL:automatic] synonym: "myosin thick filament disassembly" EXACT [OBOL:automatic] synonym: "thick filament cell structure disassembly" EXACT [OBOL:automatic] synonym: "thick filament cellular component disassembly" EXACT [OBOL:automatic] synonym: "thick filament disassembly" EXACT [OBOL:automatic] ! seconds spent parsing GO:0031035: 9.7 ! parse: GO:0031046 using "spindle pole body duplication in cytoplasm" => cdef(GO:0030474, [OBO_REL:unfolds_in=GO:0005737]) [-2] ! no existing xp def ! def: "Construction of a new spindle pole body adjacent to the existing spindle pole body exterior to the outer nuclear envelope." ! PROPOSED: spindle pole body duplication that OBO_REL:unfolds_in cytoplasm [cdef(GO:0030474, [OBO_REL:unfolds_in=GO:0005737])] [Term] id: GO:0031046 ! spindle pole body duplication in cytoplasm intersection_of: GO:0030474 ! spindle pole body duplication intersection_of: OBO_REL:unfolds_in GO:0005737 ! cytoplasm synonym: "spindle pole body assembly in cytoplasm" EXACT [OBOL:automatic] synonym: "spindle pole body assembly through the cytoplasm" EXACT [OBOL:automatic] synonym: "spindle pole body biogenesis in cytoplasm" EXACT [OBOL:automatic] synonym: "spindle pole body biogenesis in the cytoplasm" EXACT [OBOL:automatic] synonym: "spindle pole body biogenesis through the cytoplasm" EXACT [OBOL:automatic] synonym: "spindle pole body biosynthesis in cytoplasm" EXACT [OBOL:automatic] synonym: "spindle pole body biosynthesis in the cytoplasm" EXACT [OBOL:automatic] synonym: "spindle pole body biosynthesis through the cytoplasm" EXACT [OBOL:automatic] synonym: "spindle pole body duplication (sensu Fungi) in cytoplasm" EXACT [OBOL:automatic] synonym: "spindle pole body duplication (sensu Fungi) in the cytoplasm" EXACT [OBOL:automatic] synonym: "spindle pole body duplication (sensu Fungi) through the cytoplasm" EXACT [OBOL:automatic] synonym: "spindle pole body formation in cytoplasm" EXACT [OBOL:automatic] synonym: "spindle pole body formation in the cytoplasm" EXACT [OBOL:automatic] synonym: "spindle pole body formation through the cytoplasm" EXACT [OBOL:automatic] synonym: "spindle pole body replication in cytoplasm" EXACT [OBOL:automatic] synonym: "spindle pole body replication in the cytoplasm" EXACT [OBOL:automatic] synonym: "spindle pole body replication through the cytoplasm" EXACT [OBOL:automatic] ! seconds spent parsing GO:0031046: 44.06 ! No parse for: GO:0031052 chromosome breakage ! No parse for: GO:0031053 primary microRNA processing ! No parse for: GO:0031055 chromatin remodeling at centromere ! parse: GO:0031069 using "hair follicle morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00004894, OBO_REL:unfolds_in=FBbt:00005182]) [-3] ! parse: GO:0031069 using "hair follicle morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000154]) [-2] ! parse: GO:0031069 using "hair follicle morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=cdef(FBbt:00004894, [OBO_REL:part_of=FBbt:00005182])]) [-3] ! no existing xp def ! def: "The process by which the anatomical structures of the hair follicle are generated and organized." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of hair follicle [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000154])] [Term] id: GO:0031069 ! hair follicle morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of MA:0000154 ! hair follicle ! seconds spent parsing GO:0031069: 11.89 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0031076 using "embryonic camera-type eye development" => cdef(GO:0001654, [OBO_REL:results_in_developmental_progression_of=anon(embryonic camera-type, anatomy)]) [-22] ! parse: GO:0031076 using "embryonic camera-type eye development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(embryonic camera-type eye, anatomy)]) [-26] ! parse: GO:0031076 using "embryonic camera-type eye development" => cdef(GO:0043010, [OBO_REL:part_of=GO:0009790]) [-2] ! parse: GO:0031076 using "embryonic camera-type eye development" => cdef(GO:0043010, [OBO_REL:results_in_developmental_progression_of=anon(embryonic, anatomy)]) [-10] ! parse: GO:0031076 using "embryonic camera-type eye development" => cdef(cdef(GO:0001654, [OBO_REL:results_in_developmental_progression_of=anon(camera-type, anatomy)]), [OBO_REL:part_of=GO:0009790]) [-13] ! parse: GO:0031076 using "embryonic camera-type eye development" => cdef(cdef(GO:0032502, [results_in_complete_developmental_of=anon(camera-type eye, anatomy)]), [OBO_REL:part_of=GO:0009790]) [-17] ! parse: GO:0031076 using "embryonic eye development" => cdef(GO:0001654, [OBO_REL:part_of=GO:0009790]) [-2] ! parse: GO:0031076 using "embryonic eye development" => cdef(GO:0001654, [OBO_REL:results_in_developmental_progression_of=anon(embryonic, anatomy)]) [-10] ! parse: GO:0031076 using "embryonic eye development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(embryonic eye, anatomy)]) [-14] ! parse: GO:0031076 using "embryonic eye development" => cdef(cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00004508]), [OBO_REL:part_of=GO:0009790]) [-3] ! parse: GO:0031076 using "embryonic eye development" => cdef(cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000261]), [OBO_REL:part_of=GO:0009790]) [-3] ! parse: GO:0031076 using "embryonic eye development" => cdef(cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000107]), [OBO_REL:part_of=GO:0009790]) [-3] ! parse: GO:0031076 using "embryonic eye development (sensu Actinopterygii)" => cdef(GO:0043010, [OBO_REL:part_of=GO:0009790]) [-2] ! parse: GO:0031076 using "embryonic eye development (sensu Actinopterygii)" => cdef(GO:0043010, [OBO_REL:results_in_developmental_progression_of=anon(embryonic, anatomy)]) [-10] ! no existing xp def ! def: "The process occuring during the embryonic phase whose specific outcome is the progression of the eye over time, from its formation to the mature structure." ! PROPOSED: camera-type eye development that OBO_REL:part_of embryonic development [cdef(GO:0043010, [OBO_REL:part_of=GO:0009790])] [Term] id: GO:0031076 ! embryonic camera-type eye development intersection_of: GO:0043010 ! camera-type eye development intersection_of: OBO_REL:part_of GO:0009790 ! embryonic development synonym: "embryogenesis, camera-type eye development" EXACT [OBOL:automatic] synonym: "embryogenesis, eye development (sensu Actinopterygii)" EXACT [OBOL:automatic] synonym: "embryogenesis, eye development (sensu Mammalia)" EXACT [OBOL:automatic] synonym: "embryogenesis, eye development (sensu Vertebrata)" EXACT [OBOL:automatic] synonym: "embryonal development, camera-type eye development" EXACT [OBOL:automatic] synonym: "embryonal development, eye development (sensu Actinopterygii)" EXACT [OBOL:automatic] synonym: "embryonal development, eye development (sensu Mammalia)" EXACT [OBOL:automatic] synonym: "embryonal development, eye development (sensu Vertebrata)" EXACT [OBOL:automatic] synonym: "embryonic development, camera-type eye development" EXACT [OBOL:automatic] synonym: "embryonic development, eye development (sensu Actinopterygii)" EXACT [OBOL:automatic] synonym: "embryonic development, eye development (sensu Mammalia)" EXACT [OBOL:automatic] synonym: "embryonic development, eye development (sensu Vertebrata)" EXACT [OBOL:automatic] synonym: "embryonic eye development (sensu Mammalia)" EXACT [OBOL:automatic] synonym: "embryonic eye development (sensu Vertebrata)" EXACT [OBOL:automatic] synonym: "eye development (sensu Actinopterygii) during embryogenesis" EXACT [OBOL:automatic] synonym: "eye development (sensu Actinopterygii) during embryonal development" EXACT [OBOL:automatic] synonym: "eye development (sensu Actinopterygii) during embryonic development" EXACT [OBOL:automatic] synonym: "eye development (sensu Actinopterygii) involved in embryogenesis" EXACT [OBOL:automatic] synonym: "eye development (sensu Actinopterygii) involved in embryonal development" EXACT [OBOL:automatic] synonym: "eye development (sensu Actinopterygii) involved in embryonic development" EXACT [OBOL:automatic] synonym: "eye development (sensu Actinopterygii) of embryogenesis" EXACT [OBOL:automatic] synonym: "eye development (sensu Actinopterygii) of embryonal development" EXACT [OBOL:automatic] synonym: "eye development (sensu Actinopterygii) of embryonic development" EXACT [OBOL:automatic] synonym: "eye development (sensu Actinopterygii) with embryogenesis" EXACT [OBOL:automatic] synonym: "eye development (sensu Actinopterygii) with embryonal development" EXACT [OBOL:automatic] synonym: "eye development (sensu Actinopterygii) with embryonic development" EXACT [OBOL:automatic] synonym: "eye development (sensu Mammalia) during embryogenesis" EXACT [OBOL:automatic] synonym: "eye development (sensu Mammalia) during embryonal development" EXACT [OBOL:automatic] synonym: "eye development (sensu Mammalia) during embryonic development" EXACT [OBOL:automatic] synonym: "eye development (sensu Mammalia) involved in embryogenesis" EXACT [OBOL:automatic] synonym: "eye development (sensu Mammalia) involved in embryonal development" EXACT [OBOL:automatic] synonym: "eye development (sensu Mammalia) involved in embryonic development" EXACT [OBOL:automatic] synonym: "eye development (sensu Mammalia) of embryogenesis" EXACT [OBOL:automatic] synonym: "eye development (sensu Mammalia) of embryonal development" EXACT [OBOL:automatic] synonym: "eye development (sensu Mammalia) of embryonic development" EXACT [OBOL:automatic] synonym: "eye development (sensu Mammalia) with embryogenesis" EXACT [OBOL:automatic] synonym: "eye development (sensu Mammalia) with embryonal development" EXACT [OBOL:automatic] synonym: "eye development (sensu Mammalia) with embryonic development" EXACT [OBOL:automatic] synonym: "eye development (sensu Vertebrata) during embryogenesis" EXACT [OBOL:automatic] synonym: "eye development (sensu Vertebrata) during embryonal development" EXACT [OBOL:automatic] synonym: "eye development (sensu Vertebrata) during embryonic development" EXACT [OBOL:automatic] synonym: "eye development (sensu Vertebrata) involved in embryogenesis" EXACT [OBOL:automatic] synonym: "eye development (sensu Vertebrata) involved in embryonal development" EXACT [OBOL:automatic] synonym: "eye development (sensu Vertebrata) involved in embryonic development" EXACT [OBOL:automatic] synonym: "eye development (sensu Vertebrata) of embryogenesis" EXACT [OBOL:automatic] synonym: "eye development (sensu Vertebrata) of embryonal development" EXACT [OBOL:automatic] synonym: "eye development (sensu Vertebrata) of embryonic development" EXACT [OBOL:automatic] synonym: "eye development (sensu Vertebrata) with embryogenesis" EXACT [OBOL:automatic] synonym: "eye development (sensu Vertebrata) with embryonal development" EXACT [OBOL:automatic] synonym: "eye development (sensu Vertebrata) with embryonic development" EXACT [OBOL:automatic] def: "A camera-type eye development that is part of a embryogenesis" [OBOL:automatic] ! seconds spent parsing GO:0031076: 25.15 ! No parse for: GO:0031081 nuclear pore distribution ! No parse for: GO:0031098 stress-activated protein kinase signaling pathway ! parse: GO:0031100 using "organ regeneration" => cdef(GO:0031099, [OBO_REL:results_in_developmental_progression_of=PO:0009008]) [-2] ! parse: GO:0031100 using "organ regeneration" => cdef(GO:0031099, [OBO_REL:results_in_developmental_progression_of=ZFA:0000496]) [-2] ! no existing xp def ! def: "The regrowth of a lost or destroyed organ." ! PROPOSED: regeneration that OBO_REL:results_in_developmental_progression_of compound organ [cdef(GO:0031099, [OBO_REL:results_in_developmental_progression_of=ZFA:0000496])] [Term] id: GO:0031100 ! organ regeneration intersection_of: GO:0031099 ! regeneration intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0000496 ! compound organ synonym: "compound organ regeneration" EXACT [OBOL:automatic] ! seconds spent parsing GO:0031100: 10.25 ! parse: GO:0031102 using "neurite regeneration" => cdef(GO:0031099, [OBO_REL:results_in_developmental_progression_of=FBbt:00005113]) [-2] ! no existing xp def ! def: "The regrowth of neuronal processes such as axons or dendrites following their loss or damage." ! PROPOSED: regeneration that OBO_REL:results_in_developmental_progression_of neurite [cdef(GO:0031099, [OBO_REL:results_in_developmental_progression_of=FBbt:00005113])] [Term] id: GO:0031102 ! neurite regeneration intersection_of: GO:0031099 ! regeneration intersection_of: OBO_REL:results_in_developmental_progression_of FBbt:00005113 ! neurite ! seconds spent parsing GO:0031102: 5.13 ! parse: GO:0031103 using "axon regeneration" => cdef(GO:0031099, [OBO_REL:results_in_developmental_progression_of=GO:0030424]) [-2] ! no existing xp def ! def: "The regrowth of axons following their loss or damage." ! PROPOSED: regeneration that OBO_REL:results_in_developmental_progression_of axon [cdef(GO:0031099, [OBO_REL:results_in_developmental_progression_of=GO:0030424])] [Term] id: GO:0031103 ! axon regeneration intersection_of: GO:0031099 ! regeneration intersection_of: OBO_REL:results_in_developmental_progression_of GO:0030424 ! axon ! seconds spent parsing GO:0031103: 6.1 ! parse: GO:0031104 using "dendrite regeneration" => cdef(GO:0031099, [OBO_REL:results_in_developmental_progression_of=FBbt:00005110]) [-2] ! parse: GO:0031104 using "dendrite regeneration" => cdef(GO:0031099, [OBO_REL:results_in_developmental_progression_of=GO:0030425]) [-2] ! no existing xp def ! def: "The regrowth of dendrites following their loss or damage." ! PROPOSED: regeneration that OBO_REL:results_in_developmental_progression_of dendrite [cdef(GO:0031099, [OBO_REL:results_in_developmental_progression_of=GO:0030425])] [Term] id: GO:0031104 ! dendrite regeneration intersection_of: GO:0031099 ! regeneration intersection_of: OBO_REL:results_in_developmental_progression_of GO:0030425 ! dendrite ! seconds spent parsing GO:0031104: 7.15 ! parse: GO:0031106 using "septin ring organization" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0005940]) [-2] ! no existing xp def ! def: "Control of the formation, spatial distribution, and breakdown of the septin ring." ! PROPOSED: cellular component organization and biogenesis that OBO_REL:results_in_structural_change_to septin ring [cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0005940])] [Term] id: GO:0031106 ! septin ring organization intersection_of: GO:0016043 ! cellular component organization and biogenesis intersection_of: OBO_REL:results_in_structural_change_to GO:0005940 ! septin ring synonym: "septin ring organization and biogenesis" EXACT [OBOL:automatic] ! seconds spent parsing GO:0031106: 11.15 ! parse: GO:0031107 using "septin ring disassembly" => cdef(GO:0022411, [OBO_REL:results_in_breakdown_of=GO:0005940]) [-2] ! no existing xp def ! def: "The controlled breakdown of a septin ring." ! PROPOSED: cellular component disassembly that OBO_REL:results_in_breakdown_of septin ring [cdef(GO:0022411, [OBO_REL:results_in_breakdown_of=GO:0005940])] [Term] id: GO:0031107 ! septin ring disassembly intersection_of: GO:0022411 ! cellular component disassembly intersection_of: OBO_REL:results_in_breakdown_of GO:0005940 ! septin ring synonym: "cell structure disassembly of septin ring" EXACT [OBOL:automatic] synonym: "cellular component disassembly of septin ring" EXACT [OBOL:automatic] synonym: "disassembly of septin ring" EXACT [OBOL:automatic] synonym: "septin ring cell structure disassembly" EXACT [OBOL:automatic] synonym: "septin ring cellular component disassembly" EXACT [OBOL:automatic] ! seconds spent parsing GO:0031107: 5.59 ! No parse for: GO:0031109 microtubule polymerization or depolymerization ! Already have xp for: GO:0031117 positive regulation of microtubule depolymerization ! CURRENT : biological regulation that OBO_REL:positively_regulates microtubule depolymerization and regulates microtubule depolymerization [cdef(GO:0065007, [OBO_REL:positively_regulates=GO:0007019, regulates=GO:0007019])] ! No parse for: GO:0031119 tRNA pseudouridine synthesis ! parse: GO:0031122 using "cytoplasmic microtubule organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0005881]) [-2] ! no existing xp def ! def: "A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of structures formed of microtubules and associated proteins in the cytoplasm of a cell." ! PROPOSED: cellular component organization and biogenesis that OBO_REL:results_in_structural_change_to cytoplasmic microtubule [cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0005881])] [Term] id: GO:0031122 ! cytoplasmic microtubule organization and biogenesis intersection_of: GO:0016043 ! cellular component organization and biogenesis intersection_of: OBO_REL:results_in_structural_change_to GO:0005881 ! cytoplasmic microtubule synonym: "cytoplasmic microtubule organization" EXACT [OBOL:automatic] ! seconds spent parsing GO:0031122: 11.24 ! No parse for: GO:0031134 sister chromatid biorientation ! No parse for: GO:0031144 proteasome localization ! Already have xp for: GO:0031145 anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process ! CURRENT : proteasomal ubiquitin-dependent protein catabolic process that OBO_REL:dependent_on anaphase-promoting complex [cdef(GO:0043161, [OBO_REL:dependent_on=GO:0005680])] ! Already have xp for: GO:0031149 stalk cell differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of interfollicle cell [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000674])] ! No parse for: GO:0031150 stalk development (sensu Dictyosteliida) ! Already have xp for: GO:0031154 culmination during fruiting body development ! CURRENT : culmination that OBO_REL:part_of fruiting body development [cdef(obol:culmination, [OBO_REL:part_of=GO:0030582])] ! No relation defined: results_in_complete_developmental_of ! parse: GO:0031175 using "neurite development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00005113]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the neurite over time, from its formation to the mature structure. The neurite is any process extending from a neural cell, such as axons or dendrites." ! PROPOSED: developmental process that results_in_complete_developmental_of neurite [cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00005113])] [Term] id: GO:0031175 ! neurite development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of FBbt:00005113 ! neurite ! seconds spent parsing GO:0031175: 4.71 ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0031247 using "actin rod formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=GO:0031002]) [-2] ! parse: GO:0031247 using "actin rod formation" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0031002]) [-2] ! parse: GO:0031247 using "actin rod formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0031002]) [-2] ! no existing xp def ! def: "The assembly of actin rods, a cellular structure consisting of parallel, hexagonally arranged actin tubules." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of actin rod [cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0031002])] [Term] id: GO:0031247 ! actin rod formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of GO:0031002 ! actin rod synonym: "actin rod anatomical structure formation" EXACT [OBOL:automatic] synonym: "actin rod formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0031247: 6.23 ! parse: GO:0031268 using "pseudopodium organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0031143]) [-2] ! no existing xp def ! def: "A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a pseudopodium, a temporary protrusion or retractile process of a cell, associated with cellular movement." ! PROPOSED: cellular component organization and biogenesis that OBO_REL:results_in_structural_change_to pseudopodium [cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0031143])] [Term] id: GO:0031268 ! pseudopodium organization and biogenesis intersection_of: GO:0016043 ! cellular component organization and biogenesis intersection_of: OBO_REL:results_in_structural_change_to GO:0031143 ! pseudopodium synonym: "pseudopod organization" EXACT [OBOL:automatic] synonym: "pseudopod organization and biogenesis" EXACT [OBOL:automatic] synonym: "pseudopodium organization" EXACT [OBOL:automatic] ! seconds spent parsing GO:0031268: 11.18 ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0031269 using "pseudopodium formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=GO:0031143]) [-2] ! parse: GO:0031269 using "pseudopodium formation" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0031143]) [-2] ! parse: GO:0031269 using "pseudopodium formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0031143]) [-2] ! no existing xp def ! def: "The assembly of a pseudopodium by rearrangement of the actin cytoskeleton and overlying membrane." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of pseudopodium [cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0031143])] [Term] id: GO:0031269 ! pseudopodium formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of GO:0031143 ! pseudopodium synonym: "pseudopod anatomical structure formation" EXACT [OBOL:automatic] synonym: "pseudopod formation" EXACT [OBOL:automatic] synonym: "pseudopod formation of an anatomical structure" EXACT [OBOL:automatic] synonym: "pseudopodium anatomical structure formation" EXACT [OBOL:automatic] synonym: "pseudopodium formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0031269: 16.68 ! No parse for: GO:0031270 pseudopodium retraction ! No parse for: GO:0031288 fruiting body morphogenesis (sensu Dictyosteliida) ! Already have xp for: GO:0031290 retinal ganglion cell axon guidance ! CURRENT : axon guidance that OBO_REL:results_in_movement_of retinal ganglion cell [cdef(GO:0007411, [OBO_REL:results_in_movement_of=CL:0000740])] ! No parse for: GO:0031293 membrane protein intracellular domain proteolysis ! Already have xp for: GO:0031294 lymphocyte costimulation ! CURRENT : biological_process that OBO_REL:costimulation_of lymphocyte [cdef(GO:0008150, [OBO_REL:costimulation_of=CL:0000542])] ! Already have xp for: GO:0031295 T cell costimulation ! CURRENT : biological_process that OBO_REL:costimulation_of T cell [cdef(GO:0008150, [OBO_REL:costimulation_of=CL:0000084])] ! Already have xp for: GO:0031296 B cell costimulation ! CURRENT : biological_process that OBO_REL:costimulation_of B cell [cdef(GO:0008150, [OBO_REL:costimulation_of=CL:0000236])] ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0031321 using "prospore formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=GO:0042763]) [-2] ! parse: GO:0031321 using "prospore formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=GO:0042764]) [-2] ! parse: GO:0031321 using "prospore formation" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0042763]) [-2] ! parse: GO:0031321 using "prospore formation" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0042764]) [-2] ! parse: GO:0031321 using "prospore formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0042763]) [-2] ! parse: GO:0031321 using "prospore formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0042764]) [-2] ! no existing xp def ! def: "During fungal sporulation, the process by which each haploid nucleus becomes encapsulated by a double membrane." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of prospore [cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0042764])] [Term] id: GO:0031321 ! prospore formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of GO:0042764 ! prospore synonym: "forespore (sensu Fungi) anatomical structure formation" EXACT [OBOL:automatic] synonym: "forespore (sensu Fungi) formation" EXACT [OBOL:automatic] synonym: "forespore (sensu Fungi) formation of an anatomical structure" EXACT [OBOL:automatic] synonym: "prospore anatomical structure formation" EXACT [OBOL:automatic] synonym: "prospore formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0031321: 14.59 ! No parse for: GO:0031322 prospore-specific spindle pole body modification ! parse: GO:0031382 using "mating projection biogenesis" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0005937]) [-2] ! no existing xp def ! def: "Formation of a projection by unicellular fungi in response to mating pheromone." ! PROPOSED: cellular component assembly that OBO_REL:results_in_creation_of mating projection [cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0005937])] [Term] id: GO:0031382 ! mating projection biogenesis intersection_of: GO:0022607 ! cellular component assembly intersection_of: OBO_REL:results_in_creation_of GO:0005937 ! mating projection synonym: "assembly and maintenance of mating projection" EXACT [OBOL:automatic] synonym: "assembly of mating projection" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of mating projection" EXACT [OBOL:automatic] synonym: "biogenesis of mating projection" EXACT [OBOL:automatic] synonym: "cell structure assembly of mating projection" EXACT [OBOL:automatic] synonym: "cellular component assembly of mating projection" EXACT [OBOL:automatic] synonym: "complex assembly of mating projection" EXACT [OBOL:automatic] synonym: "formation of mating projection" EXACT [OBOL:automatic] synonym: "mating projection assembly" EXACT [OBOL:automatic] synonym: "mating projection assembly and maintenance" EXACT [OBOL:automatic] synonym: "mating projection biogenesis and assembly" EXACT [OBOL:automatic] synonym: "mating projection cell structure assembly" EXACT [OBOL:automatic] synonym: "mating projection cellular component assembly" EXACT [OBOL:automatic] synonym: "mating projection complex assembly" EXACT [OBOL:automatic] synonym: "mating projection formation" EXACT [OBOL:automatic] def: "The aggregation and bonding together of a set of macromolecules to form a mating projection" [OBOL:automatic] ! seconds spent parsing GO:0031382: 5.89 ! No parse for: GO:0031388 organic acid phosphorylation ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0031412 using "gas vesicle biosynthesis" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=GO:0031411]) [-2] ! parse: GO:0031412 using "gas vesicle formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=GO:0031411]) [-2] ! parse: GO:0031412 using "gas vesicle formation" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0031411]) [-2] ! parse: GO:0031412 using "gas vesicle formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0031411]) [-2] ! parse: GO:0031412 using "gas vesicle organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0031411]) [-2] ! no existing xp def ! def: "A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a gas vesicle." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of gas vesicle [cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0031411])] [Term] id: GO:0031412 ! gas vesicle organization and biogenesis intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of GO:0031411 ! gas vesicle synonym: "gas vesicle anatomical structure formation" EXACT [OBOL:automatic] synonym: "gas vesicle formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0031412: 23.8 ! No parse for: GO:0031425 chloroplast RNA processing ! No parse for: GO:0031468 nuclear envelope reassembly ! parse: GO:0031497 using "chromatin assembly" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0000785]) [-2] ! no existing xp def ! def: "The assembly of DNA, histone proteins, and other associated proteins into chromatin structure, beginning with the formation of the basic unit, the nucleosome, followed by organization of the nucleosomes into higher order structures, ultimately giving rise to a complex organization of specific domains within the nucleus." ! PROPOSED: cellular component assembly that OBO_REL:results_in_creation_of chromatin [cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0000785])] [Term] id: GO:0031497 ! chromatin assembly intersection_of: GO:0022607 ! cellular component assembly intersection_of: OBO_REL:results_in_creation_of GO:0000785 ! chromatin synonym: "assembly and maintenance of chromatin" EXACT [OBOL:automatic] synonym: "assembly and maintenance of chromosome scaffold" EXACT [OBOL:automatic] synonym: "assembly of chromatin" EXACT [OBOL:automatic] synonym: "assembly of chromosome scaffold" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of chromatin" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of chromosome scaffold" EXACT [OBOL:automatic] synonym: "biogenesis of chromatin" EXACT [OBOL:automatic] synonym: "biogenesis of chromosome scaffold" EXACT [OBOL:automatic] synonym: "cell structure assembly of chromatin" EXACT [OBOL:automatic] synonym: "cell structure assembly of chromosome scaffold" EXACT [OBOL:automatic] synonym: "cellular component assembly of chromatin" EXACT [OBOL:automatic] synonym: "cellular component assembly of chromosome scaffold" EXACT [OBOL:automatic] synonym: "chromatin assembly and maintenance" EXACT [OBOL:automatic] synonym: "chromatin biogenesis" EXACT [OBOL:automatic] synonym: "chromatin biogenesis and assembly" EXACT [OBOL:automatic] synonym: "chromatin cell structure assembly" EXACT [OBOL:automatic] synonym: "chromatin cellular component assembly" EXACT [OBOL:automatic] synonym: "chromatin complex assembly" EXACT [OBOL:automatic] synonym: "chromatin formation" EXACT [OBOL:automatic] synonym: "chromosome scaffold assembly" EXACT [OBOL:automatic] synonym: "chromosome scaffold assembly and maintenance" EXACT [OBOL:automatic] synonym: "chromosome scaffold biogenesis" EXACT [OBOL:automatic] synonym: "chromosome scaffold biogenesis and assembly" EXACT [OBOL:automatic] synonym: "chromosome scaffold cell structure assembly" EXACT [OBOL:automatic] synonym: "chromosome scaffold cellular component assembly" EXACT [OBOL:automatic] synonym: "chromosome scaffold complex assembly" EXACT [OBOL:automatic] synonym: "chromosome scaffold formation" EXACT [OBOL:automatic] synonym: "complex assembly of chromatin" EXACT [OBOL:automatic] synonym: "complex assembly of chromosome scaffold" EXACT [OBOL:automatic] synonym: "formation of chromatin" EXACT [OBOL:automatic] synonym: "formation of chromosome scaffold" EXACT [OBOL:automatic] def: "The aggregation and bonding together of a set of macromolecules to form a chromatin" [OBOL:automatic] ! seconds spent parsing GO:0031497: 5.61 ! parse: GO:0031498 using "chromatin disassembly" => cdef(GO:0022411, [OBO_REL:results_in_breakdown_of=GO:0000785]) [-2] ! no existing xp def ! def: "The disassembly of chromatin from a higher order structure into its simpler subcomponents, DNA, histones, and other proteins." ! PROPOSED: cellular component disassembly that OBO_REL:results_in_breakdown_of chromatin [cdef(GO:0022411, [OBO_REL:results_in_breakdown_of=GO:0000785])] [Term] id: GO:0031498 ! chromatin disassembly intersection_of: GO:0022411 ! cellular component disassembly intersection_of: OBO_REL:results_in_breakdown_of GO:0000785 ! chromatin synonym: "cell structure disassembly of chromatin" EXACT [OBOL:automatic] synonym: "cell structure disassembly of chromosome scaffold" EXACT [OBOL:automatic] synonym: "cellular component disassembly of chromatin" EXACT [OBOL:automatic] synonym: "cellular component disassembly of chromosome scaffold" EXACT [OBOL:automatic] synonym: "chromatin cell structure disassembly" EXACT [OBOL:automatic] synonym: "chromatin cellular component disassembly" EXACT [OBOL:automatic] synonym: "chromosome scaffold cell structure disassembly" EXACT [OBOL:automatic] synonym: "chromosome scaffold cellular component disassembly" EXACT [OBOL:automatic] synonym: "chromosome scaffold disassembly" EXACT [OBOL:automatic] synonym: "disassembly of chromatin" EXACT [OBOL:automatic] synonym: "disassembly of chromosome scaffold" EXACT [OBOL:automatic] ! seconds spent parsing GO:0031498: 5.57 ! parse: GO:0031503 using "protein complex localization" => cdef(GO:0051179, [OBO_REL:results_in_localization_of=GO:0043234]) [-2] ! no existing xp def ! def: "The processes by which a protein complex is transported to, or maintained in, a specific location." ! PROPOSED: localization that OBO_REL:results_in_localization_of protein complex [cdef(GO:0051179, [OBO_REL:results_in_localization_of=GO:0043234])] [Term] id: GO:0031503 ! protein complex localization intersection_of: GO:0051179 ! localization intersection_of: OBO_REL:results_in_localization_of GO:0043234 ! protein complex ! seconds spent parsing GO:0031503: 14.77 ! parse: GO:0031504 using "peptidoglycan-based cell wall organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0009274]) [-2] ! no existing xp def ! def: "A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the peptidoglycan-based cell wall; as in, but not restricted to, the taxon Bacteria (Bacteria, ncbi_taxonomy_id:2)." ! PROPOSED: cellular component organization and biogenesis that OBO_REL:results_in_structural_change_to peptidoglycan-based cell wall [cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0009274])] [Term] id: GO:0031504 ! peptidoglycan-based cell wall organization and biogenesis intersection_of: GO:0016043 ! cellular component organization and biogenesis intersection_of: OBO_REL:results_in_structural_change_to GO:0009274 ! peptidoglycan-based cell wall synonym: "cell wall (sensu Bacteria) organization" EXACT [OBOL:automatic] synonym: "cell wall (sensu Bacteria) organization and biogenesis" EXACT [OBOL:automatic] synonym: "murein sacculus organization" EXACT [OBOL:automatic] synonym: "murein sacculus organization and biogenesis" EXACT [OBOL:automatic] synonym: "peptidoglycan-based cell wall organization" EXACT [OBOL:automatic] ! seconds spent parsing GO:0031504: 39.26 ! parse: GO:0031505 using "chitin- and beta-glucan-containing cell wall organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0009277]) [-2] ! no existing xp def ! def: "A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the cell wall; as in, but not restricted to, the fungi (Fungi, ncbi_taxonomy_id:4751)." ! PROPOSED: cellular component organization and biogenesis that OBO_REL:results_in_structural_change_to chitin- and beta-glucan-containing cell wall [cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0009277])] [Term] id: GO:0031505 ! chitin- and beta-glucan-containing cell wall organization and biogenesis intersection_of: GO:0016043 ! cellular component organization and biogenesis intersection_of: OBO_REL:results_in_structural_change_to GO:0009277 ! chitin- and beta-glucan-containing cell wall synonym: "beta-glucan-containing cell wall organization" EXACT [OBOL:automatic] synonym: "cell wall (sensu Fungi) organization" EXACT [OBOL:automatic] synonym: "cell wall (sensu Fungi) organization and biogenesis" EXACT [OBOL:automatic] synonym: "chitin-and beta-glucan-containing cell wall organization" EXACT [OBOL:automatic] synonym: "chitin-and beta-glucan-containing cell wall organization and biogenesis" EXACT [OBOL:automatic] ! seconds spent parsing GO:0031505: 45.31 ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0031506 using "cell wall glycoprotein anabolism" => cdef(GO:0009101, [OBO_REL:results_in_creation_of=GO:0005618]) [-2] ! parse: GO:0031506 using "cell wall glycoprotein biosynthesis" => cdef(GO:0009101, [OBO_REL:results_in_creation_of=GO:0005618]) [-2] ! parse: GO:0031506 using "cell wall glycoprotein biosynthetic process" => cdef(GO:0009101, [OBO_REL:results_in_creation_of=GO:0005618]) [-2] ! parse: GO:0031506 using "cell wall glycoprotein formation" => cdef(GO:0009101, [OBO_REL:results_in_creation_of=GO:0005618]) [-2] ! parse: GO:0031506 using "cell wall glycoprotein formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(glycoprotein, anatomy), OBO_REL:unfolds_in=GO:0005618]) [-14] ! parse: GO:0031506 using "cell wall glycoprotein formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(wall glycoprotein, anatomy), OBO_REL:unfolds_in=CL:0000000]) [-19] ! parse: GO:0031506 using "cell wall glycoprotein formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(wall glycoprotein, anatomy), OBO_REL:unfolds_in=ZFA:0009000]) [-19] ! parse: GO:0031506 using "cell wall glycoprotein synthesis" => cdef(GO:0009101, [OBO_REL:results_in_creation_of=GO:0005618]) [-2] ! no existing xp def ! def: "The chemical reactions and pathways resulting in the formation of cell wall glycoproteins, any cell wall protein that contains covalently bound sugar residues other than as a moiety of nucleic acid." ! PROPOSED: glycoprotein biosynthetic process that OBO_REL:results_in_creation_of cell wall [cdef(GO:0009101, [OBO_REL:results_in_creation_of=GO:0005618])] [Term] id: GO:0031506 ! cell wall glycoprotein biosynthetic process intersection_of: GO:0009101 ! glycoprotein biosynthetic process intersection_of: OBO_REL:results_in_creation_of GO:0005618 ! cell wall def: "The aggregation and bonding together of a set of macromolecules to form a cell wall" [OBOL:automatic] ! seconds spent parsing GO:0031506: 85.78 ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0031507 using "heterochromatin assembly" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0000792]) [-2] ! parse: GO:0031507 using "heterochromatin formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=GO:0000792]) [-2] ! parse: GO:0031507 using "heterochromatin formation" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0000792]) [-2] ! parse: GO:0031507 using "heterochromatin formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0000792]) [-2] ! no existing xp def ! def: "The assembly of chromatin into heterochromatin, a compact and highly condensed form that is often, but not always, transcriptionally silent." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of heterochromatin [cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0000792])] [Term] id: GO:0031507 ! heterochromatin formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of GO:0000792 ! heterochromatin synonym: "heterochromatin anatomical structure formation" EXACT [OBOL:automatic] synonym: "heterochromatin formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0031507: 11.83 ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0031508 using "centric heterochromatin assembly" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0005721]) [-2] ! parse: GO:0031508 using "centric heterochromatin formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=GO:0005721]) [-2] ! parse: GO:0031508 using "centric heterochromatin formation" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0005721]) [-2] ! parse: GO:0031508 using "centric heterochromatin formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0005721]) [-2] ! parse: GO:0031508 using "centromeric heterochromatin biosynthesis" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=GO:0005721]) [-2] ! parse: GO:0031508 using "centromeric heterochromatin formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=GO:0005721]) [-2] ! parse: GO:0031508 using "centromeric heterochromatin formation" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0005721]) [-2] ! parse: GO:0031508 using "centromeric heterochromatin formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0005721]) [-2] ! no existing xp def ! def: "The assembly of chromatin into heterochromatin near the centromere." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of centric heterochromatin [cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0005721])] [Term] id: GO:0031508 ! centric heterochromatin formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of GO:0005721 ! centric heterochromatin synonym: "centric heterochromatin anatomical structure formation" EXACT [OBOL:automatic] synonym: "centric heterochromatin formation of an anatomical structure" EXACT [OBOL:automatic] synonym: "centromeric heterochromatin anatomical structure formation" EXACT [OBOL:automatic] synonym: "centromeric heterochromatin formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0031508: 24.41 ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0031509 using "telomeric heterochromatin assembly" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0031933]) [-2] ! parse: GO:0031509 using "telomeric heterochromatin formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=GO:0031933]) [-2] ! parse: GO:0031509 using "telomeric heterochromatin formation" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0031933]) [-2] ! parse: GO:0031509 using "telomeric heterochromatin formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0031933]) [-2] ! no existing xp def ! def: "The assembly of chromatin into heterochromatin at the telomere." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of telomeric heterochromatin [cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0031933])] [Term] id: GO:0031509 ! telomeric heterochromatin formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of GO:0031933 ! telomeric heterochromatin synonym: "telomeric heterochromatin anatomical structure formation" EXACT [OBOL:automatic] synonym: "telomeric heterochromatin formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0031509: 12.03 ! parse: GO:0031529 using "ruffle organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0001726]) [-2] ! no existing xp def ! def: "A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a ruffle, a projection at the leading edge of a crawling cell." ! PROPOSED: cellular component organization and biogenesis that OBO_REL:results_in_structural_change_to ruffle [cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0001726])] [Term] id: GO:0031529 ! ruffle organization and biogenesis intersection_of: GO:0016043 ! cellular component organization and biogenesis intersection_of: OBO_REL:results_in_structural_change_to GO:0001726 ! ruffle synonym: "membrane ruffle organization" EXACT [OBOL:automatic] synonym: "membrane ruffle organization and biogenesis" EXACT [OBOL:automatic] synonym: "ruffle organization" EXACT [OBOL:automatic] ! seconds spent parsing GO:0031529: 5.62 ! No parse for: GO:0031532 actin cytoskeleton reorganization ! No parse for: GO:0031547 brain-derived neurotrophic factor receptor signaling pathway ! No parse for: GO:0031556 ribosome-mediated transcriptional attenuation ! No parse for: GO:0031565 cytokinesis checkpoint ! No parse for: GO:0031567 cell size control checkpoint ! No parse for: GO:0031577 spindle checkpoint ! No parse for: GO:0031578 spindle orientation checkpoint ! parse: GO:0031579 using "lipid raft organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0045121]) [-2] ! no existing xp def ! def: "A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of lipid rafts, tightly-packed gel-like membrane microdomains enriched in sphingolipids and cholesterol." ! PROPOSED: cellular component organization and biogenesis that OBO_REL:results_in_structural_change_to lipid raft [cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0045121])] [Term] id: GO:0031579 ! lipid raft organization and biogenesis intersection_of: GO:0016043 ! cellular component organization and biogenesis intersection_of: OBO_REL:results_in_structural_change_to GO:0045121 ! lipid raft synonym: "lipid raft organization" EXACT [OBOL:automatic] ! seconds spent parsing GO:0031579: 5.65 ! No parse for: GO:0031580 lipid raft distribution ! parse: GO:0031581 using "hemidesmosome assembly" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0030056]) [-2] ! no existing xp def ! def: "Assembly of hemidesmosomes, integrin-containing protein complexes that bind to laminin in the basal lamina. Hemidesmosomes form the contact between the basal surface of epithelial cells and the underlying basal lamina." ! PROPOSED: cellular component assembly that OBO_REL:results_in_creation_of hemidesmosome [cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0030056])] [Term] id: GO:0031581 ! hemidesmosome assembly intersection_of: GO:0022607 ! cellular component assembly intersection_of: OBO_REL:results_in_creation_of GO:0030056 ! hemidesmosome synonym: "assembly and maintenance of hemidesmosome" EXACT [OBOL:automatic] synonym: "assembly of hemidesmosome" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of hemidesmosome" EXACT [OBOL:automatic] synonym: "biogenesis of hemidesmosome" EXACT [OBOL:automatic] synonym: "cell structure assembly of hemidesmosome" EXACT [OBOL:automatic] synonym: "cellular component assembly of hemidesmosome" EXACT [OBOL:automatic] synonym: "complex assembly of hemidesmosome" EXACT [OBOL:automatic] synonym: "formation of hemidesmosome" EXACT [OBOL:automatic] synonym: "hemidesmosome assembly and maintenance" EXACT [OBOL:automatic] synonym: "hemidesmosome biogenesis" EXACT [OBOL:automatic] synonym: "hemidesmosome biogenesis and assembly" EXACT [OBOL:automatic] synonym: "hemidesmosome cell structure assembly" EXACT [OBOL:automatic] synonym: "hemidesmosome cellular component assembly" EXACT [OBOL:automatic] synonym: "hemidesmosome complex assembly" EXACT [OBOL:automatic] synonym: "hemidesmosome formation" EXACT [OBOL:automatic] def: "The aggregation and bonding together of a set of macromolecules to form a hemidesmosome" [OBOL:automatic] ! seconds spent parsing GO:0031581: 5.6 ! No parse for: GO:0031582 replication fork blocking at rDNA repeats ! No parse for: GO:0031589 cell-substrate adhesion ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0031627 using "t-loop formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(t-loop, anatomy)]) [-7] ! parse: GO:0031627 using "telomeric loop formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(telomeric loop, anatomy)]) [-15] ! no existing xp def ! def: "The process by which linear telomeric DNA is remodeled into duplex loops, by the invasion of a 3' single-stranded overhang into the duplex region." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of anon(t-loop, anatomy) [cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(t-loop, anatomy)])] [Term] id: GO:0031627 ! telomeric loop formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of anatomy:t_-_loop synonym: "t-loop anatomical structure formation" EXACT [OBOL:automatic] synonym: "t-loop formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0031627: 12.83 ! parse: GO:0031629 using "synaptic vesicle fusion to presynaptic membrane" => cdef(GO:0016192, [OBO_REL:results_in_transport_to=GO:0042734]) [-2] ! no existing xp def ! def: "Fusion of the membrane of a synaptic vesicle with its target presynaptic membrane, thereby releasing its cargo neurotransmitters into the synaptic cleft." ! PROPOSED: vesicle-mediated transport that OBO_REL:results_in_transport_to presynaptic membrane [cdef(GO:0016192, [OBO_REL:results_in_transport_to=GO:0042734])] [Term] id: GO:0031629 ! synaptic vesicle fusion to presynaptic membrane intersection_of: GO:0016192 ! vesicle-mediated transport intersection_of: OBO_REL:results_in_transport_to GO:0042734 ! presynaptic membrane synonym: "ARF small monomeric GTPase activity to presynaptic membrane" EXACT [OBOL:automatic] synonym: "RAB small monomeric GTPase activity to presynaptic membrane" EXACT [OBOL:automatic] synonym: "synaptic vesicle fission to presynaptic membrane" EXACT [OBOL:automatic] synonym: "synaptic vesicle internalization to presynaptic membrane" EXACT [OBOL:automatic] synonym: "synaptic vesicle retrieval to presynaptic membrane" EXACT [OBOL:automatic] synonym: "vesicle fusion to presynaptic membrane" EXACT [OBOL:automatic] synonym: "vesicle trafficking to presynaptic membrane" EXACT [OBOL:automatic] synonym: "vesicle transport to presynaptic membrane" EXACT [OBOL:automatic] synonym: "vesicle-fusing ATPase activity to presynaptic membrane" EXACT [OBOL:automatic] synonym: "vesicle-mediated transport to presynaptic membrane" EXACT [OBOL:automatic] ! seconds spent parsing GO:0031629: 10.44 ! No parse for: GO:0031637 regulation of neuronal synaptic plasticity in response to neurotrophin ! Already have xp for: GO:0031668 cellular response to extracellular stimulus ! CURRENT : response to extracellular stimulus that OBO_REL:part_of cellularization [cdef(GO:0009991, [OBO_REL:part_of=GO:0007349])] ! Already have xp for: GO:0031669 cellular response to nutrient levels ! CURRENT : response to nutrient levels that OBO_REL:part_of cellularization [cdef(GO:0031667, [OBO_REL:part_of=GO:0007349])] ! Already have xp for: GO:0031670 cellular response to nutrient ! CURRENT : response to nutrient that OBO_REL:part_of cellularization [cdef(GO:0007584, [OBO_REL:part_of=GO:0007349])] ! parse: GO:0031671 using "primary cell septum biogenesis" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0000936]) [-2] ! no existing xp def ! def: "The chemical reactions and pathways resulting in the formation of the constituents of the primary cell septum following nuclear division." ! PROPOSED: cellular component assembly that OBO_REL:results_in_creation_of primary cell septum [cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0000936])] [Term] id: GO:0031671 ! primary cell septum biogenesis intersection_of: GO:0022607 ! cellular component assembly intersection_of: OBO_REL:results_in_creation_of GO:0000936 ! primary cell septum synonym: "assembly and maintenance of primary cell septum" EXACT [OBOL:automatic] synonym: "assembly of primary cell septum" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of primary cell septum" EXACT [OBOL:automatic] synonym: "biogenesis of primary cell septum" EXACT [OBOL:automatic] synonym: "cell structure assembly of primary cell septum" EXACT [OBOL:automatic] synonym: "cellular component assembly of primary cell septum" EXACT [OBOL:automatic] synonym: "complex assembly of primary cell septum" EXACT [OBOL:automatic] synonym: "formation of primary cell septum" EXACT [OBOL:automatic] synonym: "primary cell septum assembly" EXACT [OBOL:automatic] synonym: "primary cell septum assembly and maintenance" EXACT [OBOL:automatic] synonym: "primary cell septum biogenesis and assembly" EXACT [OBOL:automatic] synonym: "primary cell septum cell structure assembly" EXACT [OBOL:automatic] synonym: "primary cell septum cellular component assembly" EXACT [OBOL:automatic] synonym: "primary cell septum complex assembly" EXACT [OBOL:automatic] synonym: "primary cell septum formation" EXACT [OBOL:automatic] def: "The aggregation and bonding together of a set of macromolecules to form a primary cell septum" [OBOL:automatic] ! seconds spent parsing GO:0031671: 5.86 ! No parse for: GO:0031684 heterotrimeric G-protein complex cycle ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0031860 using "telomeric 3' overhang formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(telomeric 3 ' overhang, anatomy)]) [-23] ! no existing xp def ! def: "The formation of the single stranded telomeric 3' overhang, a conserved feature that ranges in length from 12 nt in budding yeast to approximately 500 nt in humans." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of anon(telomeric 3 ' overhang, anatomy) [cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(telomeric 3 ' overhang, anatomy)])] [Term] id: GO:0031860 ! telomeric 3' overhang formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of anatomy:telomeric_3_'_overhang synonym: "telomeric 3 ' overhang anatomical structure formation" EXACT [OBOL:automatic] synonym: "telomeric 3 ' overhang formation" EXACT [OBOL:automatic] synonym: "telomeric 3 ' overhang formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0031860: 4.33 ! No parse for: GO:0031887 lipid particle transport along microtubule ! No parse for: GO:0032020 ISG15-protein conjugation ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0032022 using "pellicle formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=GO:0020039]) [-2] ! parse: GO:0032022 using "pellicle formation" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0020039]) [-2] ! parse: GO:0032022 using "pellicle formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0020039]) [-2] ! no existing xp def ! def: "A process whereby microorganisms produce an extracellular matrix and form multicellular aggregates at an air-liquid interface." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of pellicle [cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0020039])] [Term] id: GO:0032022 ! pellicle formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of GO:0020039 ! pellicle synonym: "pellicle anatomical structure formation" EXACT [OBOL:automatic] synonym: "pellicle formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0032022: 6.22 ! No parse for: GO:0032042 mitochondrial DNA metabolic process ! No parse for: GO:0032043 mitochondrial DNA catabolic process ! parse: GO:0032053 using "basal body organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0005932]) [-2] ! no existing xp def ! def: "A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a basal body, a short cylindrical array of microtubules and associated proteins found at the base of a eukaryotic cilium or flagellum." ! PROPOSED: cellular component organization and biogenesis that OBO_REL:results_in_structural_change_to basal body [cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0005932])] [Term] id: GO:0032053 ! basal body organization and biogenesis intersection_of: GO:0016043 ! cellular component organization and biogenesis intersection_of: OBO_REL:results_in_structural_change_to GO:0005932 ! basal body synonym: "basal body organization" EXACT [OBOL:automatic] ! seconds spent parsing GO:0032053: 5.94 ! No parse for: GO:0032054 basal body duplication ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0032060 using "bleb formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=GO:0032059]) [-2] ! parse: GO:0032060 using "bleb formation" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0032059]) [-2] ! parse: GO:0032060 using "bleb formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0032059]) [-2] ! no existing xp def ! def: "The assembly of a bleb, a cell extension characterized by rapid formation, rounded shape, and scarcity of organelles within the protrusions." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of bleb [cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0032059])] [Term] id: GO:0032060 ! bleb formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of GO:0032059 ! bleb synonym: "bleb anatomical structure formation" EXACT [OBOL:automatic] synonym: "bleb formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0032060: 16.86 ! parse: GO:0032066 using "nucleolus to nucleoplasm transport" => cdef(GO:0006810, [OBO_REL:results_in_transport_from=GO:0005730, OBO_REL:results_in_transport_to=GO:0005654]) [-3] ! parse: GO:0032066 using "nucleolus to nucleoplasm transport" => cdef(GO:0006810, [and=results_in_transport_of(GO:0005654)/unfolds_in(FBbt:00002690), OBO_REL:unfolds_in=GO:0005730]) [-3] ! no existing xp def ! def: "The directed movement of substances from the nucleolus to the nucleoplasm." ! PROPOSED: transport that and results_in_transport_of(GO:0005654)/unfolds_in(FBbt:00002690) and OBO_REL:unfolds_in nucleolus [cdef(GO:0006810, [and=results_in_transport_of(GO:0005654)/unfolds_in(FBbt:00002690), OBO_REL:unfolds_in=GO:0005730])] [Term] id: GO:0032066 ! nucleolus to nucleoplasm transport intersection_of: GO:0006810 ! transport intersection_of: and results_in_transport_of(GO:0005654)/unfolds_in(FBbt:00002690) intersection_of: OBO_REL:unfolds_in GO:0005730 ! nucleolus ! seconds spent parsing GO:0032066: 17.09 ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0032120 using "FSM assembly" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0005628]) [-2] ! parse: GO:0032120 using "FSM biosynthesis" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=GO:0005628]) [-2] ! parse: GO:0032120 using "FSM formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=GO:0005628]) [-2] ! parse: GO:0032120 using "FSM formation" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0005628]) [-2] ! parse: GO:0032120 using "FSM formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0005628]) [-2] ! parse: GO:0032120 using "forespore membrane biosynthesis" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=GO:0016020, OBO_REL:unfolds_in=GO:0042763]) [-3] ! parse: GO:0032120 using "forespore membrane biosynthesis" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=cdef(GO:0016020, [OBO_REL:part_of=GO:0042763])]) [-3] ! parse: GO:0032120 using "forespore membrane formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=GO:0016020, OBO_REL:unfolds_in=GO:0042763]) [-3] ! parse: GO:0032120 using "forespore membrane formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=cdef(GO:0016020, [OBO_REL:part_of=GO:0042763])]) [-3] ! parse: GO:0032120 using "forespore membrane formation" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0016020, OBO_REL:unfolds_in=GO:0042763]) [-3] ! parse: GO:0032120 using "forespore membrane formation" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=cdef(GO:0016020, [OBO_REL:part_of=GO:0042763])]) [-3] ! parse: GO:0032120 using "forespore membrane formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0016020, OBO_REL:unfolds_in=GO:0042763]) [-3] ! parse: GO:0032120 using "forespore membrane formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=cdef(GO:0016020, [OBO_REL:part_of=GO:0042763])]) [-3] ! parse: GO:0032120 using "prospore membrane formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=GO:0005628]) [-2] ! parse: GO:0032120 using "prospore membrane formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=GO:0016020, OBO_REL:unfolds_in=GO:0042763]) [-3] ! parse: GO:0032120 using "prospore membrane formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=GO:0016020, OBO_REL:unfolds_in=GO:0042764]) [-3] ! parse: GO:0032120 using "prospore membrane formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=cdef(GO:0016020, [OBO_REL:part_of=GO:0042763])]) [-3] ! parse: GO:0032120 using "prospore membrane formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=cdef(GO:0016020, [OBO_REL:part_of=GO:0042764])]) [-3] ! parse: GO:0032120 using "prospore membrane formation" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0005628]) [-2] ! parse: GO:0032120 using "prospore membrane formation" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0016020, OBO_REL:unfolds_in=GO:0042763]) [-3] ! parse: GO:0032120 using "prospore membrane formation" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0016020, OBO_REL:unfolds_in=GO:0042764]) [-3] ! parse: GO:0032120 using "prospore membrane formation" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=cdef(GO:0016020, [OBO_REL:part_of=GO:0042763])]) [-3] ! parse: GO:0032120 using "prospore membrane formation" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=cdef(GO:0016020, [OBO_REL:part_of=GO:0042764])]) [-3] ! parse: GO:0032120 using "prospore membrane formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0005628]) [-2] ! parse: GO:0032120 using "prospore membrane formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0016020, OBO_REL:unfolds_in=GO:0042763]) [-3] ! parse: GO:0032120 using "prospore membrane formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0016020, OBO_REL:unfolds_in=GO:0042764]) [-3] ! parse: GO:0032120 using "prospore membrane formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=cdef(GO:0016020, [OBO_REL:part_of=GO:0042763])]) [-3] ! parse: GO:0032120 using "prospore membrane formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=cdef(GO:0016020, [OBO_REL:part_of=GO:0042764])]) [-3] ! no existing xp def ! def: "The process by which the nascent membrane forms at the meiotic outer plaque and grows until closure occurs and forespores, or prospores, are formed." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of prospore membrane [cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0005628])] [Term] id: GO:0032120 ! prospore membrane formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of GO:0005628 ! prospore membrane synonym: "FSM anatomical structure formation" EXACT [OBOL:automatic] synonym: "FSM formation of an anatomical structure" EXACT [OBOL:automatic] synonym: "forespore membrane (sensu Fungi) anatomical structure formation" EXACT [OBOL:automatic] synonym: "forespore membrane (sensu Fungi) formation" EXACT [OBOL:automatic] synonym: "forespore membrane (sensu Fungi) formation of an anatomical structure" EXACT [OBOL:automatic] synonym: "prospore membrane anatomical structure formation" EXACT [OBOL:automatic] synonym: "prospore membrane formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0032120: 60.19 ! parse: GO:0032122 using "oral apparatus morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=GO:0031912]) [-2] ! parse: GO:0032122 using "oral apparatus organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0031912]) [-2] ! no existing xp def ! def: "A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the oral apparatus." ! PROPOSED: cellular component organization and biogenesis that OBO_REL:results_in_structural_change_to oral apparatus [cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0031912])] [Term] id: GO:0032122 ! oral apparatus organization and biogenesis intersection_of: GO:0016043 ! cellular component organization and biogenesis intersection_of: OBO_REL:results_in_structural_change_to GO:0031912 ! oral apparatus synonym: "oral apparatus organization" EXACT [OBOL:automatic] ! seconds spent parsing GO:0032122: 15.82 ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0032130 using "medial membrane band formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=GO:0032178]) [-2] ! parse: GO:0032130 using "medial membrane band formation" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0032178]) [-2] ! parse: GO:0032130 using "medial membrane band formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0032178]) [-2] ! no existing xp def ! def: "The formation of sterol rich region of the plasma membrane at the cell surface overlying the contractile ring." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of medial membrane band [cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0032178])] [Term] id: GO:0032130 ! medial membrane band formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of GO:0032178 ! medial membrane band synonym: "medial membrane band anatomical structure formation" EXACT [OBOL:automatic] synonym: "medial membrane band formation of an anatomical structure" EXACT [OBOL:automatic] synonym: "sterol-rich membrane band anatomical structure formation" EXACT [OBOL:automatic] synonym: "sterol-rich membrane band formation" EXACT [OBOL:automatic] synonym: "sterol-rich membrane band formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0032130: 6.6 ! parse: GO:0032185 using "septin cytoskeleton organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0032156]) [-2] ! no existing xp def ! def: "A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising septin complexes and their associated proteins." ! PROPOSED: cellular component organization and biogenesis that OBO_REL:results_in_structural_change_to septin cytoskeleton [cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0032156])] [Term] id: GO:0032185 ! septin cytoskeleton organization and biogenesis intersection_of: GO:0016043 ! cellular component organization and biogenesis intersection_of: OBO_REL:results_in_structural_change_to GO:0032156 ! septin cytoskeleton synonym: "septin cytoskeleton organization" EXACT [OBOL:automatic] ! seconds spent parsing GO:0032185: 5.7 ! parse: GO:0032186 using "cellular bud neck septin ring organization" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0000144]) [-2] ! parse: GO:0032186 using "cellular bud neck septin ring organization" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0005940, OBO_REL:unfolds_in=GO:0005935]) [-3] ! parse: GO:0032186 using "cellular bud neck septin ring organization" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=cdef(GO:0005940, [OBO_REL:part_of=GO:0005935])]) [-3] ! parse: GO:0032186 using "cellular bud neck septin ring organization" => cdef(GO:0016043, [and=results_in_structural_change_to(GO:0005940)/unfolds_in(FBbt:00004550), OBO_REL:unfolds_in=GO:0005933]) [-3] ! parse: GO:0032186 using "cellular bud neck septin ring organization" => cdef(GO:0016043, [and=results_in_structural_change_to(GO:0005940)/unfolds_in(MA:0000024), OBO_REL:unfolds_in=GO:0005933]) [-3] ! parse: GO:0032186 using "cellular bud neck septin ring organization" => cdef(cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0005940, OBO_REL:unfolds_in=cdef(FBbt:00004550, [OBO_REL:part_of=PO:0000055])]), [OBO_REL:part_of=GO:0007349]) [-5] ! parse: GO:0032186 using "cellular bud neck septin ring organization" => cdef(cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0005940, OBO_REL:unfolds_in=cdef(MA:0000024, [OBO_REL:part_of=PO:0000055])]), [OBO_REL:part_of=GO:0007349]) [-5] ! parse: GO:0032186 using "cellular bud neck septin ring organization" => cdef(cdef(GO:0016043, [and=results_in_structural_change_to(GO:0005940)/unfolds_in(FBbt:00004550), OBO_REL:unfolds_in=PO:0000055]), [OBO_REL:part_of=GO:0007349]) [-4] ! parse: GO:0032186 using "cellular bud neck septin ring organization" => cdef(cdef(GO:0016043, [and=results_in_structural_change_to(GO:0005940)/unfolds_in(MA:0000024), OBO_REL:unfolds_in=PO:0000055]), [OBO_REL:part_of=GO:0007349]) [-4] ! no existing xp def ! def: "Control of the formation, spatial distribution, and breakdown of a septin ring located at the bud neck." ! PROPOSED: cellular component organization and biogenesis that OBO_REL:results_in_structural_change_to cellular bud neck septin ring [cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0000144])] [Term] id: GO:0032186 ! cellular bud neck septin ring organization intersection_of: GO:0016043 ! cellular component organization and biogenesis intersection_of: OBO_REL:results_in_structural_change_to GO:0000144 ! cellular bud neck septin ring synonym: "cellular bud neck septin ring organization and biogenesis" EXACT [OBOL:automatic] synonym: "septin ring (sensu Saccharomyces) organization" EXACT [OBOL:automatic] synonym: "septin ring (sensu Saccharomyces) organization and biogenesis" EXACT [OBOL:automatic] ! seconds spent parsing GO:0032186: 27.38 ! parse: GO:0032187 using "contractile ring localization" => cdef(GO:0051179, [OBO_REL:results_in_localization_of=GO:0005826]) [-2] ! no existing xp def ! def: "The process by which a contractile ring is assembled and/or maintained in a specific location." ! PROPOSED: localization that OBO_REL:results_in_localization_of contractile ring [cdef(GO:0051179, [OBO_REL:results_in_localization_of=GO:0005826])] [Term] id: GO:0032187 ! contractile ring localization intersection_of: GO:0051179 ! localization intersection_of: OBO_REL:results_in_localization_of GO:0005826 ! contractile ring synonym: "CAR establishment and maintenance of localization" EXACT [OBOL:automatic] synonym: "CAR establishment and maintenance of position" EXACT [OBOL:automatic] synonym: "CAR localization" EXACT [OBOL:automatic] synonym: "constriction ring establishment and maintenance of localization" EXACT [OBOL:automatic] synonym: "constriction ring establishment and maintenance of position" EXACT [OBOL:automatic] synonym: "constriction ring localization" EXACT [OBOL:automatic] synonym: "contractile actomyosin ring establishment and maintenance of localization" EXACT [OBOL:automatic] synonym: "contractile actomyosin ring establishment and maintenance of position" EXACT [OBOL:automatic] synonym: "contractile actomyosin ring localization" EXACT [OBOL:automatic] ! seconds spent parsing GO:0032187: 6.13 ! parse: GO:0032200 using "telomere organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0000781]) [-2] ! parse: GO:0032200 using "telomere organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0000782]) [-2] ! no existing xp def ! def: "A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of telomeres, terminal regions of a linear chromosome that includes the telomeric DNA repeats and associated proteins." ! PROPOSED: cellular component organization and biogenesis that OBO_REL:results_in_structural_change_to telomere cap complex [cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0000782])] [Term] id: GO:0032200 ! telomere organization and biogenesis intersection_of: GO:0016043 ! cellular component organization and biogenesis intersection_of: OBO_REL:results_in_structural_change_to GO:0000782 ! telomere cap complex synonym: "telomere cap complex organization" EXACT [OBOL:automatic] synonym: "telomere cap complex organization and biogenesis" EXACT [OBOL:automatic] synonym: "telomere organization" EXACT [OBOL:automatic] ! seconds spent parsing GO:0032200: 7.19 ! No parse for: GO:0032201 telomere maintenance via semi-conservative replication ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0032202 using "telomere assembly" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0000781]) [-2] ! parse: GO:0032202 using "telomere assembly" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0000782]) [-2] ! parse: GO:0032202 using "telomere formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=GO:0000781]) [-2] ! parse: GO:0032202 using "telomere formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=GO:0000782]) [-2] ! parse: GO:0032202 using "telomere formation" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0000781]) [-2] ! parse: GO:0032202 using "telomere formation" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0000782]) [-2] ! parse: GO:0032202 using "telomere formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0000781]) [-2] ! parse: GO:0032202 using "telomere formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0000782]) [-2] ! no existing xp def ! def: "The creation of a telomere at a non-telomeric double-stranded DNA end." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of telomere cap complex [cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0000782])] [Term] id: GO:0032202 ! telomere assembly intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of GO:0000782 ! telomere cap complex synonym: "telomere anatomical structure formation" EXACT [OBOL:automatic] synonym: "telomere cap complex anatomical structure formation" EXACT [OBOL:automatic] synonym: "telomere cap complex formation" EXACT [OBOL:automatic] synonym: "telomere cap complex formation of an anatomical structure" EXACT [OBOL:automatic] synonym: "telomere formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0032202: 15.56 ! No parse for: GO:0032203 telomere formation via telomerase ! Already have xp for: GO:0032219 cell wall catabolic process during cytogamy ! CURRENT : cell wall catabolic process that OBO_REL:part_of cytogamy [cdef(GO:0016998, [OBO_REL:part_of=GO:0000755])] ! Already have xp for: GO:0032220 plasma membrane fusion during cytogamy ! CURRENT : plasma membrane fusion that OBO_REL:part_of cytogamy [cdef(GO:0045026, [OBO_REL:part_of=GO:0000755])] ! parse: GO:0032252 using "secretory granule localization" => cdef(GO:0051179, [OBO_REL:results_in_localization_of=GO:0030141]) [-2] ! no existing xp def ! def: "The processes by which a secretory granule is transported to, and/or maintained in, a specific location within the cell." ! PROPOSED: localization that OBO_REL:results_in_localization_of secretory granule [cdef(GO:0051179, [OBO_REL:results_in_localization_of=GO:0030141])] [Term] id: GO:0032252 ! secretory granule localization intersection_of: GO:0051179 ! localization intersection_of: OBO_REL:results_in_localization_of GO:0030141 ! secretory granule ! seconds spent parsing GO:0032252: 23.23 ! parse: GO:0032253 using "dense core granule localization" => cdef(GO:0051179, [OBO_REL:results_in_localization_of=GO:0031045]) [-2] ! no existing xp def ! def: "The processes by which a dense core granule is transported to, and/or maintained in, a specific location within the cell." ! PROPOSED: localization that OBO_REL:results_in_localization_of dense core granule [cdef(GO:0051179, [OBO_REL:results_in_localization_of=GO:0031045])] [Term] id: GO:0032253 ! dense core granule localization intersection_of: GO:0051179 ! localization intersection_of: OBO_REL:results_in_localization_of GO:0031045 ! dense core granule ! seconds spent parsing GO:0032253: 11.71 ! No parse for: GO:0032258 CVT pathway ! Already have xp for: GO:0032274 gonadotropin secretion ! CURRENT : secretion that OBO_REL:results_in_creation_or_release_of gonadotropin [cdef(GO:0046903, [OBO_REL:results_in_creation_or_release_of=cell:gonadotropin])] ! No parse for: GO:0032333 activin secretion ! No parse for: GO:0032334 inhibin secretion ! No parse for: GO:0032359 provirus excision ! No parse for: GO:0032360 provirus maintenance ! parse: GO:0032365 using "intracellular lipid transport" => cdef(GO:0006869, [OBO_REL:results_in_transport_of=GO:0005622]) [-2] ! no existing xp def ! def: "The directed movement of lipids within cells." ! PROPOSED: lipid transport that OBO_REL:results_in_transport_of intracellular [cdef(GO:0006869, [OBO_REL:results_in_transport_of=GO:0005622])] [Term] id: GO:0032365 ! intracellular lipid transport intersection_of: GO:0006869 ! lipid transport intersection_of: OBO_REL:results_in_transport_of GO:0005622 ! intracellular synonym: "protoplasm lipid transport" EXACT [OBOL:automatic] ! seconds spent parsing GO:0032365: 11.21 ! parse: GO:0032366 using "intracellular sterol transport" => cdef(GO:0015918, [OBO_REL:results_in_transport_of=GO:0005622]) [-2] ! no existing xp def ! def: "The directed movement of sterols within cells." ! PROPOSED: sterol transport that OBO_REL:results_in_transport_of intracellular [cdef(GO:0015918, [OBO_REL:results_in_transport_of=GO:0005622])] [Term] id: GO:0032366 ! intracellular sterol transport intersection_of: GO:0015918 ! sterol transport intersection_of: OBO_REL:results_in_transport_of GO:0005622 ! intracellular synonym: "protoplasm sterol transport" EXACT [OBOL:automatic] ! seconds spent parsing GO:0032366: 11.2 ! parse: GO:0032367 using "intracellular cholesterol transport" => cdef(GO:0030301, [OBO_REL:results_in_transport_of=GO:0005622]) [-2] ! no existing xp def ! def: "The directed movement of cholesterol, cholest-5-en-3-beta-ol, within cells." ! PROPOSED: cholesterol transport that OBO_REL:results_in_transport_of intracellular [cdef(GO:0030301, [OBO_REL:results_in_transport_of=GO:0005622])] [Term] id: GO:0032367 ! intracellular cholesterol transport intersection_of: GO:0030301 ! cholesterol transport intersection_of: OBO_REL:results_in_transport_of GO:0005622 ! intracellular synonym: "protoplasm cholesterol transport" EXACT [OBOL:automatic] ! seconds spent parsing GO:0032367: 11.18 ! parse: GO:0032400 using "melanosome localization" => cdef(GO:0051179, [OBO_REL:results_in_localization_of=GO:0042470]) [-2] ! no existing xp def ! def: "The processes by which a melanosome is transported to, and/or maintained in, a specific location within the cell." ! PROPOSED: localization that OBO_REL:results_in_localization_of melanosome [cdef(GO:0051179, [OBO_REL:results_in_localization_of=GO:0042470])] [Term] id: GO:0032400 ! melanosome localization intersection_of: GO:0051179 ! localization intersection_of: OBO_REL:results_in_localization_of GO:0042470 ! melanosome ! seconds spent parsing GO:0032400: 6.1 ! parse: GO:0032402 using "melanosome transport" => cdef(GO:0006810, [OBO_REL:results_in_transport_of=GO:0042470]) [-2] ! no existing xp def ! def: "The directed movement of melanosomes into, out of, within or between cells." ! PROPOSED: transport that OBO_REL:results_in_transport_of melanosome [cdef(GO:0006810, [OBO_REL:results_in_transport_of=GO:0042470])] [Term] id: GO:0032402 ! melanosome transport intersection_of: GO:0006810 ! transport intersection_of: OBO_REL:results_in_transport_of GO:0042470 ! melanosome ! seconds spent parsing GO:0032402: 6.1 ! parse: GO:0032418 using "lysosome localization" => cdef(GO:0051179, [OBO_REL:results_in_localization_of=GO:0005764]) [-2] ! no existing xp def ! def: "The processes by which a lysosome is transported to, and/or maintained in, a specific location." ! PROPOSED: localization that OBO_REL:results_in_localization_of lysosome [cdef(GO:0051179, [OBO_REL:results_in_localization_of=GO:0005764])] [Term] id: GO:0032418 ! lysosome localization intersection_of: GO:0051179 ! localization intersection_of: OBO_REL:results_in_localization_of GO:0005764 ! lysosome synonym: "lysosomal cysteine-type endopeptidase establishment and maintenance of localization" EXACT [OBOL:automatic] synonym: "lysosomal cysteine-type endopeptidase establishment and maintenance of position" EXACT [OBOL:automatic] synonym: "lysosomal cysteine-type endopeptidase localization" EXACT [OBOL:automatic] synonym: "lysosomal protein stabilization establishment and maintenance of localization" EXACT [OBOL:automatic] synonym: "lysosomal protein stabilization establishment and maintenance of position" EXACT [OBOL:automatic] synonym: "lysosomal protein stabilization localization" EXACT [OBOL:automatic] ! seconds spent parsing GO:0032418: 6.1 ! parse: GO:0032438 using "melanosome organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0042470]) [-2] ! no existing xp def ! def: "A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a melanosome." ! PROPOSED: cellular component organization and biogenesis that OBO_REL:results_in_structural_change_to melanosome [cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0042470])] [Term] id: GO:0032438 ! melanosome organization and biogenesis intersection_of: GO:0016043 ! cellular component organization and biogenesis intersection_of: OBO_REL:results_in_structural_change_to GO:0042470 ! melanosome synonym: "melanosome organization" EXACT [OBOL:automatic] ! seconds spent parsing GO:0032438: 5.63 ! parse: GO:0032439 using "endosome localization" => cdef(GO:0051179, [OBO_REL:results_in_localization_of=GO:0005768]) [-2] ! no existing xp def ! def: "The processes by which endosomes are transported to, and/or maintained in, a specific location within the cell." ! PROPOSED: localization that OBO_REL:results_in_localization_of endosome [cdef(GO:0051179, [OBO_REL:results_in_localization_of=GO:0005768])] [Term] id: GO:0032439 ! endosome localization intersection_of: GO:0051179 ! localization intersection_of: OBO_REL:results_in_localization_of GO:0005768 ! endosome synonym: "endosomal oligosaccharide transporter establishment and maintenance of localization" EXACT [OBOL:automatic] synonym: "endosomal oligosaccharide transporter establishment and maintenance of position" EXACT [OBOL:automatic] synonym: "endosomal oligosaccharide transporter localization" EXACT [OBOL:automatic] ! seconds spent parsing GO:0032439: 6.13 ! No parse for: GO:0032455 nerve growth factor processing ! parse: GO:0032468 using "calcium ion homeostasis in Golgi" => cdef(GO:0006874, [OBO_REL:unfolds_in=GO:0005794]) [-2] ! parse: GO:0032468 using "regulation of calcium ion concentration in Golgi" => cdef(GO:0006874, [OBO_REL:unfolds_in=GO:0005794]) [-2] ! no existing xp def ! def: "The regulation of the levels, transport, and metabolism of calcium ions within the Golgi apparatus of a cell or between the Golgi and its surroundings." ! PROPOSED: calcium ion homeostasis that OBO_REL:unfolds_in Golgi apparatus [cdef(GO:0006874, [OBO_REL:unfolds_in=GO:0005794])] [Term] id: GO:0032468 ! Golgi calcium ion homeostasis intersection_of: GO:0006874 ! calcium ion homeostasis intersection_of: OBO_REL:unfolds_in GO:0005794 ! Golgi apparatus ! seconds spent parsing GO:0032468: 47.46 ! parse: GO:0032469 using "calcium ion homeostasis in ER" => cdef(GO:0006874, [OBO_REL:unfolds_in=GO:0005783]) [-2] ! parse: GO:0032469 using "calcium ion homeostasis in endoplasmic reticulum" => cdef(GO:0006874, [OBO_REL:unfolds_in=GO:0005783]) [-2] ! parse: GO:0032469 using "regulation of calcium ion concentration in ER" => cdef(GO:0006874, [OBO_REL:unfolds_in=GO:0005783]) [-2] ! parse: GO:0032469 using "regulation of calcium ion concentration in endoplasmic reticulum" => cdef(GO:0006874, [OBO_REL:unfolds_in=GO:0005783]) [-2] ! no existing xp def ! def: "The regulation of the levels, transport, and metabolism of calcium ions within the endoplasmic reticulum of a cell or between the endoplasmic reticulum and its surroundings." ! PROPOSED: calcium ion homeostasis that OBO_REL:unfolds_in endoplasmic reticulum [cdef(GO:0006874, [OBO_REL:unfolds_in=GO:0005783])] [Term] id: GO:0032469 ! endoplasmic reticulum calcium ion homeostasis intersection_of: GO:0006874 ! calcium ion homeostasis intersection_of: OBO_REL:unfolds_in GO:0005783 ! endoplasmic reticulum ! seconds spent parsing GO:0032469: 70.94 ! No parse for: GO:0032470 elevation of endoplasmic reticulum calcium ion concentration ! No parse for: GO:0032471 reduction of endoplasmic reticulum calcium ion concentration ! parse: GO:0032472 using "Golgi calcium ion transport" => cdef(GO:0006816, [OBO_REL:results_in_transport_of=GO:0005794]) [-2] ! no existing xp def ! def: "The directed movement of calcium ions (Ca2+) into, out of or within the Golgi apparatus." ! PROPOSED: calcium ion transport that OBO_REL:results_in_transport_of Golgi apparatus [cdef(GO:0006816, [OBO_REL:results_in_transport_of=GO:0005794])] [Term] id: GO:0032472 ! Golgi calcium ion transport intersection_of: GO:0006816 ! calcium ion transport intersection_of: OBO_REL:results_in_transport_of GO:0005794 ! Golgi apparatus synonym: "Golgi apparatus calcium ion transport" EXACT [OBOL:automatic] synonym: "Golgi complex calcium ion transport" EXACT [OBOL:automatic] ! seconds spent parsing GO:0032472: 10.52 ! No parse for: GO:0032501 multicellular organismal process ! No parse for: GO:0032504 multicellular organism reproduction ! No parse for: GO:0032601 connective tissue growth factor production ! No parse for: GO:0032604 granulocyte macrophage colony-stimulating factor production ! No parse for: GO:0032605 hepatocyte growth factor production ! No parse for: GO:0032609 interferon-gamma production ! No parse for: GO:0032610 interleukin-1 alpha production ! No parse for: GO:0032611 interleukin-1 beta production ! No parse for: GO:0032612 interleukin-1 production ! No parse for: GO:0032613 interleukin-10 production ! No parse for: GO:0032614 interleukin-11 production ! No parse for: GO:0032615 interleukin-12 production ! No parse for: GO:0032616 interleukin-13 production ! No parse for: GO:0032617 interleukin-14 production ! No parse for: GO:0032618 interleukin-15 production ! No parse for: GO:0032619 interleukin-16 production ! No parse for: GO:0032620 interleukin-17 production ! No parse for: GO:0032621 interleukin-18 production ! No parse for: GO:0032622 interleukin-19 production ! No parse for: GO:0032623 interleukin-2 production ! No parse for: GO:0032624 interleukin-20 production ! No parse for: GO:0032625 interleukin-21 production ! No parse for: GO:0032626 interleukin-22 production ! No parse for: GO:0032627 interleukin-23 production ! No parse for: GO:0032628 interleukin-24 production ! No parse for: GO:0032629 interleukin-25 production ! No parse for: GO:0032630 interleukin-26 production ! No parse for: GO:0032631 interleukin-27 production ! No parse for: GO:0032632 interleukin-3 production ! No parse for: GO:0032633 interleukin-4 production ! No parse for: GO:0032634 interleukin-5 production ! No parse for: GO:0032635 interleukin-6 production ! No parse for: GO:0032636 interleukin-7 production ! No parse for: GO:0032637 interleukin-8 production ! No parse for: GO:0032638 interleukin-9 production ! No parse for: GO:0032640 tumor necrosis factor production ! No parse for: GO:0032641 lymphotoxin A production ! parse: GO:0032782 using "bile acid secretion" => cdef(GO:0046717, [OBO_REL:results_in_creation_or_release_of=MA:0002513]) [-2] ! no existing xp def ! def: "The regulated release of bile acid, composed of any of a group of steroid carboxylic acids occurring in bile, by a cell or group of cells." ! PROPOSED: acid secretion that OBO_REL:results_in_creation_or_release_of bile [cdef(GO:0046717, [OBO_REL:results_in_creation_or_release_of=MA:0002513])] [Term] id: GO:0032782 ! bile acid secretion intersection_of: GO:0046717 ! acid secretion intersection_of: OBO_REL:results_in_creation_or_release_of MA:0002513 ! bile ! seconds spent parsing GO:0032782: 9.38 ! parse: GO:0032790 using "ribosome disassembly" => cdef(GO:0022411, [OBO_REL:results_in_breakdown_of=GO:0005840]) [-2] ! no existing xp def ! def: "The disaggregation of a ribosome into its constituent components; includes the dissociation of ribosomal subunits." ! PROPOSED: cellular component disassembly that OBO_REL:results_in_breakdown_of ribosome [cdef(GO:0022411, [OBO_REL:results_in_breakdown_of=GO:0005840])] [Term] id: GO:0032790 ! ribosome disassembly intersection_of: GO:0022411 ! cellular component disassembly intersection_of: OBO_REL:results_in_breakdown_of GO:0005840 ! ribosome synonym: "cell structure disassembly of ribosome" EXACT [OBOL:automatic] synonym: "cellular component disassembly of ribosome" EXACT [OBOL:automatic] synonym: "disassembly of ribosome" EXACT [OBOL:automatic] synonym: "ribosome cell structure disassembly" EXACT [OBOL:automatic] synonym: "ribosome cellular component disassembly" EXACT [OBOL:automatic] ! seconds spent parsing GO:0032790: 14.95 ! parse: GO:0032796 using "uropod organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0001931]) [-2] ! no existing xp def ! def: "A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a uropod, a rigid membrane projection with related cytoskeletal components at the trailing edge of a lymphocyte or other cell in the process of migrating or being activated." ! PROPOSED: cellular component organization and biogenesis that OBO_REL:results_in_structural_change_to uropod [cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0001931])] [Term] id: GO:0032796 ! uropod organization and biogenesis intersection_of: GO:0016043 ! cellular component organization and biogenesis intersection_of: OBO_REL:results_in_structural_change_to GO:0001931 ! uropod synonym: "distal pole complex organization" EXACT [OBOL:automatic] synonym: "distal pole complex organization and biogenesis" EXACT [OBOL:automatic] synonym: "retractile pole organization" EXACT [OBOL:automatic] synonym: "retractile pole organization and biogenesis" EXACT [OBOL:automatic] synonym: "uropod organization" EXACT [OBOL:automatic] ! seconds spent parsing GO:0032796: 5.63 ! No parse for: GO:0032799 low-density lipoprotein receptor metabolic process ! No parse for: GO:0032802 low-density lipoprotein receptor catabolic process ! No relation defined: results_in_complete_developmental_of ! parse: GO:0032808 using "lacrimal gland development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0001296]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the lacrimal gland over time, from its formation to the mature structure. The lacrimal gland produces secretions that lubricate and protect the cornea of the eye." ! PROPOSED: developmental process that results_in_complete_developmental_of lacrimal gland [cdef(GO:0032502, [results_in_complete_developmental_of=MA:0001296])] [Term] id: GO:0032808 ! lacrimal gland development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of MA:0001296 ! lacrimal gland ! seconds spent parsing GO:0032808: 4.77 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0032835 using "glomerular development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(glomerular, anatomy)]) [-11] ! parse: GO:0032835 using "glomerulus development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00005386]) [-2] ! parse: GO:0032835 using "glomerulus development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0001657]) [-2] ! no existing xp def ! def: "The progression of the glomerulus over time from its initial formation until its mature state. The glomerulus is a capillary tuft surrounded by Bowman's capsule in nephrons of the vertebrate kidney." ! PROPOSED: developmental process that results_in_complete_developmental_of glomerulus [cdef(GO:0032502, [results_in_complete_developmental_of=MA:0001657])] [Term] id: GO:0032835 ! glomerulus development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of MA:0001657 ! glomerulus synonym: "glomerular tuft development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0032835: 9.53 ! Already have xp for: GO:0032869 cellular response to insulin stimulus ! CURRENT : response to insulin stimulus that OBO_REL:part_of cellularization [cdef(GO:0032868, [OBO_REL:part_of=GO:0007349])] ! Already have xp for: GO:0032870 cellular response to hormone stimulus ! CURRENT : response to hormone stimulus that OBO_REL:part_of cellularization [cdef(GO:0009725, [OBO_REL:part_of=GO:0007349])] ! No parse for: GO:0032898 neurotrophin production ! No parse for: GO:0032902 nerve growth factor production ! No parse for: GO:0032905 transforming growth factor-beta1 production ! No parse for: GO:0032906 transforming growth factor-beta2 production ! No parse for: GO:0032907 transforming growth factor-beta3 production ! No parse for: GO:0032918 spermidine acetylation ! No parse for: GO:0032919 spermine acetylation ! No parse for: GO:0032924 activin receptor signaling pathway ! No parse for: GO:0032932 negative regulation of astral microtubule depolymerization ! Already have xp for: GO:0032940 secretion by cell ! CURRENT : secretion that OBO_REL:part_of cellularization [cdef(GO:0046903, [OBO_REL:part_of=GO:0007349])] ! parse: GO:0032941 using "secretion by tissue" => cdef(GO:0046903, [OBO_REL:has_enabler=PO:0009007]) [-2] ! parse: GO:0032941 using "tissue secretion" => cdef(GO:0046903, [OBO_REL:results_in_creation_or_release_of=PO:0009007]) [-2] ! no existing xp def ! def: "The regulated release of a substance by a tissue." ! PROPOSED: secretion that OBO_REL:results_in_creation_or_release_of tissue [cdef(GO:0046903, [OBO_REL:results_in_creation_or_release_of=PO:0009007])] [Term] id: GO:0032941 ! secretion by tissue intersection_of: GO:0046903 ! secretion intersection_of: OBO_REL:results_in_creation_or_release_of PO:0009007 ! tissue ! seconds spent parsing GO:0032941: 18.15 ! Already have xp for: GO:0032943 mononuclear cell proliferation ! CURRENT : cell proliferation that OBO_REL:increases_population_size_of mononuclear cell [cdef(GO:0008283, [OBO_REL:increases_population_size_of=CL:0000842])] ! No parse for: GO:0032963 collagen metabolic process ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0032964 using "collagen anabolism" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=GO:0005581]) [-2] ! parse: GO:0032964 using "collagen biosynthesis" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=GO:0005581]) [-2] ! parse: GO:0032964 using "collagen biosynthetic process" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=GO:0005581]) [-2] ! parse: GO:0032964 using "collagen formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=GO:0005581]) [-2] ! parse: GO:0032964 using "collagen formation" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0005581]) [-2] ! parse: GO:0032964 using "collagen formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0005581]) [-2] ! parse: GO:0032964 using "collagen synthesis" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=GO:0005581]) [-2] ! no existing xp def ! def: "The chemical reactions and pathways resulting in the formation of collagen, any of a group of fibrous proteins of very high tensile strength that form the main component of connective tissue in animals. Collagen is highly enriched in glycine (some regions are 33% glycine) and proline, occurring predominantly as 3-hydroxyproline (about 20%)." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of collagen [cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0005581])] [Term] id: GO:0032964 ! collagen biosynthetic process intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of GO:0005581 ! collagen synonym: "collagen anatomical structure formation" EXACT [OBOL:automatic] synonym: "collagen formation of an anatomical structure" EXACT [OBOL:automatic] synonym: "other collagen anatomical structure formation" EXACT [OBOL:automatic] synonym: "other collagen formation" EXACT [OBOL:automatic] synonym: "other collagen formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0032964: 43.04 ! Already have xp for: GO:0032980 keratinocyte activation ! CURRENT : cell activation that OBO_REL:results_in_change_to keratinocyte [cdef(GO:0001775, [OBO_REL:results_in_change_to=CL:0000312])] ! parse: GO:0032981 using "mitochondrial respiratory chain complex I assembly" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0005747]) [-2] ! no existing xp def ! def: "The aggregation and bonding together of a set of components to form mitochondrial respiratory chain complex I." ! PROPOSED: cellular component assembly that OBO_REL:results_in_creation_of mitochondrial respiratory chain complex I [cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0005747])] [Term] id: GO:0032981 ! mitochondrial respiratory chain complex I assembly intersection_of: GO:0022607 ! cellular component assembly intersection_of: OBO_REL:results_in_creation_of GO:0005747 ! mitochondrial respiratory chain complex I synonym: "NADH dehydrogenase complex (ubiquinone) (sensu Eukaryota) assembly" EXACT [OBOL:automatic] synonym: "NADH dehydrogenase complex (ubiquinone) (sensu Eukaryota) assembly and maintenance" EXACT [OBOL:automatic] synonym: "NADH dehydrogenase complex (ubiquinone) (sensu Eukaryota) biogenesis" EXACT [OBOL:automatic] synonym: "NADH dehydrogenase complex (ubiquinone) (sensu Eukaryota) biogenesis and assembly" EXACT [OBOL:automatic] synonym: "NADH dehydrogenase complex (ubiquinone) (sensu Eukaryota) cell structure assembly" EXACT [OBOL:automatic] synonym: "NADH dehydrogenase complex (ubiquinone) (sensu Eukaryota) cellular component assembly" EXACT [OBOL:automatic] synonym: "NADH dehydrogenase complex (ubiquinone) (sensu Eukaryota) complex assembly" EXACT [OBOL:automatic] synonym: "NADH dehydrogenase complex (ubiquinone) (sensu Eukaryota) formation" EXACT [OBOL:automatic] synonym: "assembly and maintenance of NADH dehydrogenase complex (ubiquinone) (sensu Eukaryota)" EXACT [OBOL:automatic] synonym: "assembly and maintenance of mitochondrial respiratory chain complex I" EXACT [OBOL:automatic] synonym: "assembly and maintenance of respiratory chain complex I (sensu Eukaryota)" EXACT [OBOL:automatic] synonym: "assembly of NADH dehydrogenase complex (ubiquinone) (sensu Eukaryota)" EXACT [OBOL:automatic] synonym: "assembly of mitochondrial respiratory chain complex I" EXACT [OBOL:automatic] synonym: "assembly of respiratory chain complex I (sensu Eukaryota)" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of NADH dehydrogenase complex (ubiquinone) (sensu Eukaryota)" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of mitochondrial respiratory chain complex I" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of respiratory chain complex I (sensu Eukaryota)" EXACT [OBOL:automatic] synonym: "biogenesis of NADH dehydrogenase complex (ubiquinone) (sensu Eukaryota)" EXACT [OBOL:automatic] synonym: "biogenesis of mitochondrial respiratory chain complex I" EXACT [OBOL:automatic] synonym: "biogenesis of respiratory chain complex I (sensu Eukaryota)" EXACT [OBOL:automatic] synonym: "cell structure assembly of NADH dehydrogenase complex (ubiquinone) (sensu Eukaryota)" EXACT [OBOL:automatic] synonym: "cell structure assembly of mitochondrial respiratory chain complex I" EXACT [OBOL:automatic] synonym: "cell structure assembly of respiratory chain complex I (sensu Eukaryota)" EXACT [OBOL:automatic] synonym: "cellular component assembly of NADH dehydrogenase complex (ubiquinone) (sensu Eukaryota)" EXACT [OBOL:automatic] synonym: "cellular component assembly of mitochondrial respiratory chain complex I" EXACT [OBOL:automatic] synonym: "cellular component assembly of respiratory chain complex I (sensu Eukaryota)" EXACT [OBOL:automatic] synonym: "complex assembly of NADH dehydrogenase complex (ubiquinone) (sensu Eukaryota)" EXACT [OBOL:automatic] synonym: "complex assembly of mitochondrial respiratory chain complex I" EXACT [OBOL:automatic] synonym: "complex assembly of respiratory chain complex I (sensu Eukaryota)" EXACT [OBOL:automatic] synonym: "formation of NADH dehydrogenase complex (ubiquinone) (sensu Eukaryota)" EXACT [OBOL:automatic] synonym: "formation of mitochondrial respiratory chain complex I" EXACT [OBOL:automatic] synonym: "formation of respiratory chain complex I (sensu Eukaryota)" EXACT [OBOL:automatic] synonym: "mitochondrial respiratory chain complex I assembly and maintenance" EXACT [OBOL:automatic] synonym: "mitochondrial respiratory chain complex I biogenesis" EXACT [OBOL:automatic] synonym: "mitochondrial respiratory chain complex I biogenesis and assembly" EXACT [OBOL:automatic] synonym: "mitochondrial respiratory chain complex I cell structure assembly" EXACT [OBOL:automatic] synonym: "mitochondrial respiratory chain complex I cellular component assembly" EXACT [OBOL:automatic] synonym: "mitochondrial respiratory chain complex I complex assembly" EXACT [OBOL:automatic] synonym: "mitochondrial respiratory chain complex I formation" EXACT [OBOL:automatic] synonym: "respiratory chain complex I (sensu Eukaryota) assembly" EXACT [OBOL:automatic] synonym: "respiratory chain complex I (sensu Eukaryota) assembly and maintenance" EXACT [OBOL:automatic] synonym: "respiratory chain complex I (sensu Eukaryota) biogenesis" EXACT [OBOL:automatic] synonym: "respiratory chain complex I (sensu Eukaryota) biogenesis and assembly" EXACT [OBOL:automatic] synonym: "respiratory chain complex I (sensu Eukaryota) cell structure assembly" EXACT [OBOL:automatic] synonym: "respiratory chain complex I (sensu Eukaryota) cellular component assembly" EXACT [OBOL:automatic] synonym: "respiratory chain complex I (sensu Eukaryota) complex assembly" EXACT [OBOL:automatic] synonym: "respiratory chain complex I (sensu Eukaryota) formation" EXACT [OBOL:automatic] def: "The aggregation and bonding together of a set of macromolecules to form a NADH dehydrogenase complex (ubiquinone) (sensu Eukaryota)" [OBOL:automatic] ! seconds spent parsing GO:0032981: 19.79 ! parse: GO:0032984 using "macromolecular complex disassembly" => cdef(GO:0022411, [OBO_REL:results_in_breakdown_of=GO:0032991]) [-2] ! parse: GO:0032984 using "macromolecule complex disassembly" => cdef(GO:0022411, [OBO_REL:results_in_breakdown_of=GO:0032991]) [-2] ! no existing xp def ! def: "The disaggregation of a macromolecular complex into its constituent components." ! PROPOSED: cellular component disassembly that OBO_REL:results_in_breakdown_of macromolecular complex [cdef(GO:0022411, [OBO_REL:results_in_breakdown_of=GO:0032991])] [Term] id: GO:0032984 ! macromolecular complex disassembly intersection_of: GO:0022411 ! cellular component disassembly intersection_of: OBO_REL:results_in_breakdown_of GO:0032991 ! macromolecular complex synonym: "cell structure disassembly of macromolecular complex" EXACT [OBOL:automatic] synonym: "cell structure disassembly of macromolecule complex" EXACT [OBOL:automatic] synonym: "cellular component disassembly of macromolecular complex" EXACT [OBOL:automatic] synonym: "cellular component disassembly of macromolecule complex" EXACT [OBOL:automatic] synonym: "disassembly of macromolecular complex" EXACT [OBOL:automatic] synonym: "disassembly of macromolecule complex" EXACT [OBOL:automatic] synonym: "macromolecular complex cell structure disassembly" EXACT [OBOL:automatic] synonym: "macromolecular complex cellular component disassembly" EXACT [OBOL:automatic] synonym: "macromolecule complex cell structure disassembly" EXACT [OBOL:automatic] synonym: "macromolecule complex cellular component disassembly" EXACT [OBOL:automatic] ! seconds spent parsing GO:0032984: 11.18 ! parse: GO:0032985 using "protein-carbohydrate complex disassembly" => cdef(GO:0022411, [OBO_REL:results_in_breakdown_of=GO:0032992]) [-2] ! no existing xp def ! def: "The disaggregation of a protein-carbohydrate complex into its constituent components." ! PROPOSED: cellular component disassembly that OBO_REL:results_in_breakdown_of protein-carbohydrate complex [cdef(GO:0022411, [OBO_REL:results_in_breakdown_of=GO:0032992])] [Term] id: GO:0032985 ! protein-carbohydrate complex disassembly intersection_of: GO:0022411 ! cellular component disassembly intersection_of: OBO_REL:results_in_breakdown_of GO:0032992 ! protein-carbohydrate complex synonym: "cell structure disassembly of protein-carbohydrate complex" EXACT [OBOL:automatic] synonym: "cellular component disassembly of protein-carbohydrate complex" EXACT [OBOL:automatic] synonym: "disassembly of protein-carbohydrate complex" EXACT [OBOL:automatic] synonym: "protein-carbohydrate complex cell structure disassembly" EXACT [OBOL:automatic] synonym: "protein-carbohydrate complex cellular component disassembly" EXACT [OBOL:automatic] ! seconds spent parsing GO:0032985: 5.62 ! parse: GO:0032986 using "protein-DNA complex disassembly" => cdef(GO:0022411, [OBO_REL:results_in_breakdown_of=GO:0032993]) [-2] ! no existing xp def ! def: "The disaggregation of a protein-DNA complex into its constituent components." ! PROPOSED: cellular component disassembly that OBO_REL:results_in_breakdown_of protein-DNA complex [cdef(GO:0022411, [OBO_REL:results_in_breakdown_of=GO:0032993])] [Term] id: GO:0032986 ! protein-DNA complex disassembly intersection_of: GO:0022411 ! cellular component disassembly intersection_of: OBO_REL:results_in_breakdown_of GO:0032993 ! protein-DNA complex synonym: "cell structure disassembly of protein-DNA complex" EXACT [OBOL:automatic] synonym: "cellular component disassembly of protein-DNA complex" EXACT [OBOL:automatic] synonym: "disassembly of protein-DNA complex" EXACT [OBOL:automatic] synonym: "protein-DNA complex cell structure disassembly" EXACT [OBOL:automatic] synonym: "protein-DNA complex cellular component disassembly" EXACT [OBOL:automatic] ! seconds spent parsing GO:0032986: 5.62 ! parse: GO:0032987 using "protein-lipid complex disassembly" => cdef(GO:0022411, [OBO_REL:results_in_breakdown_of=GO:0032994]) [-2] ! no existing xp def ! def: "The disaggregation of a protein-lipid complex into its constituent components." ! PROPOSED: cellular component disassembly that OBO_REL:results_in_breakdown_of protein-lipid complex [cdef(GO:0022411, [OBO_REL:results_in_breakdown_of=GO:0032994])] [Term] id: GO:0032987 ! protein-lipid complex disassembly intersection_of: GO:0022411 ! cellular component disassembly intersection_of: OBO_REL:results_in_breakdown_of GO:0032994 ! protein-lipid complex synonym: "cell structure disassembly of protein-lipid complex" EXACT [OBOL:automatic] synonym: "cellular component disassembly of protein-lipid complex" EXACT [OBOL:automatic] synonym: "disassembly of protein-lipid complex" EXACT [OBOL:automatic] synonym: "protein-lipid complex cell structure disassembly" EXACT [OBOL:automatic] synonym: "protein-lipid complex cellular component disassembly" EXACT [OBOL:automatic] ! seconds spent parsing GO:0032987: 5.63 ! parse: GO:0032988 using "RNA-protein complex disassembly" => cdef(GO:0022411, [OBO_REL:results_in_breakdown_of=GO:0030529]) [-2] ! parse: GO:0032988 using "protein-RNA complex disassembly" => cdef(GO:0022411, [OBO_REL:results_in_breakdown_of=GO:0030529]) [-2] ! parse: GO:0032988 using "ribonucleoprotein complex disassembly" => cdef(GO:0022411, [OBO_REL:results_in_breakdown_of=GO:0030529]) [-2] ! no existing xp def ! def: "The disaggregation of a protein-RNA complex into its constituent components." ! PROPOSED: cellular component disassembly that OBO_REL:results_in_breakdown_of ribonucleoprotein complex [cdef(GO:0022411, [OBO_REL:results_in_breakdown_of=GO:0030529])] [Term] id: GO:0032988 ! protein-RNA complex disassembly intersection_of: GO:0022411 ! cellular component disassembly intersection_of: OBO_REL:results_in_breakdown_of GO:0030529 ! ribonucleoprotein complex synonym: "RNA-protein complex cell structure disassembly" EXACT [OBOL:automatic] synonym: "RNA-protein complex cellular component disassembly" EXACT [OBOL:automatic] synonym: "RNP cell structure disassembly" EXACT [OBOL:automatic] synonym: "RNP cellular component disassembly" EXACT [OBOL:automatic] synonym: "RNP disassembly" EXACT [OBOL:automatic] synonym: "cell structure disassembly of RNA-protein complex" EXACT [OBOL:automatic] synonym: "cell structure disassembly of RNP" EXACT [OBOL:automatic] synonym: "cell structure disassembly of protein-RNA complex" EXACT [OBOL:automatic] synonym: "cell structure disassembly of ribonucleoprotein" EXACT [OBOL:automatic] synonym: "cell structure disassembly of ribonucleoprotein complex" EXACT [OBOL:automatic] synonym: "cellular component disassembly of RNA-protein complex" EXACT [OBOL:automatic] synonym: "cellular component disassembly of RNP" EXACT [OBOL:automatic] synonym: "cellular component disassembly of protein-RNA complex" EXACT [OBOL:automatic] synonym: "cellular component disassembly of ribonucleoprotein" EXACT [OBOL:automatic] synonym: "cellular component disassembly of ribonucleoprotein complex" EXACT [OBOL:automatic] synonym: "disassembly of RNA-protein complex" EXACT [OBOL:automatic] synonym: "disassembly of RNP" EXACT [OBOL:automatic] synonym: "disassembly of protein-RNA complex" EXACT [OBOL:automatic] synonym: "disassembly of ribonucleoprotein" EXACT [OBOL:automatic] synonym: "disassembly of ribonucleoprotein complex" EXACT [OBOL:automatic] synonym: "protein-RNA complex cell structure disassembly" EXACT [OBOL:automatic] synonym: "protein-RNA complex cellular component disassembly" EXACT [OBOL:automatic] synonym: "ribonucleoprotein cell structure disassembly" EXACT [OBOL:automatic] synonym: "ribonucleoprotein cellular component disassembly" EXACT [OBOL:automatic] synonym: "ribonucleoprotein complex cell structure disassembly" EXACT [OBOL:automatic] synonym: "ribonucleoprotein complex cellular component disassembly" EXACT [OBOL:automatic] synonym: "ribonucleoprotein disassembly" EXACT [OBOL:automatic] ! seconds spent parsing GO:0032988: 24.17 ! parse: GO:0032989 using "cellular structure morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(cellular structure, anatomy)]) [-19] ! parse: GO:0032989 using "cellular structure morphogenesis" => cdef(cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(structure, anatomy)]), [OBO_REL:part_of=GO:0007349]) [-11] ! no existing xp def ! def: "The process by which cellular structures are generated and organized. Morphogenesis pertains to the creation of form." ! PROPOSED: cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(structure, anatomy)]) that OBO_REL:part_of cellularization [cdef(cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(structure, anatomy)]), [OBO_REL:part_of=GO:0007349])] [Term] id: GO:0032989 ! cellular structure morphogenesis intersection_of: structure_anatomical_structure_morphogenesis intersection_of: OBO_REL:part_of GO:0007349 ! cellularization synonym: "cellular structure anatomical structure morphogenesis" EXACT [OBOL:automatic] synonym: "cellularity structure anatomical structure morphogenesis" EXACT [OBOL:automatic] synonym: "cellularity structure morphogenesis" EXACT [OBOL:automatic] synonym: "cellularization, structure anatomical structure morphogenesis" EXACT [OBOL:automatic] synonym: "cellularization, structure morphogenesis" EXACT [OBOL:automatic] ! seconds spent parsing GO:0032989: 8.31 ! parse: GO:0032990 using "cell part morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=GO:0044464]) [-2] ! parse: GO:0032990 using "cell part morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(part, anatomy), OBO_REL:unfolds_in=CL:0000000]) [-6] ! parse: GO:0032990 using "cell part morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(part, anatomy), OBO_REL:unfolds_in=ZFA:0009000]) [-6] ! no existing xp def ! def: "The process by which the anatomical structures of a cell part are generated and organized. Morphogenesis pertains to the creation of form." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of cell part [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=GO:0044464])] [Term] id: GO:0032990 ! cell part morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of GO:0044464 ! cell part synonym: "cell part anatomical structure morphogenesis" EXACT [OBOL:automatic] ! seconds spent parsing GO:0032990: 12.89 ! Already have xp for: GO:0033002 muscle cell proliferation ! CURRENT : cell proliferation that OBO_REL:increases_population_size_of muscle cell [cdef(GO:0008283, [OBO_REL:increases_population_size_of=CL:0000187])] ! Already have xp for: GO:0033028 myeloid cell apoptosis ! CURRENT : apoptosis that OBO_REL:results_in_death_of myeloid cell [cdef(GO:0006915, [OBO_REL:results_in_death_of=CL:0000763])] ! Already have xp for: GO:0033059 cellular pigmentation ! CURRENT : pigmentation that OBO_REL:part_of cellularization [cdef(GO:0043473, [OBO_REL:part_of=GO:0007349])] ! No parse for: GO:0033060 ocellus pigmentation ! Already have xp for: GO:0033077 T cell differentiation in the thymus ! CURRENT : T cell differentiation that OBO_REL:unfolds_in thymus and OBO_REL:unfolds_in thymus [cdef(GO:0030217, [OBO_REL:unfolds_in=cell:thymus, OBO_REL:unfolds_in=continuant:thymus])] ! Already have xp for: GO:0033079 immature T cell proliferation ! CURRENT : cell proliferation that OBO_REL:increases_population_size_of immature T cell [cdef(GO:0008283, [OBO_REL:increases_population_size_of=CL:0000804])] ! Already have xp for: GO:0033080 immature T cell proliferation in the thymus ! CURRENT : T cell proliferation that OBO_REL:mediated_by thymic and OBO_REL:unfolds_in thymus [cdef(GO:0042098, [OBO_REL:mediated_by=cell:thymic, OBO_REL:unfolds_in=continuant:thymus])] ! parse: GO:0033108 using "mitochondrial respiratory chain complex assembly" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0005746]) [-2] ! no existing xp def ! def: "The aggregation and bonding together of a set of components to form a mitochondrial respiratory chain complex." ! PROPOSED: cellular component assembly that OBO_REL:results_in_creation_of mitochondrial respiratory chain [cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0005746])] [Term] id: GO:0033108 ! mitochondrial respiratory chain complex assembly intersection_of: GO:0022607 ! cellular component assembly intersection_of: OBO_REL:results_in_creation_of GO:0005746 ! mitochondrial respiratory chain synonym: "assembly and maintenance of mitochondrial electron transport chain" EXACT [OBOL:automatic] synonym: "assembly and maintenance of mitochondrial respiratory chain" EXACT [OBOL:automatic] synonym: "assembly of mitochondrial electron transport chain" EXACT [OBOL:automatic] synonym: "assembly of mitochondrial respiratory chain" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of mitochondrial electron transport chain" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of mitochondrial respiratory chain" EXACT [OBOL:automatic] synonym: "biogenesis of mitochondrial electron transport chain" EXACT [OBOL:automatic] synonym: "biogenesis of mitochondrial respiratory chain" EXACT [OBOL:automatic] synonym: "cell structure assembly of mitochondrial electron transport chain" EXACT [OBOL:automatic] synonym: "cell structure assembly of mitochondrial respiratory chain" EXACT [OBOL:automatic] synonym: "cellular component assembly of mitochondrial electron transport chain" EXACT [OBOL:automatic] synonym: "cellular component assembly of mitochondrial respiratory chain" EXACT [OBOL:automatic] synonym: "complex assembly of mitochondrial electron transport chain" EXACT [OBOL:automatic] synonym: "complex assembly of mitochondrial respiratory chain" EXACT [OBOL:automatic] synonym: "formation of mitochondrial electron transport chain" EXACT [OBOL:automatic] synonym: "formation of mitochondrial respiratory chain" EXACT [OBOL:automatic] synonym: "mitochondrial electron transport chain assembly" EXACT [OBOL:automatic] synonym: "mitochondrial electron transport chain assembly and maintenance" EXACT [OBOL:automatic] synonym: "mitochondrial electron transport chain biogenesis" EXACT [OBOL:automatic] synonym: "mitochondrial electron transport chain biogenesis and assembly" EXACT [OBOL:automatic] synonym: "mitochondrial electron transport chain cell structure assembly" EXACT [OBOL:automatic] synonym: "mitochondrial electron transport chain cellular component assembly" EXACT [OBOL:automatic] synonym: "mitochondrial electron transport chain complex assembly" EXACT [OBOL:automatic] synonym: "mitochondrial electron transport chain formation" EXACT [OBOL:automatic] synonym: "mitochondrial respiratory chain assembly" EXACT [OBOL:automatic] synonym: "mitochondrial respiratory chain assembly and maintenance" EXACT [OBOL:automatic] synonym: "mitochondrial respiratory chain biogenesis" EXACT [OBOL:automatic] synonym: "mitochondrial respiratory chain biogenesis and assembly" EXACT [OBOL:automatic] synonym: "mitochondrial respiratory chain cell structure assembly" EXACT [OBOL:automatic] synonym: "mitochondrial respiratory chain cellular component assembly" EXACT [OBOL:automatic] synonym: "mitochondrial respiratory chain formation" EXACT [OBOL:automatic] def: "The aggregation and bonding together of a set of macromolecules to form a mitochondrial electron transport chain" [OBOL:automatic] ! seconds spent parsing GO:0033108: 5.65 ! No parse for: GO:0033109 cortical actin cytoskeleton stabilization ! No parse for: GO:0033152 immunoglobulin V(D)J recombination ! Already have xp for: GO:0033153 T cell receptor V(D)J recombination ! CURRENT : V(D)J recombination that OBO_REL:mediated_by TCR [cdef(GO:0033151, [OBO_REL:mediated_by=cell:TCR])] ! No parse for: GO:0033173 calcineurin-NFAT signaling pathway ! No parse for: GO:0033209 tumor necrosis factor-mediated signaling pathway ! No parse for: GO:0033210 leptin-mediated signaling pathway ! No parse for: GO:0033211 adiponectin-mediated signaling pathway ! No parse for: GO:0033258 plastid DNA metabolic process ! No parse for: GO:0033259 plastid DNA replication ! No parse for: GO:0033275 actin-myosin filament sliding ! parse: GO:0033278 using "cell proliferation in mesencephalon" => cdef(GO:0008283, [OBO_REL:unfolds_in=MA:0000207]) [-2] ! parse: GO:0033278 using "cell proliferation in mesencephalon" => cdef(GO:0008283, [OBO_REL:unfolds_in=ZFA:0000128]) [-2] ! parse: GO:0033278 using "cell proliferation in mesencephalon" => cdef(cdef(GO:0008283, [OBO_REL:increases_population_size_of=CL:0000000]), [OBO_REL:unfolds_in=MA:0000207]) [-3] ! parse: GO:0033278 using "cell proliferation in mesencephalon" => cdef(cdef(GO:0008283, [OBO_REL:increases_population_size_of=CL:0000000]), [OBO_REL:unfolds_in=ZFA:0000128]) [-3] ! parse: GO:0033278 using "cell proliferation in mesencephalon" => cdef(cdef(ZFA:0000098, [OBO_REL:results_in_division_of=CL:0000000]), [OBO_REL:unfolds_in=MA:0000207]) [-3] ! parse: GO:0033278 using "cell proliferation in mesencephalon" => cdef(cdef(ZFA:0000098, [OBO_REL:results_in_division_of=CL:0000000]), [OBO_REL:unfolds_in=ZFA:0000128]) [-3] ! parse: GO:0033278 using "cell proliferation in midbrain" => cdef(GO:0008283, [OBO_REL:unfolds_in=MA:0000207]) [-2] ! parse: GO:0033278 using "cell proliferation in midbrain" => cdef(GO:0008283, [OBO_REL:unfolds_in=ZFA:0000128]) [-2] ! parse: GO:0033278 using "cell proliferation in midbrain" => cdef(cdef(GO:0008283, [OBO_REL:increases_population_size_of=CL:0000000]), [OBO_REL:unfolds_in=MA:0000207]) [-3] ! parse: GO:0033278 using "cell proliferation in midbrain" => cdef(cdef(GO:0008283, [OBO_REL:increases_population_size_of=CL:0000000]), [OBO_REL:unfolds_in=ZFA:0000128]) [-3] ! parse: GO:0033278 using "cell proliferation in midbrain" => cdef(cdef(ZFA:0000098, [OBO_REL:results_in_division_of=CL:0000000]), [OBO_REL:unfolds_in=MA:0000207]) [-3] ! parse: GO:0033278 using "cell proliferation in midbrain" => cdef(cdef(ZFA:0000098, [OBO_REL:results_in_division_of=CL:0000000]), [OBO_REL:unfolds_in=ZFA:0000128]) [-3] ! no existing xp def ! def: "The multiplication or reproduction of cells, resulting in the rapid expansion of a cell population in the midbrain." ! PROPOSED: cell proliferation that OBO_REL:unfolds_in midbrain [cdef(GO:0008283, [OBO_REL:unfolds_in=ZFA:0000128])] [Term] id: GO:0033278 ! cell proliferation in midbrain intersection_of: GO:0008283 ! cell proliferation intersection_of: OBO_REL:unfolds_in ZFA:0000128 ! midbrain ! seconds spent parsing GO:0033278: 41.1 ! No parse for: GO:0035002 liquid clearance, open tracheal system ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0035017 using "cuticle pattern formation" => cdef(GO:0007389, [OBO_REL:results_in_developmental_progression_of=FBbt:00004970]) [-2] ! parse: GO:0035017 using "cuticle pattern formation" => cdef(GO:0007389, [OBO_REL:results_in_developmental_progression_of=MA:0002704]) [-2] ! parse: GO:0035017 using "cuticle pattern formation" => cdef(GO:0007389, [OBO_REL:results_in_developmental_progression_of=PO:0000022]) [-2] ! parse: GO:0035017 using "cuticle pattern formation" => cdef(GO:0007389, [OBO_REL:results_in_patterning_for=FBbt:00004970]) [-2] ! parse: GO:0035017 using "cuticle pattern formation" => cdef(GO:0007389, [OBO_REL:results_in_patterning_for=MA:0002704]) [-2] ! parse: GO:0035017 using "cuticle pattern formation" => cdef(GO:0007389, [OBO_REL:results_in_patterning_for=PO:0000022]) [-2] ! parse: GO:0035017 using "cuticle pattern formation" => cdef(GO:0007389, [OBO_REL:unfolds_in=FBbt:00004970]) [-2] ! parse: GO:0035017 using "cuticle pattern formation" => cdef(GO:0007389, [OBO_REL:unfolds_in=MA:0002704]) [-2] ! parse: GO:0035017 using "cuticle pattern formation" => cdef(GO:0007389, [OBO_REL:unfolds_in=PO:0000022]) [-2] ! parse: GO:0035017 using "cuticle pattern formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(pattern, anatomy), OBO_REL:unfolds_in=FBbt:00004970]) [-9] ! parse: GO:0035017 using "cuticle pattern formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(pattern, anatomy), OBO_REL:unfolds_in=MA:0002704]) [-9] ! parse: GO:0035017 using "cuticle pattern formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(pattern, anatomy), OBO_REL:unfolds_in=PO:0000022]) [-9] ! no existing xp def ! def: "The regionalization process that gives rise to the patterns of cell differentiation in the cuticle." ! PROPOSED: pattern specification process that OBO_REL:unfolds_in cuticle [cdef(GO:0007389, [OBO_REL:unfolds_in=PO:0000022])] [Term] id: GO:0035017 ! cuticle pattern formation intersection_of: GO:0007389 ! pattern specification process intersection_of: OBO_REL:unfolds_in PO:0000022 ! cuticle ! seconds spent parsing GO:0035017: 7.53 ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0035018 using "adult chitin-based cuticle pattern formation" => cdef(GO:0007389, [OBO_REL:results_in_developmental_progression_of=anon(chitin-based cuticle, anatomy), OBO_REL:unfolds_in=FBbt:00003004]) [-22] ! parse: GO:0035018 using "adult chitin-based cuticle pattern formation" => cdef(GO:0035017, [OBO_REL:results_in_developmental_progression_of=anon(chitin-based, anatomy), OBO_REL:unfolds_in=FBbt:00003004]) [-14] ! parse: GO:0035018 using "adult chitin-based cuticle pattern formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(chitin-based cuticle pattern, anatomy), OBO_REL:unfolds_in=FBbt:00003004]) [-30] ! no existing xp def ! def: "The process that gives rise to the patterns of cell differentiation that will arise in the chitin-based adult cuticle." ! PROPOSED: cuticle pattern formation that OBO_REL:results_in_developmental_progression_of anon(chitin-based, anatomy) and OBO_REL:unfolds_in adult [cdef(GO:0035017, [OBO_REL:results_in_developmental_progression_of=anon(chitin-based, anatomy), OBO_REL:unfolds_in=FBbt:00003004])] [Term] id: GO:0035018 ! adult chitin-based cuticle pattern formation intersection_of: GO:0035017 ! cuticle pattern formation intersection_of: OBO_REL:results_in_developmental_progression_of anatomy:chitin_-_based intersection_of: OBO_REL:unfolds_in FBbt:00003004 ! adult synonym: "imago chitin-based cuticle pattern formation" EXACT [OBOL:automatic] ! seconds spent parsing GO:0035018: 31.64 ! No parse for: GO:0035019 somatic stem cell maintenance ! Already have xp for: GO:0035026 leading edge cell differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of leading edge cell [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000730])] ! Already have xp for: GO:0035027 leading edge cell fate commitment ! CURRENT : cell fate commitment that OBO_REL:results_in_commitment_to leading edge cell [cdef(GO:0045165, [OBO_REL:results_in_commitment_to=CL:0000730])] ! Already have xp for: GO:0035028 leading edge cell fate determination ! CURRENT : cell fate determination that OBO_REL:results_in_determination_to leading edge cell [cdef(GO:0001709, [OBO_REL:results_in_determination_to=CL:0000730])] ! Already have xp for: GO:0035036 sperm-egg recognition ! CURRENT : cell recognition that OBO_REL:has_agent sperm and OBO_REL:has_agent egg [cdef(GO:0008037, [OBO_REL:has_agent=CL:0000019, OBO_REL:has_agent=CL:0000025])] ! No parse for: GO:0035037 sperm entry ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0035038 using "female pronucleus formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=FBbt:00000048, OBO_REL:unfolds_in=cell:female]) [-3] ! parse: GO:0035038 using "female pronucleus formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=FBbt:00000050]) [-2] ! parse: GO:0035038 using "female pronucleus formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=GO:0001939]) [-2] ! parse: GO:0035038 using "female pronucleus formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=GO:0045120, OBO_REL:unfolds_in=cell:female]) [-3] ! parse: GO:0035038 using "female pronucleus formation" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0001939]) [-2] ! parse: GO:0035038 using "female pronucleus formation" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0045120, OBO_REL:unfolds_in=cell:female]) [-3] ! parse: GO:0035038 using "female pronucleus formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=FBbt:00000048, OBO_REL:unfolds_in=cell:female]) [-3] ! parse: GO:0035038 using "female pronucleus formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=FBbt:00000050]) [-2] ! parse: GO:0035038 using "female pronucleus formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0001939]) [-2] ! parse: GO:0035038 using "female pronucleus formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0045120, OBO_REL:unfolds_in=cell:female]) [-3] ! no existing xp def ! def: "Formation of the haploid nucleus of the unfertilized egg." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of female pronucleus [cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0001939])] [Term] id: GO:0035038 ! female pronucleus formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of GO:0001939 ! female pronucleus synonym: "female pronucleus anatomical structure formation" EXACT [OBOL:automatic] synonym: "female pronucleus formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0035038: 17.11 ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0035039 using "male pronucleus formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=FBbt:00000048, OBO_REL:unfolds_in=cell:male]) [-3] ! parse: GO:0035039 using "male pronucleus formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=FBbt:00000049]) [-2] ! parse: GO:0035039 using "male pronucleus formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=GO:0001940]) [-2] ! parse: GO:0035039 using "male pronucleus formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=GO:0045120, OBO_REL:unfolds_in=cell:male]) [-3] ! parse: GO:0035039 using "male pronucleus formation" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0001940]) [-2] ! parse: GO:0035039 using "male pronucleus formation" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0045120, OBO_REL:unfolds_in=cell:male]) [-3] ! parse: GO:0035039 using "male pronucleus formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=FBbt:00000048, OBO_REL:unfolds_in=cell:male]) [-3] ! parse: GO:0035039 using "male pronucleus formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=FBbt:00000049]) [-2] ! parse: GO:0035039 using "male pronucleus formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0001940]) [-2] ! parse: GO:0035039 using "male pronucleus formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0045120, OBO_REL:unfolds_in=cell:male]) [-3] ! no existing xp def ! def: "The conversion at fertilization of the inactive sperm nucleus into a male pronucleus with its chromosomes processed for the first zygotic division." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of male pronucleus [cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0001940])] [Term] id: GO:0035039 ! male pronucleus formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of GO:0001940 ! male pronucleus synonym: "male pronucleus anatomical structure formation" EXACT [OBOL:automatic] synonym: "male pronucleus formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0035039: 10.11 ! No parse for: GO:0035040 sperm nuclear envelope removal ! No parse for: GO:0035041 sperm chromatin decondensation ! No parse for: GO:0035042 fertilization, exchange of chromosomal proteins ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0035044 using "sperm aster formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=GO:0005818, OBO_REL:unfolds_in=CL:0000019]) [-3] ! parse: GO:0035044 using "sperm aster formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=GO:0005818, OBO_REL:unfolds_in=FBbt:00004954]) [-3] ! parse: GO:0035044 using "sperm aster formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=GO:0005818, OBO_REL:unfolds_in=ZFA:0009006]) [-3] ! parse: GO:0035044 using "sperm aster formation" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0005818, OBO_REL:unfolds_in=CL:0000019]) [-3] ! parse: GO:0035044 using "sperm aster formation" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0005818, OBO_REL:unfolds_in=FBbt:00004954]) [-3] ! parse: GO:0035044 using "sperm aster formation" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0005818, OBO_REL:unfolds_in=ZFA:0009006]) [-3] ! parse: GO:0035044 using "sperm aster formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0005818, OBO_REL:unfolds_in=CL:0000019]) [-3] ! parse: GO:0035044 using "sperm aster formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0005818, OBO_REL:unfolds_in=FBbt:00004954]) [-3] ! parse: GO:0035044 using "sperm aster formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0005818, OBO_REL:unfolds_in=ZFA:0009006]) [-3] ! no existing xp def ! def: "Formation and organization of an aster composed of microtubule arrays originating from the sperm basal body and extending virtually to the egg periphery. The sperm aster ensures the appropriate positioning of the male and female pronuclei." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of aster and OBO_REL:unfolds_in sperm [cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0005818, OBO_REL:unfolds_in=ZFA:0009006])] [Term] id: GO:0035044 ! sperm aster formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of GO:0005818 ! aster intersection_of: OBO_REL:unfolds_in ZFA:0009006 ! sperm synonym: "sperm cell aster anatomical structure formation" EXACT [OBOL:automatic] synonym: "sperm cell aster formation" EXACT [OBOL:automatic] synonym: "sperm cell aster formation of an anatomical structure" EXACT [OBOL:automatic] synonym: "spermatozoid aster anatomical structure formation" EXACT [OBOL:automatic] synonym: "spermatozoid aster formation" EXACT [OBOL:automatic] synonym: "spermatozoid aster formation of an anatomical structure" EXACT [OBOL:automatic] synonym: "spermatozoon aster anatomical structure formation" EXACT [OBOL:automatic] synonym: "spermatozoon aster formation" EXACT [OBOL:automatic] synonym: "spermatozoon aster formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0035044: 14.27 ! parse: GO:0035045 using "sperm plasma membrane disassembly" => cdef(GO:0022411, [OBO_REL:results_in_breakdown_of=GO:0005886, OBO_REL:unfolds_in=CL:0000019]) [-3] ! parse: GO:0035045 using "sperm plasma membrane disassembly" => cdef(GO:0022411, [OBO_REL:results_in_breakdown_of=GO:0005886, OBO_REL:unfolds_in=FBbt:00004954]) [-3] ! parse: GO:0035045 using "sperm plasma membrane disassembly" => cdef(GO:0022411, [OBO_REL:results_in_breakdown_of=GO:0005886, OBO_REL:unfolds_in=ZFA:0009006]) [-3] ! parse: GO:0035045 using "sperm plasma membrane disassembly" => cdef(GO:0022411, [OBO_REL:results_in_breakdown_of=GO:0016020, OBO_REL:unfolds_in=cdef(MA:0002501, [OBO_REL:part_of=FBbt:00004954])]) [-4] ! parse: GO:0035045 using "sperm plasma membrane disassembly" => cdef(GO:0022411, [OBO_REL:results_in_breakdown_of=GO:0016020, OBO_REL:unfolds_in=cdef(MA:0002501, [OBO_REL:part_of=ZFA:0009006])]) [-4] ! parse: GO:0035045 using "sperm plasma membrane disassembly" => cdef(GO:0022411, [and=results_in_breakdown_of(GO:0016020)/unfolds_in(MA:0002501), OBO_REL:unfolds_in=CL:0000019]) [-3] ! parse: GO:0035045 using "sperm plasma membrane disassembly" => cdef(GO:0022411, [and=results_in_breakdown_of(GO:0016020)/unfolds_in(MA:0002501), OBO_REL:unfolds_in=FBbt:00004954]) [-3] ! parse: GO:0035045 using "sperm plasma membrane disassembly" => cdef(GO:0022411, [and=results_in_breakdown_of(GO:0016020)/unfolds_in(MA:0002501), OBO_REL:unfolds_in=ZFA:0009006]) [-3] ! no existing xp def ! def: "The gradual disintegration of the sperm plasma membrane following insemination. This process is seen in Drosophila after entry of the entire sperm, surrounded by its plasma membrane, into the egg." ! PROPOSED: cellular component disassembly that and results_in_breakdown_of(GO:0016020)/unfolds_in(MA:0002501) and OBO_REL:unfolds_in sperm [cdef(GO:0022411, [and=results_in_breakdown_of(GO:0016020)/unfolds_in(MA:0002501), OBO_REL:unfolds_in=ZFA:0009006])] [Term] id: GO:0035045 ! sperm plasma membrane disassembly intersection_of: GO:0022411 ! cellular component disassembly intersection_of: and results_in_breakdown_of(GO:0016020)/unfolds_in(MA:0002501) intersection_of: OBO_REL:unfolds_in ZFA:0009006 ! sperm ! seconds spent parsing GO:0035045: 79.16 ! No parse for: GO:0035047 centrosomal and pronuclear rotation ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0035050 using "embryonic heart tube development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(tube, anatomy), OBO_REL:unfolds_in=FBbt:00005684]) [-6] ! parse: GO:0035050 using "embryonic heart tube development" => cdef(GO:0035295, [OBO_REL:results_in_developmental_progression_of=FBbt:00005684]) [-2] ! parse: GO:0035050 using "embryonic heart tube development" => cdef(cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000360]), [OBO_REL:part_of=GO:0009790]) [-3] ! parse: GO:0035050 using "embryonic heart tube development" => cdef(cdef(GO:0032502, [results_in_complete_developmental_of=anon(tube, anatomy), OBO_REL:unfolds_in=MA:0000072]), [OBO_REL:part_of=GO:0009790]) [-7] ! parse: GO:0035050 using "embryonic heart tube development" => cdef(cdef(GO:0032502, [results_in_complete_developmental_of=anon(tube, anatomy), OBO_REL:unfolds_in=ZFA:0000114]), [OBO_REL:part_of=GO:0009790]) [-7] ! parse: GO:0035050 using "embryonic heart tube development" => cdef(cdef(GO:0035295, [OBO_REL:results_in_developmental_progression_of=MA:0000072]), [OBO_REL:part_of=GO:0009790]) [-3] ! parse: GO:0035050 using "embryonic heart tube development" => cdef(cdef(GO:0035295, [OBO_REL:results_in_developmental_progression_of=ZFA:0000114]), [OBO_REL:part_of=GO:0009790]) [-3] ! no existing xp def ! def: "The process whose specific outcome is the progression of the embryonic heart tube over time, from its formation to the mature structure." ! PROPOSED: tube development that OBO_REL:results_in_developmental_progression_of embryonic heart [cdef(GO:0035295, [OBO_REL:results_in_developmental_progression_of=FBbt:00005684])] [Term] id: GO:0035050 ! embryonic heart tube development intersection_of: GO:0035295 ! tube development intersection_of: OBO_REL:results_in_developmental_progression_of FBbt:00005684 ! embryonic heart ! seconds spent parsing GO:0035050: 16.29 ! parse: GO:0035051 using "cardiac cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(cardiac, cell)]) [-8] ! parse: GO:0035051 using "cardiac cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(cardiac cell, cell)]) [-13] ! parse: GO:0035051 using "heart cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000000, OBO_REL:unfolds_in=MA:0000072]) [-3] ! parse: GO:0035051 using "heart cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000000, OBO_REL:unfolds_in=ZFA:0000114]) [-3] ! parse: GO:0035051 using "heart cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(heart, cell)]) [-6] ! parse: GO:0035051 using "heart cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(heart cell, cell)]) [-11] ! no existing xp def ! def: "The process whereby a relatively unspecialized cell acquires the specialized structural and/or functional features of a cell that will form part of the cardiac organ of an individual." ! PROPOSED: cell differentiation that OBO_REL:results_in_acquisition_of_features_of cell and OBO_REL:unfolds_in heart [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000000, OBO_REL:unfolds_in=ZFA:0000114])] [Term] id: GO:0035051 ! cardiac cell differentiation intersection_of: GO:0030154 ! cell differentiation intersection_of: OBO_REL:results_in_acquisition_of_features_of CL:0000000 ! cell intersection_of: OBO_REL:unfolds_in ZFA:0000114 ! heart ! seconds spent parsing GO:0035051: 16.21 ! No parse for: GO:0035053 dorsal vessel heart proper cell fate commitment ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0035054 using "embryonic heart tube anterior/posterior pattern formation" => cdef(GO:0007389, [OBO_REL:results_in_developmental_progression_of=anon(tube anterior/posterior, anatomy), OBO_REL:unfolds_in=FBbt:00005684]) [-25] ! parse: GO:0035054 using "embryonic heart tube anterior/posterior pattern formation" => cdef(GO:0009952, [OBO_REL:results_in_developmental_progression_of=anon(tube, anatomy), OBO_REL:unfolds_in=FBbt:00005684]) [-6] ! parse: GO:0035054 using "embryonic heart tube anterior/posterior pattern formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(tube anterior/posterior pattern, anatomy), OBO_REL:unfolds_in=FBbt:00005684]) [-33] ! parse: GO:0035054 using "embryonic heart tube anterior/posterior pattern formation" => cdef(cdef(GO:0007389, [OBO_REL:results_in_developmental_progression_of=anon(anterior/posterior, anatomy), OBO_REL:unfolds_in=ZFA:0000360]), [OBO_REL:part_of=GO:0009790]) [-21] ! parse: GO:0035054 using "embryonic heart tube anterior/posterior pattern formation" => cdef(cdef(GO:0007389, [OBO_REL:results_in_developmental_progression_of=anon(tube anterior/posterior, anatomy), OBO_REL:unfolds_in=MA:0000072]), [OBO_REL:part_of=GO:0009790]) [-26] ! parse: GO:0035054 using "embryonic heart tube anterior/posterior pattern formation" => cdef(cdef(GO:0007389, [OBO_REL:results_in_developmental_progression_of=anon(tube anterior/posterior, anatomy), OBO_REL:unfolds_in=ZFA:0000114]), [OBO_REL:part_of=GO:0009790]) [-26] ! parse: GO:0035054 using "embryonic heart tube anterior/posterior pattern formation" => cdef(cdef(GO:0009952, [OBO_REL:results_in_developmental_progression_of=ZFA:0000360]), [OBO_REL:part_of=GO:0009790]) [-3] ! parse: GO:0035054 using "embryonic heart tube anterior/posterior pattern formation" => cdef(cdef(GO:0009952, [OBO_REL:results_in_developmental_progression_of=anon(tube, anatomy), OBO_REL:unfolds_in=MA:0000072]), [OBO_REL:part_of=GO:0009790]) [-7] ! parse: GO:0035054 using "embryonic heart tube anterior/posterior pattern formation" => cdef(cdef(GO:0009952, [OBO_REL:results_in_developmental_progression_of=anon(tube, anatomy), OBO_REL:unfolds_in=ZFA:0000114]), [OBO_REL:part_of=GO:0009790]) [-7] ! parse: GO:0035054 using "embryonic heart tube anterior/posterior pattern formation" => cdef(cdef(GO:0009952, [OBO_REL:results_in_patterning_for=ZFA:0000360]), [OBO_REL:part_of=GO:0009790]) [-3] ! parse: GO:0035054 using "embryonic heart tube anterior/posterior pattern formation" => cdef(cdef(GO:0009952, [OBO_REL:unfolds_in=ZFA:0000360]), [OBO_REL:part_of=GO:0009790]) [-3] ! parse: GO:0035054 using "embryonic heart tube anterior/posterior pattern formation" => cdef(cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(anterior/posterior pattern, anatomy), OBO_REL:unfolds_in=ZFA:0000360]), [OBO_REL:part_of=GO:0009790]) [-29] ! parse: GO:0035054 using "embryonic heart tube anterior/posterior pattern formation" => cdef(cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(tube anterior/posterior pattern, anatomy), OBO_REL:unfolds_in=MA:0000072]), [OBO_REL:part_of=GO:0009790]) [-34] ! parse: GO:0035054 using "embryonic heart tube anterior/posterior pattern formation" => cdef(cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(tube anterior/posterior pattern, anatomy), OBO_REL:unfolds_in=ZFA:0000114]), [OBO_REL:part_of=GO:0009790]) [-34] ! no existing xp def ! def: "The establishment, maintenance and elaboration of cell differentiation that results in the anterior/posterior subdivision of the embryonic heart tube. In Drosophila this results in subdivision of the dorsal vessel into to the posterior heart proper and the anterior aorta." ! PROPOSED: cdef(GO:0009952, [OBO_REL:unfolds_in=ZFA:0000360]) that OBO_REL:part_of embryonic development [cdef(cdef(GO:0009952, [OBO_REL:unfolds_in=ZFA:0000360]), [OBO_REL:part_of=GO:0009790])] [Term] id: GO:0035054 ! embryonic heart tube anterior/posterior pattern formation intersection_of: cdef('GO:0009952', ['OBO_REL:unfolds_in'='ZFA:0000360']) intersection_of: OBO_REL:part_of GO:0009790 ! embryonic development synonym: "embryogenesis, heart tube anterior/posterior pattern formation" EXACT [OBOL:automatic] synonym: "embryonal development, heart tube anterior/posterior pattern formation" EXACT [OBOL:automatic] synonym: "embryonic development, heart tube anterior/posterior pattern formation" EXACT [OBOL:automatic] ! seconds spent parsing GO:0035054: 21.68 ! parse: GO:0035063 using "nuclear speck organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0016607]) [-2] ! parse: GO:0035063 using "nuclear speckle assembly" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0016607]) [-2] ! parse: GO:0035063 using "nuclear speckle organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0016607]) [-2] ! no existing xp def ! def: "A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of nuclear specks, a class of nuclear body in which splicing factors are localized." ! PROPOSED: cellular component assembly that OBO_REL:results_in_creation_of nuclear speck [cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0016607])] [Term] id: GO:0035063 ! nuclear speck organization and biogenesis intersection_of: GO:0022607 ! cellular component assembly intersection_of: OBO_REL:results_in_creation_of GO:0016607 ! nuclear speck synonym: "assembly and maintenance of nuclear speck" EXACT [OBOL:automatic] synonym: "assembly and maintenance of nuclear speckle" EXACT [OBOL:automatic] synonym: "assembly and maintenance of nuclear speckles" EXACT [OBOL:automatic] synonym: "assembly and maintenance of speckle focus" EXACT [OBOL:automatic] synonym: "assembly and maintenance of splicing speckle" EXACT [OBOL:automatic] synonym: "assembly of nuclear speck" EXACT [OBOL:automatic] synonym: "assembly of nuclear speckle" EXACT [OBOL:automatic] synonym: "assembly of nuclear speckles" EXACT [OBOL:automatic] synonym: "assembly of speckle focus" EXACT [OBOL:automatic] synonym: "assembly of splicing speckle" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of nuclear speck" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of nuclear speckle" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of nuclear speckles" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of speckle focus" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of splicing speckle" EXACT [OBOL:automatic] synonym: "biogenesis of nuclear speck" EXACT [OBOL:automatic] synonym: "biogenesis of nuclear speckle" EXACT [OBOL:automatic] synonym: "biogenesis of nuclear speckles" EXACT [OBOL:automatic] synonym: "biogenesis of speckle focus" EXACT [OBOL:automatic] synonym: "biogenesis of splicing speckle" EXACT [OBOL:automatic] synonym: "cell structure assembly of nuclear speck" EXACT [OBOL:automatic] synonym: "cell structure assembly of nuclear speckle" EXACT [OBOL:automatic] synonym: "cell structure assembly of nuclear speckles" EXACT [OBOL:automatic] synonym: "cell structure assembly of speckle focus" EXACT [OBOL:automatic] synonym: "cell structure assembly of splicing speckle" EXACT [OBOL:automatic] synonym: "cellular component assembly of nuclear speck" EXACT [OBOL:automatic] synonym: "cellular component assembly of nuclear speckle" EXACT [OBOL:automatic] synonym: "cellular component assembly of nuclear speckles" EXACT [OBOL:automatic] synonym: "cellular component assembly of speckle focus" EXACT [OBOL:automatic] synonym: "cellular component assembly of splicing speckle" EXACT [OBOL:automatic] synonym: "complex assembly of nuclear speck" EXACT [OBOL:automatic] synonym: "complex assembly of nuclear speckle" EXACT [OBOL:automatic] synonym: "complex assembly of nuclear speckles" EXACT [OBOL:automatic] synonym: "complex assembly of speckle focus" EXACT [OBOL:automatic] synonym: "complex assembly of splicing speckle" EXACT [OBOL:automatic] synonym: "formation of nuclear speck" EXACT [OBOL:automatic] synonym: "formation of nuclear speckle" EXACT [OBOL:automatic] synonym: "formation of nuclear speckles" EXACT [OBOL:automatic] synonym: "formation of speckle focus" EXACT [OBOL:automatic] synonym: "formation of splicing speckle" EXACT [OBOL:automatic] synonym: "nuclear speck assembly" EXACT [OBOL:automatic] synonym: "nuclear speck assembly and maintenance" EXACT [OBOL:automatic] synonym: "nuclear speck biogenesis" EXACT [OBOL:automatic] synonym: "nuclear speck biogenesis and assembly" EXACT [OBOL:automatic] synonym: "nuclear speck cell structure assembly" EXACT [OBOL:automatic] synonym: "nuclear speck cellular component assembly" EXACT [OBOL:automatic] synonym: "nuclear speck complex assembly" EXACT [OBOL:automatic] synonym: "nuclear speck formation" EXACT [OBOL:automatic] synonym: "nuclear speckle assembly and maintenance" EXACT [OBOL:automatic] synonym: "nuclear speckle biogenesis" EXACT [OBOL:automatic] synonym: "nuclear speckle biogenesis and assembly" EXACT [OBOL:automatic] synonym: "nuclear speckle cell structure assembly" EXACT [OBOL:automatic] synonym: "nuclear speckle cellular component assembly" EXACT [OBOL:automatic] synonym: "nuclear speckle complex assembly" EXACT [OBOL:automatic] synonym: "nuclear speckle formation" EXACT [OBOL:automatic] synonym: "nuclear speckles assembly" EXACT [OBOL:automatic] synonym: "nuclear speckles assembly and maintenance" EXACT [OBOL:automatic] synonym: "nuclear speckles biogenesis" EXACT [OBOL:automatic] synonym: "nuclear speckles biogenesis and assembly" EXACT [OBOL:automatic] synonym: "nuclear speckles cell structure assembly" EXACT [OBOL:automatic] synonym: "nuclear speckles cellular component assembly" EXACT [OBOL:automatic] synonym: "nuclear speckles complex assembly" EXACT [OBOL:automatic] synonym: "nuclear speckles formation" EXACT [OBOL:automatic] synonym: "speckle focus assembly" EXACT [OBOL:automatic] synonym: "speckle focus assembly and maintenance" EXACT [OBOL:automatic] synonym: "speckle focus biogenesis" EXACT [OBOL:automatic] synonym: "speckle focus biogenesis and assembly" EXACT [OBOL:automatic] synonym: "speckle focus cell structure assembly" EXACT [OBOL:automatic] synonym: "speckle focus cellular component assembly" EXACT [OBOL:automatic] synonym: "speckle focus complex assembly" EXACT [OBOL:automatic] synonym: "speckle focus formation" EXACT [OBOL:automatic] synonym: "splicing speckle assembly" EXACT [OBOL:automatic] synonym: "splicing speckle assembly and maintenance" EXACT [OBOL:automatic] synonym: "splicing speckle biogenesis" EXACT [OBOL:automatic] synonym: "splicing speckle biogenesis and assembly" EXACT [OBOL:automatic] synonym: "splicing speckle cell structure assembly" EXACT [OBOL:automatic] synonym: "splicing speckle cellular component assembly" EXACT [OBOL:automatic] synonym: "splicing speckle complex assembly" EXACT [OBOL:automatic] synonym: "splicing speckle formation" EXACT [OBOL:automatic] def: "The aggregation and bonding together of a set of macromolecules to form a nuclear speck" [OBOL:automatic] ! seconds spent parsing GO:0035063: 22.53 ! parse: GO:0035069 using "larval midgut histolysis" => cdef(GO:0007559, [OBO_REL:results_in_developmental_progression_of=FBbt:00005825]) [-2] ! no existing xp def ! def: "The stage-specific break down of the larval midgut during Drosophila metamorphosis, to allow replacement of larval structures by tissues and structures that form the adult fly." ! PROPOSED: histolysis that OBO_REL:results_in_developmental_progression_of larval midgut [cdef(GO:0007559, [OBO_REL:results_in_developmental_progression_of=FBbt:00005825])] [Term] id: GO:0035069 ! larval midgut histolysis intersection_of: GO:0007559 ! histolysis intersection_of: OBO_REL:results_in_developmental_progression_of FBbt:00005825 ! larval midgut ! seconds spent parsing GO:0035069: 9.29 ! parse: GO:0035070 using "salivary gland histolysis" => cdef(GO:0007559, [OBO_REL:results_in_developmental_progression_of=FBbt:00005382]) [-2] ! parse: GO:0035070 using "salivary gland histolysis" => cdef(GO:0007559, [OBO_REL:results_in_developmental_progression_of=MA:0000346]) [-2] ! no existing xp def ! def: "The stage-specific break down of the larval salivary glands during Drosophila metamorphosis, to allow replacement of larval structures by tissues and structures that form the adult fly." ! PROPOSED: histolysis that OBO_REL:results_in_developmental_progression_of salivary gland [cdef(GO:0007559, [OBO_REL:results_in_developmental_progression_of=MA:0000346])] [Term] id: GO:0035070 ! salivary gland histolysis intersection_of: GO:0007559 ! histolysis intersection_of: OBO_REL:results_in_developmental_progression_of MA:0000346 ! salivary gland ! seconds spent parsing GO:0035070: 6.21 ! parse: GO:0035071 using "salivary gland cell autophagic cell death" => cdef(GO:0008219, [OBO_REL:part_of=GO:0006914, OBO_REL:unfolds_in=cdef(ZFA:0009000, [OBO_REL:part_of=FBbt:00005382])]) [-4] ! parse: GO:0035071 using "salivary gland cell autophagic cell death" => cdef(GO:0008219, [OBO_REL:part_of=GO:0006914, OBO_REL:unfolds_in=cdef(ZFA:0009000, [OBO_REL:part_of=MA:0000346])]) [-4] ! parse: GO:0035071 using "salivary gland cell autophagic cell death" => cdef(GO:0008219, [OBO_REL:results_in_developmental_progression_of=anon(autophagic, anatomy), OBO_REL:unfolds_in=cdef(ZFA:0009000, [OBO_REL:part_of=FBbt:00005382])]) [-13] ! parse: GO:0035071 using "salivary gland cell autophagic cell death" => cdef(GO:0008219, [OBO_REL:results_in_developmental_progression_of=anon(autophagic, anatomy), OBO_REL:unfolds_in=cdef(ZFA:0009000, [OBO_REL:part_of=MA:0000346])]) [-13] ! parse: GO:0035071 using "salivary gland cell autophagic cell death" => cdef(GO:0008219, [and=part_of(GO:0006914)/unfolds_in(CL:0000000), OBO_REL:unfolds_in=FBbt:00005382]) [-3] ! parse: GO:0035071 using "salivary gland cell autophagic cell death" => cdef(GO:0008219, [and=part_of(GO:0006914)/unfolds_in(CL:0000000), OBO_REL:unfolds_in=MA:0000346]) [-3] ! parse: GO:0035071 using "salivary gland cell autophagic cell death" => cdef(GO:0008219, [and=part_of(GO:0006914)/unfolds_in(ZFA:0009000), OBO_REL:unfolds_in=FBbt:00005382]) [-3] ! parse: GO:0035071 using "salivary gland cell autophagic cell death" => cdef(GO:0008219, [and=part_of(GO:0006914)/unfolds_in(ZFA:0009000), OBO_REL:unfolds_in=MA:0000346]) [-3] ! parse: GO:0035071 using "salivary gland cell autophagic cell death" => cdef(GO:0008219, [and=results_in_developmental_progression_of(anon(autophagic, anatomy))/unfolds_in(CL:0000000), OBO_REL:unfolds_in=FBbt:00005382]) [-3] ! parse: GO:0035071 using "salivary gland cell autophagic cell death" => cdef(GO:0008219, [and=results_in_developmental_progression_of(anon(autophagic, anatomy))/unfolds_in(CL:0000000), OBO_REL:unfolds_in=MA:0000346]) [-3] ! parse: GO:0035071 using "salivary gland cell autophagic cell death" => cdef(GO:0008219, [and=results_in_developmental_progression_of(anon(autophagic, anatomy))/unfolds_in(ZFA:0009000), OBO_REL:unfolds_in=FBbt:00005382]) [-3] ! parse: GO:0035071 using "salivary gland cell autophagic cell death" => cdef(GO:0008219, [and=results_in_developmental_progression_of(anon(autophagic, anatomy))/unfolds_in(ZFA:0009000), OBO_REL:unfolds_in=MA:0000346]) [-3] ! parse: GO:0035071 using "salivary gland cell autophagic cell death" => cdef(GO:0016265, [OBO_REL:results_in_developmental_progression_of=anon(autophagic cell, anatomy), OBO_REL:unfolds_in=cdef(ZFA:0009000, [OBO_REL:part_of=FBbt:00005382])]) [-18] ! parse: GO:0035071 using "salivary gland cell autophagic cell death" => cdef(GO:0016265, [OBO_REL:results_in_developmental_progression_of=anon(autophagic cell, anatomy), OBO_REL:unfolds_in=cdef(ZFA:0009000, [OBO_REL:part_of=MA:0000346])]) [-18] ! parse: GO:0035071 using "salivary gland cell autophagic cell death" => cdef(GO:0016265, [and=results_in_developmental_progression_of(anon(autophagic cell, anatomy))/unfolds_in(CL:0000000), OBO_REL:unfolds_in=FBbt:00005382]) [-3] ! parse: GO:0035071 using "salivary gland cell autophagic cell death" => cdef(GO:0016265, [and=results_in_developmental_progression_of(anon(autophagic cell, anatomy))/unfolds_in(CL:0000000), OBO_REL:unfolds_in=MA:0000346]) [-3] ! parse: GO:0035071 using "salivary gland cell autophagic cell death" => cdef(GO:0016265, [and=results_in_developmental_progression_of(anon(autophagic cell, anatomy))/unfolds_in(ZFA:0009000), OBO_REL:unfolds_in=FBbt:00005382]) [-3] ! parse: GO:0035071 using "salivary gland cell autophagic cell death" => cdef(GO:0016265, [and=results_in_developmental_progression_of(anon(autophagic cell, anatomy))/unfolds_in(ZFA:0009000), OBO_REL:unfolds_in=MA:0000346]) [-3] ! parse: GO:0035071 using "salivary gland cell autophagic cell death" => cdef(GO:0048102, [OBO_REL:results_in_death_of=CL:0000000, OBO_REL:unfolds_in=FBbt:00005382]) [-3] ! parse: GO:0035071 using "salivary gland cell autophagic cell death" => cdef(GO:0048102, [OBO_REL:results_in_death_of=CL:0000000, OBO_REL:unfolds_in=MA:0000346]) [-3] ! parse: GO:0035071 using "salivary gland cell autophagic cell death" => cdef(GO:0048102, [OBO_REL:results_in_developmental_progression_of=CL:0000000, OBO_REL:unfolds_in=FBbt:00005382]) [-3] ! parse: GO:0035071 using "salivary gland cell autophagic cell death" => cdef(GO:0048102, [OBO_REL:results_in_developmental_progression_of=CL:0000000, OBO_REL:unfolds_in=MA:0000346]) [-3] ! parse: GO:0035071 using "salivary gland cell autophagic cell death" => cdef(GO:0048102, [OBO_REL:results_in_developmental_progression_of=ZFA:0009000, OBO_REL:unfolds_in=FBbt:00005382]) [-3] ! parse: GO:0035071 using "salivary gland cell autophagic cell death" => cdef(GO:0048102, [OBO_REL:results_in_developmental_progression_of=ZFA:0009000, OBO_REL:unfolds_in=MA:0000346]) [-3] ! parse: GO:0035071 using "salivary gland cell autophagic cell death" => cdef(GO:0048102, [OBO_REL:results_in_developmental_progression_of=cdef(ZFA:0009000, [OBO_REL:part_of=FBbt:00005382])]) [-3] ! parse: GO:0035071 using "salivary gland cell autophagic cell death" => cdef(GO:0048102, [OBO_REL:results_in_developmental_progression_of=cdef(ZFA:0009000, [OBO_REL:part_of=MA:0000346])]) [-3] ! parse: GO:0035071 using "salivary gland cell autophagic cell death" => cdef(cdef(GO:0016265, [OBO_REL:results_in_developmental_progression_of=CL:0000000]), [OBO_REL:part_of=GO:0006914, OBO_REL:unfolds_in=cdef(ZFA:0009000, [OBO_REL:part_of=FBbt:00005382])]) [-5] ! parse: GO:0035071 using "salivary gland cell autophagic cell death" => cdef(cdef(GO:0016265, [OBO_REL:results_in_developmental_progression_of=CL:0000000]), [OBO_REL:part_of=GO:0006914, OBO_REL:unfolds_in=cdef(ZFA:0009000, [OBO_REL:part_of=MA:0000346])]) [-5] ! parse: GO:0035071 using "salivary gland cell autophagic cell death" => cdef(cdef(GO:0016265, [OBO_REL:results_in_developmental_progression_of=CL:0000000]), [and=part_of(GO:0006914)/unfolds_in(CL:0000000), OBO_REL:unfolds_in=FBbt:00005382]) [-4] ! parse: GO:0035071 using "salivary gland cell autophagic cell death" => cdef(cdef(GO:0016265, [OBO_REL:results_in_developmental_progression_of=CL:0000000]), [and=part_of(GO:0006914)/unfolds_in(CL:0000000), OBO_REL:unfolds_in=MA:0000346]) [-4] ! parse: GO:0035071 using "salivary gland cell autophagic cell death" => cdef(cdef(GO:0016265, [OBO_REL:results_in_developmental_progression_of=CL:0000000]), [and=part_of(GO:0006914)/unfolds_in(ZFA:0009000), OBO_REL:unfolds_in=FBbt:00005382]) [-4] ! parse: GO:0035071 using "salivary gland cell autophagic cell death" => cdef(cdef(GO:0016265, [OBO_REL:results_in_developmental_progression_of=CL:0000000]), [and=part_of(GO:0006914)/unfolds_in(ZFA:0009000), OBO_REL:unfolds_in=MA:0000346]) [-4] ! parse: GO:0035071 using "salivary gland cell autophagic cell death" => cdef(cdef(GO:0016265, [OBO_REL:results_in_developmental_progression_of=ZFA:0009000]), [OBO_REL:part_of=GO:0006914, OBO_REL:unfolds_in=cdef(ZFA:0009000, [OBO_REL:part_of=FBbt:00005382])]) [-5] ! parse: GO:0035071 using "salivary gland cell autophagic cell death" => cdef(cdef(GO:0016265, [OBO_REL:results_in_developmental_progression_of=ZFA:0009000]), [OBO_REL:part_of=GO:0006914, OBO_REL:unfolds_in=cdef(ZFA:0009000, [OBO_REL:part_of=MA:0000346])]) [-5] ! parse: GO:0035071 using "salivary gland cell autophagic cell death" => cdef(cdef(GO:0016265, [OBO_REL:results_in_developmental_progression_of=ZFA:0009000]), [and=part_of(GO:0006914)/unfolds_in(CL:0000000), OBO_REL:unfolds_in=FBbt:00005382]) [-4] ! parse: GO:0035071 using "salivary gland cell autophagic cell death" => cdef(cdef(GO:0016265, [OBO_REL:results_in_developmental_progression_of=ZFA:0009000]), [and=part_of(GO:0006914)/unfolds_in(CL:0000000), OBO_REL:unfolds_in=MA:0000346]) [-4] ! parse: GO:0035071 using "salivary gland cell autophagic cell death" => cdef(cdef(GO:0016265, [OBO_REL:results_in_developmental_progression_of=ZFA:0009000]), [and=part_of(GO:0006914)/unfolds_in(ZFA:0009000), OBO_REL:unfolds_in=FBbt:00005382]) [-4] ! parse: GO:0035071 using "salivary gland cell autophagic cell death" => cdef(cdef(GO:0016265, [OBO_REL:results_in_developmental_progression_of=ZFA:0009000]), [and=part_of(GO:0006914)/unfolds_in(ZFA:0009000), OBO_REL:unfolds_in=MA:0000346]) [-4] ! parse: GO:0035071 using "salivary gland cell death" => cdef(GO:0008219, [OBO_REL:results_in_developmental_progression_of=FBbt:00005382]) [-2] ! parse: GO:0035071 using "salivary gland cell death" => cdef(GO:0008219, [OBO_REL:results_in_developmental_progression_of=MA:0000346]) [-2] ! parse: GO:0035071 using "salivary gland cell death" => cdef(GO:0016265, [OBO_REL:results_in_developmental_progression_of=CL:0000000, OBO_REL:unfolds_in=FBbt:00005382]) [-3] ! parse: GO:0035071 using "salivary gland cell death" => cdef(GO:0016265, [OBO_REL:results_in_developmental_progression_of=CL:0000000, OBO_REL:unfolds_in=MA:0000346]) [-3] ! parse: GO:0035071 using "salivary gland cell death" => cdef(GO:0016265, [OBO_REL:results_in_developmental_progression_of=ZFA:0009000, OBO_REL:unfolds_in=FBbt:00005382]) [-3] ! parse: GO:0035071 using "salivary gland cell death" => cdef(GO:0016265, [OBO_REL:results_in_developmental_progression_of=ZFA:0009000, OBO_REL:unfolds_in=MA:0000346]) [-3] ! parse: GO:0035071 using "salivary gland cell death" => cdef(GO:0016265, [OBO_REL:results_in_developmental_progression_of=cdef(ZFA:0009000, [OBO_REL:part_of=FBbt:00005382])]) [-3] ! parse: GO:0035071 using "salivary gland cell death" => cdef(GO:0016265, [OBO_REL:results_in_developmental_progression_of=cdef(ZFA:0009000, [OBO_REL:part_of=MA:0000346])]) [-3] ! parse: GO:0035071 using "salivary gland cell programmed cell death by autophagy" => cdef(GO:0012501, [OBO_REL:has_enabler=GO:0006914, OBO_REL:unfolds_in=cdef(ZFA:0009000, [OBO_REL:part_of=FBbt:00005382])]) [-4] ! parse: GO:0035071 using "salivary gland cell programmed cell death by autophagy" => cdef(GO:0012501, [OBO_REL:has_enabler=GO:0006914, OBO_REL:unfolds_in=cdef(ZFA:0009000, [OBO_REL:part_of=MA:0000346])]) [-4] ! parse: GO:0035071 using "salivary gland cell programmed cell death by autophagy" => cdef(GO:0012501, [and=has_enabler(GO:0006914)/unfolds_in(CL:0000000), OBO_REL:unfolds_in=FBbt:00005382]) [-3] ! parse: GO:0035071 using "salivary gland cell programmed cell death by autophagy" => cdef(GO:0012501, [and=has_enabler(GO:0006914)/unfolds_in(CL:0000000), OBO_REL:unfolds_in=MA:0000346]) [-3] ! parse: GO:0035071 using "salivary gland cell programmed cell death by autophagy" => cdef(GO:0012501, [and=has_enabler(GO:0006914)/unfolds_in(ZFA:0009000), OBO_REL:unfolds_in=FBbt:00005382]) [-3] ! parse: GO:0035071 using "salivary gland cell programmed cell death by autophagy" => cdef(GO:0012501, [and=has_enabler(GO:0006914)/unfolds_in(ZFA:0009000), OBO_REL:unfolds_in=MA:0000346]) [-3] ! parse: GO:0035071 using "salivary gland cell programmed cell death by autophagy" => cdef(GO:0048102, [OBO_REL:results_in_death_of=CL:0000000, OBO_REL:unfolds_in=FBbt:00005382]) [-3] ! parse: GO:0035071 using "salivary gland cell programmed cell death by autophagy" => cdef(GO:0048102, [OBO_REL:results_in_death_of=CL:0000000, OBO_REL:unfolds_in=MA:0000346]) [-3] ! parse: GO:0035071 using "salivary gland cell programmed cell death by autophagy" => cdef(GO:0048102, [OBO_REL:results_in_developmental_progression_of=CL:0000000, OBO_REL:unfolds_in=FBbt:00005382]) [-3] ! parse: GO:0035071 using "salivary gland cell programmed cell death by autophagy" => cdef(GO:0048102, [OBO_REL:results_in_developmental_progression_of=CL:0000000, OBO_REL:unfolds_in=MA:0000346]) [-3] ! parse: GO:0035071 using "salivary gland cell programmed cell death by autophagy" => cdef(GO:0048102, [OBO_REL:results_in_developmental_progression_of=ZFA:0009000, OBO_REL:unfolds_in=FBbt:00005382]) [-3] ! parse: GO:0035071 using "salivary gland cell programmed cell death by autophagy" => cdef(GO:0048102, [OBO_REL:results_in_developmental_progression_of=ZFA:0009000, OBO_REL:unfolds_in=MA:0000346]) [-3] ! parse: GO:0035071 using "salivary gland cell programmed cell death by autophagy" => cdef(GO:0048102, [OBO_REL:results_in_developmental_progression_of=cdef(ZFA:0009000, [OBO_REL:part_of=FBbt:00005382])]) [-3] ! parse: GO:0035071 using "salivary gland cell programmed cell death by autophagy" => cdef(GO:0048102, [OBO_REL:results_in_developmental_progression_of=cdef(ZFA:0009000, [OBO_REL:part_of=MA:0000346])]) [-3] ! parse: GO:0035071 using "salivary gland cell programmed cell death by autophagy" => cdef(cdef(GO:0008219, [OBO_REL:results_in_developmental_progression_of=anon(programmed, anatomy)]), [OBO_REL:has_enabler=GO:0006914, OBO_REL:unfolds_in=cdef(ZFA:0009000, [OBO_REL:part_of=FBbt:00005382])]) [-14] ! parse: GO:0035071 using "salivary gland cell programmed cell death by autophagy" => cdef(cdef(GO:0008219, [OBO_REL:results_in_developmental_progression_of=anon(programmed, anatomy)]), [OBO_REL:has_enabler=GO:0006914, OBO_REL:unfolds_in=cdef(ZFA:0009000, [OBO_REL:part_of=MA:0000346])]) [-14] ! parse: GO:0035071 using "salivary gland cell programmed cell death by autophagy" => cdef(cdef(GO:0008219, [OBO_REL:results_in_developmental_progression_of=anon(programmed, anatomy)]), [and=has_enabler(GO:0006914)/unfolds_in(CL:0000000), OBO_REL:unfolds_in=FBbt:00005382]) [-13] ! parse: GO:0035071 using "salivary gland cell programmed cell death by autophagy" => cdef(cdef(GO:0008219, [OBO_REL:results_in_developmental_progression_of=anon(programmed, anatomy)]), [and=has_enabler(GO:0006914)/unfolds_in(CL:0000000), OBO_REL:unfolds_in=MA:0000346]) [-13] ! parse: GO:0035071 using "salivary gland cell programmed cell death by autophagy" => cdef(cdef(GO:0008219, [OBO_REL:results_in_developmental_progression_of=anon(programmed, anatomy)]), [and=has_enabler(GO:0006914)/unfolds_in(ZFA:0009000), OBO_REL:unfolds_in=FBbt:00005382]) [-13] ! parse: GO:0035071 using "salivary gland cell programmed cell death by autophagy" => cdef(cdef(GO:0008219, [OBO_REL:results_in_developmental_progression_of=anon(programmed, anatomy)]), [and=has_enabler(GO:0006914)/unfolds_in(ZFA:0009000), OBO_REL:unfolds_in=MA:0000346]) [-13] ! parse: GO:0035071 using "salivary gland cell programmed cell death by autophagy" => cdef(cdef(GO:0008219, [OBO_REL:results_in_developmental_progression_of=anon(programmed, anatomy), OBO_REL:unfolds_in=CL:0000000]), [OBO_REL:has_enabler=GO:0006914, OBO_REL:unfolds_in=FBbt:00005382]) [-14] ! parse: GO:0035071 using "salivary gland cell programmed cell death by autophagy" => cdef(cdef(GO:0008219, [OBO_REL:results_in_developmental_progression_of=anon(programmed, anatomy), OBO_REL:unfolds_in=CL:0000000]), [OBO_REL:has_enabler=GO:0006914, OBO_REL:unfolds_in=MA:0000346]) [-14] ! parse: GO:0035071 using "salivary gland cell programmed cell death by autophagy" => cdef(cdef(GO:0008219, [OBO_REL:results_in_developmental_progression_of=anon(programmed, anatomy), OBO_REL:unfolds_in=ZFA:0009000]), [OBO_REL:has_enabler=GO:0006914, OBO_REL:unfolds_in=FBbt:00005382]) [-14] ! parse: GO:0035071 using "salivary gland cell programmed cell death by autophagy" => cdef(cdef(GO:0008219, [OBO_REL:results_in_developmental_progression_of=anon(programmed, anatomy), OBO_REL:unfolds_in=ZFA:0009000]), [OBO_REL:has_enabler=GO:0006914, OBO_REL:unfolds_in=MA:0000346]) [-14] ! parse: GO:0035071 using "salivary gland cell programmed cell death by autophagy" => cdef(cdef(GO:0008219, [OBO_REL:results_in_developmental_progression_of=anon(programmed, anatomy), OBO_REL:unfolds_in=cdef(ZFA:0009000, [OBO_REL:part_of=FBbt:00005382])]), [OBO_REL:has_enabler=GO:0006914]) [-14] ! parse: GO:0035071 using "salivary gland cell programmed cell death by autophagy" => cdef(cdef(GO:0008219, [OBO_REL:results_in_developmental_progression_of=anon(programmed, anatomy), OBO_REL:unfolds_in=cdef(ZFA:0009000, [OBO_REL:part_of=MA:0000346])]), [OBO_REL:has_enabler=GO:0006914]) [-14] ! parse: GO:0035071 using "salivary gland cell programmed cell death by autophagy" => cdef(cdef(GO:0008219, [and=results_in_developmental_progression_of(anon(programmed, anatomy))/unfolds_in(CL:0000000), OBO_REL:unfolds_in=FBbt:00005382]), [OBO_REL:has_enabler=GO:0006914]) [-4] ! parse: GO:0035071 using "salivary gland cell programmed cell death by autophagy" => cdef(cdef(GO:0008219, [and=results_in_developmental_progression_of(anon(programmed, anatomy))/unfolds_in(CL:0000000), OBO_REL:unfolds_in=MA:0000346]), [OBO_REL:has_enabler=GO:0006914]) [-4] ! parse: GO:0035071 using "salivary gland cell programmed cell death by autophagy" => cdef(cdef(GO:0008219, [and=results_in_developmental_progression_of(anon(programmed, anatomy))/unfolds_in(ZFA:0009000), OBO_REL:unfolds_in=FBbt:00005382]), [OBO_REL:has_enabler=GO:0006914]) [-4] ! parse: GO:0035071 using "salivary gland cell programmed cell death by autophagy" => cdef(cdef(GO:0008219, [and=results_in_developmental_progression_of(anon(programmed, anatomy))/unfolds_in(ZFA:0009000), OBO_REL:unfolds_in=MA:0000346]), [OBO_REL:has_enabler=GO:0006914]) [-4] ! parse: GO:0035071 using "salivary gland cell programmed cell death by autophagy" => cdef(cdef(GO:0012501, [OBO_REL:results_in_death_of=CL:0000000]), [OBO_REL:has_enabler=GO:0006914, OBO_REL:unfolds_in=FBbt:00005382]) [-4] ! parse: GO:0035071 using "salivary gland cell programmed cell death by autophagy" => cdef(cdef(GO:0012501, [OBO_REL:results_in_death_of=CL:0000000]), [OBO_REL:has_enabler=GO:0006914, OBO_REL:unfolds_in=MA:0000346]) [-4] ! parse: GO:0035071 using "salivary gland cell programmed cell death by autophagy" => cdef(cdef(GO:0012501, [OBO_REL:results_in_death_of=CL:0000000, OBO_REL:unfolds_in=FBbt:00005382]), [OBO_REL:has_enabler=GO:0006914]) [-4] ! parse: GO:0035071 using "salivary gland cell programmed cell death by autophagy" => cdef(cdef(GO:0012501, [OBO_REL:results_in_death_of=CL:0000000, OBO_REL:unfolds_in=MA:0000346]), [OBO_REL:has_enabler=GO:0006914]) [-4] ! parse: GO:0035071 using "salivary gland cell programmed cell death by autophagy" => cdef(cdef(GO:0012501, [OBO_REL:results_in_developmental_progression_of=CL:0000000]), [OBO_REL:has_enabler=GO:0006914, OBO_REL:unfolds_in=FBbt:00005382]) [-4] ! parse: GO:0035071 using "salivary gland cell programmed cell death by autophagy" => cdef(cdef(GO:0012501, [OBO_REL:results_in_developmental_progression_of=CL:0000000]), [OBO_REL:has_enabler=GO:0006914, OBO_REL:unfolds_in=MA:0000346]) [-4] ! parse: GO:0035071 using "salivary gland cell programmed cell death by autophagy" => cdef(cdef(GO:0012501, [OBO_REL:results_in_developmental_progression_of=CL:0000000, OBO_REL:unfolds_in=FBbt:00005382]), [OBO_REL:has_enabler=GO:0006914]) [-4] ! parse: GO:0035071 using "salivary gland cell programmed cell death by autophagy" => cdef(cdef(GO:0012501, [OBO_REL:results_in_developmental_progression_of=CL:0000000, OBO_REL:unfolds_in=MA:0000346]), [OBO_REL:has_enabler=GO:0006914]) [-4] ! parse: GO:0035071 using "salivary gland cell programmed cell death by autophagy" => cdef(cdef(GO:0012501, [OBO_REL:results_in_developmental_progression_of=ZFA:0009000]), [OBO_REL:has_enabler=GO:0006914, OBO_REL:unfolds_in=FBbt:00005382]) [-4] ! parse: GO:0035071 using "salivary gland cell programmed cell death by autophagy" => cdef(cdef(GO:0012501, [OBO_REL:results_in_developmental_progression_of=ZFA:0009000]), [OBO_REL:has_enabler=GO:0006914, OBO_REL:unfolds_in=MA:0000346]) [-4] ! parse: GO:0035071 using "salivary gland cell programmed cell death by autophagy" => cdef(cdef(GO:0012501, [OBO_REL:results_in_developmental_progression_of=ZFA:0009000, OBO_REL:unfolds_in=FBbt:00005382]), [OBO_REL:has_enabler=GO:0006914]) [-4] ! parse: GO:0035071 using "salivary gland cell programmed cell death by autophagy" => cdef(cdef(GO:0012501, [OBO_REL:results_in_developmental_progression_of=ZFA:0009000, OBO_REL:unfolds_in=MA:0000346]), [OBO_REL:has_enabler=GO:0006914]) [-4] ! parse: GO:0035071 using "salivary gland cell programmed cell death by autophagy" => cdef(cdef(GO:0012501, [OBO_REL:results_in_developmental_progression_of=cdef(ZFA:0009000, [OBO_REL:part_of=FBbt:00005382])]), [OBO_REL:has_enabler=GO:0006914]) [-4] ! parse: GO:0035071 using "salivary gland cell programmed cell death by autophagy" => cdef(cdef(GO:0012501, [OBO_REL:results_in_developmental_progression_of=cdef(ZFA:0009000, [OBO_REL:part_of=MA:0000346])]), [OBO_REL:has_enabler=GO:0006914]) [-4] ! parse: GO:0035071 using "salivary gland cell programmed cell death by autophagy" => cdef(cdef(GO:0016265, [OBO_REL:results_in_developmental_progression_of=anon(programmed cell, anatomy)]), [OBO_REL:has_enabler=GO:0006914, OBO_REL:unfolds_in=cdef(ZFA:0009000, [OBO_REL:part_of=FBbt:00005382])]) [-19] ! parse: GO:0035071 using "salivary gland cell programmed cell death by autophagy" => cdef(cdef(GO:0016265, [OBO_REL:results_in_developmental_progression_of=anon(programmed cell, anatomy)]), [OBO_REL:has_enabler=GO:0006914, OBO_REL:unfolds_in=cdef(ZFA:0009000, [OBO_REL:part_of=MA:0000346])]) [-19] ! parse: GO:0035071 using "salivary gland cell programmed cell death by autophagy" => cdef(cdef(GO:0016265, [OBO_REL:results_in_developmental_progression_of=anon(programmed cell, anatomy)]), [and=has_enabler(GO:0006914)/unfolds_in(CL:0000000), OBO_REL:unfolds_in=FBbt:00005382]) [-18] ! parse: GO:0035071 using "salivary gland cell programmed cell death by autophagy" => cdef(cdef(GO:0016265, [OBO_REL:results_in_developmental_progression_of=anon(programmed cell, anatomy)]), [and=has_enabler(GO:0006914)/unfolds_in(CL:0000000), OBO_REL:unfolds_in=MA:0000346]) [-18] ! parse: GO:0035071 using "salivary gland cell programmed cell death by autophagy" => cdef(cdef(GO:0016265, [OBO_REL:results_in_developmental_progression_of=anon(programmed cell, anatomy)]), [and=has_enabler(GO:0006914)/unfolds_in(ZFA:0009000), OBO_REL:unfolds_in=FBbt:00005382]) [-18] ! parse: GO:0035071 using "salivary gland cell programmed cell death by autophagy" => cdef(cdef(GO:0016265, [OBO_REL:results_in_developmental_progression_of=anon(programmed cell, anatomy)]), [and=has_enabler(GO:0006914)/unfolds_in(ZFA:0009000), OBO_REL:unfolds_in=MA:0000346]) [-18] ! parse: GO:0035071 using "salivary gland cell programmed cell death by autophagy" => cdef(cdef(GO:0016265, [OBO_REL:results_in_developmental_progression_of=anon(programmed cell, anatomy), OBO_REL:unfolds_in=CL:0000000]), [OBO_REL:has_enabler=GO:0006914, OBO_REL:unfolds_in=FBbt:00005382]) [-19] ! parse: GO:0035071 using "salivary gland cell programmed cell death by autophagy" => cdef(cdef(GO:0016265, [OBO_REL:results_in_developmental_progression_of=anon(programmed cell, anatomy), OBO_REL:unfolds_in=CL:0000000]), [OBO_REL:has_enabler=GO:0006914, OBO_REL:unfolds_in=MA:0000346]) [-19] ! parse: GO:0035071 using "salivary gland cell programmed cell death by autophagy" => cdef(cdef(GO:0016265, [OBO_REL:results_in_developmental_progression_of=anon(programmed cell, anatomy), OBO_REL:unfolds_in=ZFA:0009000]), [OBO_REL:has_enabler=GO:0006914, OBO_REL:unfolds_in=FBbt:00005382]) [-19] ! parse: GO:0035071 using "salivary gland cell programmed cell death by autophagy" => cdef(cdef(GO:0016265, [OBO_REL:results_in_developmental_progression_of=anon(programmed cell, anatomy), OBO_REL:unfolds_in=ZFA:0009000]), [OBO_REL:has_enabler=GO:0006914, OBO_REL:unfolds_in=MA:0000346]) [-19] ! parse: GO:0035071 using "salivary gland cell programmed cell death by autophagy" => cdef(cdef(GO:0016265, [OBO_REL:results_in_developmental_progression_of=anon(programmed cell, anatomy), OBO_REL:unfolds_in=cdef(ZFA:0009000, [OBO_REL:part_of=FBbt:00005382])]), [OBO_REL:has_enabler=GO:0006914]) [-19] ! parse: GO:0035071 using "salivary gland cell programmed cell death by autophagy" => cdef(cdef(GO:0016265, [OBO_REL:results_in_developmental_progression_of=anon(programmed cell, anatomy), OBO_REL:unfolds_in=cdef(ZFA:0009000, [OBO_REL:part_of=MA:0000346])]), [OBO_REL:has_enabler=GO:0006914]) [-19] ! parse: GO:0035071 using "salivary gland cell programmed cell death by autophagy" => cdef(cdef(GO:0016265, [and=results_in_developmental_progression_of(anon(programmed cell, anatomy))/unfolds_in(CL:0000000), OBO_REL:unfolds_in=FBbt:00005382]), [OBO_REL:has_enabler=GO:0006914]) [-4] ! parse: GO:0035071 using "salivary gland cell programmed cell death by autophagy" => cdef(cdef(GO:0016265, [and=results_in_developmental_progression_of(anon(programmed cell, anatomy))/unfolds_in(CL:0000000), OBO_REL:unfolds_in=MA:0000346]), [OBO_REL:has_enabler=GO:0006914]) [-4] ! parse: GO:0035071 using "salivary gland cell programmed cell death by autophagy" => cdef(cdef(GO:0016265, [and=results_in_developmental_progression_of(anon(programmed cell, anatomy))/unfolds_in(ZFA:0009000), OBO_REL:unfolds_in=FBbt:00005382]), [OBO_REL:has_enabler=GO:0006914]) [-4] ! parse: GO:0035071 using "salivary gland cell programmed cell death by autophagy" => cdef(cdef(GO:0016265, [and=results_in_developmental_progression_of(anon(programmed cell, anatomy))/unfolds_in(ZFA:0009000), OBO_REL:unfolds_in=MA:0000346]), [OBO_REL:has_enabler=GO:0006914]) [-4] ! no existing xp def ! def: "The stage-specific programmed cell death of salivary gland cells during salivary gland histolysis." ! PROPOSED: cell death that OBO_REL:results_in_developmental_progression_of salivary gland [cdef(GO:0008219, [OBO_REL:results_in_developmental_progression_of=MA:0000346])] [Term] id: GO:0035071 ! salivary gland cell autophagic cell death intersection_of: GO:0008219 ! cell death intersection_of: OBO_REL:results_in_developmental_progression_of MA:0000346 ! salivary gland ! seconds spent parsing GO:0035071: 122.57 ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0035073 using "puparium biosynthesis" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=FBbt:00004987]) [-2] ! parse: GO:0035073 using "puparium formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=FBbt:00004987]) [-2] ! parse: GO:0035073 using "puparium formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=FBbt:00004987]) [-2] ! no existing xp def ! def: "The onset of prepupal development when the larval stops crawling, everts its spiracles and the larval cuticle becomes the puparium or pupal case that surrounds the organism for the duration of metamorphosis." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of puparium [cdef(GO:0048646, [OBO_REL:results_in_formation_of=FBbt:00004987])] [Term] id: GO:0035073 ! pupariation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of FBbt:00004987 ! puparium ! seconds spent parsing GO:0035073: 14.41 ! No parse for: GO:0035074 pupation ! No parse for: GO:0035079 polytene chromosome puffing ! parse: GO:0035082 using "axoneme biogenesis" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0005930]) [-2] ! no existing xp def ! def: "The assembly and organization of an axoneme, the bundle of microtubules and associated proteins that forms the core of cilia and flagella in eukaryotic cells and is responsible for their movements." ! PROPOSED: cellular component assembly that OBO_REL:results_in_creation_of axoneme [cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0005930])] [Term] id: GO:0035082 ! axoneme biogenesis intersection_of: GO:0022607 ! cellular component assembly intersection_of: OBO_REL:results_in_creation_of GO:0005930 ! axoneme synonym: "assembly and maintenance of axonemal motor activity" EXACT [OBOL:automatic] synonym: "assembly and maintenance of axoneme" EXACT [OBOL:automatic] synonym: "assembly of axonemal motor activity" EXACT [OBOL:automatic] synonym: "assembly of axoneme" EXACT [OBOL:automatic] synonym: "axonemal motor activity assembly" EXACT [OBOL:automatic] synonym: "axonemal motor activity assembly and maintenance" EXACT [OBOL:automatic] synonym: "axonemal motor activity biogenesis" EXACT [OBOL:automatic] synonym: "axonemal motor activity biogenesis and assembly" EXACT [OBOL:automatic] synonym: "axonemal motor activity cell structure assembly" EXACT [OBOL:automatic] synonym: "axonemal motor activity cellular component assembly" EXACT [OBOL:automatic] synonym: "axonemal motor activity complex assembly" EXACT [OBOL:automatic] synonym: "axonemal motor activity formation" EXACT [OBOL:automatic] synonym: "axoneme assembly" EXACT [OBOL:automatic] synonym: "axoneme assembly and maintenance" EXACT [OBOL:automatic] synonym: "axoneme biogenesis and assembly" EXACT [OBOL:automatic] synonym: "axoneme cell structure assembly" EXACT [OBOL:automatic] synonym: "axoneme cellular component assembly" EXACT [OBOL:automatic] synonym: "axoneme complex assembly" EXACT [OBOL:automatic] synonym: "axoneme formation" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of axonemal motor activity" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of axoneme" EXACT [OBOL:automatic] synonym: "biogenesis of axonemal motor activity" EXACT [OBOL:automatic] synonym: "biogenesis of axoneme" EXACT [OBOL:automatic] synonym: "cell structure assembly of axonemal motor activity" EXACT [OBOL:automatic] synonym: "cell structure assembly of axoneme" EXACT [OBOL:automatic] synonym: "cellular component assembly of axonemal motor activity" EXACT [OBOL:automatic] synonym: "cellular component assembly of axoneme" EXACT [OBOL:automatic] synonym: "complex assembly of axonemal motor activity" EXACT [OBOL:automatic] synonym: "complex assembly of axoneme" EXACT [OBOL:automatic] synonym: "formation of axonemal motor activity" EXACT [OBOL:automatic] synonym: "formation of axoneme" EXACT [OBOL:automatic] def: "The aggregation and bonding together of a set of macromolecules to form a axonemal motor activity" [OBOL:automatic] ! seconds spent parsing GO:0035082: 5.62 ! parse: GO:0035083 using "cilium axoneme biogenesis" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0005930, OBO_REL:unfolds_in=GO:0005929]) [-3] ! parse: GO:0035083 using "cilium axoneme biogenesis" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0035085]) [-2] ! parse: GO:0035083 using "cilium axoneme biogenesis" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=cdef(GO:0005930, [OBO_REL:part_of=GO:0005929])]) [-3] ! no existing xp def ! def: "The assembly and organization of a the bundle of microtubules and associated proteins that forms the core of cilia in eukaryotic cells and is responsible for their movements." ! PROPOSED: cellular component assembly that OBO_REL:results_in_creation_of cilium axoneme [cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0035085])] [Term] id: GO:0035083 ! cilium axoneme biogenesis intersection_of: GO:0022607 ! cellular component assembly intersection_of: OBO_REL:results_in_creation_of GO:0035085 ! cilium axoneme synonym: "assembly and maintenance of cilium axoneme" EXACT [OBOL:automatic] synonym: "assembly of cilium axoneme" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of cilium axoneme" EXACT [OBOL:automatic] synonym: "biogenesis of cilium axoneme" EXACT [OBOL:automatic] synonym: "cell structure assembly of cilium axoneme" EXACT [OBOL:automatic] synonym: "cellular component assembly of cilium axoneme" EXACT [OBOL:automatic] synonym: "cilium axoneme assembly" EXACT [OBOL:automatic] synonym: "cilium axoneme assembly and maintenance" EXACT [OBOL:automatic] synonym: "cilium axoneme biogenesis and assembly" EXACT [OBOL:automatic] synonym: "cilium axoneme cell structure assembly" EXACT [OBOL:automatic] synonym: "cilium axoneme cellular component assembly" EXACT [OBOL:automatic] synonym: "cilium axoneme complex assembly" EXACT [OBOL:automatic] synonym: "cilium axoneme formation" EXACT [OBOL:automatic] synonym: "complex assembly of cilium axoneme" EXACT [OBOL:automatic] synonym: "formation of cilium axoneme" EXACT [OBOL:automatic] def: "The aggregation and bonding together of a set of macromolecules to form a cilium axoneme" [OBOL:automatic] ! seconds spent parsing GO:0035083: 9.67 ! parse: GO:0035084 using "flagellum axoneme biogenesis" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0005930, OBO_REL:unfolds_in=FBbt:00004515]) [-3] ! parse: GO:0035084 using "flagellum axoneme biogenesis" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0005930, OBO_REL:unfolds_in=GO:0019861]) [-3] ! parse: GO:0035084 using "flagellum axoneme biogenesis" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=cdef(GO:0005930, [OBO_REL:part_of=GO:0019861])]) [-3] ! no existing xp def ! def: "The assembly and organization of a the bundle of microtubules and associated proteins that forms the core of flagellar in eukaryotic cells and is responsible for their movements." ! PROPOSED: cellular component assembly that OBO_REL:results_in_creation_of cdef(GO:0005930, [OBO_REL:part_of=GO:0019861]) [cdef(GO:0022607, [OBO_REL:results_in_creation_of=cdef(GO:0005930, [OBO_REL:part_of=GO:0019861])])] [Term] id: GO:0035084 ! flagellum axoneme biogenesis intersection_of: GO:0022607 ! cellular component assembly intersection_of: OBO_REL:results_in_creation_of flagellum_axonemal_motor_activity synonym: "assembly and maintenance of flagellum axonemal motor activity" EXACT [OBOL:automatic] synonym: "assembly and maintenance of flagellum axoneme" EXACT [OBOL:automatic] synonym: "assembly of flagellum axonemal motor activity" EXACT [OBOL:automatic] synonym: "assembly of flagellum axoneme" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of flagellum axonemal motor activity" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of flagellum axoneme" EXACT [OBOL:automatic] synonym: "biogenesis of flagellum axonemal motor activity" EXACT [OBOL:automatic] synonym: "biogenesis of flagellum axoneme" EXACT [OBOL:automatic] synonym: "cell structure assembly of flagellum axonemal motor activity" EXACT [OBOL:automatic] synonym: "cell structure assembly of flagellum axoneme" EXACT [OBOL:automatic] synonym: "cellular component assembly of flagellum axonemal motor activity" EXACT [OBOL:automatic] synonym: "cellular component assembly of flagellum axoneme" EXACT [OBOL:automatic] synonym: "complex assembly of flagellum axonemal motor activity" EXACT [OBOL:automatic] synonym: "complex assembly of flagellum axoneme" EXACT [OBOL:automatic] synonym: "flagellum axonemal motor activity assembly" EXACT [OBOL:automatic] synonym: "flagellum axonemal motor activity assembly and maintenance" EXACT [OBOL:automatic] synonym: "flagellum axonemal motor activity biogenesis" EXACT [OBOL:automatic] synonym: "flagellum axonemal motor activity biogenesis and assembly" EXACT [OBOL:automatic] synonym: "flagellum axonemal motor activity cell structure assembly" EXACT [OBOL:automatic] synonym: "flagellum axonemal motor activity cellular component assembly" EXACT [OBOL:automatic] synonym: "flagellum axonemal motor activity complex assembly" EXACT [OBOL:automatic] synonym: "flagellum axonemal motor activity formation" EXACT [OBOL:automatic] synonym: "flagellum axoneme assembly" EXACT [OBOL:automatic] synonym: "flagellum axoneme assembly and maintenance" EXACT [OBOL:automatic] synonym: "flagellum axoneme biogenesis and assembly" EXACT [OBOL:automatic] synonym: "flagellum axoneme cell structure assembly" EXACT [OBOL:automatic] synonym: "flagellum axoneme cellular component assembly" EXACT [OBOL:automatic] synonym: "flagellum axoneme complex assembly" EXACT [OBOL:automatic] synonym: "flagellum axoneme formation" EXACT [OBOL:automatic] synonym: "formation of flagellum axonemal motor activity" EXACT [OBOL:automatic] synonym: "formation of flagellum axoneme" EXACT [OBOL:automatic] def: "The aggregation and bonding together of a set of macromolecules to form a flagellum axonemal motor activity" [OBOL:automatic] ! seconds spent parsing GO:0035084: 13.95 ! No parse for: GO:0035092 sperm chromatin condensation ! No parse for: GO:0035093 spermatogenesis, exchange of chromosomal proteins ! parse: GO:0035096 using "larval midgut cell death" => cdef(GO:0008219, [OBO_REL:results_in_developmental_progression_of=FBbt:00005825]) [-2] ! parse: GO:0035096 using "larval midgut cell death" => cdef(GO:0016265, [OBO_REL:results_in_developmental_progression_of=CL:0000000, OBO_REL:unfolds_in=FBbt:00005825]) [-3] ! parse: GO:0035096 using "larval midgut cell death" => cdef(GO:0016265, [OBO_REL:results_in_developmental_progression_of=ZFA:0009000, OBO_REL:unfolds_in=FBbt:00005825]) [-3] ! parse: GO:0035096 using "larval midgut cell death" => cdef(GO:0016265, [OBO_REL:results_in_developmental_progression_of=cdef(ZFA:0009000, [OBO_REL:part_of=FBbt:00005825])]) [-3] ! parse: GO:0035096 using "larval midgut cell programmed cell death" => cdef(GO:0008219, [OBO_REL:results_in_developmental_progression_of=anon(programmed, anatomy), OBO_REL:unfolds_in=cdef(ZFA:0009000, [OBO_REL:part_of=FBbt:00005825])]) [-13] ! parse: GO:0035096 using "larval midgut cell programmed cell death" => cdef(GO:0008219, [and=results_in_developmental_progression_of(anon(programmed, anatomy))/unfolds_in(CL:0000000), OBO_REL:unfolds_in=FBbt:00005825]) [-3] ! parse: GO:0035096 using "larval midgut cell programmed cell death" => cdef(GO:0008219, [and=results_in_developmental_progression_of(anon(programmed, anatomy))/unfolds_in(ZFA:0009000), OBO_REL:unfolds_in=FBbt:00005825]) [-3] ! parse: GO:0035096 using "larval midgut cell programmed cell death" => cdef(GO:0012501, [OBO_REL:results_in_death_of=CL:0000000, OBO_REL:unfolds_in=FBbt:00005825]) [-3] ! parse: GO:0035096 using "larval midgut cell programmed cell death" => cdef(GO:0012501, [OBO_REL:results_in_developmental_progression_of=CL:0000000, OBO_REL:unfolds_in=FBbt:00005825]) [-3] ! parse: GO:0035096 using "larval midgut cell programmed cell death" => cdef(GO:0012501, [OBO_REL:results_in_developmental_progression_of=ZFA:0009000, OBO_REL:unfolds_in=FBbt:00005825]) [-3] ! parse: GO:0035096 using "larval midgut cell programmed cell death" => cdef(GO:0012501, [OBO_REL:results_in_developmental_progression_of=cdef(ZFA:0009000, [OBO_REL:part_of=FBbt:00005825])]) [-3] ! parse: GO:0035096 using "larval midgut cell programmed cell death" => cdef(GO:0016265, [OBO_REL:results_in_developmental_progression_of=anon(programmed cell, anatomy), OBO_REL:unfolds_in=cdef(ZFA:0009000, [OBO_REL:part_of=FBbt:00005825])]) [-18] ! parse: GO:0035096 using "larval midgut cell programmed cell death" => cdef(GO:0016265, [and=results_in_developmental_progression_of(anon(programmed cell, anatomy))/unfolds_in(CL:0000000), OBO_REL:unfolds_in=FBbt:00005825]) [-3] ! parse: GO:0035096 using "larval midgut cell programmed cell death" => cdef(GO:0016265, [and=results_in_developmental_progression_of(anon(programmed cell, anatomy))/unfolds_in(ZFA:0009000), OBO_REL:unfolds_in=FBbt:00005825]) [-3] ! no existing xp def ! def: "The stage-specific programmed cell death of cells of the larval midgut, during histolysis of the larval organ." ! PROPOSED: cell death that OBO_REL:results_in_developmental_progression_of larval midgut [cdef(GO:0008219, [OBO_REL:results_in_developmental_progression_of=FBbt:00005825])] [Term] id: GO:0035096 ! larval midgut cell programmed cell death intersection_of: GO:0008219 ! cell death intersection_of: OBO_REL:results_in_developmental_progression_of FBbt:00005825 ! larval midgut ! seconds spent parsing GO:0035096: 40.02 ! No parse for: GO:0035099 hemocyte migration ! parse: GO:0035108 using "limb morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000007]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping. For example a leg, arm or some types of fin." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of limb [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000007])] [Term] id: GO:0035108 ! limb morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of MA:0000007 ! limb synonym: "extremity anatomical structure morphogenesis" EXACT [OBOL:automatic] synonym: "extremity morphogenesis" EXACT [OBOL:automatic] ! seconds spent parsing GO:0035108: 0.02 ! parse: GO:0035109 using "imaginal disc-derived limb morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(- derived limb, anatomy), OBO_REL:unfolds_in=FBbt:00001761]) [-16] ! parse: GO:0035109 using "imaginal disc-derived limb morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=cdef(FBbt:00001761, [OBO_REL:derives_from=MA:0000007])]) [-3] ! parse: GO:0035109 using "imaginal disc-derived limb morphogenesis" => cdef(GO:0035108, [OBO_REL:results_in_developmental_progression_of=anon(- derived, anatomy), OBO_REL:unfolds_in=FBbt:00001761]) [-11] ! no existing xp def ! def: "The process by which the anatomical structures of limbs that are derived from an imaginal disc are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of cdef(FBbt:00001761, [OBO_REL:derives_from=MA:0000007]) [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=cdef(FBbt:00001761, [OBO_REL:derives_from=MA:0000007])])] [Term] id: GO:0035109 ! imaginal disc-derived limb morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of imaginal_disc_-_derived_extremity synonym: "imaginal disc-derived extremity anatomical structure morphogenesis" EXACT [OBOL:automatic] synonym: "imaginal disc-derived extremity morphogenesis" EXACT [OBOL:automatic] synonym: "imaginal disk-derived extremity anatomical structure morphogenesis" EXACT [OBOL:automatic] synonym: "imaginal disk-derived extremity morphogenesis" EXACT [OBOL:automatic] synonym: "imaginal disk-derived limb morphogenesis" EXACT [OBOL:automatic] ! seconds spent parsing GO:0035109: 19.95 ! parse: GO:0035112 using "genital morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(genital, anatomy)]) [-8] ! parse: GO:0035112 using "genitalia morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00004826]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of genitalia are generated and organized. Morphogenesis pertains to the creation of form. The genitalia are the organs of reproduction or generation, external and internal." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of genitalia [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00004826])] [Term] id: GO:0035112 ! genitalia morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of FBbt:00004826 ! genitalia ! seconds spent parsing GO:0035112: 0.03 ! parse: GO:0035113 using "embryonic appendage morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(embryonic appendage, anatomy)]) [-20] ! parse: GO:0035113 using "embryonic appendage morphogenesis" => cdef(GO:0035107, [OBO_REL:part_of=GO:0009790]) [-2] ! parse: GO:0035113 using "embryonic appendage morphogenesis" => cdef(GO:0035107, [OBO_REL:results_in_developmental_progression_of=anon(embryonic, anatomy)]) [-10] ! parse: GO:0035113 using "embryonic appendage morphogenesis" => cdef(cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(appendage, anatomy)]), [OBO_REL:part_of=GO:0009790]) [-11] ! no existing xp def ! def: "The process, occurring in the embryo, by which the anatomical structures of the appendage are generated and organized. Morphogenesis pertains to the creation of form. An appendage is an organ or part that is attached to the trunk of an organism. For example a limb or a branch." ! PROPOSED: appendage morphogenesis that OBO_REL:part_of embryonic development [cdef(GO:0035107, [OBO_REL:part_of=GO:0009790])] [Term] id: GO:0035113 ! embryonic appendage morphogenesis intersection_of: GO:0035107 ! appendage morphogenesis intersection_of: OBO_REL:part_of GO:0009790 ! embryonic development synonym: "embryogenesis, appendage morphogenesis" EXACT [OBOL:automatic] synonym: "embryonal development, appendage morphogenesis" EXACT [OBOL:automatic] synonym: "embryonic development, appendage morphogenesis" EXACT [OBOL:automatic] def: "A appendage morphogenesis that is part of a embryogenesis" [OBOL:automatic] ! seconds spent parsing GO:0035113: 8.67 ! parse: GO:0035114 using "imaginal disc-derived appendage morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(- derived appendage, anatomy), OBO_REL:unfolds_in=FBbt:00001761]) [-21] ! parse: GO:0035114 using "imaginal disc-derived appendage morphogenesis" => cdef(GO:0035107, [OBO_REL:results_in_developmental_progression_of=anon(- derived, anatomy), OBO_REL:unfolds_in=FBbt:00001761]) [-11] ! no existing xp def ! def: "The process by which the anatomical structures of appendages are generated and organized. Morphogenesis pertains to the creation of form. An appendage is an organ or part that is attached to the trunk of an organism." ! PROPOSED: appendage morphogenesis that OBO_REL:results_in_developmental_progression_of anon(- derived, anatomy) and OBO_REL:unfolds_in imaginal disc [cdef(GO:0035107, [OBO_REL:results_in_developmental_progression_of=anon(- derived, anatomy), OBO_REL:unfolds_in=FBbt:00001761])] [Term] id: GO:0035114 ! imaginal disc-derived appendage morphogenesis intersection_of: GO:0035107 ! appendage morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of anatomy:-_derived intersection_of: OBO_REL:unfolds_in FBbt:00001761 ! imaginal disc synonym: "imaginal disk-derived appendage morphogenesis" EXACT [OBOL:automatic] ! seconds spent parsing GO:0035114: 18.22 ! parse: GO:0035115 using "embryonic forelimb morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(embryonic forelimb, anatomy)]) [-19] ! parse: GO:0035115 using "embryonic forelimb morphogenesis" => cdef(GO:0035136, [OBO_REL:part_of=GO:0009790]) [-2] ! parse: GO:0035115 using "embryonic forelimb morphogenesis" => cdef(GO:0035136, [OBO_REL:results_in_developmental_progression_of=anon(embryonic, anatomy)]) [-10] ! parse: GO:0035115 using "embryonic forelimb morphogenesis" => cdef(cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000025]), [OBO_REL:part_of=GO:0009790]) [-3] ! no existing xp def ! def: "The process, occurring in the embryo, by which the anatomical structures of the forelimb are generated and organized. Morphogenesis pertains to the creation of form. The forelimbs are the front limbs of an animal." ! PROPOSED: forelimb morphogenesis that OBO_REL:part_of embryonic development [cdef(GO:0035136, [OBO_REL:part_of=GO:0009790])] [Term] id: GO:0035115 ! embryonic forelimb morphogenesis intersection_of: GO:0035136 ! forelimb morphogenesis intersection_of: OBO_REL:part_of GO:0009790 ! embryonic development synonym: "embryogenesis, forelimb morphogenesis" EXACT [OBOL:automatic] synonym: "embryonal development, forelimb morphogenesis" EXACT [OBOL:automatic] synonym: "embryonic development, forelimb morphogenesis" EXACT [OBOL:automatic] def: "A forelimb morphogenesis that is part of a embryogenesis" [OBOL:automatic] ! seconds spent parsing GO:0035115: 9.67 ! parse: GO:0035116 using "embryonic hindlimb morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(embryonic hindlimb, anatomy)]) [-19] ! parse: GO:0035116 using "embryonic hindlimb morphogenesis" => cdef(GO:0035137, [OBO_REL:part_of=GO:0009790]) [-2] ! parse: GO:0035116 using "embryonic hindlimb morphogenesis" => cdef(GO:0035137, [OBO_REL:results_in_developmental_progression_of=anon(embryonic, anatomy)]) [-10] ! parse: GO:0035116 using "embryonic hindlimb morphogenesis" => cdef(cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000026]), [OBO_REL:part_of=GO:0009790]) [-3] ! no existing xp def ! def: "The process, occurring in the embryo, by which the anatomical structures of the hindlimbs are generated and organized. Morphogenesis pertains to the creation of form. The hindlimbs are the posterior limbs of an animal." ! PROPOSED: hindlimb morphogenesis that OBO_REL:part_of embryonic development [cdef(GO:0035137, [OBO_REL:part_of=GO:0009790])] [Term] id: GO:0035116 ! embryonic hindlimb morphogenesis intersection_of: GO:0035137 ! hindlimb morphogenesis intersection_of: OBO_REL:part_of GO:0009790 ! embryonic development synonym: "embryogenesis, hindlimb morphogenesis" EXACT [OBOL:automatic] synonym: "embryonal development, hindlimb morphogenesis" EXACT [OBOL:automatic] synonym: "embryonic development, hindlimb morphogenesis" EXACT [OBOL:automatic] def: "A hindlimb morphogenesis that is part of a embryogenesis" [OBOL:automatic] ! seconds spent parsing GO:0035116: 9.66 ! parse: GO:0035117 using "embryonic arm morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(embryonic arm, anatomy)]) [-14] ! parse: GO:0035117 using "embryonic arm morphogenesis" => cdef(GO:0035140, [OBO_REL:part_of=GO:0009790]) [-2] ! parse: GO:0035117 using "embryonic arm morphogenesis" => cdef(GO:0035140, [OBO_REL:results_in_developmental_progression_of=anon(embryonic, anatomy)]) [-10] ! parse: GO:0035117 using "embryonic arm morphogenesis" => cdef(cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000033]), [OBO_REL:part_of=GO:0009790]) [-3] ! no existing xp def ! def: "The process, occurring in the embryo, by which the anatomical structures of the arm are generated and organized. Morphogenesis pertains to the creation of form. In humans, the arms are the two upper limbs of the body from the shoulder to the hand." ! PROPOSED: arm morphogenesis that OBO_REL:part_of embryonic development [cdef(GO:0035140, [OBO_REL:part_of=GO:0009790])] [Term] id: GO:0035117 ! embryonic arm morphogenesis intersection_of: GO:0035140 ! arm morphogenesis intersection_of: OBO_REL:part_of GO:0009790 ! embryonic development synonym: "embryogenesis, arm morphogenesis" EXACT [OBOL:automatic] synonym: "embryonal development, arm morphogenesis" EXACT [OBOL:automatic] synonym: "embryonic development, arm morphogenesis" EXACT [OBOL:automatic] def: "A arm morphogenesis that is part of a embryogenesis" [OBOL:automatic] ! seconds spent parsing GO:0035117: 9.7 ! parse: GO:0035118 using "embryonic pectoral fin morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(embryonic pectoral fin, anatomy)]) [-23] ! parse: GO:0035118 using "embryonic pectoral fin morphogenesis" => cdef(GO:0035138, [OBO_REL:part_of=GO:0009790]) [-2] ! parse: GO:0035118 using "embryonic pectoral fin morphogenesis" => cdef(GO:0035138, [OBO_REL:results_in_developmental_progression_of=anon(embryonic, anatomy)]) [-10] ! parse: GO:0035118 using "embryonic pectoral fin morphogenesis" => cdef(cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0001161]), [OBO_REL:part_of=GO:0009790]) [-3] ! no existing xp def ! def: "The process, occurring in the embryo, by which the anatomical structures of the pectoral fin are generated and organized. Morphogenesis pertains to the creation of form. Pectoral fins are bilaterally paired fins mounted lateraly and located behind the gill covers of fish. These fins are used for lateral mobility and propulsion." ! PROPOSED: pectoral fin morphogenesis that OBO_REL:part_of embryonic development [cdef(GO:0035138, [OBO_REL:part_of=GO:0009790])] [Term] id: GO:0035118 ! embryonic pectoral fin morphogenesis intersection_of: GO:0035138 ! pectoral fin morphogenesis intersection_of: OBO_REL:part_of GO:0009790 ! embryonic development synonym: "embryogenesis, pectoral fin morphogenesis" EXACT [OBOL:automatic] synonym: "embryonal development, pectoral fin morphogenesis" EXACT [OBOL:automatic] synonym: "embryonic development, pectoral fin morphogenesis" EXACT [OBOL:automatic] def: "A pectoral fin morphogenesis that is part of a embryogenesis" [OBOL:automatic] ! seconds spent parsing GO:0035118: 9.86 ! parse: GO:0035119 using "embryonic pelvic fin morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(embryonic pelvic fin, anatomy)]) [-21] ! parse: GO:0035119 using "embryonic pelvic fin morphogenesis" => cdef(GO:0035139, [OBO_REL:part_of=GO:0009790]) [-2] ! parse: GO:0035119 using "embryonic pelvic fin morphogenesis" => cdef(GO:0035139, [OBO_REL:results_in_developmental_progression_of=anon(embryonic, anatomy)]) [-10] ! parse: GO:0035119 using "embryonic pelvic fin morphogenesis" => cdef(cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0001184]), [OBO_REL:part_of=GO:0009790]) [-3] ! no existing xp def ! def: "The process, occurring in the embryo, by which the anatomical structures of the pelvic fin are generated and organized. Morphogenesis pertains to the creation of form. The pelvic fins are bilaterally paired fins mounted in a ventral-lateral position on most fish. These fins are used primarily for lateral mobility and propulsion." ! PROPOSED: pelvic fin morphogenesis that OBO_REL:part_of embryonic development [cdef(GO:0035139, [OBO_REL:part_of=GO:0009790])] [Term] id: GO:0035119 ! embryonic pelvic fin morphogenesis intersection_of: GO:0035139 ! pelvic fin morphogenesis intersection_of: OBO_REL:part_of GO:0009790 ! embryonic development synonym: "embryogenesis, pelvic fin morphogenesis" EXACT [OBOL:automatic] synonym: "embryonal development, pelvic fin morphogenesis" EXACT [OBOL:automatic] synonym: "embryonic development, pelvic fin morphogenesis" EXACT [OBOL:automatic] def: "A pelvic fin morphogenesis that is part of a embryogenesis" [OBOL:automatic] ! seconds spent parsing GO:0035119: 9.89 ! parse: GO:0035121 using "tail morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000008]) [-2] ! parse: GO:0035121 using "tail morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0001117]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of the tail are generated and organized. Morphogenesis pertains to the creation of form. The tail is the hindmost part of some animals." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of tail [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0001117])] [Term] id: GO:0035121 ! tail morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0001117 ! tail ! seconds spent parsing GO:0035121: 6.19 ! parse: GO:0035122 using "embryonic medial fin morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(embryonic medial fin, anatomy)]) [-21] ! parse: GO:0035122 using "embryonic medial fin morphogenesis" => cdef(GO:0035141, [OBO_REL:part_of=GO:0009790]) [-2] ! parse: GO:0035122 using "embryonic medial fin morphogenesis" => cdef(GO:0035141, [OBO_REL:results_in_developmental_progression_of=anon(embryonic, anatomy)]) [-10] ! parse: GO:0035122 using "embryonic medial fin morphogenesis" => cdef(cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(medial fin, anatomy)]), [OBO_REL:part_of=GO:0009790]) [-12] ! parse: GO:0035122 using "embryonic unpaired fin morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(embryonic unpaired fin, anatomy)]) [-23] ! parse: GO:0035122 using "embryonic unpaired fin morphogenesis" => cdef(GO:0035141, [OBO_REL:part_of=GO:0009790]) [-2] ! parse: GO:0035122 using "embryonic unpaired fin morphogenesis" => cdef(GO:0035141, [OBO_REL:results_in_developmental_progression_of=anon(embryonic, anatomy)]) [-10] ! parse: GO:0035122 using "embryonic unpaired fin morphogenesis" => cdef(cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(unpaired fin, anatomy)]), [OBO_REL:part_of=GO:0009790]) [-14] ! no existing xp def ! def: "The process, occurring in the embryo, by which the anatomical structures of the medial fin are generated and organized. Morphogenesis pertains to the creation of form. Medial fins are unpaired fins of fish, usually located dorsomedially or ventromedially and primarily used for stability while swimming." ! PROPOSED: medial fin morphogenesis that OBO_REL:part_of embryonic development [cdef(GO:0035141, [OBO_REL:part_of=GO:0009790])] [Term] id: GO:0035122 ! embryonic medial fin morphogenesis intersection_of: GO:0035141 ! medial fin morphogenesis intersection_of: OBO_REL:part_of GO:0009790 ! embryonic development synonym: "embryogenesis, medial fin morphogenesis" EXACT [OBOL:automatic] synonym: "embryogenesis, unpaired fin morphogenesis" EXACT [OBOL:automatic] synonym: "embryonal development, medial fin morphogenesis" EXACT [OBOL:automatic] synonym: "embryonal development, unpaired fin morphogenesis" EXACT [OBOL:automatic] synonym: "embryonic development, medial fin morphogenesis" EXACT [OBOL:automatic] synonym: "embryonic development, unpaired fin morphogenesis" EXACT [OBOL:automatic] def: "A medial fin morphogenesis that is part of a embryogenesis" [OBOL:automatic] ! seconds spent parsing GO:0035122: 18.19 ! parse: GO:0035123 using "embryonic dorsal fin morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(embryonic dorsal fin, anatomy)]) [-21] ! parse: GO:0035123 using "embryonic dorsal fin morphogenesis" => cdef(GO:0035142, [OBO_REL:part_of=GO:0009790]) [-2] ! parse: GO:0035123 using "embryonic dorsal fin morphogenesis" => cdef(GO:0035142, [OBO_REL:results_in_developmental_progression_of=anon(embryonic, anatomy)]) [-10] ! parse: GO:0035123 using "embryonic dorsal fin morphogenesis" => cdef(cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0001173]), [OBO_REL:part_of=GO:0009790]) [-3] ! no existing xp def ! def: "The process, occurring in the embryo, by which the anatomical structures of the dorsal fin are generated and organized. Morphogenesis pertains to the creation of form. A dorsal fin is an unpaired medial fin on the dorsal aspect of a fish that provides lateral stability while swimming. Generally fish have one or two dorsal fins." ! PROPOSED: dorsal fin morphogenesis that OBO_REL:part_of embryonic development [cdef(GO:0035142, [OBO_REL:part_of=GO:0009790])] [Term] id: GO:0035123 ! embryonic dorsal fin morphogenesis intersection_of: GO:0035142 ! dorsal fin morphogenesis intersection_of: OBO_REL:part_of GO:0009790 ! embryonic development synonym: "embryogenesis, dorsal fin morphogenesis" EXACT [OBOL:automatic] synonym: "embryonal development, dorsal fin morphogenesis" EXACT [OBOL:automatic] synonym: "embryonic development, dorsal fin morphogenesis" EXACT [OBOL:automatic] def: "A dorsal fin morphogenesis that is part of a embryogenesis" [OBOL:automatic] ! seconds spent parsing GO:0035123: 10.23 ! parse: GO:0035124 using "embryonic caudal fin morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(embryonic caudal fin, anatomy)]) [-21] ! parse: GO:0035124 using "embryonic caudal fin morphogenesis" => cdef(GO:0035143, [OBO_REL:part_of=GO:0009790]) [-2] ! parse: GO:0035124 using "embryonic caudal fin morphogenesis" => cdef(GO:0035143, [OBO_REL:results_in_developmental_progression_of=anon(embryonic, anatomy)]) [-10] ! parse: GO:0035124 using "embryonic caudal fin morphogenesis" => cdef(cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0001058]), [OBO_REL:part_of=GO:0009790]) [-3] ! no existing xp def ! def: "The process, occurring in the embryo, by which the anatomical structures of the caudal fin are generated and organized. Morphogenesis pertains to the creation of form. The caudal fin is an unpaired medial fin mounted at the caudal end of the fish and is the main fin used for propulsion." ! PROPOSED: caudal fin morphogenesis that OBO_REL:part_of embryonic development [cdef(GO:0035143, [OBO_REL:part_of=GO:0009790])] [Term] id: GO:0035124 ! embryonic caudal fin morphogenesis intersection_of: GO:0035143 ! caudal fin morphogenesis intersection_of: OBO_REL:part_of GO:0009790 ! embryonic development synonym: "embryogenesis, caudal fin morphogenesis" EXACT [OBOL:automatic] synonym: "embryonal development, caudal fin morphogenesis" EXACT [OBOL:automatic] synonym: "embryonic development, caudal fin morphogenesis" EXACT [OBOL:automatic] def: "A caudal fin morphogenesis that is part of a embryogenesis" [OBOL:automatic] ! seconds spent parsing GO:0035124: 9.85 ! parse: GO:0035125 using "embryonic anal fin morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(embryonic anal fin, anatomy)]) [-19] ! parse: GO:0035125 using "embryonic anal fin morphogenesis" => cdef(GO:0035144, [OBO_REL:part_of=GO:0009790]) [-2] ! parse: GO:0035125 using "embryonic anal fin morphogenesis" => cdef(GO:0035144, [OBO_REL:results_in_developmental_progression_of=anon(embryonic, anatomy)]) [-10] ! parse: GO:0035125 using "embryonic anal fin morphogenesis" => cdef(cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0001162]), [OBO_REL:part_of=GO:0009790]) [-3] ! no existing xp def ! def: "The process, occurring in the embryo, by which the anatomical structures of the embryonic anal fin are generated and organized. Morphogenesis pertains to the creation of form. An anal fin is an unpaired medial fin on the ventral aspect near the caudal end of a fish, which provides lateral stability while swimming." ! PROPOSED: anal fin morphogenesis that OBO_REL:part_of embryonic development [cdef(GO:0035144, [OBO_REL:part_of=GO:0009790])] [Term] id: GO:0035125 ! embryonic anal fin morphogenesis intersection_of: GO:0035144 ! anal fin morphogenesis intersection_of: OBO_REL:part_of GO:0009790 ! embryonic development synonym: "embryogenesis, anal fin morphogenesis" EXACT [OBOL:automatic] synonym: "embryonal development, anal fin morphogenesis" EXACT [OBOL:automatic] synonym: "embryonic development, anal fin morphogenesis" EXACT [OBOL:automatic] def: "A anal fin morphogenesis that is part of a embryogenesis" [OBOL:automatic] ! seconds spent parsing GO:0035125: 9.84 ! parse: GO:0035136 using "forelimb morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000025]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of the forelimb are generated and organized. Morphogenesis pertains to the creation of form." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of forelimb [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000025])] [Term] id: GO:0035136 ! forelimb morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of MA:0000025 ! forelimb ! seconds spent parsing GO:0035136: 0.01 ! parse: GO:0035137 using "hindlimb morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000026]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of the hindlimb are generated and organized. Morphogenesis pertains to the creation of form." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of hindlimb [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000026])] [Term] id: GO:0035137 ! hindlimb morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of MA:0000026 ! hindlimb ! seconds spent parsing GO:0035137: 0.01 ! parse: GO:0035138 using "pectoral fin morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0001161]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of the pectoral fin are generated and organized. Morphogenesis pertains to the creation of form. Pectoral fins are bilaterally paired fins mounted lateraly and located behind the gill covers of fish. These fins are used for lateral mobility and propulsion." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of pectoral fin [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0001161])] [Term] id: GO:0035138 ! pectoral fin morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0001161 ! pectoral fin ! seconds spent parsing GO:0035138: 0.02 ! parse: GO:0035139 using "pelvic fin morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0001184]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of the pelvic fin are generated and organized. Morphogenesis pertains to the creation of form. Pelvic fins are bilaterally paired fins mounted in a ventral-lateral position on most fish. These fins are used primarily for lateral mobility and propulsion." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of pelvic fin [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0001184])] [Term] id: GO:0035139 ! pelvic fin morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0001184 ! pelvic fin ! seconds spent parsing GO:0035139: 0.02 ! parse: GO:0035142 using "dorsal fin morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0001173]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of the dorsal fin are generated and organized. Morphogenesis pertains to the creation of form. A dorsal fin is an unpaired medial fin on the dorsal aspect of fish that provides lateral stability while swimming. Generally fish have one or two dorsal fins." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of dorsal fin [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0001173])] [Term] id: GO:0035142 ! dorsal fin morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0001173 ! dorsal fin ! seconds spent parsing GO:0035142: 0.01 ! parse: GO:0035143 using "caudal fin morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0001058]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of the caudal fin are generated and organized. Morphogenesis pertains to the creation of form. A caudal fin is an unpaired medial fin mounted at the caudal end of the fish, and is the main fin used for propulsion." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of caudal fin [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0001058])] [Term] id: GO:0035143 ! caudal fin morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0001058 ! caudal fin synonym: "tail fin anatomical structure morphogenesis" EXACT [OBOL:automatic] synonym: "tail fin morphogenesis" EXACT [OBOL:automatic] ! seconds spent parsing GO:0035143: 0.01 ! parse: GO:0035144 using "anal fin morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0001162]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of the anal fin are generated and organized. Morphogenesis pertains to the creation of form. An anal fin is an unpaired medial fin on the ventral aspect near the caudal end of a fish, which provides lateral stability while swimming." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of anal fin [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0001162])] [Term] id: GO:0035144 ! anal fin morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0001162 ! anal fin ! seconds spent parsing GO:0035144: 0.02 ! No parse for: GO:0035147 branch fusion, open tracheal system ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0035149 using "tracheal lumen formation" => cdef(GO:0035148, [OBO_REL:results_in_developmental_progression_of=anon(tracheal, anatomy)]) [-9] ! parse: GO:0035149 using "tracheal lumen formation" => cdef(GO:0035148, [OBO_REL:results_in_formation_of=anon(tracheal, anatomy)]) [-9] ! parse: GO:0035149 using "tracheal lumen formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(tracheal lumen, anatomy)]) [-15] ! no existing xp def ! def: "Creation of the central hole of a tube in an open tracheal system through which gases flow." ! PROPOSED: lumen formation that OBO_REL:results_in_formation_of anon(tracheal, anatomy) [cdef(GO:0035148, [OBO_REL:results_in_formation_of=anon(tracheal, anatomy)])] [Term] id: GO:0035149 ! lumen formation, open tracheal system intersection_of: GO:0035148 ! lumen formation intersection_of: OBO_REL:results_in_formation_of anatomy:tracheal synonym: "tracheal lumen formation in an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0035149: 9.13 ! No parse for: GO:0035153 epithelial cell type specification, open tracheal system ! parse: GO:0035154 using "terminal cell fate specification" => cdef(GO:0001708, [OBO_REL:results_in_specification_of=CL:0000000, OBO_REL:unfolds_in=FBbt:00005112]) [-3] ! no existing xp def ! def: "Process by which a cell in an open tracheal system becomes capable of differentiating autonomously into a terminal cell in an environment that is neutral with respect to the developmental pathway; upon specification, the cell fate can be reversed. Terminal cells send long and bifurcated hollow branches toward target tissues to allow oxygen exchange." ! PROPOSED: cell fate specification that OBO_REL:results_in_specification_of cell and OBO_REL:unfolds_in nerve terminal [cdef(GO:0001708, [OBO_REL:results_in_specification_of=CL:0000000, OBO_REL:unfolds_in=FBbt:00005112])] [Term] id: GO:0035154 ! terminal cell fate specification, open tracheal system intersection_of: GO:0001708 ! cell fate specification intersection_of: OBO_REL:results_in_specification_of CL:0000000 ! cell intersection_of: OBO_REL:unfolds_in FBbt:00005112 ! nerve terminal synonym: "nerve terminal cell cell fate specification" EXACT [OBOL:automatic] synonym: "nerve terminal cell fate specification" EXACT [OBOL:automatic] synonym: "nerve terminal cell specification" EXACT [OBOL:automatic] ! seconds spent parsing GO:0035154: 27.07 ! No parse for: GO:0035158 regulation of tube diameter, open tracheal system ! No parse for: GO:0035159 regulation of tube length, open tracheal system ! No parse for: GO:0035161 imaginal disc lineage restriction ! parse: GO:0035162 using "embryonic haemopoiesis" => cdef(GO:0030097, [OBO_REL:part_of=GO:0009790]) [-2] ! parse: GO:0035162 using "embryonic haemopoiesis" => cdef(GO:0030097, [OBO_REL:results_in_developmental_progression_of=anon(embryonic, anatomy)]) [-10] ! parse: GO:0035162 using "embryonic hemopoiesis" => cdef(GO:0030097, [OBO_REL:part_of=GO:0009790]) [-2] ! parse: GO:0035162 using "embryonic hemopoiesis" => cdef(GO:0030097, [OBO_REL:results_in_developmental_progression_of=anon(embryonic, anatomy)]) [-10] ! no existing xp def ! def: "The stages of blood cell formation that take place within the embryo." ! PROPOSED: hemopoiesis that OBO_REL:part_of embryonic development [cdef(GO:0030097, [OBO_REL:part_of=GO:0009790])] [Term] id: GO:0035162 ! embryonic hemopoiesis intersection_of: GO:0030097 ! hemopoiesis intersection_of: OBO_REL:part_of GO:0009790 ! embryonic development synonym: "blood cell biosynthesis during embryogenesis" EXACT [OBOL:automatic] synonym: "blood cell biosynthesis during embryonal development" EXACT [OBOL:automatic] synonym: "blood cell biosynthesis during embryonic development" EXACT [OBOL:automatic] synonym: "blood cell biosynthesis involved in embryogenesis" EXACT [OBOL:automatic] synonym: "blood cell biosynthesis involved in embryonal development" EXACT [OBOL:automatic] synonym: "blood cell biosynthesis involved in embryonic development" EXACT [OBOL:automatic] synonym: "blood cell biosynthesis of embryogenesis" EXACT [OBOL:automatic] synonym: "blood cell biosynthesis of embryonal development" EXACT [OBOL:automatic] synonym: "blood cell biosynthesis of embryonic development" EXACT [OBOL:automatic] synonym: "blood cell biosynthesis with embryogenesis" EXACT [OBOL:automatic] synonym: "blood cell biosynthesis with embryonal development" EXACT [OBOL:automatic] synonym: "blood cell biosynthesis with embryonic development" EXACT [OBOL:automatic] synonym: "blood cell formation during embryogenesis" EXACT [OBOL:automatic] synonym: "blood cell formation during embryonal development" EXACT [OBOL:automatic] synonym: "blood cell formation during embryonic development" EXACT [OBOL:automatic] synonym: "blood cell formation involved in embryogenesis" EXACT [OBOL:automatic] synonym: "blood cell formation involved in embryonal development" EXACT [OBOL:automatic] synonym: "blood cell formation involved in embryonic development" EXACT [OBOL:automatic] synonym: "blood cell formation of embryogenesis" EXACT [OBOL:automatic] synonym: "blood cell formation of embryonal development" EXACT [OBOL:automatic] synonym: "blood cell formation of embryonic development" EXACT [OBOL:automatic] synonym: "blood cell formation with embryogenesis" EXACT [OBOL:automatic] synonym: "blood cell formation with embryonal development" EXACT [OBOL:automatic] synonym: "blood cell formation with embryonic development" EXACT [OBOL:automatic] synonym: "embryogenesis, blood cell biosynthesis" EXACT [OBOL:automatic] synonym: "embryogenesis, blood cell formation" EXACT [OBOL:automatic] synonym: "embryogenesis, haemopoiesis" EXACT [OBOL:automatic] synonym: "embryogenesis, hematopoiesis" EXACT [OBOL:automatic] synonym: "embryogenesis, hemopoiesis" EXACT [OBOL:automatic] synonym: "embryonal development, blood cell biosynthesis" EXACT [OBOL:automatic] synonym: "embryonal development, blood cell formation" EXACT [OBOL:automatic] synonym: "embryonal development, haemopoiesis" EXACT [OBOL:automatic] synonym: "embryonal development, hematopoiesis" EXACT [OBOL:automatic] synonym: "embryonal development, hemopoiesis" EXACT [OBOL:automatic] synonym: "embryonic blood cell biosynthesis" EXACT [OBOL:automatic] synonym: "embryonic blood cell formation" EXACT [OBOL:automatic] synonym: "embryonic development, blood cell biosynthesis" EXACT [OBOL:automatic] synonym: "embryonic development, blood cell formation" EXACT [OBOL:automatic] synonym: "embryonic development, haemopoiesis" EXACT [OBOL:automatic] synonym: "embryonic development, hematopoiesis" EXACT [OBOL:automatic] synonym: "embryonic development, hemopoiesis" EXACT [OBOL:automatic] synonym: "embryonic hematopoiesis" EXACT [OBOL:automatic] synonym: "hematopoiesis during embryogenesis" EXACT [OBOL:automatic] synonym: "hematopoiesis during embryonal development" EXACT [OBOL:automatic] synonym: "hematopoiesis during embryonic development" EXACT [OBOL:automatic] synonym: "hematopoiesis involved in embryogenesis" EXACT [OBOL:automatic] synonym: "hematopoiesis involved in embryonal development" EXACT [OBOL:automatic] synonym: "hematopoiesis involved in embryonic development" EXACT [OBOL:automatic] synonym: "hematopoiesis of embryogenesis" EXACT [OBOL:automatic] synonym: "hematopoiesis of embryonal development" EXACT [OBOL:automatic] synonym: "hematopoiesis of embryonic development" EXACT [OBOL:automatic] synonym: "hematopoiesis with embryogenesis" EXACT [OBOL:automatic] synonym: "hematopoiesis with embryonal development" EXACT [OBOL:automatic] synonym: "hematopoiesis with embryonic development" EXACT [OBOL:automatic] def: "A blood cell biosynthesis that is part of a embryogenesis" [OBOL:automatic] ! seconds spent parsing GO:0035162: 17.4 ! parse: GO:0035163 using "embryonic hemocyte differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(embryonic hemocyte, cell)]) [-19] ! parse: GO:0035163 using "embryonic hemocyte differentiation" => cdef(GO:0042386, [OBO_REL:part_of=GO:0009790]) [-2] ! parse: GO:0035163 using "embryonic hemocyte differentiation" => cdef(GO:0042386, [OBO_REL:results_in_acquisition_of_features_of=anon(embryonic, cell)]) [-10] ! parse: GO:0035163 using "embryonic hemocyte differentiation" => cdef(cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(hemocyte, cell)]), [OBO_REL:part_of=GO:0009790]) [-10] ! parse: GO:0035163 using "embryonic hemocyte differentiation (sensu Arthropoda)" => cdef(GO:0042386, [OBO_REL:part_of=GO:0009790]) [-2] ! parse: GO:0035163 using "embryonic hemocyte differentiation (sensu Arthropoda)" => cdef(GO:0042386, [OBO_REL:results_in_acquisition_of_features_of=anon(embryonic, cell)]) [-10] ! no existing xp def ! def: "The process whereby a relatively unspecialized cell derived from the embryonic head mesoderm acquires the specialized features of a mature hemocyte. Hemocytes are blood cells associated with a hemocoel (the cavity containing most of the major organs of the arthropod body) which are involved in defense and clotting of hemolymph, but not involved in transport of oxygen." ! PROPOSED: hemocyte differentiation that OBO_REL:part_of embryonic development [cdef(GO:0042386, [OBO_REL:part_of=GO:0009790])] [Term] id: GO:0035163 ! embryonic hemocyte differentiation intersection_of: GO:0042386 ! hemocyte differentiation intersection_of: OBO_REL:part_of GO:0009790 ! embryonic development synonym: "embryogenesis, hemocyte differentiation" EXACT [OBOL:automatic] synonym: "embryogenesis, hemocyte differentiation (sensu Arthropoda)" EXACT [OBOL:automatic] synonym: "embryonal development, hemocyte differentiation" EXACT [OBOL:automatic] synonym: "embryonal development, hemocyte differentiation (sensu Arthropoda)" EXACT [OBOL:automatic] synonym: "embryonic development, hemocyte differentiation" EXACT [OBOL:automatic] synonym: "embryonic development, hemocyte differentiation (sensu Arthropoda)" EXACT [OBOL:automatic] def: "A hemocyte differentiation (sensu Arthropoda) that is part of a embryogenesis" [OBOL:automatic] ! seconds spent parsing GO:0035163: 46.41 ! parse: GO:0035164 using "embryonic plasmatocyte cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(embryonic plasmatocyte, cell)]) [-23] ! parse: GO:0035164 using "embryonic plasmatocyte cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(embryonic plasmatocyte cell, cell)]) [-28] ! parse: GO:0035164 using "embryonic plasmatocyte cell differentiation" => cdef(GO:0042387, [OBO_REL:part_of=GO:0009790]) [-2] ! parse: GO:0035164 using "embryonic plasmatocyte cell differentiation" => cdef(GO:0042387, [OBO_REL:results_in_acquisition_of_features_of=anon(embryonic, cell)]) [-10] ! parse: GO:0035164 using "embryonic plasmatocyte cell differentiation" => cdef(GO:0042387, [OBO_REL:results_in_developmental_progression_of=anon(embryonic, anatomy)]) [-10] ! parse: GO:0035164 using "embryonic plasmatocyte cell differentiation" => cdef(cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000000, OBO_REL:unfolds_in=CL:0000394]), [OBO_REL:part_of=GO:0009790]) [-4] ! parse: GO:0035164 using "embryonic plasmatocyte cell differentiation" => cdef(cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000000, OBO_REL:unfolds_in=FBbt:00001685]), [OBO_REL:part_of=GO:0009790]) [-4] ! parse: GO:0035164 using "embryonic plasmatocyte cell differentiation" => cdef(cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000394]), [OBO_REL:part_of=GO:0009790]) [-3] ! parse: GO:0035164 using "embryonic plasmatocyte differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(embryonic plasmatocyte, cell)]) [-23] ! parse: GO:0035164 using "embryonic plasmatocyte differentiation" => cdef(GO:0042387, [OBO_REL:part_of=GO:0009790]) [-2] ! parse: GO:0035164 using "embryonic plasmatocyte differentiation" => cdef(GO:0042387, [OBO_REL:results_in_acquisition_of_features_of=anon(embryonic, cell)]) [-10] ! parse: GO:0035164 using "embryonic plasmatocyte differentiation" => cdef(GO:0042387, [OBO_REL:results_in_developmental_progression_of=anon(embryonic, anatomy)]) [-10] ! parse: GO:0035164 using "embryonic plasmatocyte differentiation" => cdef(cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000394]), [OBO_REL:part_of=GO:0009790]) [-3] ! no existing xp def ! def: "The process whereby an embryonic mesoderm-derived hemocyte precursor cell acquires the specialized features of the phagocytic blood-cell type, the plasmatocyte." ! PROPOSED: plasmatocyte differentiation that OBO_REL:part_of embryonic development [cdef(GO:0042387, [OBO_REL:part_of=GO:0009790])] [Term] id: GO:0035164 ! embryonic plasmatocyte differentiation intersection_of: GO:0042387 ! plasmatocyte differentiation intersection_of: OBO_REL:part_of GO:0009790 ! embryonic development synonym: "embryogenesis, plasmatocyte cell differentiation" EXACT [OBOL:automatic] synonym: "embryogenesis, plasmatocyte differentiation" EXACT [OBOL:automatic] synonym: "embryonal development, plasmatocyte cell differentiation" EXACT [OBOL:automatic] synonym: "embryonal development, plasmatocyte differentiation" EXACT [OBOL:automatic] synonym: "embryonic development, plasmatocyte cell differentiation" EXACT [OBOL:automatic] synonym: "embryonic development, plasmatocyte differentiation" EXACT [OBOL:automatic] def: "A plasmatocyte cell differentiation that is part of a embryogenesis" [OBOL:automatic] ! seconds spent parsing GO:0035164: 29.58 ! Already have xp for: GO:0035165 embryonic crystal cell differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of embryonic crystal cell [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000715])] ! parse: GO:0035167 using "lymph gland hemopoiesis" => cdef(GO:0030097, [OBO_REL:results_in_developmental_progression_of=FBbt:00001668]) [-2] ! parse: GO:0035167 using "lymph gland hemopoiesis" => cdef(GO:0030097, [OBO_REL:results_in_developmental_progression_of=anon(gland, anatomy), OBO_REL:unfolds_in=MA:0002520]) [-7] ! no existing xp def ! def: "The production of blood cells from the larval lymph gland. The lymph gland consists of three to six bilaterally paired lobes that are attached to the cardioblasts during larval stages, and it degenerates during pupal stages." ! PROPOSED: hemopoiesis that OBO_REL:results_in_developmental_progression_of lymph gland [cdef(GO:0030097, [OBO_REL:results_in_developmental_progression_of=FBbt:00001668])] [Term] id: GO:0035167 ! lymph gland hemopoiesis intersection_of: GO:0030097 ! hemopoiesis intersection_of: OBO_REL:results_in_developmental_progression_of FBbt:00001668 ! lymph gland synonym: "hematopoietic organ blood cell biosynthesis" EXACT [OBOL:automatic] synonym: "hematopoietic organ blood cell formation" EXACT [OBOL:automatic] synonym: "hematopoietic organ haemopoiesis" EXACT [OBOL:automatic] synonym: "hematopoietic organ hematopoiesis" EXACT [OBOL:automatic] synonym: "hematopoietic organ hemopoiesis" EXACT [OBOL:automatic] ! seconds spent parsing GO:0035167: 40.42 ! Already have xp for: GO:0035168 lymph gland hemocyte differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of lymph gland hemocyte [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000735])] ! Already have xp for: GO:0035169 lymph gland plasmatocyte differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of lymph gland plasmatocyte [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000733])] ! Already have xp for: GO:0035170 lymph gland crystal cell differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of lymph gland crystal cell [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000716])] ! Already have xp for: GO:0035171 lamellocyte differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of lamellocyte [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000396])] ! No parse for: GO:0035172 hemocyte proliferation ! No parse for: GO:0035177 larval foraging behavior ! No parse for: GO:0035179 larval turning behavior ! No parse for: GO:0035180 larval wandering behavior ! No parse for: GO:0035181 larval burrowing behavior ! No parse for: GO:0035191 nuclear axial expansion ! parse: GO:0035193 using "CNS metamorphosis" => cdef(GO:0007552, [OBO_REL:results_in_developmental_progression_of=FBbt:00005094]) [-2] ! parse: GO:0035193 using "central nervous system metamorphosis" => cdef(GO:0007552, [OBO_REL:results_in_developmental_progression_of=FBbt:00005094]) [-2] ! parse: GO:0035193 using "central nervous system metamorphosis" => cdef(GO:0007552, [OBO_REL:results_in_developmental_progression_of=MA:0000167]) [-2] ! parse: GO:0035193 using "central nervous system metamorphosis" => cdef(GO:0007552, [OBO_REL:results_in_developmental_progression_of=ZFA:0000012]) [-2] ! no existing xp def ! def: "Reorganization of the pre-existing, functional larval central nervous system into one that can serve the novel behavioral needs of the adult." ! PROPOSED: metamorphosis that OBO_REL:results_in_developmental_progression_of central nervous system [cdef(GO:0007552, [OBO_REL:results_in_developmental_progression_of=ZFA:0000012])] [Term] id: GO:0035193 ! larval central nervous system remodeling intersection_of: GO:0007552 ! metamorphosis intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0000012 ! central nervous system synonym: "cns metamorphosis" EXACT [OBOL:automatic] ! seconds spent parsing GO:0035193: 28.59 ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0035200 using "leg disc anterior/posterior pattern formation" => cdef(GO:0007389, [OBO_REL:results_in_developmental_progression_of=anon(anterior/posterior, anatomy), OBO_REL:unfolds_in=FBbt:00001780]) [-20] ! parse: GO:0035200 using "leg disc anterior/posterior pattern formation" => cdef(GO:0007389, [OBO_REL:results_in_developmental_progression_of=anon(disc anterior/posterior, anatomy), OBO_REL:unfolds_in=FBbt:00004640]) [-25] ! parse: GO:0035200 using "leg disc anterior/posterior pattern formation" => cdef(GO:0007389, [OBO_REL:results_in_developmental_progression_of=anon(disc anterior/posterior, anatomy), OBO_REL:unfolds_in=MA:0000047]) [-25] ! parse: GO:0035200 using "leg disc anterior/posterior pattern formation" => cdef(GO:0009952, [OBO_REL:results_in_developmental_progression_of=FBbt:00001780]) [-2] ! parse: GO:0035200 using "leg disc anterior/posterior pattern formation" => cdef(GO:0009952, [OBO_REL:results_in_developmental_progression_of=anon(disc, anatomy), OBO_REL:unfolds_in=FBbt:00004640]) [-6] ! parse: GO:0035200 using "leg disc anterior/posterior pattern formation" => cdef(GO:0009952, [OBO_REL:results_in_developmental_progression_of=anon(disc, anatomy), OBO_REL:unfolds_in=MA:0000047]) [-6] ! parse: GO:0035200 using "leg disc anterior/posterior pattern formation" => cdef(GO:0009952, [OBO_REL:results_in_patterning_for=FBbt:00001780]) [-2] ! parse: GO:0035200 using "leg disc anterior/posterior pattern formation" => cdef(GO:0009952, [OBO_REL:unfolds_in=FBbt:00001780]) [-2] ! parse: GO:0035200 using "leg disc anterior/posterior pattern formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(anterior/posterior pattern, anatomy), OBO_REL:unfolds_in=FBbt:00001780]) [-28] ! parse: GO:0035200 using "leg disc anterior/posterior pattern formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(disc anterior/posterior pattern, anatomy), OBO_REL:unfolds_in=FBbt:00004640]) [-33] ! parse: GO:0035200 using "leg disc anterior/posterior pattern formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(disc anterior/posterior pattern, anatomy), OBO_REL:unfolds_in=MA:0000047]) [-33] ! no existing xp def ! def: "The establishment, maintenance and elaboration of the anterior/posterior axis of the leg imaginal disc." ! PROPOSED: anterior/posterior pattern formation that OBO_REL:unfolds_in ventral thoracic disc [cdef(GO:0009952, [OBO_REL:unfolds_in=FBbt:00001780])] [Term] id: GO:0035200 ! leg disc anterior/posterior pattern formation intersection_of: GO:0009952 ! anterior/posterior pattern formation intersection_of: OBO_REL:unfolds_in FBbt:00001780 ! ventral thoracic disc synonym: "ventral thoracic disc anterior/posterior pattern formation" EXACT [OBOL:automatic] ! seconds spent parsing GO:0035200: 11.69 ! No parse for: GO:0035201 leg disc anterior/posterior lineage restriction ! No parse for: GO:0035202 sac formation, open tracheal system ! No relation defined: results_in_complete_developmental_of ! parse: GO:0035209 using "pupal development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(pupal, anatomy)]) [-6] ! no existing xp def ! def: "The process whose specific outcome is the progression of the pupa over time, from its formation to the mature structure. The pupa is a dormant life stage interposed between the larval and the adult stages in insects which undergo a complete metamorphosis." ! PROPOSED: developmental process that results_in_complete_developmental_of anon(pupal, anatomy) [cdef(GO:0032502, [results_in_complete_developmental_of=anon(pupal, anatomy)])] [Term] id: GO:0035209 ! pupal development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of anatomy:pupal ! seconds spent parsing GO:0035209: 8.7 ! Already have xp for: GO:0035211 spermathecum morphogenesis ! CURRENT : anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of spermathecum [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=cell:spermathecum])] ! No parse for: GO:0035212 cell competition in a multicellular organism ! No relation defined: results_in_complete_developmental_of ! parse: GO:0035213 using "clypeo-labral disc development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00001765]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the clypeo-labral disc over time, from its formation to the metamorphosis to form adult structures. The clypeo-labral disc develops into the labrum, anterior cibarial plate, fish trap bristles, epistomal sclerite." ! PROPOSED: developmental process that results_in_complete_developmental_of clypeo-labral disc [cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00001765])] [Term] id: GO:0035213 ! clypeo-labral disc development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of FBbt:00001765 ! clypeo-labral disc ! seconds spent parsing GO:0035213: 9.27 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0035214 using "eye-antennal disc development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00001766]) [-2] ! parse: GO:0035214 using "eye-antennal disc development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(- antennal disc, anatomy), OBO_REL:unfolds_in=FBbt:00004508]) [-17] ! parse: GO:0035214 using "eye-antennal disc development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(- antennal disc, anatomy), OBO_REL:unfolds_in=MA:0000261]) [-17] ! parse: GO:0035214 using "eye-antennal disc development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(- antennal disc, anatomy), OBO_REL:unfolds_in=ZFA:0000107]) [-17] ! no existing xp def ! def: "Progression of the eye-antennal imaginal disc over time, from its initial formation through to its metamorphosis to form adult structures including the eye, antenna, head capsule and maxillary palps." ! PROPOSED: developmental process that results_in_complete_developmental_of eye-antennal disc [cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00001766])] [Term] id: GO:0035214 ! eye-antennal disc development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of FBbt:00001766 ! eye-antennal disc ! seconds spent parsing GO:0035214: 11.46 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0035215 using "genital disc development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00001784]) [-2] ! no existing xp def ! def: "Progression of the genital imaginal disc over time, from its initial formation through to its metamorphosis to form the adult terminalia, comprising the entire set of internal and external genitalia and analia. Both sexes of Drosophila have a single genital disc formed from the female and male genital primordia, and the anal primordium. The anal primordium develops in both sexes, forming either male or female analia. However, only one of the genital primordia develops in each sex, forming either the male or the female genitalia." ! PROPOSED: developmental process that results_in_complete_developmental_of genital disc [cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00001784])] [Term] id: GO:0035215 ! genital disc development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of FBbt:00001784 ! genital disc ! seconds spent parsing GO:0035215: 4.72 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0035216 using "haltere disc development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00001779]) [-2] ! parse: GO:0035216 using "haltere disc development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(disc, anatomy), OBO_REL:unfolds_in=FBbt:00004783]) [-6] ! no existing xp def ! def: "Progression of the haltere imaginal disc over time, from its initial formation through to its metamorphosis to form the adult capitellum, pedicel, haltere sclerite, metathoracic spiracle and metanotum." ! PROPOSED: developmental process that results_in_complete_developmental_of dorsal metathoracic disc [cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00001779])] [Term] id: GO:0035216 ! haltere disc development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of FBbt:00001779 ! dorsal metathoracic disc synonym: "dorsal metathoracic disc development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0035216: 9.26 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0035217 using "labial disc development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00001764]) [-2] ! no existing xp def ! def: "Progression of the labial imaginal disc over time, from its initial formation through to its metamorphosis to form adult structures including parts of the proboscis." ! PROPOSED: developmental process that results_in_complete_developmental_of labial disc [cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00001764])] [Term] id: GO:0035217 ! labial disc development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of FBbt:00001764 ! labial disc ! seconds spent parsing GO:0035217: 4.73 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0035218 using "leg disc development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00001780]) [-2] ! parse: GO:0035218 using "leg disc development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(disc, anatomy), OBO_REL:unfolds_in=FBbt:00004640]) [-6] ! parse: GO:0035218 using "leg disc development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(disc, anatomy), OBO_REL:unfolds_in=MA:0000047]) [-6] ! no existing xp def ! def: "Progression of the leg imaginal disc over time, from its initial formation through to its metamorphosis to form adult structures including the leg, coxa and ventral thoracic pleura." ! PROPOSED: developmental process that results_in_complete_developmental_of ventral thoracic disc [cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00001780])] [Term] id: GO:0035218 ! leg disc development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of FBbt:00001780 ! ventral thoracic disc synonym: "ventral thoracic disc development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0035218: 6.01 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0035220 using "wing disc development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00001778]) [-2] ! parse: GO:0035220 using "wing disc development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(disc, anatomy), OBO_REL:unfolds_in=FBbt:00004729]) [-6] ! no existing xp def ! def: "Progression of the wing disc over time, from its initial formation through to its metamorphosis to form adult structures including the wing hinge, wing blade and pleura." ! PROPOSED: developmental process that results_in_complete_developmental_of dorsal mesothoracic disc [cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00001778])] [Term] id: GO:0035220 ! wing disc development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of FBbt:00001778 ! dorsal mesothoracic disc synonym: "dorsal mesothoracic disc development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0035220: 5.38 ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0035221 using "genital disc pattern formation" => cdef(GO:0007389, [OBO_REL:results_in_developmental_progression_of=FBbt:00001784]) [-2] ! parse: GO:0035221 using "genital disc pattern formation" => cdef(GO:0007389, [OBO_REL:results_in_patterning_for=FBbt:00001784]) [-2] ! parse: GO:0035221 using "genital disc pattern formation" => cdef(GO:0007389, [OBO_REL:unfolds_in=FBbt:00001784]) [-2] ! parse: GO:0035221 using "genital disc pattern formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(pattern, anatomy), OBO_REL:unfolds_in=FBbt:00001784]) [-9] ! no existing xp def ! def: "The process that gives rise to the patterns of cell differentiation that will arise in the genital imaginal disc." ! PROPOSED: pattern specification process that OBO_REL:unfolds_in genital disc [cdef(GO:0007389, [OBO_REL:unfolds_in=FBbt:00001784])] [Term] id: GO:0035221 ! genital disc pattern formation intersection_of: GO:0007389 ! pattern specification process intersection_of: OBO_REL:unfolds_in FBbt:00001784 ! genital disc ! seconds spent parsing GO:0035221: 5.29 ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0035222 using "wing disc pattern formation" => cdef(GO:0007389, [OBO_REL:results_in_developmental_progression_of=FBbt:00001778]) [-2] ! parse: GO:0035222 using "wing disc pattern formation" => cdef(GO:0007389, [OBO_REL:results_in_developmental_progression_of=anon(disc, anatomy), OBO_REL:unfolds_in=FBbt:00004729]) [-6] ! parse: GO:0035222 using "wing disc pattern formation" => cdef(GO:0007389, [OBO_REL:results_in_patterning_for=FBbt:00001778]) [-2] ! parse: GO:0035222 using "wing disc pattern formation" => cdef(GO:0007389, [OBO_REL:unfolds_in=FBbt:00001778]) [-2] ! parse: GO:0035222 using "wing disc pattern formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(disc pattern, anatomy), OBO_REL:unfolds_in=FBbt:00004729]) [-14] ! parse: GO:0035222 using "wing disc pattern formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(pattern, anatomy), OBO_REL:unfolds_in=FBbt:00001778]) [-9] ! no existing xp def ! def: "The process giving rise to the pattern of cell differentiation in the wing imaginal disc." ! PROPOSED: pattern specification process that OBO_REL:unfolds_in dorsal mesothoracic disc [cdef(GO:0007389, [OBO_REL:unfolds_in=FBbt:00001778])] [Term] id: GO:0035222 ! wing disc pattern formation intersection_of: GO:0007389 ! pattern specification process intersection_of: OBO_REL:unfolds_in FBbt:00001778 ! dorsal mesothoracic disc synonym: "dorsal mesothoracic disc pattern biosynthesis" EXACT [OBOL:automatic] synonym: "dorsal mesothoracic disc pattern formation" EXACT [OBOL:automatic] synonym: "dorsal mesothoracic disc pattern specification process" EXACT [OBOL:automatic] synonym: "pattern biosynthesis in dorsal mesothoracic disc" EXACT [OBOL:automatic] synonym: "pattern biosynthesis in the dorsal mesothoracic disc" EXACT [OBOL:automatic] synonym: "pattern biosynthesis through the dorsal mesothoracic disc" EXACT [OBOL:automatic] synonym: "pattern specification process in dorsal mesothoracic disc" EXACT [OBOL:automatic] synonym: "pattern specification process in the dorsal mesothoracic disc" EXACT [OBOL:automatic] synonym: "pattern specification process through the dorsal mesothoracic disc" EXACT [OBOL:automatic] ! seconds spent parsing GO:0035222: 10.05 ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0035223 using "leg disc pattern formation" => cdef(GO:0007389, [OBO_REL:results_in_developmental_progression_of=FBbt:00001780]) [-2] ! parse: GO:0035223 using "leg disc pattern formation" => cdef(GO:0007389, [OBO_REL:results_in_developmental_progression_of=anon(disc, anatomy), OBO_REL:unfolds_in=FBbt:00004640]) [-6] ! parse: GO:0035223 using "leg disc pattern formation" => cdef(GO:0007389, [OBO_REL:results_in_developmental_progression_of=anon(disc, anatomy), OBO_REL:unfolds_in=MA:0000047]) [-6] ! parse: GO:0035223 using "leg disc pattern formation" => cdef(GO:0007389, [OBO_REL:results_in_patterning_for=FBbt:00001780]) [-2] ! parse: GO:0035223 using "leg disc pattern formation" => cdef(GO:0007389, [OBO_REL:unfolds_in=FBbt:00001780]) [-2] ! parse: GO:0035223 using "leg disc pattern formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(disc pattern, anatomy), OBO_REL:unfolds_in=FBbt:00004640]) [-14] ! parse: GO:0035223 using "leg disc pattern formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(disc pattern, anatomy), OBO_REL:unfolds_in=MA:0000047]) [-14] ! parse: GO:0035223 using "leg disc pattern formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(pattern, anatomy), OBO_REL:unfolds_in=FBbt:00001780]) [-9] ! no existing xp def ! def: "The process that gives rise to the patterns of cell differentiation in the leg imaginal disc." ! PROPOSED: pattern specification process that OBO_REL:unfolds_in ventral thoracic disc [cdef(GO:0007389, [OBO_REL:unfolds_in=FBbt:00001780])] [Term] id: GO:0035223 ! leg disc pattern formation intersection_of: GO:0007389 ! pattern specification process intersection_of: OBO_REL:unfolds_in FBbt:00001780 ! ventral thoracic disc synonym: "pattern biosynthesis in the ventral thoracic disc" EXACT [OBOL:automatic] synonym: "pattern biosynthesis in ventral thoracic disc" EXACT [OBOL:automatic] synonym: "pattern biosynthesis through the ventral thoracic disc" EXACT [OBOL:automatic] synonym: "pattern specification process in the ventral thoracic disc" EXACT [OBOL:automatic] synonym: "pattern specification process in ventral thoracic disc" EXACT [OBOL:automatic] synonym: "pattern specification process through the ventral thoracic disc" EXACT [OBOL:automatic] synonym: "ventral thoracic disc pattern biosynthesis" EXACT [OBOL:automatic] synonym: "ventral thoracic disc pattern formation" EXACT [OBOL:automatic] synonym: "ventral thoracic disc pattern specification process" EXACT [OBOL:automatic] ! seconds spent parsing GO:0035223: 6.66 ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0035224 using "genital disc anterior/posterior pattern formation" => cdef(GO:0007389, [OBO_REL:results_in_developmental_progression_of=anon(anterior/posterior, anatomy), OBO_REL:unfolds_in=FBbt:00001784]) [-20] ! parse: GO:0035224 using "genital disc anterior/posterior pattern formation" => cdef(GO:0009952, [OBO_REL:results_in_developmental_progression_of=FBbt:00001784]) [-2] ! parse: GO:0035224 using "genital disc anterior/posterior pattern formation" => cdef(GO:0009952, [OBO_REL:results_in_patterning_for=FBbt:00001784]) [-2] ! parse: GO:0035224 using "genital disc anterior/posterior pattern formation" => cdef(GO:0009952, [OBO_REL:unfolds_in=FBbt:00001784]) [-2] ! parse: GO:0035224 using "genital disc anterior/posterior pattern formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(anterior/posterior pattern, anatomy), OBO_REL:unfolds_in=FBbt:00001784]) [-28] ! no existing xp def ! def: "The establishment, maintenance and elaboration of the anterior/posterior axis of the genital disc. An anterior and posterior compartment form in each of the three genital disc primoridia (the female genital disc primordium, the male genital disc primordium and the anal primordium)." ! PROPOSED: anterior/posterior pattern formation that OBO_REL:unfolds_in genital disc [cdef(GO:0009952, [OBO_REL:unfolds_in=FBbt:00001784])] [Term] id: GO:0035224 ! genital disc anterior/posterior pattern formation intersection_of: GO:0009952 ! anterior/posterior pattern formation intersection_of: OBO_REL:unfolds_in FBbt:00001784 ! genital disc ! seconds spent parsing GO:0035224: 5.84 ! parse: GO:0035231 using "cytoneme biogenesis" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0035230]) [-2] ! no existing xp def ! def: "Formation of a cytoneme, a long, thin and polarized actin-based cytoplasmic extension that projects from a cell." ! PROPOSED: cellular component assembly that OBO_REL:results_in_creation_of cytoneme [cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0035230])] [Term] id: GO:0035231 ! cytoneme biogenesis intersection_of: GO:0022607 ! cellular component assembly intersection_of: OBO_REL:results_in_creation_of GO:0035230 ! cytoneme synonym: "assembly and maintenance of cytoneme" EXACT [OBOL:automatic] synonym: "assembly of cytoneme" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of cytoneme" EXACT [OBOL:automatic] synonym: "biogenesis of cytoneme" EXACT [OBOL:automatic] synonym: "cell structure assembly of cytoneme" EXACT [OBOL:automatic] synonym: "cellular component assembly of cytoneme" EXACT [OBOL:automatic] synonym: "complex assembly of cytoneme" EXACT [OBOL:automatic] synonym: "cytoneme assembly" EXACT [OBOL:automatic] synonym: "cytoneme assembly and maintenance" EXACT [OBOL:automatic] synonym: "cytoneme biogenesis and assembly" EXACT [OBOL:automatic] synonym: "cytoneme cell structure assembly" EXACT [OBOL:automatic] synonym: "cytoneme cellular component assembly" EXACT [OBOL:automatic] synonym: "cytoneme complex assembly" EXACT [OBOL:automatic] synonym: "cytoneme formation" EXACT [OBOL:automatic] synonym: "formation of cytoneme" EXACT [OBOL:automatic] def: "The aggregation and bonding together of a set of macromolecules to form a cytoneme" [OBOL:automatic] ! seconds spent parsing GO:0035231: 5.62 ! Already have xp for: GO:0035232 germ cell attraction ! CURRENT : positive chemotaxis that OBO_REL:results_in_movement_of germ cell [cdef(GO:0050918, [OBO_REL:results_in_movement_of=CL:0000586])] ! Already have xp for: GO:0035233 germ cell repulsion ! CURRENT : negative chemotaxis that OBO_REL:results_in_movement_of germ cell [cdef(GO:0050919, [OBO_REL:results_in_movement_of=CL:0000586])] ! Already have xp for: GO:0035234 germ cell programmed cell death ! CURRENT : programmed cell death that OBO_REL:results_in_death_of germ cell [cdef(GO:0012501, [OBO_REL:results_in_death_of=CL:0000586])] ! parse: GO:0035262 using "gonad morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00004858]) [-2] ! parse: GO:0035262 using "gonad morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0002420]) [-2] ! parse: GO:0035262 using "gonad morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0000413]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of the gonads are generated and organized. A gonad is an animal organ producing gametes, e.g. the testes or the ovary in mammals." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of gonad [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0000413])] [Term] id: GO:0035262 ! gonad morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0000413 ! gonad ! seconds spent parsing GO:0035262: 7.25 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0035263 using "genital disc sexually dimorphic development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(sexually dimorphic, anatomy), OBO_REL:unfolds_in=FBbt:00001784]) [-20] ! no existing xp def ! def: "The sex-specific patterns of primoridia growth and differentiation in the genital imaginal disc. The anal primordium of the genital disc develops in both sexes, but depending on the genetic sex gives rise to either male or female analia. Depending on the genetic sex, only one of the two genital primordia develop. In females the female genital primordium develops and gives rise to the female genitalia whereas the male primordium is repressed. Conversely, in males the male genital primordium develops and gives rise to the male genitalia whereas the female genital primordium is repressed." ! PROPOSED: developmental process that results_in_complete_developmental_of anon(sexually dimorphic, anatomy) and OBO_REL:unfolds_in genital disc [cdef(GO:0032502, [results_in_complete_developmental_of=anon(sexually dimorphic, anatomy), OBO_REL:unfolds_in=FBbt:00001784])] [Term] id: GO:0035263 ! genital disc sexually dimorphic development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of anatomy:sexually_dimorphic intersection_of: OBO_REL:unfolds_in FBbt:00001784 ! genital disc ! seconds spent parsing GO:0035263: 8.64 ! parse: GO:0035264 using "body growth" => cdef(GO:0040007, [OBO_REL:results_in_increase_in_mass_of=MA:0000004]) [-2] ! no existing xp def ! def: "The increase in size or mass of an entire multicellular organism, as opposed to cell growth." ! PROPOSED: growth that OBO_REL:results_in_increase_in_mass_of trunk [cdef(GO:0040007, [OBO_REL:results_in_increase_in_mass_of=MA:0000004])] [Term] id: GO:0035264 ! multicellular organism growth intersection_of: GO:0040007 ! growth intersection_of: OBO_REL:results_in_increase_in_mass_of MA:0000004 ! trunk synonym: "trunk growth" EXACT [OBOL:automatic] synonym: "trunk growth pattern" EXACT [OBOL:automatic] ! seconds spent parsing GO:0035264: 9.6 ! parse: GO:0035265 using "organ growth" => cdef(GO:0040007, [OBO_REL:results_in_increase_in_mass_of=PO:0009008]) [-2] ! parse: GO:0035265 using "organ growth" => cdef(GO:0040007, [OBO_REL:results_in_increase_in_mass_of=ZFA:0000496]) [-2] ! no existing xp def ! def: "The increase in size or mass of an organ. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that function together as to perform a specific function." ! PROPOSED: growth that OBO_REL:results_in_increase_in_mass_of compound organ [cdef(GO:0040007, [OBO_REL:results_in_increase_in_mass_of=ZFA:0000496])] [Term] id: GO:0035265 ! organ growth intersection_of: GO:0040007 ! growth intersection_of: OBO_REL:results_in_increase_in_mass_of ZFA:0000496 ! compound organ synonym: "compound organ growth" EXACT [OBOL:automatic] synonym: "compound organ growth pattern" EXACT [OBOL:automatic] ! seconds spent parsing GO:0035265: 6.2 ! parse: GO:0035266 using "meristem growth" => cdef(GO:0040007, [OBO_REL:results_in_increase_in_mass_of=PO:0009013]) [-2] ! no existing xp def ! def: "The increase in size or mass of a meristem, a region of tissue in a plant that is composed of one or more undifferentiated cells capable of undergoing mitosis and differentiation." ! PROPOSED: growth that OBO_REL:results_in_increase_in_mass_of meristem [cdef(GO:0040007, [OBO_REL:results_in_increase_in_mass_of=PO:0009013])] [Term] id: GO:0035266 ! meristem growth intersection_of: GO:0040007 ! growth intersection_of: OBO_REL:results_in_increase_in_mass_of PO:0009013 ! meristem ! seconds spent parsing GO:0035266: 5.15 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0035270 using "endocrine system development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00005068]) [-2] ! parse: GO:0035270 using "endocrine system development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000012]) [-2] ! parse: GO:0035270 using "endocrine system development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0001158]) [-2] ! no existing xp def ! def: "Progression of the endocrine system over time, from its formation to a mature structure. The endocrine system is a system of hormones and ductless glands, where the glands release hormones directly into the blood, lymph or other intercellular fluid, and the hormones circulate within the body to affect distant organs. The major glands that make up the human endocrine system are the hypothalamus, pituitary, thyroid, parathryoids, adrenals, pineal body, and the reproductive glands which include the ovaries and testes." ! PROPOSED: developmental process that results_in_complete_developmental_of endocrine system [cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0001158])] [Term] id: GO:0035270 ! endocrine system development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of ZFA:0001158 ! endocrine system ! seconds spent parsing GO:0035270: 6.12 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0035271 using "ring gland development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00001722]) [-2] ! no existing xp def ! def: "Progression of the ring gland over time, from its formation to a mature structure. The ring gland is a neuroendocrine organ found in higher Dipterans, which is composed of the prothoracic gland, the corpus allatum, and the corpora cardiacum. The ring gland is the site of production and release of ecdysteroids and juvenile hormones." ! PROPOSED: developmental process that results_in_complete_developmental_of ring gland [cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00001722])] [Term] id: GO:0035271 ! ring gland development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of FBbt:00001722 ! ring gland ! seconds spent parsing GO:0035271: 4.77 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0035272 using "exocrine system development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0002411]) [-2] ! no existing xp def ! def: "Progression of the exocrine system over time, from its formation to a mature structure. The exocrine system is a system of hormones and glands, where the glands secrete straight to a target site via ducts or tubes. The human exocrine system includes the salivary glands, sweat glands and many glands of the digestive system." ! PROPOSED: developmental process that results_in_complete_developmental_of exocrine system [cdef(GO:0032502, [results_in_complete_developmental_of=MA:0002411])] [Term] id: GO:0035272 ! exocrine system development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of MA:0002411 ! exocrine system ! seconds spent parsing GO:0035272: 4.76 ! parse: GO:0035277 using "spiracle morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00005054]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of a spiracle are generated and organized. Spiracles are the openings in the insect open tracheal system; externally they connect to the epidermis and internally they connect to the tracheal trunk." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of spiracle [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00005054])] [Term] id: GO:0035277 ! spiracle morphogenesis, open tracheal system intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of FBbt:00005054 ! spiracle ! seconds spent parsing GO:0035277: 14.96 ! parse: GO:0035283 using "central nervous system segmentation" => cdef(GO:0035282, [OBO_REL:results_in_developmental_progression_of=FBbt:00005094]) [-2] ! parse: GO:0035283 using "central nervous system segmentation" => cdef(GO:0035282, [OBO_REL:results_in_developmental_progression_of=MA:0000167]) [-2] ! parse: GO:0035283 using "central nervous system segmentation" => cdef(GO:0035282, [OBO_REL:results_in_developmental_progression_of=ZFA:0000012]) [-2] ! parse: GO:0035283 using "central nervous system segmentation" => cdef(GO:0035282, [OBO_REL:results_in_patterning_for=FBbt:00005094]) [-2] ! parse: GO:0035283 using "central nervous system segmentation" => cdef(GO:0035282, [OBO_REL:results_in_patterning_for=MA:0000167]) [-2] ! parse: GO:0035283 using "central nervous system segmentation" => cdef(GO:0035282, [OBO_REL:results_in_patterning_for=ZFA:0000012]) [-2] ! parse: GO:0035283 using "central nervous system segmentation" => cdef(GO:0035282, [OBO_REL:unfolds_in=FBbt:00005094]) [-2] ! parse: GO:0035283 using "central nervous system segmentation" => cdef(GO:0035282, [OBO_REL:unfolds_in=MA:0000167]) [-2] ! parse: GO:0035283 using "central nervous system segmentation" => cdef(GO:0035282, [OBO_REL:unfolds_in=ZFA:0000012]) [-2] ! no existing xp def ! def: "Division of the central nervous system into a series of semi-repetitive parts or segments." ! PROPOSED: segmentation that OBO_REL:unfolds_in central nervous system [cdef(GO:0035282, [OBO_REL:unfolds_in=ZFA:0000012])] [Term] id: GO:0035283 ! central nervous system segmentation intersection_of: GO:0035282 ! segmentation intersection_of: OBO_REL:unfolds_in ZFA:0000012 ! central nervous system synonym: "cns segmentation" EXACT [OBOL:automatic] ! seconds spent parsing GO:0035283: 7.98 ! parse: GO:0035284 using "brain segmentation" => cdef(GO:0035282, [OBO_REL:results_in_developmental_progression_of=FBbt:00005095]) [-2] ! parse: GO:0035284 using "brain segmentation" => cdef(GO:0035282, [OBO_REL:results_in_developmental_progression_of=MA:0000168]) [-2] ! parse: GO:0035284 using "brain segmentation" => cdef(GO:0035282, [OBO_REL:results_in_developmental_progression_of=ZFA:0000008]) [-2] ! parse: GO:0035284 using "brain segmentation" => cdef(GO:0035282, [OBO_REL:results_in_patterning_for=FBbt:00005095]) [-2] ! parse: GO:0035284 using "brain segmentation" => cdef(GO:0035282, [OBO_REL:results_in_patterning_for=MA:0000168]) [-2] ! parse: GO:0035284 using "brain segmentation" => cdef(GO:0035282, [OBO_REL:results_in_patterning_for=ZFA:0000008]) [-2] ! parse: GO:0035284 using "brain segmentation" => cdef(GO:0035282, [OBO_REL:unfolds_in=FBbt:00005095]) [-2] ! parse: GO:0035284 using "brain segmentation" => cdef(GO:0035282, [OBO_REL:unfolds_in=MA:0000168]) [-2] ! parse: GO:0035284 using "brain segmentation" => cdef(GO:0035282, [OBO_REL:unfolds_in=ZFA:0000008]) [-2] ! no existing xp def ! def: "Division of the brain into a series of semi-repetitive parts or segments." ! PROPOSED: segmentation that OBO_REL:unfolds_in brain [cdef(GO:0035282, [OBO_REL:unfolds_in=ZFA:0000008])] [Term] id: GO:0035284 ! brain segmentation intersection_of: GO:0035282 ! segmentation intersection_of: OBO_REL:unfolds_in ZFA:0000008 ! brain ! seconds spent parsing GO:0035284: 7.33 ! parse: GO:0035287 using "head segmentation" => cdef(GO:0035282, [OBO_REL:results_in_developmental_progression_of=FBbt:00000004]) [-2] ! parse: GO:0035287 using "head segmentation" => cdef(GO:0035282, [OBO_REL:results_in_developmental_progression_of=MA:0000023]) [-2] ! parse: GO:0035287 using "head segmentation" => cdef(GO:0035282, [OBO_REL:results_in_developmental_progression_of=ZFA:0001114]) [-2] ! parse: GO:0035287 using "head segmentation" => cdef(GO:0035282, [OBO_REL:results_in_patterning_for=FBbt:00000004]) [-2] ! parse: GO:0035287 using "head segmentation" => cdef(GO:0035282, [OBO_REL:results_in_patterning_for=MA:0000023]) [-2] ! parse: GO:0035287 using "head segmentation" => cdef(GO:0035282, [OBO_REL:results_in_patterning_for=ZFA:0001114]) [-2] ! parse: GO:0035287 using "head segmentation" => cdef(GO:0035282, [OBO_REL:unfolds_in=FBbt:00000004]) [-2] ! parse: GO:0035287 using "head segmentation" => cdef(GO:0035282, [OBO_REL:unfolds_in=MA:0000023]) [-2] ! parse: GO:0035287 using "head segmentation" => cdef(GO:0035282, [OBO_REL:unfolds_in=ZFA:0001114]) [-2] ! no existing xp def ! def: "Partitioning the head anlage into a fixed number of segmental units. The number of segments composing the insect head has long been a subject of debate, but it is generally agreed that there are 6 or 7 segments. From anterior to posterior the head segments are the procephalic segments (labral, (ocular), antennal and intercalary) and the gnathal segments (mandibular, maxillary and labial)." ! PROPOSED: segmentation that OBO_REL:unfolds_in head [cdef(GO:0035282, [OBO_REL:unfolds_in=ZFA:0001114])] [Term] id: GO:0035287 ! head segmentation intersection_of: GO:0035282 ! segmentation intersection_of: OBO_REL:unfolds_in ZFA:0001114 ! head ! seconds spent parsing GO:0035287: 7.33 ! parse: GO:0035290 using "trunk segmentation" => cdef(GO:0035282, [OBO_REL:results_in_developmental_progression_of=MA:0000004]) [-2] ! parse: GO:0035290 using "trunk segmentation" => cdef(GO:0035282, [OBO_REL:results_in_developmental_progression_of=ZFA:0001115]) [-2] ! parse: GO:0035290 using "trunk segmentation" => cdef(GO:0035282, [OBO_REL:results_in_patterning_for=MA:0000004]) [-2] ! parse: GO:0035290 using "trunk segmentation" => cdef(GO:0035282, [OBO_REL:results_in_patterning_for=ZFA:0001115]) [-2] ! parse: GO:0035290 using "trunk segmentation" => cdef(GO:0035282, [OBO_REL:unfolds_in=MA:0000004]) [-2] ! parse: GO:0035290 using "trunk segmentation" => cdef(GO:0035282, [OBO_REL:unfolds_in=ZFA:0001115]) [-2] ! no existing xp def ! def: "Partitioning of the blastoderm embryo into trunk segmental units. In Drosophila, the trunk segments include thoracic segments and abdominal segments A1 to A8." ! PROPOSED: segmentation that OBO_REL:unfolds_in trunk [cdef(GO:0035282, [OBO_REL:unfolds_in=ZFA:0001115])] [Term] id: GO:0035290 ! trunk segmentation intersection_of: GO:0035282 ! segmentation intersection_of: OBO_REL:unfolds_in ZFA:0001115 ! trunk ! seconds spent parsing GO:0035290: 6.26 ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0035293 using "chitin-based larval cuticle pattern formation" => cdef(GO:0007389, [OBO_REL:results_in_developmental_progression_of=anon(chitin-based larval cuticle, anatomy)]) [-28] ! parse: GO:0035293 using "chitin-based larval cuticle pattern formation" => cdef(GO:0035017, [OBO_REL:results_in_developmental_progression_of=anon(chitin-based larval, anatomy)]) [-20] ! parse: GO:0035293 using "chitin-based larval cuticle pattern formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(chitin-based larval cuticle pattern, anatomy)]) [-36] ! no existing xp def ! def: "The process that gives rise to the patterns of cell differentiation in the chitin-based larval cuticle." ! PROPOSED: cuticle pattern formation that OBO_REL:results_in_developmental_progression_of anon(chitin-based larval, anatomy) [cdef(GO:0035017, [OBO_REL:results_in_developmental_progression_of=anon(chitin-based larval, anatomy)])] [Term] id: GO:0035293 ! chitin-based larval cuticle pattern formation intersection_of: GO:0035017 ! cuticle pattern formation intersection_of: OBO_REL:results_in_developmental_progression_of anatomy:chitin_-_based_larval ! seconds spent parsing GO:0035293: 10.48 ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0035309 using "wing and notum subfield formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(and notum subfield, anatomy), OBO_REL:unfolds_in=FBbt:00004729]) [-20] ! no existing xp def ! def: "The regionalization process that subdivides the wing imaginal disc into the wing and notum (body wall) subfields, thus determining whether cells ultimately differentiate wing or notum-specific structures." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of anon(and notum subfield, anatomy) and OBO_REL:unfolds_in wing [cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(and notum subfield, anatomy), OBO_REL:unfolds_in=FBbt:00004729])] [Term] id: GO:0035309 ! wing and notum subfield formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of anatomy:and_notum_subfield intersection_of: OBO_REL:unfolds_in FBbt:00004729 ! wing ! seconds spent parsing GO:0035309: 8.96 ! parse: GO:0035310 using "notum cell fate specification" => cdef(GO:0001708, [OBO_REL:results_in_specification_of=CL:0000000, OBO_REL:unfolds_in=FBbt:00004580]) [-3] ! no existing xp def ! def: "Process by which a cell in the larval wing imaginal disc becomes capable of differentiating autonomously into a notum cell, if left in its normal environment." ! PROPOSED: cell fate specification that OBO_REL:results_in_specification_of cell and OBO_REL:unfolds_in mesothoracic tergum [cdef(GO:0001708, [OBO_REL:results_in_specification_of=CL:0000000, OBO_REL:unfolds_in=FBbt:00004580])] [Term] id: GO:0035310 ! notum cell fate specification intersection_of: GO:0001708 ! cell fate specification intersection_of: OBO_REL:results_in_specification_of CL:0000000 ! cell intersection_of: OBO_REL:unfolds_in FBbt:00004580 ! mesothoracic tergum synonym: "mesothoracic tergum cell cell fate specification" EXACT [OBOL:automatic] synonym: "mesothoracic tergum cell fate specification" EXACT [OBOL:automatic] synonym: "mesothoracic tergum cell specification" EXACT [OBOL:automatic] ! seconds spent parsing GO:0035310: 7.83 ! parse: GO:0035311 using "wing cell fate specification" => cdef(GO:0001708, [OBO_REL:results_in_specification_of=CL:0000000, OBO_REL:unfolds_in=FBbt:00004729]) [-3] ! no existing xp def ! def: "Process by which a cell in the larval wing imaginal disc becomes capable of differentiating autonomously into a wing cell, if left in its normal environment." ! PROPOSED: cell fate specification that OBO_REL:results_in_specification_of cell and OBO_REL:unfolds_in wing [cdef(GO:0001708, [OBO_REL:results_in_specification_of=CL:0000000, OBO_REL:unfolds_in=FBbt:00004729])] [Term] id: GO:0035311 ! wing cell fate specification intersection_of: GO:0001708 ! cell fate specification intersection_of: OBO_REL:results_in_specification_of CL:0000000 ! cell intersection_of: OBO_REL:unfolds_in FBbt:00004729 ! wing ! seconds spent parsing GO:0035311: 8.44 ! Already have xp for: GO:0035315 hair cell differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of hair cell [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000855])] ! No parse for: GO:0035316 non-sensory hair organization and biogenesis ! parse: GO:0035317 using "wing trichome organization and biogenesis (sensu Insecta)" => cdef(GO:0035316, [OBO_REL:results_in_developmental_progression_of=FBbt:00004729]) [-2] ! no existing xp def ! def: "A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an imaginal disc-derived wing hair. A wing hair is an actin-rich, polarized, non-sensory apical projection that protrudes from each of the approximately 30,000 wing epithelial cells." ! PROPOSED: non-sensory hair organization and biogenesis that OBO_REL:results_in_developmental_progression_of wing [cdef(GO:0035316, [OBO_REL:results_in_developmental_progression_of=FBbt:00004729])] [Term] id: GO:0035317 ! imaginal disc-derived wing hair organization and biogenesis intersection_of: GO:0035316 ! non-sensory hair organization and biogenesis intersection_of: OBO_REL:results_in_developmental_progression_of FBbt:00004729 ! wing ! seconds spent parsing GO:0035317: 44.66 ! No parse for: GO:0035318 imaginal disc-derived wing hair outgrowth ! No relation defined: results_in_increased_length_of ! No relation defined: results_in_increased_length_of ! No relation defined: results_in_increased_length_of ! No relation defined: results_in_increased_length_of ! No relation defined: results_in_increased_length_of ! No relation defined: results_in_increased_length_of ! parse: GO:0035319 using "imaginal disc-derived wing hair elongation" => cdef(GO:0008150, [results_in_increased_length_of=FBbt:00005182, OBO_REL:unfolds_in=cdef(FBbt:00001761, [OBO_REL:derives_from=FBbt:00004729])]) [-4] ! parse: GO:0035319 using "imaginal disc-derived wing hair elongation" => cdef(GO:0008150, [results_in_increased_length_of=cdef(FBbt:00001761, [OBO_REL:derives_from=FBbt:00004340])]) [-3] ! parse: GO:0035319 using "imaginal disc-derived wing hair elongation" => cdef(GO:0008150, [results_in_increased_length_of=cdef(FBbt:00001761, [OBO_REL:derives_from=cdef(FBbt:00005182, [OBO_REL:part_of=FBbt:00004729])])]) [-4] ! parse: GO:0035319 using "wing hair elongation" => cdef(GO:0008150, [results_in_increased_length_of=FBbt:00004340]) [-2] ! parse: GO:0035319 using "wing hair elongation" => cdef(GO:0008150, [results_in_increased_length_of=FBbt:00005182, OBO_REL:unfolds_in=FBbt:00004729]) [-3] ! parse: GO:0035319 using "wing hair elongation" => cdef(GO:0008150, [results_in_increased_length_of=cdef(FBbt:00005182, [OBO_REL:part_of=FBbt:00004729])]) [-3] ! no existing xp def ! def: "Growth of a prehair in the approximately 10 hour period following its emergence from an epidermal cell in an imaginal disc-derived wing. Prehair elongation is guided and/or driven by the polymerization of actin filaments and the orderly crosslinking of filaments into bundles." ! PROPOSED: biological_process that results_in_increased_length_of wing hair [cdef(GO:0008150, [results_in_increased_length_of=FBbt:00004340])] [Term] id: GO:0035319 ! imaginal disc-derived wing hair elongation intersection_of: GO:0008150 ! biological_process intersection_of: results_in_increased_length_of FBbt:00004340 ! wing hair ! seconds spent parsing GO:0035319: 34.86 ! No parse for: GO:0035320 imaginal disc-derived wing hair site selection ! Already have xp for: GO:0040001 establishment of mitotic spindle localization ! CURRENT : establishment of spindle localization that OBO_REL:part_of mitosis [cdef(GO:0051293, [OBO_REL:part_of=GO:0007067])] ! No relation defined: results_in_complete_developmental_of ! parse: GO:0040002 using "collagen and cuticulin-based cuticle development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(and cuticulin-based cuticle, anatomy), OBO_REL:unfolds_in=GO:0005581]) [-29] ! parse: GO:0040002 using "collagen and cuticulin-based cuticle development" => cdef(GO:0042335, [OBO_REL:results_in_developmental_progression_of=anon(and cuticulin-based, anatomy), OBO_REL:unfolds_in=GO:0005581]) [-21] ! no existing xp def ! def: "Synthesis and deposition of a collagen and cuticulin-based noncellular, hardened, or membranous secretion from an epithelial sheet." ! PROPOSED: cuticle development that OBO_REL:results_in_developmental_progression_of anon(and cuticulin-based, anatomy) and OBO_REL:unfolds_in collagen [cdef(GO:0042335, [OBO_REL:results_in_developmental_progression_of=anon(and cuticulin-based, anatomy), OBO_REL:unfolds_in=GO:0005581])] [Term] id: GO:0040002 ! collagen and cuticulin-based cuticle development intersection_of: GO:0042335 ! cuticle development intersection_of: OBO_REL:results_in_developmental_progression_of anatomy:and_cuticulin_-_based intersection_of: OBO_REL:unfolds_in GO:0005581 ! collagen synonym: "collagen and cuticulin-based cuticle anabolism" EXACT [OBOL:automatic] synonym: "collagen and cuticulin-based cuticle biosynthesis" EXACT [OBOL:automatic] synonym: "collagen and cuticulin-based cuticle biosynthetic process" EXACT [OBOL:automatic] synonym: "collagen and cuticulin-based cuticle formation" EXACT [OBOL:automatic] synonym: "collagen and cuticulin-based cuticle synthesis" EXACT [OBOL:automatic] synonym: "other collagen and cuticulin-based cuticle anabolism" EXACT [OBOL:automatic] synonym: "other collagen and cuticulin-based cuticle biosynthesis" EXACT [OBOL:automatic] synonym: "other collagen and cuticulin-based cuticle biosynthetic process" EXACT [OBOL:automatic] synonym: "other collagen and cuticulin-based cuticle development" EXACT [OBOL:automatic] synonym: "other collagen and cuticulin-based cuticle formation" EXACT [OBOL:automatic] synonym: "other collagen and cuticulin-based cuticle synthesis" EXACT [OBOL:automatic] ! seconds spent parsing GO:0040002: 57.58 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0040003 using "chitin-based cuticle development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(chitin-based cuticle, anatomy)]) [-21] ! parse: GO:0040003 using "chitin-based cuticle development" => cdef(GO:0042335, [OBO_REL:results_in_developmental_progression_of=anon(chitin-based, anatomy)]) [-13] ! no existing xp def ! def: "Synthesis and deposition of a chitin-based noncellular, hardened, or membranous secretion from an epithelial sheet." ! PROPOSED: cuticle development that OBO_REL:results_in_developmental_progression_of anon(chitin-based, anatomy) [cdef(GO:0042335, [OBO_REL:results_in_developmental_progression_of=anon(chitin-based, anatomy)])] [Term] id: GO:0040003 ! chitin-based cuticle development intersection_of: GO:0042335 ! cuticle development intersection_of: OBO_REL:results_in_developmental_progression_of anatomy:chitin_-_based synonym: "chitin-based cuticle anabolism" EXACT [OBOL:automatic] synonym: "chitin-based cuticle biosynthesis" EXACT [OBOL:automatic] synonym: "chitin-based cuticle biosynthetic process" EXACT [OBOL:automatic] synonym: "chitin-based cuticle formation" EXACT [OBOL:automatic] synonym: "chitin-based cuticle synthesis" EXACT [OBOL:automatic] ! seconds spent parsing GO:0040003: 0.09 ! No parse for: GO:0040004 collagen and cuticulin-based cuticle attachment to epithelium ! No parse for: GO:0040016 embryonic cleavage ! parse: GO:0040023 using "establishment of localization of nucleus" => cdef(GO:0051647, [OBO_REL:results_in_localization_of=cell:establishment_of]) [-2] ! parse: GO:0040023 using "establishment of nucleus localization" => cdef(GO:0051179, [OBO_REL:results_in_localization_of=GO:0005634, OBO_REL:unfolds_in=cell:establishment_of]) [-3] ! parse: GO:0040023 using "establishment of nucleus localization" => cdef(GO:0051647, [OBO_REL:results_in_localization_of=cell:establishment_of]) [-2] ! no existing xp def ! def: "The directed movement of the nucleus to a specific location within a cell." ! PROPOSED: nucleus localization that OBO_REL:results_in_localization_of establishment of [cdef(GO:0051647, [OBO_REL:results_in_localization_of=cell:establishment_of])] [Term] id: GO:0040023 ! establishment of nucleus localization intersection_of: GO:0051647 ! nucleus localization intersection_of: OBO_REL:results_in_localization_of cell:establishment_of ! establishment of ! seconds spent parsing GO:0040023: 48.22 ! No parse for: GO:0040025 vulval development (sensu Nematoda) ! No parse for: GO:0042049 cell acyl-CoA homeostasis ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0042051 using "compound eye photoreceptor development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=FBbt:00005162, OBO_REL:unfolds_in=FBbt:00004508]) [-3] ! parse: GO:0042051 using "compound eye photoreceptor development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=cdef(FBbt:00005162, [OBO_REL:part_of=FBbt:00004508]), OBO_REL:unfolds_in=cell:compound]) [-4] ! parse: GO:0042051 using "compound eye photoreceptor development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=cdef(FBbt:00005162, [OBO_REL:part_of=MA:0000261]), OBO_REL:unfolds_in=cell:compound]) [-4] ! parse: GO:0042051 using "compound eye photoreceptor development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=cdef(FBbt:00005162, [OBO_REL:part_of=ZFA:0000107]), OBO_REL:unfolds_in=cell:compound]) [-4] ! parse: GO:0042051 using "compound eye photoreceptor development" => cdef(GO:0032502, [and=results_in_complete_developmental_of(FBbt:00005162)/unfolds_in(FBbt:00004508), OBO_REL:unfolds_in=cell:compound]) [-3] ! parse: GO:0042051 using "compound eye photoreceptor development" => cdef(GO:0032502, [and=results_in_complete_developmental_of(FBbt:00005162)/unfolds_in(MA:0000261), OBO_REL:unfolds_in=cell:compound]) [-3] ! parse: GO:0042051 using "compound eye photoreceptor development" => cdef(GO:0032502, [and=results_in_complete_developmental_of(FBbt:00005162)/unfolds_in(ZFA:0000107), OBO_REL:unfolds_in=cell:compound]) [-3] ! parse: GO:0042051 using "compound eye photoreceptor development" => cdef(GO:0032502, [and=results_in_developmental_progression_of(FBbt:00005162)/unfolds_in(FBbt:00004508), OBO_REL:unfolds_in=cell:compound]) [-3] ! parse: GO:0042051 using "compound eye photoreceptor development" => cdef(GO:0032502, [and=results_in_developmental_progression_of(FBbt:00005162)/unfolds_in(MA:0000261), OBO_REL:unfolds_in=cell:compound]) [-3] ! parse: GO:0042051 using "compound eye photoreceptor development" => cdef(GO:0032502, [and=results_in_developmental_progression_of(FBbt:00005162)/unfolds_in(ZFA:0000107), OBO_REL:unfolds_in=cell:compound]) [-3] ! parse: GO:0042051 using "compound eye photoreceptor development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00005162, OBO_REL:unfolds_in=FBbt:00004508]) [-3] ! parse: GO:0042051 using "compound eye photoreceptor development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(FBbt:00005162, [OBO_REL:part_of=FBbt:00004508])]) [-3] ! parse: GO:0042051 using "compound eye photoreceptor development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(FBbt:00005162, [OBO_REL:part_of=FBbt:00004508]), OBO_REL:unfolds_in=cell:compound]) [-4] ! parse: GO:0042051 using "compound eye photoreceptor development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(FBbt:00005162, [OBO_REL:part_of=MA:0000261]), OBO_REL:unfolds_in=cell:compound]) [-4] ! parse: GO:0042051 using "compound eye photoreceptor development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(FBbt:00005162, [OBO_REL:part_of=ZFA:0000107]), OBO_REL:unfolds_in=cell:compound]) [-4] ! no existing xp def ! def: "The process whose specific outcome is the progression of a light-responsive receptor in the compound eye over time, from its formation to the mature structure." ! PROPOSED: developmental process that results_in_complete_developmental_of cdef(FBbt:00005162, [OBO_REL:part_of=FBbt:00004508]) [cdef(GO:0032502, [results_in_complete_developmental_of=cdef(FBbt:00005162, [OBO_REL:part_of=FBbt:00004508])])] [Term] id: GO:0042051 ! compound eye photoreceptor development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of compound_eye_photoreceptor synonym: "eye photoreceptor development" EXACT [OBOL:automatic] synonym: "photoreceptor of eye development" EXACT [OBOL:automatic] synonym: "photoreceptor of the eye development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0042051: 35.02 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0042052 using "rhabdomere development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00004212]) [-2] ! parse: GO:0042052 using "rhabdomere development" => cdef(GO:0032502, [results_in_complete_developmental_of=GO:0016028]) [-2] ! no existing xp def ! def: "The assembly and arrangement of a rhabdomere within a cell. The rhabdomere is the organelle on the apical surface of a photoreceptor cell that contains the visual pigments." ! PROPOSED: developmental process that results_in_complete_developmental_of rhabdomere [cdef(GO:0032502, [results_in_complete_developmental_of=GO:0016028])] [Term] id: GO:0042052 ! rhabdomere development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of GO:0016028 ! rhabdomere ! seconds spent parsing GO:0042052: 6.25 ! Already have xp for: GO:0042065 glial cell growth ! CURRENT : growth that OBO_REL:results_in_increase_in_mass_of glial cell [cdef(GO:0040007, [OBO_REL:results_in_increase_in_mass_of=CL:0000125])] ! Already have xp for: GO:0042070 maintenance of oocyte nucleus localization during oocyte axis determination ! CURRENT : oocyte_nucleus_attachment that OBO_REL:part_of oocyte axis determination [cdef(oocyte_nucleus_attachment, [OBO_REL:part_of=GO:0007309])] ! Already have xp for: GO:0042074 cell migration involved in gastrulation ! CURRENT : cell migration that OBO_REL:part_of gastrulation [cdef(GO:0016477, [OBO_REL:part_of=GO:0007369])] ! Already have xp for: GO:0042078 germ-line stem cell division ! CURRENT : stem cell division that OBO_REL:results_in_division_of germ-line [cdef(GO:0017145, [OBO_REL:results_in_division_of=cell:germ_-_line])] ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0042090 using "interleukin-12 formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(interleukin-1 2, anatomy)]) [-16] ! no existing xp def ! def: "The chemical reactions and pathways resulting in the formation of interleukin-12." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of anon(interleukin-1 2, anatomy) [cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(interleukin-1 2, anatomy)])] [Term] id: GO:0042090 ! interleukin-12 biosynthetic process intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of anatomy:interleukin_-_1_2 synonym: "interleukin-1 2 anatomical structure formation" EXACT [OBOL:automatic] synonym: "interleukin-1 2 formation" EXACT [OBOL:automatic] synonym: "interleukin-1 2 formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0042090: 30.55 ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0042091 using "interleukin-10 formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(interleukin-1 0, anatomy)]) [-16] ! no existing xp def ! def: "The chemical reactions and pathways resulting in the formation of interleukin-10." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of anon(interleukin-1 0, anatomy) [cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(interleukin-1 0, anatomy)])] [Term] id: GO:0042091 ! interleukin-10 biosynthetic process intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of anatomy:interleukin_-_1_0 synonym: "interleukin-1 0 anatomical structure formation" EXACT [OBOL:automatic] synonym: "interleukin-1 0 formation" EXACT [OBOL:automatic] synonym: "interleukin-1 0 formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0042091: 30.49 ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0042094 using "interleukin-2 formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(interleukin-2, anatomy)]) [-14] ! no existing xp def ! def: "The chemical reactions and pathways resulting in the formation of interleukin-2." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of anon(interleukin-2, anatomy) [cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(interleukin-2, anatomy)])] [Term] id: GO:0042094 ! interleukin-2 biosynthetic process intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of anatomy:interleukin_-_2 synonym: "interleukin-2 anatomical structure formation" EXACT [OBOL:automatic] synonym: "interleukin-2 formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0042094: 30.29 ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0042095 using "interferon-gamma formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(interferon-gamma, anatomy)]) [-17] ! no existing xp def ! def: "The chemical reactions and pathways resulting in the formation of interferon-gamma." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of anon(interferon-gamma, anatomy) [cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(interferon-gamma, anatomy)])] [Term] id: GO:0042095 ! interferon-gamma biosynthetic process intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of anatomy:interferon_-_gamma synonym: "interferon-gamma anatomical structure formation" EXACT [OBOL:automatic] synonym: "interferon-gamma formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0042095: 38.99 ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0042097 using "interleukin-4 formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(interleukin-4, anatomy)]) [-14] ! no existing xp def ! def: "The chemical reactions and pathways resulting in the formation of interleukin-4." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of anon(interleukin-4, anatomy) [cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(interleukin-4, anatomy)])] [Term] id: GO:0042097 ! interleukin-4 biosynthetic process intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of anatomy:interleukin_-_4 synonym: "interleukin-4 anatomical structure formation" EXACT [OBOL:automatic] synonym: "interleukin-4 formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0042097: 30.3 ! Already have xp for: GO:0042098 T cell proliferation ! CURRENT : cell proliferation that OBO_REL:increases_population_size_of T cell [cdef(GO:0008283, [OBO_REL:increases_population_size_of=CL:0000084])] ! Already have xp for: GO:0042100 B cell proliferation ! CURRENT : cell proliferation that OBO_REL:increases_population_size_of B cell [cdef(GO:0008283, [OBO_REL:increases_population_size_of=CL:0000236])] ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0042109 using "lymphotoxin A formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(lymphotoxin A, anatomy)]) [-14] ! no existing xp def ! def: "The chemical reactions and pathways resulting in the formation of the cytokine lymphotoxin A." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of anon(lymphotoxin A, anatomy) [cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(lymphotoxin A, anatomy)])] [Term] id: GO:0042109 ! lymphotoxin A biosynthetic process intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of anatomy:lymphotoxin_A synonym: "lymphotoxin A anatomical structure formation" EXACT [OBOL:automatic] synonym: "lymphotoxin A formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0042109: 65.66 ! Already have xp for: GO:0042110 T cell activation ! CURRENT : cell activation that OBO_REL:results_in_change_to T cell [cdef(GO:0001775, [OBO_REL:results_in_change_to=CL:0000084])] ! Already have xp for: GO:0042113 B cell activation ! CURRENT : cell activation that OBO_REL:results_in_change_to B cell [cdef(GO:0001775, [OBO_REL:results_in_change_to=CL:0000236])] ! Already have xp for: GO:0042116 macrophage activation ! CURRENT : cell activation that OBO_REL:results_in_change_to macrophage [cdef(GO:0001775, [OBO_REL:results_in_change_to=CL:0000235])] ! Already have xp for: GO:0042117 monocyte activation ! CURRENT : cell activation that OBO_REL:results_in_change_to monocyte [cdef(GO:0001775, [OBO_REL:results_in_change_to=CL:0000576])] ! Already have xp for: GO:0042118 endothelial cell activation ! CURRENT : cell activation that OBO_REL:results_in_change_to endothelial cell [cdef(GO:0001775, [OBO_REL:results_in_change_to=CL:0000115])] ! Already have xp for: GO:0042119 neutrophil activation ! CURRENT : cell activation that OBO_REL:results_in_change_to neutrophil [cdef(GO:0001775, [OBO_REL:results_in_change_to=CL:0000775])] ! No parse for: GO:0042144 vacuole fusion, non-autophagic ! No parse for: GO:0042149 cellular response to glucose starvation ! Already have xp for: GO:0042173 regulation of sporulation ! CURRENT : biological regulation that OBO_REL:regulates sporulation and regulates sporulation [cdef(GO:0065007, [OBO_REL:regulates=GO:0030435, regulates=GO:0030435])] ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0042222 using "interleukin-1 formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(interleukin-1, anatomy)]) [-14] ! no existing xp def ! def: "The chemical reactions and pathways resulting in the formation of interleukin-1, an interleukin produced mainly by activated macrophages. It is involved in the inflammatory response, and is identified as an endogenous pyrogen." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of anon(interleukin-1, anatomy) [cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(interleukin-1, anatomy)])] [Term] id: GO:0042222 ! interleukin-1 biosynthetic process intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of anatomy:interleukin_-_1 synonym: "interleukin-1 anatomical structure formation" EXACT [OBOL:automatic] synonym: "interleukin-1 formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0042222: 30.27 ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0042223 using "interleukin-3 formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(interleukin-3, anatomy)]) [-14] ! no existing xp def ! def: "The chemical reactions and pathways resulting in the formation of interleukin-3." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of anon(interleukin-3, anatomy) [cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(interleukin-3, anatomy)])] [Term] id: GO:0042223 ! interleukin-3 biosynthetic process intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of anatomy:interleukin_-_3 synonym: "interleukin-3 anatomical structure formation" EXACT [OBOL:automatic] synonym: "interleukin-3 formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0042223: 30.31 ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0042225 using "interleukin-5 formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(interleukin-5, anatomy)]) [-14] ! no existing xp def ! def: "The chemical reactions and pathways resulting in the formation of interleukin-5." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of anon(interleukin-5, anatomy) [cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(interleukin-5, anatomy)])] [Term] id: GO:0042225 ! interleukin-5 biosynthetic process intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of anatomy:interleukin_-_5 synonym: "interleukin-5 anatomical structure formation" EXACT [OBOL:automatic] synonym: "interleukin-5 formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0042225: 30.3 ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0042226 using "interleukin-6 formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(interleukin-6, anatomy)]) [-14] ! no existing xp def ! def: "The chemical reactions and pathways resulting in the formation of interleukin-6." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of anon(interleukin-6, anatomy) [cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(interleukin-6, anatomy)])] [Term] id: GO:0042226 ! interleukin-6 biosynthetic process intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of anatomy:interleukin_-_6 synonym: "interleukin-6 anatomical structure formation" EXACT [OBOL:automatic] synonym: "interleukin-6 formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0042226: 30.32 ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0042227 using "interleukin-7 formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(interleukin-7, anatomy)]) [-14] ! no existing xp def ! def: "The chemical reactions and pathways resulting in the formation of interleukin-7." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of anon(interleukin-7, anatomy) [cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(interleukin-7, anatomy)])] [Term] id: GO:0042227 ! interleukin-7 biosynthetic process intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of anatomy:interleukin_-_7 synonym: "interleukin-7 anatomical structure formation" EXACT [OBOL:automatic] synonym: "interleukin-7 formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0042227: 30.27 ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0042228 using "interleukin-8 formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(interleukin-8, anatomy)]) [-14] ! no existing xp def ! def: "The chemical reactions and pathways resulting in the formation of interleukin-8." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of anon(interleukin-8, anatomy) [cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(interleukin-8, anatomy)])] [Term] id: GO:0042228 ! interleukin-8 biosynthetic process intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of anatomy:interleukin_-_8 synonym: "interleukin-8 anatomical structure formation" EXACT [OBOL:automatic] synonym: "interleukin-8 formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0042228: 30.55 ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0042229 using "interleukin-9 formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(interleukin-9, anatomy)]) [-14] ! no existing xp def ! def: "The chemical reactions and pathways resulting in the formation of interleukin-9." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of anon(interleukin-9, anatomy) [cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(interleukin-9, anatomy)])] [Term] id: GO:0042229 ! interleukin-9 biosynthetic process intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of anatomy:interleukin_-_9 synonym: "interleukin-9 anatomical structure formation" EXACT [OBOL:automatic] synonym: "interleukin-9 formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0042229: 30.71 ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0042230 using "interleukin-11 formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(interleukin-1 1, anatomy)]) [-16] ! no existing xp def ! def: "The chemical reactions and pathways resulting in the formation of interleukin-11." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of anon(interleukin-1 1, anatomy) [cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(interleukin-1 1, anatomy)])] [Term] id: GO:0042230 ! interleukin-11 biosynthetic process intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of anatomy:interleukin_-_1_1 synonym: "interleukin-1 1 anatomical structure formation" EXACT [OBOL:automatic] synonym: "interleukin-1 1 formation" EXACT [OBOL:automatic] synonym: "interleukin-1 1 formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0042230: 30.84 ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0042231 using "interleukin-13 formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(interleukin-1 3, anatomy)]) [-16] ! no existing xp def ! def: "The chemical reactions and pathways resulting in the formation of interleukin-13." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of anon(interleukin-1 3, anatomy) [cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(interleukin-1 3, anatomy)])] [Term] id: GO:0042231 ! interleukin-13 biosynthetic process intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of anatomy:interleukin_-_1_3 synonym: "interleukin-1 3 anatomical structure formation" EXACT [OBOL:automatic] synonym: "interleukin-1 3 formation" EXACT [OBOL:automatic] synonym: "interleukin-1 3 formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0042231: 30.72 ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0042232 using "interleukin-14 formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(interleukin-1 4, anatomy)]) [-16] ! no existing xp def ! def: "The chemical reactions and pathways resulting in the formation of interleukin-14." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of anon(interleukin-1 4, anatomy) [cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(interleukin-1 4, anatomy)])] [Term] id: GO:0042232 ! interleukin-14 biosynthetic process intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of anatomy:interleukin_-_1_4 synonym: "interleukin-1 4 anatomical structure formation" EXACT [OBOL:automatic] synonym: "interleukin-1 4 formation" EXACT [OBOL:automatic] synonym: "interleukin-1 4 formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0042232: 30.91 ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0042233 using "interleukin-15 formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(interleukin-1 5, anatomy)]) [-16] ! no existing xp def ! def: "The chemical reactions and pathways resulting in the formation of interleukin-15." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of anon(interleukin-1 5, anatomy) [cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(interleukin-1 5, anatomy)])] [Term] id: GO:0042233 ! interleukin-15 biosynthetic process intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of anatomy:interleukin_-_1_5 synonym: "interleukin-1 5 anatomical structure formation" EXACT [OBOL:automatic] synonym: "interleukin-1 5 formation" EXACT [OBOL:automatic] synonym: "interleukin-1 5 formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0042233: 31.16 ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0042234 using "interleukin-16 formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(interleukin-1 6, anatomy)]) [-16] ! no existing xp def ! def: "The chemical reactions and pathways resulting in the formation of interleukin-16." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of anon(interleukin-1 6, anatomy) [cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(interleukin-1 6, anatomy)])] [Term] id: GO:0042234 ! interleukin-16 biosynthetic process intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of anatomy:interleukin_-_1_6 synonym: "interleukin-1 6 anatomical structure formation" EXACT [OBOL:automatic] synonym: "interleukin-1 6 formation" EXACT [OBOL:automatic] synonym: "interleukin-1 6 formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0042234: 30.76 ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0042235 using "interleukin-17 formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(interleukin-1 7, anatomy)]) [-16] ! no existing xp def ! def: "The chemical reactions and pathways resulting in the formation of interleukin-17." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of anon(interleukin-1 7, anatomy) [cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(interleukin-1 7, anatomy)])] [Term] id: GO:0042235 ! interleukin-17 biosynthetic process intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of anatomy:interleukin_-_1_7 synonym: "interleukin-1 7 anatomical structure formation" EXACT [OBOL:automatic] synonym: "interleukin-1 7 formation" EXACT [OBOL:automatic] synonym: "interleukin-1 7 formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0042235: 30.64 ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0042236 using "interleukin-19 formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(interleukin-1 9, anatomy)]) [-16] ! no existing xp def ! def: "The chemical reactions and pathways resulting in the formation of interleukin-19." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of anon(interleukin-1 9, anatomy) [cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(interleukin-1 9, anatomy)])] [Term] id: GO:0042236 ! interleukin-19 biosynthetic process intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of anatomy:interleukin_-_1_9 synonym: "interleukin-1 9 anatomical structure formation" EXACT [OBOL:automatic] synonym: "interleukin-1 9 formation" EXACT [OBOL:automatic] synonym: "interleukin-1 9 formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0042236: 30.75 ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0042237 using "interleukin-20 formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(interleukin-2 0, anatomy)]) [-16] ! no existing xp def ! def: "The chemical reactions and pathways resulting in the formation of interleukin-20." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of anon(interleukin-2 0, anatomy) [cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(interleukin-2 0, anatomy)])] [Term] id: GO:0042237 ! interleukin-20 biosynthetic process intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of anatomy:interleukin_-_2_0 synonym: "interleukin-2 0 anatomical structure formation" EXACT [OBOL:automatic] synonym: "interleukin-2 0 formation" EXACT [OBOL:automatic] synonym: "interleukin-2 0 formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0042237: 30.71 ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0042238 using "interleukin-21 formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(interleukin-2 1, anatomy)]) [-16] ! no existing xp def ! def: "The chemical reactions and pathways resulting in the formation of interleukin-21." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of anon(interleukin-2 1, anatomy) [cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(interleukin-2 1, anatomy)])] [Term] id: GO:0042238 ! interleukin-21 biosynthetic process intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of anatomy:interleukin_-_2_1 synonym: "interleukin-2 1 anatomical structure formation" EXACT [OBOL:automatic] synonym: "interleukin-2 1 formation" EXACT [OBOL:automatic] synonym: "interleukin-2 1 formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0042238: 30.76 ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0042239 using "interleukin-22 formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(interleukin-2 2, anatomy)]) [-16] ! no existing xp def ! def: "The chemical reactions and pathways resulting in the formation of interleukin-22." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of anon(interleukin-2 2, anatomy) [cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(interleukin-2 2, anatomy)])] [Term] id: GO:0042239 ! interleukin-22 biosynthetic process intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of anatomy:interleukin_-_2_2 synonym: "interleukin-2 2 anatomical structure formation" EXACT [OBOL:automatic] synonym: "interleukin-2 2 formation" EXACT [OBOL:automatic] synonym: "interleukin-2 2 formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0042239: 30.69 ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0042240 using "interleukin-23 formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(interleukin-2 3, anatomy)]) [-16] ! no existing xp def ! def: "The chemical reactions and pathways resulting in the formation of interleukin-23." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of anon(interleukin-2 3, anatomy) [cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(interleukin-2 3, anatomy)])] [Term] id: GO:0042240 ! interleukin-23 biosynthetic process intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of anatomy:interleukin_-_2_3 synonym: "interleukin-2 3 anatomical structure formation" EXACT [OBOL:automatic] synonym: "interleukin-2 3 formation" EXACT [OBOL:automatic] synonym: "interleukin-2 3 formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0042240: 30.69 ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0042241 using "interleukin-18 formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(interleukin-1 8, anatomy)]) [-16] ! no existing xp def ! def: "The chemical reactions and pathways resulting in the formation of interleukin-18." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of anon(interleukin-1 8, anatomy) [cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(interleukin-1 8, anatomy)])] [Term] id: GO:0042241 ! interleukin-18 biosynthetic process intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of anatomy:interleukin_-_1_8 synonym: "interleukin-1 8 anatomical structure formation" EXACT [OBOL:automatic] synonym: "interleukin-1 8 formation" EXACT [OBOL:automatic] synonym: "interleukin-1 8 formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0042241: 30.68 ! No parse for: GO:0042243 spore wall assembly (sensu Bacteria) ! Already have xp for: GO:0042244 spore wall assembly ! CURRENT : cellular component assembly that OBO_REL:results_in_creation_of spore wall [cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0031160])] ! parse: GO:0042246 using "tissue regeneration" => cdef(GO:0031099, [OBO_REL:results_in_developmental_progression_of=PO:0009007]) [-2] ! no existing xp def ! def: "The regrowth of lost or destroyed tissues." ! PROPOSED: regeneration that OBO_REL:results_in_developmental_progression_of tissue [cdef(GO:0031099, [OBO_REL:results_in_developmental_progression_of=PO:0009007])] [Term] id: GO:0042246 ! tissue regeneration intersection_of: GO:0031099 ! regeneration intersection_of: OBO_REL:results_in_developmental_progression_of PO:0009007 ! tissue ! seconds spent parsing GO:0042246: 5.21 ! Already have xp for: GO:0042253 granulocyte macrophage colony-stimulating factor biosynthetic process ! CURRENT : biosynthetic process that OBO_REL:results_in_creation_of GMC-SF [cdef(GO:0009058, [OBO_REL:results_in_creation_of=cell:GMC_-_SF])] ! parse: GO:0042254 using "ribosome biogenesis" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0005840]) [-2] ! parse: GO:0042254 using "ribosome biogenesis and assembly" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0005840]) [-2] ! no existing xp def ! def: "The process of the formation of the constituents of the ribosome subunits, their assembly, and their transport to the sites of protein synthesis." ! PROPOSED: cellular component assembly that OBO_REL:results_in_creation_of ribosome [cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0005840])] [Term] id: GO:0042254 ! ribosome biogenesis and assembly intersection_of: GO:0022607 ! cellular component assembly intersection_of: OBO_REL:results_in_creation_of GO:0005840 ! ribosome synonym: "assembly and maintenance of ribosome" EXACT [OBOL:automatic] synonym: "assembly of ribosome" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of ribosome" EXACT [OBOL:automatic] synonym: "biogenesis of ribosome" EXACT [OBOL:automatic] synonym: "cell structure assembly of ribosome" EXACT [OBOL:automatic] synonym: "cellular component assembly of ribosome" EXACT [OBOL:automatic] synonym: "complex assembly of ribosome" EXACT [OBOL:automatic] synonym: "formation of ribosome" EXACT [OBOL:automatic] synonym: "ribosome assembly" EXACT [OBOL:automatic] synonym: "ribosome assembly and maintenance" EXACT [OBOL:automatic] synonym: "ribosome cell structure assembly" EXACT [OBOL:automatic] synonym: "ribosome cellular component assembly" EXACT [OBOL:automatic] synonym: "ribosome complex assembly" EXACT [OBOL:automatic] synonym: "ribosome formation" EXACT [OBOL:automatic] def: "The aggregation and bonding together of a set of macromolecules to form a ribosome" [OBOL:automatic] ! seconds spent parsing GO:0042254: 16.55 ! parse: GO:0042255 using "ribosome assembly" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0005840]) [-2] ! no existing xp def ! def: "The aggregation and bonding together of the mature ribosome and of its subunits." ! PROPOSED: cellular component assembly that OBO_REL:results_in_creation_of ribosome [cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0005840])] [Term] id: GO:0042255 ! ribosome assembly intersection_of: GO:0022607 ! cellular component assembly intersection_of: OBO_REL:results_in_creation_of GO:0005840 ! ribosome synonym: "assembly and maintenance of ribosome" EXACT [OBOL:automatic] synonym: "assembly of ribosome" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of ribosome" EXACT [OBOL:automatic] synonym: "biogenesis of ribosome" EXACT [OBOL:automatic] synonym: "cell structure assembly of ribosome" EXACT [OBOL:automatic] synonym: "cellular component assembly of ribosome" EXACT [OBOL:automatic] synonym: "complex assembly of ribosome" EXACT [OBOL:automatic] synonym: "formation of ribosome" EXACT [OBOL:automatic] synonym: "ribosome assembly and maintenance" EXACT [OBOL:automatic] synonym: "ribosome biogenesis" EXACT [OBOL:automatic] synonym: "ribosome biogenesis and assembly" EXACT [OBOL:automatic] synonym: "ribosome cell structure assembly" EXACT [OBOL:automatic] synonym: "ribosome cellular component assembly" EXACT [OBOL:automatic] synonym: "ribosome complex assembly" EXACT [OBOL:automatic] synonym: "ribosome formation" EXACT [OBOL:automatic] def: "The aggregation and bonding together of a set of macromolecules to form a ribosome" [OBOL:automatic] ! seconds spent parsing GO:0042255: 5.66 ! No parse for: GO:0042257 ribosomal subunit assembly ! Already have xp for: GO:0042267 natural killer cell mediated cytotoxicity ! CURRENT : cell death that OBO_REL:mediated_by natural killer cell [cdef(GO:0008219, [OBO_REL:mediated_by=CL:0000623])] ! parse: GO:0042273 using "ribosomal large subunit biogenesis and assembly" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0015934]) [-2] ! no existing xp def ! def: "The formation of the constituents of the large ribosomal subunit, their assembly, and their transport to the sites of protein synthesis." ! PROPOSED: cellular component assembly that OBO_REL:results_in_creation_of large ribosomal subunit [cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0015934])] [Term] id: GO:0042273 ! ribosomal large subunit biogenesis and assembly intersection_of: GO:0022607 ! cellular component assembly intersection_of: OBO_REL:results_in_creation_of GO:0015934 ! large ribosomal subunit synonym: "assembly and maintenance of large ribosomal subunit" EXACT [OBOL:automatic] synonym: "assembly and maintenance of ribosomal large subunit" EXACT [OBOL:automatic] synonym: "assembly of large ribosomal subunit" EXACT [OBOL:automatic] synonym: "assembly of ribosomal large subunit" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of large ribosomal subunit" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of ribosomal large subunit" EXACT [OBOL:automatic] synonym: "biogenesis of large ribosomal subunit" EXACT [OBOL:automatic] synonym: "biogenesis of ribosomal large subunit" EXACT [OBOL:automatic] synonym: "cell structure assembly of large ribosomal subunit" EXACT [OBOL:automatic] synonym: "cell structure assembly of ribosomal large subunit" EXACT [OBOL:automatic] synonym: "cellular component assembly of large ribosomal subunit" EXACT [OBOL:automatic] synonym: "cellular component assembly of ribosomal large subunit" EXACT [OBOL:automatic] synonym: "complex assembly of large ribosomal subunit" EXACT [OBOL:automatic] synonym: "complex assembly of ribosomal large subunit" EXACT [OBOL:automatic] synonym: "formation of large ribosomal subunit" EXACT [OBOL:automatic] synonym: "formation of ribosomal large subunit" EXACT [OBOL:automatic] synonym: "large ribosomal subunit assembly" EXACT [OBOL:automatic] synonym: "large ribosomal subunit assembly and maintenance" EXACT [OBOL:automatic] synonym: "large ribosomal subunit biogenesis" EXACT [OBOL:automatic] synonym: "large ribosomal subunit biogenesis and assembly" EXACT [OBOL:automatic] synonym: "large ribosomal subunit cell structure assembly" EXACT [OBOL:automatic] synonym: "large ribosomal subunit cellular component assembly" EXACT [OBOL:automatic] synonym: "large ribosomal subunit complex assembly" EXACT [OBOL:automatic] synonym: "large ribosomal subunit formation" EXACT [OBOL:automatic] synonym: "ribosomal large subunit assembly" EXACT [OBOL:automatic] synonym: "ribosomal large subunit assembly and maintenance" EXACT [OBOL:automatic] synonym: "ribosomal large subunit biogenesis" EXACT [OBOL:automatic] synonym: "ribosomal large subunit cell structure assembly" EXACT [OBOL:automatic] synonym: "ribosomal large subunit cellular component assembly" EXACT [OBOL:automatic] synonym: "ribosomal large subunit complex assembly" EXACT [OBOL:automatic] synonym: "ribosomal large subunit formation" EXACT [OBOL:automatic] def: "The aggregation and bonding together of a set of macromolecules to form a large ribosomal subunit" [OBOL:automatic] ! seconds spent parsing GO:0042273: 7.4 ! No parse for: GO:0042274 ribosomal small subunit biogenesis and assembly ! No parse for: GO:0042316 penicillin metabolic process ! No parse for: GO:0042317 penicillin catabolic process ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0042318 using "penicillin formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(penicillin, anatomy)]) [-11] ! no existing xp def ! def: "The chemical reactions and pathways resulting in the formation of any antibiotic that contains the condensed beta-lactamthiazolidine ring system." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of anon(penicillin, anatomy) [cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(penicillin, anatomy)])] [Term] id: GO:0042318 ! penicillin biosynthetic process intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of anatomy:penicillin synonym: "penicillin anatomical structure formation" EXACT [OBOL:automatic] synonym: "penicillin formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0042318: 21.46 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0042335 using "cuticle anabolism" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=FBbt:00004970]) [-2] ! parse: GO:0042335 using "cuticle anabolism" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=MA:0002704]) [-2] ! parse: GO:0042335 using "cuticle anabolism" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=PO:0000022]) [-2] ! parse: GO:0042335 using "cuticle biosynthesis" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=FBbt:00004970]) [-2] ! parse: GO:0042335 using "cuticle biosynthesis" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=MA:0002704]) [-2] ! parse: GO:0042335 using "cuticle biosynthesis" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=PO:0000022]) [-2] ! parse: GO:0042335 using "cuticle biosynthetic process" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=FBbt:00004970]) [-2] ! parse: GO:0042335 using "cuticle biosynthetic process" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=MA:0002704]) [-2] ! parse: GO:0042335 using "cuticle biosynthetic process" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=PO:0000022]) [-2] ! parse: GO:0042335 using "cuticle development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00004970]) [-2] ! parse: GO:0042335 using "cuticle development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0002704]) [-2] ! parse: GO:0042335 using "cuticle development" => cdef(GO:0032502, [results_in_complete_developmental_of=PO:0000022]) [-2] ! parse: GO:0042335 using "cuticle formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=FBbt:00004970]) [-2] ! parse: GO:0042335 using "cuticle formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=MA:0002704]) [-2] ! parse: GO:0042335 using "cuticle formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=PO:0000022]) [-2] ! parse: GO:0042335 using "cuticle formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=FBbt:00004970]) [-2] ! parse: GO:0042335 using "cuticle formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=MA:0002704]) [-2] ! parse: GO:0042335 using "cuticle formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=PO:0000022]) [-2] ! parse: GO:0042335 using "cuticle synthesis" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=FBbt:00004970]) [-2] ! parse: GO:0042335 using "cuticle synthesis" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=MA:0002704]) [-2] ! parse: GO:0042335 using "cuticle synthesis" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=PO:0000022]) [-2] ! no existing xp def ! def: "The chemical reactions and pathways resulting in the formation of a cuticle, the outer layer of some animals and plants, which acts to prevent water loss." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of cuticle [cdef(GO:0048646, [OBO_REL:results_in_formation_of=PO:0000022])] [Term] id: GO:0042335 ! cuticle development intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of PO:0000022 ! cuticle ! seconds spent parsing GO:0042335: 43.2 ! No parse for: GO:0042336 protein-based cuticle development during molting ! No parse for: GO:0042337 chitin-based cuticle development during molting ! No parse for: GO:0042338 collagen and cuticulin-based cuticle development during molting ! No parse for: GO:0042381 hemolymph coagulation ! parse: GO:0042384 using "cilium biogenesis" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0005929]) [-2] ! no existing xp def ! def: "The assembly of a cilium, a specialized eukaryotic locomotor organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole." ! PROPOSED: cellular component assembly that OBO_REL:results_in_creation_of cilium [cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0005929])] [Term] id: GO:0042384 ! cilium biogenesis intersection_of: GO:0022607 ! cellular component assembly intersection_of: OBO_REL:results_in_creation_of GO:0005929 ! cilium synonym: "assembly and maintenance of cilium" EXACT [OBOL:automatic] synonym: "assembly of cilium" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of cilium" EXACT [OBOL:automatic] synonym: "biogenesis of cilium" EXACT [OBOL:automatic] synonym: "cell structure assembly of cilium" EXACT [OBOL:automatic] synonym: "cellular component assembly of cilium" EXACT [OBOL:automatic] synonym: "cilium assembly" EXACT [OBOL:automatic] synonym: "cilium assembly and maintenance" EXACT [OBOL:automatic] synonym: "cilium biogenesis and assembly" EXACT [OBOL:automatic] synonym: "cilium cell structure assembly" EXACT [OBOL:automatic] synonym: "cilium cellular component assembly" EXACT [OBOL:automatic] synonym: "cilium complex assembly" EXACT [OBOL:automatic] synonym: "cilium formation" EXACT [OBOL:automatic] synonym: "complex assembly of cilium" EXACT [OBOL:automatic] synonym: "formation of cilium" EXACT [OBOL:automatic] def: "The aggregation and bonding together of a set of macromolecules to form a cilium" [OBOL:automatic] ! seconds spent parsing GO:0042384: 9.92 ! parse: GO:0042386 using "hemocyte differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(hemocyte, cell)]) [-9] ! no existing xp def ! def: "The process whereby a relatively unspecialized cell acquires the characteristics of a mature hemocyte. Hemocytes are blood cells associated with a hemocoel (the cavity containing most of the major organs of the arthropod body) which are involved in defense and clotting of hemolymph, but not involved in transport of oxygen." ! PROPOSED: cell differentiation that OBO_REL:results_in_acquisition_of_features_of anon(hemocyte, cell) [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(hemocyte, cell)])] [Term] id: GO:0042386 ! hemocyte differentiation intersection_of: GO:0030154 ! cell differentiation intersection_of: OBO_REL:results_in_acquisition_of_features_of cell:hemocyte synonym: "hemocyte cell differentiation" EXACT [OBOL:automatic] ! seconds spent parsing GO:0042386: 0.01 ! Already have xp for: GO:0042387 plasmatocyte differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of plasmatocyte [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000394])] ! No parse for: GO:0042441 eye pigment metabolic process ! Already have xp for: GO:0042461 photoreceptor cell development ! CURRENT : developmental process that OBO_REL:results_in_developmental_progression_of photoreceptor cell [cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=CL:0000210])] ! Already have xp for: GO:0042462 eye photoreceptor cell development ! CURRENT : developmental process that OBO_REL:results_in_developmental_progression_of eye photoreceptor cell [cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=CL:0000287])] ! parse: GO:0042472 using "inner ear morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000237]) [-2] ! parse: GO:0042472 using "inner ear morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0000217]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of inner ear [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0000217])] [Term] id: GO:0042472 ! inner ear morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0000217 ! inner ear synonym: "ear anatomical structure morphogenesis" EXACT [OBOL:automatic] synonym: "ear morphogenesis" EXACT [OBOL:automatic] synonym: "inner ear anatomical structure morphogenesis" EXACT [OBOL:automatic] synonym: "otic capsule anatomical structure morphogenesis" EXACT [OBOL:automatic] synonym: "otic capsule morphogenesis" EXACT [OBOL:automatic] ! seconds spent parsing GO:0042472: 6.61 ! parse: GO:0042473 using "outer ear morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000258]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of the outer ear are generated and organized. Morphogenesis pertains to the creation of form. The outer ear is the part of the ear external to the tympanum (eardrum). It consists of a tube (the external auditory meatus) that directs sound waves on to the tympanum, and may also include the external pinna, which extends beyond the skull." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of outer ear [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000258])] [Term] id: GO:0042473 ! outer ear morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of MA:0000258 ! outer ear synonym: "external ear anatomical structure morphogenesis" EXACT [OBOL:automatic] synonym: "external ear morphogenesis" EXACT [OBOL:automatic] ! seconds spent parsing GO:0042473: 5.5 ! parse: GO:0042474 using "middle ear morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000253]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of middle ear are generated and organized. Morphogenesis pertains to the creation of form. The middle ear is the air-filled cavity within the skull of vertebrates that lies between the outer ear and the inner ear. It is linked to the pharynx (and therefore to outside air) via the Eustachian tube and in mammals contains the three ear ossicles, which transmit auditory vibrations from the outer ear (via the tympanum) to the inner ear (via the oval window)." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of middle ear [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000253])] [Term] id: GO:0042474 ! middle ear morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of MA:0000253 ! middle ear synonym: "tympanic cavity anatomical structure morphogenesis" EXACT [OBOL:automatic] synonym: "tympanic cavity morphogenesis" EXACT [OBOL:automatic] ! seconds spent parsing GO:0042474: 5.46 ! No parse for: GO:0042475 odontogenesis (sensu Vertebrata) ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0042476 using "tooth development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000348]) [-2] ! parse: GO:0042476 using "tooth development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000694]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of a tooth or teeth over time, from formation to the mature structure(s)." ! PROPOSED: developmental process that results_in_complete_developmental_of ceratobranchial 5 tooth [cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000694])] [Term] id: GO:0042476 ! odontogenesis intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of ZFA:0000694 ! ceratobranchial 5 tooth synonym: "ceratobranchial 5 tooth development" EXACT [OBOL:automatic] synonym: "pharyngeal teeth development" EXACT [OBOL:automatic] synonym: "teeth development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0042476: 18.23 ! No parse for: GO:0042477 odontogenesis (sensu Protostomia) ! Already have xp for: GO:0042491 auditory receptor cell differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of auditory hair cell [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000202])] ! Already have xp for: GO:0042492 gamma-delta T cell differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of gamma-delta T cell [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000798])] ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0042533 using "tumor necrosis factor formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(tumor necrosis factor, anatomy)]) [-22] ! no existing xp def ! def: "The chemical reactions and pathways resulting in the formation of tumor necrosis factor, an inflammatory cytokine produced by macrophages/monocytes during acute inflammation and which is responsible for a diverse range of signaling events within cells, leading to necrosis or apoptosis." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of anon(tumor necrosis factor, anatomy) [cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(tumor necrosis factor, anatomy)])] [Term] id: GO:0042533 ! tumor necrosis factor biosynthetic process intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of anatomy:tumor_necrosis_factor synonym: "tumor necrosis factor anatomical structure formation" EXACT [OBOL:automatic] synonym: "tumor necrosis factor formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0042533: 60.0 ! No parse for: GO:0042545 cell wall modification ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0042546 using "cell wall anabolism" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=GO:0005618]) [-2] ! parse: GO:0042546 using "cell wall assembly" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0005618]) [-2] ! parse: GO:0042546 using "cell wall biogenesis" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0005618]) [-2] ! parse: GO:0042546 using "cell wall biosynthesis" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=GO:0005618]) [-2] ! parse: GO:0042546 using "cell wall biosynthetic process" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=GO:0005618]) [-2] ! parse: GO:0042546 using "cell wall formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=GO:0005618]) [-2] ! parse: GO:0042546 using "cell wall formation" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0005618]) [-2] ! parse: GO:0042546 using "cell wall formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0005618]) [-2] ! parse: GO:0042546 using "cell wall formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(wall, anatomy), OBO_REL:unfolds_in=CL:0000000]) [-6] ! parse: GO:0042546 using "cell wall formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(wall, anatomy), OBO_REL:unfolds_in=ZFA:0009000]) [-6] ! parse: GO:0042546 using "cell wall synthesis" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=GO:0005618]) [-2] ! no existing xp def ! def: "The chemical reactions and pathways resulting in the formation of the cell wall, the rigid or semi-rigid envelope lying outside the cell membrane of plant, fungal and most prokaryotic cells, maintaining their shape and protecting them from osmotic lysis." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of cell wall [cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0005618])] [Term] id: GO:0042546 ! cell wall biogenesis intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of GO:0005618 ! cell wall synonym: "cell wall anatomical structure formation" EXACT [OBOL:automatic] synonym: "cell wall formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0042546: 92.38 ! Already have xp for: GO:0042547 cell wall modification during multidimensional cell growth ! CURRENT : cell wall modification that OBO_REL:part_of multidimensional cell growth [cdef(GO:0042545, [OBO_REL:part_of=GO:0009825])] ! No parse for: GO:0042549 photosystem II stabilization ! No parse for: GO:0042550 photosystem I stabilization ! Already have xp for: GO:0042551 neuron maturation ! CURRENT : developmental maturation that OBO_REL:results_in_developmental_progression_of neuron [cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=CL:0000540])] ! No parse for: GO:0042574 retinal metabolic process ! No parse for: GO:0042618 poly-hydroxybutyrate metabolic process ! Already have xp for: GO:0042619 poly-hydroxybutyrate biosynthetic process ! CURRENT : biosynthetic process that OBO_REL:results_in_creation_of PHB [cdef(GO:0009058, [OBO_REL:results_in_creation_of=cell:PHB])] ! No parse for: GO:0042620 poly(3-hydroxyalkanoate) metabolic process ! Already have xp for: GO:0042621 poly(3-hydroxyalkanoate) biosynthetic process ! CURRENT : biosynthetic process that OBO_REL:results_in_creation_of poly (3-hydroxyalkanoate) [cdef(GO:0009058, [OBO_REL:results_in_creation_of=cell:poly_(_3_-_hydroxyalkanoate_)])] ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0042628 using "copulatory plug formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(copulatory plug, anatomy)]) [-16] ! parse: GO:0042628 using "mating plug formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(mating plug, anatomy)]) [-12] ! no existing xp def ! def: "The deposition of a plug of sperm or other gelatinous material into the opening of the vulva by a male at the termination of copulation. Probably acts to prevent subsequent matings by other males." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of anon(mating plug, anatomy) [cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(mating plug, anatomy)])] [Term] id: GO:0042628 ! mating plug formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of anatomy:mating_plug synonym: "mating plug anatomical structure formation" EXACT [OBOL:automatic] synonym: "mating plug formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0042628: 21.76 ! Already have xp for: GO:0042631 cellular response to water deprivation ! CURRENT : response to water deprivation that OBO_REL:part_of cellularization [cdef(GO:0009414, [OBO_REL:part_of=GO:0007349])] ! No parse for: GO:0042633 hair cycle ! No parse for: GO:0042637 catagen ! No parse for: GO:0042638 exogen ! No parse for: GO:0042639 telogen ! No parse for: GO:0042640 anagen ! Already have xp for: GO:0042667 auditory receptor cell fate specification ! CURRENT : cell fate specification that OBO_REL:results_in_specification_of auditory hair cell [cdef(GO:0001708, [OBO_REL:results_in_specification_of=CL:0000202])] ! Already have xp for: GO:0042668 auditory receptor cell fate determination ! CURRENT : cell fate determination that OBO_REL:results_in_determination_to auditory hair cell [cdef(GO:0001709, [OBO_REL:results_in_determination_to=CL:0000202])] ! Already have xp for: GO:0042670 retinal cone cell differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of retinal cone cell [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000573])] ! Already have xp for: GO:0042671 retinal cone cell fate determination ! CURRENT : cell fate determination that OBO_REL:results_in_determination_to retinal cone cell [cdef(GO:0001709, [OBO_REL:results_in_determination_to=CL:0000573])] ! Already have xp for: GO:0042672 retinal cone cell fate specification ! CURRENT : cell fate specification that OBO_REL:results_in_specification_of retinal cone cell [cdef(GO:0001708, [OBO_REL:results_in_specification_of=CL:0000573])] ! Already have xp for: GO:0042675 compound eye cone cell differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of compound eye cone [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=cell:compound_eye_cone])] ! Already have xp for: GO:0042676 compound eye cone cell fate commitment ! CURRENT : cell fate commitment that OBO_REL:results_in_commitment_to compound eye cone [cdef(GO:0045165, [OBO_REL:results_in_commitment_to=cell:compound_eye_cone])] ! Already have xp for: GO:0042679 compound eye cone cell fate specification ! CURRENT : cell fate specification that OBO_REL:results_in_specification_of compound eye cone [cdef(GO:0001708, [OBO_REL:results_in_specification_of=cell:compound_eye_cone])] ! Already have xp for: GO:0042680 compound eye cone cell fate determination ! CURRENT : cell fate determination that OBO_REL:results_in_determination_to compound eye cone [cdef(GO:0001709, [OBO_REL:results_in_determination_to=cell:compound_eye_cone])] ! Already have xp for: GO:0042684 cardioblast cell fate commitment ! CURRENT : cell fate commitment that OBO_REL:results_in_commitment_to cardioblast [cdef(GO:0045165, [OBO_REL:results_in_commitment_to=cell:cardioblast])] ! Already have xp for: GO:0042685 cardioblast cell fate specification ! CURRENT : cell fate specification that OBO_REL:results_in_specification_of cardioblast [cdef(GO:0001708, [OBO_REL:results_in_specification_of=cell:cardioblast])] ! Already have xp for: GO:0042688 crystal cell differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of crystal cell [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000392])] ! Already have xp for: GO:0042692 muscle cell differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of muscle cell [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000187])] ! Already have xp for: GO:0042693 muscle cell fate commitment ! CURRENT : cell fate commitment that OBO_REL:results_in_commitment_to muscle cell [cdef(GO:0045165, [OBO_REL:results_in_commitment_to=CL:0000187])] ! Already have xp for: GO:0042694 muscle cell fate specification ! CURRENT : cell fate specification that OBO_REL:results_in_specification_of muscle cell [cdef(GO:0001708, [OBO_REL:results_in_specification_of=CL:0000187])] ! No parse for: GO:0042699 follicle-stimulating hormone signaling pathway ! Already have xp for: GO:0042706 eye photoreceptor cell fate commitment ! CURRENT : cell fate commitment that OBO_REL:results_in_commitment_to eye photoreceptor cell [cdef(GO:0045165, [OBO_REL:results_in_commitment_to=CL:0000287])] ! No parse for: GO:0042713 sperm ejaculation ! parse: GO:0042714 using "dosage compensation complex assembly" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0046536]) [-2] ! no existing xp def ! def: "The aggregation and bonding together of proteins on DNA to form the complex that mediates dosage compensation on one or more X chromosomes." ! PROPOSED: cellular component assembly that OBO_REL:results_in_creation_of dosage compensation complex [cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0046536])] [Term] id: GO:0042714 ! dosage compensation complex assembly intersection_of: GO:0022607 ! cellular component assembly intersection_of: OBO_REL:results_in_creation_of GO:0046536 ! dosage compensation complex synonym: "assembly and maintenance of dosage compensation complex" EXACT [OBOL:automatic] synonym: "assembly of dosage compensation complex" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of dosage compensation complex" EXACT [OBOL:automatic] synonym: "biogenesis of dosage compensation complex" EXACT [OBOL:automatic] synonym: "cell structure assembly of dosage compensation complex" EXACT [OBOL:automatic] synonym: "cellular component assembly of dosage compensation complex" EXACT [OBOL:automatic] synonym: "complex assembly of dosage compensation complex" EXACT [OBOL:automatic] synonym: "dosage compensation complex assembly and maintenance" EXACT [OBOL:automatic] synonym: "dosage compensation complex biogenesis" EXACT [OBOL:automatic] synonym: "dosage compensation complex biogenesis and assembly" EXACT [OBOL:automatic] synonym: "dosage compensation complex cell structure assembly" EXACT [OBOL:automatic] synonym: "dosage compensation complex cellular component assembly" EXACT [OBOL:automatic] synonym: "dosage compensation complex complex assembly" EXACT [OBOL:automatic] synonym: "dosage compensation complex formation" EXACT [OBOL:automatic] synonym: "formation of dosage compensation complex" EXACT [OBOL:automatic] def: "The aggregation and bonding together of a set of macromolecules to form a dosage compensation complex" [OBOL:automatic] ! seconds spent parsing GO:0042714: 5.95 ! No parse for: GO:0042715 dosage compensation complex assembly during dosage compensation by hypoactivation of X chromosome ! Already have xp for: GO:0042722 alpha-beta T cell activation by superantigen ! CURRENT : alpha-beta T cell activation that OBO_REL:has_enabler superantigen [cdef(GO:0046631, [OBO_REL:has_enabler=obol:superantigen])] ! parse: GO:0042733 using "embryonic digit morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(embryonic digit, anatomy)]) [-16] ! parse: GO:0042733 using "embryonic digit morphogenesis" => cdef(cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(digit, anatomy)]), [OBO_REL:part_of=GO:0009790]) [-7] ! no existing xp def ! def: "The process, occurring in the embryo, by which the anatomical structures of the digit are generated and organized. Morphogenesis pertains to the creation of form. A digit is one of the terminal divisions of an appendage. For example a finger or toe." ! PROPOSED: cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(digit, anatomy)]) that OBO_REL:part_of embryonic development [cdef(cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(digit, anatomy)]), [OBO_REL:part_of=GO:0009790])] [Term] id: GO:0042733 ! embryonic digit morphogenesis intersection_of: digit_anatomical_structure_morphogenesis intersection_of: OBO_REL:part_of GO:0009790 ! embryonic development synonym: "embryogenesis, digit anatomical structure morphogenesis" EXACT [OBOL:automatic] synonym: "embryogenesis, digit morphogenesis" EXACT [OBOL:automatic] synonym: "embryonal development, digit anatomical structure morphogenesis" EXACT [OBOL:automatic] synonym: "embryonal development, digit morphogenesis" EXACT [OBOL:automatic] synonym: "embryonic development, digit anatomical structure morphogenesis" EXACT [OBOL:automatic] synonym: "embryonic development, digit morphogenesis" EXACT [OBOL:automatic] synonym: "embryonic digit anatomical structure morphogenesis" EXACT [OBOL:automatic] ! seconds spent parsing GO:0042733: 8.33 ! No parse for: GO:0042766 nucleosome mobilization ! No parse for: GO:0042774 plasma membrane ATP synthesis coupled electron transport ! No parse for: GO:0042775 organelle ATP synthesis coupled electron transport ! No parse for: GO:0042776 mitochondrial ATP synthesis coupled proton transport ! parse: GO:0042777 using "plasma membrane ATP synthesis coupled proton transport" => cdef(GO:0015986, [OBO_REL:results_in_creation_of=GO:0005886]) [-2] ! parse: GO:0042777 using "plasma membrane ATP synthesis coupled proton transport" => cdef(GO:0015986, [OBO_REL:results_in_creation_of=GO:0016020, OBO_REL:unfolds_in=MA:0002501]) [-3] ! parse: GO:0042777 using "plasma membrane ATP synthesis coupled proton transport" => cdef(GO:0015986, [OBO_REL:results_in_transport_of=GO:0005886]) [-2] ! parse: GO:0042777 using "plasma membrane ATP synthesis coupled proton transport" => cdef(GO:0015986, [OBO_REL:results_in_transport_of=GO:0016020, OBO_REL:unfolds_in=MA:0002501]) [-3] ! no existing xp def ! def: "The transport of protons across the plasma membrane to generate an electrochemical gradient (proton-motive force) that powers ATP synthesis." ! PROPOSED: ATP synthesis coupled proton transport that OBO_REL:results_in_transport_of plasma membrane [cdef(GO:0015986, [OBO_REL:results_in_transport_of=GO:0005886])] [Term] id: GO:0042777 ! plasma membrane ATP synthesis coupled proton transport intersection_of: GO:0015986 ! ATP synthesis coupled proton transport intersection_of: OBO_REL:results_in_transport_of GO:0005886 ! plasma membrane synonym: "cell membrane ATP synthesis coupled proton transport" EXACT [OBOL:automatic] synonym: "cytoplasmic membrane ATP synthesis coupled proton transport" EXACT [OBOL:automatic] synonym: "plasma membrane cation-transporting ATPase ATP synthesis coupled proton transport" EXACT [OBOL:automatic] synonym: "plasma membrane copper transporter ATP synthesis coupled proton transport" EXACT [OBOL:automatic] synonym: "plasma membrane long-chain fatty acid transporter ATP synthesis coupled proton transport" EXACT [OBOL:automatic] synonym: "plasmalemma ATP synthesis coupled proton transport" EXACT [OBOL:automatic] ! seconds spent parsing GO:0042777: 24.86 ! No parse for: GO:0042778 tRNA end turnover ! No parse for: GO:0042780 tRNA 3'-processing ! Already have xp for: GO:0042787 protein ubiquitination during ubiquitin-dependent protein catabolic process ! CURRENT : protein ubiquitination that OBO_REL:part_of ubiquitin-dependent protein catabolic process [cdef(GO:0016567, [OBO_REL:part_of=GO:0006511])] ! No parse for: GO:0042797 tRNA transcription from RNA polymerase III promoter ! No parse for: GO:0042902 peptidoglycan-protein cross-linking via L-threonyl-pentaglycyl-murein ! parse: GO:0042914 using "colicin transport" => cdef(GO:0006810, [OBO_REL:results_in_transport_of=GO:0046930]) [-2] ! no existing xp def ! def: "The directed movement of a colicin into, out of, within or between cells. Colicins are a group of antibiotics produced by E. coli and related species that are encoded by a group of naturally occurring plasmids, e.g. Col E1." ! PROPOSED: transport that OBO_REL:results_in_transport_of pore complex [cdef(GO:0006810, [OBO_REL:results_in_transport_of=GO:0046930])] [Term] id: GO:0042914 ! colicin transport intersection_of: GO:0006810 ! transport intersection_of: OBO_REL:results_in_transport_of GO:0046930 ! pore complex synonym: "pore complex hydrolase activity, acting on acid anhydrides, acting on GTP, involved in cellular and subcellular movement" EXACT [OBOL:automatic] synonym: "pore complex transport" EXACT [OBOL:automatic] ! seconds spent parsing GO:0042914: 7.76 ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0042964 using "thioredoxin formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(thioredoxin, anatomy)]) [-12] ! no existing xp def ! def: "The chemical reactions and pathways resulting in the formation of thioredoxin, a small disulfide-containing redox protein that serves as a general protein disulfide oxidoreductase." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of anon(thioredoxin, anatomy) [cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(thioredoxin, anatomy)])] [Term] id: GO:0042964 ! thioredoxin biosynthetic process intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of anatomy:thioredoxin synonym: "thioredoxin anatomical structure formation" EXACT [OBOL:automatic] synonym: "thioredoxin formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0042964: 21.41 ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0042965 using "glutaredoxin formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(glutaredoxin, anatomy)]) [-13] ! no existing xp def ! def: "The chemical reactions and pathways resulting in the formation of a small disulfide-containing redox protein that serves as a glutathione-disulfide oxidoreductase." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of anon(glutaredoxin, anatomy) [cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(glutaredoxin, anatomy)])] [Term] id: GO:0042965 ! glutaredoxin biosynthetic process intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of anatomy:glutaredoxin synonym: "glutaredoxin anatomical structure formation" EXACT [OBOL:automatic] synonym: "glutaredoxin formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0042965: 22.74 ! No parse for: GO:0042994 cytoplasmic sequestering of transcription factor ! No parse for: GO:0043000 Golgi to plasma membrane CFTR protein transport ! parse: GO:0043001 using "Golgi to plasma membrane protein transport" => cdef(GO:0015031, [OBO_REL:results_in_transport_from=GO:0005794, OBO_REL:results_in_transport_to=GO:0005886]) [-3] ! parse: GO:0043001 using "Golgi to plasma membrane protein transport" => cdef(GO:0015031, [and=results_in_transport_of(GO:0005886)/unfolds_in(FBbt:00002690), OBO_REL:unfolds_in=GO:0005794]) [-3] ! parse: GO:0043001 using "Golgi to plasma membrane protein transport" => cdef(GO:0015031, [and=results_in_transport_of(GO:0016020)/unfolds_in(that(MA:0002501, part_of(FBbt:00002690))), OBO_REL:unfolds_in=GO:0005794]) [-3] ! parse: GO:0043001 using "Golgi to plasma membrane protein transport" => cdef(GO:0015031, [and=and(results_in_transport_of(GO:0016020), unfolds_in(MA:0002501))/unfolds_in(FBbt:00002690), OBO_REL:unfolds_in=GO:0005794]) [-3] ! no existing xp def ! def: "The directed movement of proteins from the Golgi to the plasma membrane in transport vesicles that move from the trans-Golgi network to the plasma membrane." ! PROPOSED: protein transport that and and(results_in_transport_of(GO:0016020), unfolds_in(MA:0002501))/unfolds_in(FBbt:00002690) and OBO_REL:unfolds_in Golgi apparatus [cdef(GO:0015031, [and=and(results_in_transport_of(GO:0016020), unfolds_in(MA:0002501))/unfolds_in(FBbt:00002690), OBO_REL:unfolds_in=GO:0005794])] [Term] id: GO:0043001 ! Golgi to plasma membrane protein transport intersection_of: GO:0015031 ! protein transport intersection_of: and and(results_in_transport_of(GO:0016020), unfolds_in(MA:0002501))/unfolds_in(FBbt:00002690) intersection_of: OBO_REL:unfolds_in GO:0005794 ! Golgi apparatus ! seconds spent parsing GO:0043001: 26.06 ! No parse for: GO:0043004 cytoplasmic sequestering of CFTR protein ! No parse for: GO:0043007 maintenance of rDNA ! No relation defined: results_in_complete_developmental_of ! parse: GO:0043009 using "chordate embryonic development" => cdef(GO:0009790, [OBO_REL:results_in_developmental_progression_of=anon(chordate, anatomy)]) [-9] ! parse: GO:0043009 using "chordate embryonic development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(chordate embryonic, anatomy)]) [-19] ! no existing xp def ! def: "The process whose specific outcome is the progression of the embryo over time, from zygote formation through a stage including a notochord and neural tube until birth or egg hatching." ! PROPOSED: embryonic development that OBO_REL:results_in_developmental_progression_of anon(chordate, anatomy) [cdef(GO:0009790, [OBO_REL:results_in_developmental_progression_of=anon(chordate, anatomy)])] [Term] id: GO:0043009 ! chordate embryonic development intersection_of: GO:0009790 ! embryonic development intersection_of: OBO_REL:results_in_developmental_progression_of anatomy:chordate synonym: "chordate embryogenesis" EXACT [OBOL:automatic] synonym: "chordate embryonal development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0043009: 8.99 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0043010 using "camera-type eye development" => cdef(GO:0001654, [OBO_REL:results_in_developmental_progression_of=anon(camera-type, anatomy)]) [-12] ! parse: GO:0043010 using "camera-type eye development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(camera-type eye, anatomy)]) [-16] ! no existing xp def ! def: "The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field." ! PROPOSED: eye development that OBO_REL:results_in_developmental_progression_of anon(camera-type, anatomy) [cdef(GO:0001654, [OBO_REL:results_in_developmental_progression_of=anon(camera-type, anatomy)])] [Term] id: GO:0043010 ! camera-type eye development intersection_of: GO:0001654 ! eye development intersection_of: OBO_REL:results_in_developmental_progression_of anatomy:camera_-_type ! seconds spent parsing GO:0043010: 12.76 ! Already have xp for: GO:0043029 T cell homeostasis ! CURRENT : homeostasis of number of cells that OBO_REL:regulates_population_size_of T cell [cdef(GO:0048872, [OBO_REL:regulates_population_size_of=CL:0000084])] ! No parse for: GO:0043039 tRNA aminoacylation ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0043040 using "tRNA aminoacylation for nonribosomal peptide formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(tRNA aminoacylation for nonribosomal peptide, anatomy)]) [-45] ! no existing xp def ! def: "The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in nonribosomal peptide synthesis." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of anon(tRNA aminoacylation for nonribosomal peptide, anatomy) [cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(tRNA aminoacylation for nonribosomal peptide, anatomy)])] [Term] id: GO:0043040 ! tRNA aminoacylation for nonribosomal peptide biosynthetic process intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of anatomy:tRNA_aminoacylation_for_nonribosomal_peptide synonym: "tRNA aminoacylation for nonribosomal peptide anatomical structure formation" EXACT [OBOL:automatic] synonym: "tRNA aminoacylation for nonribosomal peptide formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0043040: 25.74 ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0043049 using "otic placode formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=ZFA:0000138]) [-2] ! parse: GO:0043049 using "otic placode formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0000138]) [-2] ! no existing xp def ! def: "The initial developmental process that will lead to the formation of the vertebrate inner ear. The otic placode forms as a thickening of the head ectoderm adjacent to the developing hindbrain." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of otic placode [cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0000138])] [Term] id: GO:0043049 ! otic placode formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of ZFA:0000138 ! otic placode synonym: "otic capsule anatomical structure formation" EXACT [OBOL:automatic] synonym: "otic capsule formation" EXACT [OBOL:automatic] synonym: "otic capsule formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0043049: 5.3 ! No parse for: GO:0043057 backward locomotion ! No parse for: GO:0043062 extracellular structure organization and biogenesis ! parse: GO:0043063 using "intercellular bridge organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0045171]) [-2] ! no existing xp def ! def: "A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the intracellular bridge." ! PROPOSED: cellular component organization and biogenesis that OBO_REL:results_in_structural_change_to intercellular bridge [cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0045171])] [Term] id: GO:0043063 ! intercellular bridge organization and biogenesis intersection_of: GO:0016043 ! cellular component organization and biogenesis intersection_of: OBO_REL:results_in_structural_change_to GO:0045171 ! intercellular bridge synonym: "intercellular bridge organization" EXACT [OBOL:automatic] ! seconds spent parsing GO:0043063: 11.31 ! parse: GO:0043064 using "flagellum organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0019861]) [-2] ! no existing xp def ! def: "A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a flagellum, a long thin projection from a cell, used in movement." ! PROPOSED: cellular component organization and biogenesis that OBO_REL:results_in_structural_change_to flagellum [cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0019861])] [Term] id: GO:0043064 ! flagellum organization and biogenesis intersection_of: GO:0016043 ! cellular component organization and biogenesis intersection_of: OBO_REL:results_in_structural_change_to GO:0019861 ! flagellum synonym: "flagellum organization" EXACT [OBOL:automatic] ! seconds spent parsing GO:0043064: 12.54 ! No parse for: GO:0043084 penile erection ! No parse for: GO:0043108 pilus retraction ! No parse for: GO:0043111 replication fork blocking ! No relation defined: results_in_contraction_of ! No relation defined: results_in_contraction_of ! parse: GO:0043133 using "hindgut contraction" => cdef(GO:0008150, [results_in_contraction_of=FBbt:00005384]) [-2] ! parse: GO:0043133 using "hindgut contraction" => cdef(GO:0008150, [results_in_contraction_of=MA:0001527]) [-2] ! no existing xp def ! def: "Constriction of the muscles in the hindgut, the posterior part of the alimentary canal, including the rectum, and the large intestine." ! PROPOSED: biological_process that results_in_contraction_of hindgut [cdef(GO:0008150, [results_in_contraction_of=MA:0001527])] [Term] id: GO:0043133 ! hindgut contraction intersection_of: GO:0008150 ! biological_process intersection_of: results_in_contraction_of MA:0001527 ! hindgut ! seconds spent parsing GO:0043133: 5.44 ! No parse for: GO:0043146 spindle stabilization ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0043149 using "stress fiber formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=GO:0001725]) [-2] ! parse: GO:0043149 using "stress fiber formation" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0001725]) [-2] ! parse: GO:0043149 using "stress fiber formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0001725]) [-2] ! parse: GO:0043149 using "stress fibre biosynthesis" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=GO:0001725]) [-2] ! parse: GO:0043149 using "stress fibre formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=GO:0001725]) [-2] ! parse: GO:0043149 using "stress fibre formation" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0001725]) [-2] ! parse: GO:0043149 using "stress fibre formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0001725]) [-2] ! no existing xp def ! def: "Assembly of a stress fiber, the bundle of microfilaments and other proteins found in fibroblasts." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of stress fiber [cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0001725])] [Term] id: GO:0043149 ! stress fiber formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of GO:0001725 ! stress fiber synonym: "stress fiber anatomical structure formation" EXACT [OBOL:automatic] synonym: "stress fiber formation of an anatomical structure" EXACT [OBOL:automatic] synonym: "stress fibre anatomical structure formation" EXACT [OBOL:automatic] synonym: "stress fibre formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0043149: 18.77 ! No parse for: GO:0043156 chromatin remodeling in response to cation stress ! No parse for: GO:0043161 proteasomal ubiquitin-dependent protein catabolic process ! No parse for: GO:0043162 ubiquitin-dependent protein catabolic process via the multivesicular body pathway ! parse: GO:0043163 using "cell envelope organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0030313]) [-2] ! parse: GO:0043163 using "cell envelope organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0031975, OBO_REL:unfolds_in=CL:0000000]) [-3] ! parse: GO:0043163 using "cell envelope organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0031975, OBO_REL:unfolds_in=ZFA:0009000]) [-3] ! parse: GO:0043163 using "cell envelope organization and biogenesis" => cdef(GO:0016043, [OBO_REL:unfolds_in=CL:0000000, OBO_REL:results_in_structural_change_to=GO:0031975]) [-3] ! no existing xp def ! def: "A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the cell envelope, everything external to, but not including, the cytoplasmic membrane of bacteria, encompassing the periplasmic space, cell wall, and outer membrane if present." ! PROPOSED: cellular component organization and biogenesis that OBO_REL:results_in_structural_change_to cell envelope [cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0030313])] [Term] id: GO:0043163 ! cell envelope organization and biogenesis intersection_of: GO:0016043 ! cellular component organization and biogenesis intersection_of: OBO_REL:results_in_structural_change_to GO:0030313 ! cell envelope synonym: "cell envelope organization" EXACT [OBOL:automatic] ! seconds spent parsing GO:0043163: 32.45 ! parse: GO:0043164 using "1-2nm peptidoglycan-based cell wall biogenesis" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0009276]) [-2] ! no existing xp def ! def: "The chemical reactions and pathways resulting in the formation of the cell wall, the rigid or semi-rigid envelope lying outside the cell membrane." ! PROPOSED: cellular component assembly that OBO_REL:results_in_creation_of 1-2nm peptidoglycan-based cell wall [cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0009276])] [Term] id: GO:0043164 ! 1-2nm peptidoglycan-based cell wall biogenesis intersection_of: GO:0022607 ! cellular component assembly intersection_of: OBO_REL:results_in_creation_of GO:0009276 ! 1-2nm peptidoglycan-based cell wall synonym: "1-2 nm peptidoglycan-based cell wall assembly" EXACT [OBOL:automatic] synonym: "1-2 nm peptidoglycan-based cell wall assembly and maintenance" EXACT [OBOL:automatic] synonym: "1-2 nm peptidoglycan-based cell wall biogenesis" EXACT [OBOL:automatic] synonym: "1-2 nm peptidoglycan-based cell wall biogenesis and assembly" EXACT [OBOL:automatic] synonym: "1-2 nm peptidoglycan-based cell wall cell structure assembly" EXACT [OBOL:automatic] synonym: "1-2 nm peptidoglycan-based cell wall cellular component assembly" EXACT [OBOL:automatic] synonym: "1-2 nm peptidoglycan-based cell wall complex assembly" EXACT [OBOL:automatic] synonym: "1-2 nm peptidoglycan-based cell wall formation" EXACT [OBOL:automatic] synonym: "assembly and maintenance of 1-2 nm peptidoglycan-based cell wall" EXACT [OBOL:automatic] synonym: "assembly and maintenance of cell wall (sensu Gram-negative Bacteria)" EXACT [OBOL:automatic] synonym: "assembly and maintenance of cell wall (sensu Proteobacteria)" EXACT [OBOL:automatic] synonym: "assembly and maintenance of cell wall inner membrane" EXACT [OBOL:automatic] synonym: "assembly and maintenance of murein sacculus" EXACT [OBOL:automatic] synonym: "assembly of 1-2 nm peptidoglycan-based cell wall" EXACT [OBOL:automatic] synonym: "assembly of cell wall (sensu Gram-negative Bacteria)" EXACT [OBOL:automatic] synonym: "assembly of cell wall (sensu Proteobacteria)" EXACT [OBOL:automatic] synonym: "assembly of cell wall inner membrane" EXACT [OBOL:automatic] synonym: "assembly of murein sacculus" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of 1-2 nm peptidoglycan-based cell wall" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of cell wall (sensu Gram-negative Bacteria)" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of cell wall (sensu Proteobacteria)" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of cell wall inner membrane" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of murein sacculus" EXACT [OBOL:automatic] synonym: "biogenesis of 1-2 nm peptidoglycan-based cell wall" EXACT [OBOL:automatic] synonym: "biogenesis of cell wall (sensu Gram-negative Bacteria)" EXACT [OBOL:automatic] synonym: "biogenesis of cell wall (sensu Proteobacteria)" EXACT [OBOL:automatic] synonym: "biogenesis of cell wall inner membrane" EXACT [OBOL:automatic] synonym: "biogenesis of murein sacculus" EXACT [OBOL:automatic] synonym: "cell structure assembly of 1-2 nm peptidoglycan-based cell wall" EXACT [OBOL:automatic] synonym: "cell structure assembly of cell wall (sensu Gram-negative Bacteria)" EXACT [OBOL:automatic] synonym: "cell structure assembly of cell wall (sensu Proteobacteria)" EXACT [OBOL:automatic] synonym: "cell structure assembly of cell wall inner membrane" EXACT [OBOL:automatic] synonym: "cell structure assembly of murein sacculus" EXACT [OBOL:automatic] synonym: "cell wall (sensu Gram-negative Bacteria) assembly" EXACT [OBOL:automatic] synonym: "cell wall (sensu Gram-negative Bacteria) assembly and maintenance" EXACT [OBOL:automatic] synonym: "cell wall (sensu Gram-negative Bacteria) biogenesis" EXACT [OBOL:automatic] synonym: "cell wall (sensu Gram-negative Bacteria) biogenesis and assembly" EXACT [OBOL:automatic] synonym: "cell wall (sensu Gram-negative Bacteria) cell structure assembly" EXACT [OBOL:automatic] synonym: "cell wall (sensu Gram-negative Bacteria) cellular component assembly" EXACT [OBOL:automatic] synonym: "cell wall (sensu Gram-negative Bacteria) complex assembly" EXACT [OBOL:automatic] synonym: "cell wall (sensu Gram-negative Bacteria) formation" EXACT [OBOL:automatic] synonym: "cell wall (sensu Proteobacteria) assembly" EXACT [OBOL:automatic] synonym: "cell wall (sensu Proteobacteria) assembly and maintenance" EXACT [OBOL:automatic] synonym: "cell wall (sensu Proteobacteria) biogenesis" EXACT [OBOL:automatic] synonym: "cell wall (sensu Proteobacteria) biogenesis and assembly" EXACT [OBOL:automatic] synonym: "cell wall (sensu Proteobacteria) cell structure assembly" EXACT [OBOL:automatic] synonym: "cell wall (sensu Proteobacteria) cellular component assembly" EXACT [OBOL:automatic] synonym: "cell wall (sensu Proteobacteria) complex assembly" EXACT [OBOL:automatic] synonym: "cell wall (sensu Proteobacteria) formation" EXACT [OBOL:automatic] synonym: "cell wall inner membrane assembly" EXACT [OBOL:automatic] synonym: "cell wall inner membrane assembly and maintenance" EXACT [OBOL:automatic] synonym: "cell wall inner membrane biogenesis" EXACT [OBOL:automatic] synonym: "cell wall inner membrane biogenesis and assembly" EXACT [OBOL:automatic] synonym: "cell wall inner membrane cell structure assembly" EXACT [OBOL:automatic] synonym: "cell wall inner membrane cellular component assembly" EXACT [OBOL:automatic] synonym: "cell wall inner membrane complex assembly" EXACT [OBOL:automatic] synonym: "cell wall inner membrane formation" EXACT [OBOL:automatic] synonym: "cellular component assembly of 1-2 nm peptidoglycan-based cell wall" EXACT [OBOL:automatic] synonym: "cellular component assembly of cell wall (sensu Gram-negative Bacteria)" EXACT [OBOL:automatic] synonym: "cellular component assembly of cell wall (sensu Proteobacteria)" EXACT [OBOL:automatic] synonym: "cellular component assembly of cell wall inner membrane" EXACT [OBOL:automatic] synonym: "cellular component assembly of murein sacculus" EXACT [OBOL:automatic] synonym: "complex assembly of 1-2 nm peptidoglycan-based cell wall" EXACT [OBOL:automatic] synonym: "complex assembly of cell wall (sensu Gram-negative Bacteria)" EXACT [OBOL:automatic] synonym: "complex assembly of cell wall (sensu Proteobacteria)" EXACT [OBOL:automatic] synonym: "complex assembly of cell wall inner membrane" EXACT [OBOL:automatic] synonym: "complex assembly of murein sacculus" EXACT [OBOL:automatic] synonym: "formation of 1-2 nm peptidoglycan-based cell wall" EXACT [OBOL:automatic] synonym: "formation of cell wall (sensu Gram-negative Bacteria)" EXACT [OBOL:automatic] synonym: "formation of cell wall (sensu Proteobacteria)" EXACT [OBOL:automatic] synonym: "formation of cell wall inner membrane" EXACT [OBOL:automatic] synonym: "formation of murein sacculus" EXACT [OBOL:automatic] synonym: "murein sacculus assembly" EXACT [OBOL:automatic] synonym: "murein sacculus assembly and maintenance" EXACT [OBOL:automatic] synonym: "murein sacculus biogenesis" EXACT [OBOL:automatic] synonym: "murein sacculus biogenesis and assembly" EXACT [OBOL:automatic] synonym: "murein sacculus cell structure assembly" EXACT [OBOL:automatic] synonym: "murein sacculus cellular component assembly" EXACT [OBOL:automatic] synonym: "murein sacculus complex assembly" EXACT [OBOL:automatic] synonym: "murein sacculus formation" EXACT [OBOL:automatic] def: "The aggregation and bonding together of a set of macromolecules to form a 1-2 nm peptidoglycan-based cell wall" [OBOL:automatic] ! seconds spent parsing GO:0043164: 199.94 ! No parse for: GO:0043165 outer membrane biogenesis (sensu ProteoBacteria) ! No parse for: GO:0043181 vacuolar sequestering ! No parse for: GO:0043182 vacuolar sequestering of sodium ion ! parse: GO:0043206 using "fibril organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0043205]) [-2] ! no existing xp def ! def: "A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of fibrils, extracellular matrix material consisting of polysaccharides and protein." ! PROPOSED: cellular component organization and biogenesis that OBO_REL:results_in_structural_change_to fibril [cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0043205])] [Term] id: GO:0043206 ! fibril organization and biogenesis intersection_of: GO:0016043 ! cellular component organization and biogenesis intersection_of: OBO_REL:results_in_structural_change_to GO:0043205 ! fibril synonym: "fibril organization" EXACT [OBOL:automatic] ! seconds spent parsing GO:0043206: 11.3 ! parse: GO:0043241 using "protein complex disassembly" => cdef(GO:0022411, [OBO_REL:results_in_breakdown_of=GO:0043234]) [-2] ! no existing xp def ! def: "The disaggregation of a protein complex into its constituent components. Protein complexes may have other associated non-protein prosthetic groups, such as nucleic acids, metal ions or carbohydrate groups." ! PROPOSED: cellular component disassembly that OBO_REL:results_in_breakdown_of protein complex [cdef(GO:0022411, [OBO_REL:results_in_breakdown_of=GO:0043234])] [Term] id: GO:0043241 ! protein complex disassembly intersection_of: GO:0022411 ! cellular component disassembly intersection_of: OBO_REL:results_in_breakdown_of GO:0043234 ! protein complex synonym: "cell structure disassembly of protein complex" EXACT [OBOL:automatic] synonym: "cellular component disassembly of protein complex" EXACT [OBOL:automatic] synonym: "disassembly of protein complex" EXACT [OBOL:automatic] synonym: "protein complex cell structure disassembly" EXACT [OBOL:automatic] synonym: "protein complex cellular component disassembly" EXACT [OBOL:automatic] ! seconds spent parsing GO:0043241: 5.67 ! No parse for: GO:0043247 telomere maintenance in response to DNA damage ! No parse for: GO:0043248 proteasome assembly ! Already have xp for: GO:0043249 erythrocyte maturation ! CURRENT : developmental maturation that OBO_REL:results_in_developmental_progression_of erythrocyte [cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=CL:0000232])] ! Already have xp for: GO:0043267 negative regulation of potassium ion transport ! CURRENT : biological regulation that OBO_REL:negatively_regulates potassium ion transport and regulates potassium ion transport [cdef(GO:0065007, [OBO_REL:negatively_regulates=GO:0006813, regulates=GO:0006813])] ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0043282 using "pharyngeal muscle development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00000487]) [-2] ! parse: GO:0043282 using "pharyngeal muscle development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00003275]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the pharyngeal muscle over time, from its formation to the mature structure. The pharyngeal muscle mediates feeding in nematodes." ! PROPOSED: developmental process that results_in_complete_developmental_of cibarial dilator muscle 11 [cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00003275])] [Term] id: GO:0043282 ! pharyngeal muscle development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of FBbt:00003275 ! cibarial dilator muscle 11 synonym: "cibarial dilator muscle 1 1 development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0043282: 5.52 ! Already have xp for: GO:0043299 leukocyte degranulation ! CURRENT : exocytosis that OBO_REL:results_in_secretion_of_granules_from leukocyte [cdef(GO:0006887, [OBO_REL:results_in_secretion_of_granules_from=CL:0000738])] ! Already have xp for: GO:0043303 mast cell degranulation ! CURRENT : exocytosis that OBO_REL:results_in_transport_of mast cell granule [cdef(GO:0006887, [OBO_REL:results_in_transport_of=GO:0042629])] ! Already have xp for: GO:0043312 neutrophil degranulation ! CURRENT : exocytosis that OBO_REL:results_in_secretion_of_granules_from neutrophil [cdef(GO:0006887, [OBO_REL:results_in_secretion_of_granules_from=CL:0000775])] ! Already have xp for: GO:0043320 natural killer cell degranulation ! CURRENT : exocytosis that OBO_REL:results_in_secretion_of_granules_from natural killer cell [cdef(GO:0006887, [OBO_REL:results_in_secretion_of_granules_from=CL:0000623])] ! No parse for: GO:0043345 neuroblast division (sensu Vertebrata) ! No parse for: GO:0043346 neuroblast division (sensu Nematoda and Protostomia) ! No parse for: GO:0043347 neuroblast fate determination (sensu Nematoda and Protostomia) ! No parse for: GO:0043348 neuroblast fate determination (sensu Vertebrata) ! No parse for: GO:0043349 neuroblast proliferation (sensu Nematoda and Protostomia) ! No parse for: GO:0043350 neuroblast proliferation (sensu Vertebrata) ! No parse for: GO:0043351 neuroblast activation (sensu Nematoda and Protostomia) ! No parse for: GO:0043352 neuroblast activation (sensu Vertebrata) ! No parse for: GO:0043357 pigment cell differentiation (sensu Nematoda and Protostomia) ! Already have xp for: GO:0043358 pigment cell differentiation (sensu Vertebrata) ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of chromatophore [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=cell:chromatophore])] ! No parse for: GO:0043359 glial cell migration (sensu Nematoda and Protostomia) ! No parse for: GO:0043360 glial cell differentiation (sensu Nematoda and Protostomia) ! No parse for: GO:0043361 glial cell fate determination (sensu Nematoda and Protostomia) ! Already have xp for: GO:0043362 nucleate erythrocyte maturation ! CURRENT : developmental maturation that OBO_REL:results_in_developmental_progression_of nucleate erythrocyte [cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=CL:0000562])] ! Already have xp for: GO:0043363 nucleate erythrocyte differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of nucleate erythrocyte [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000562])] ! Already have xp for: GO:0043379 memory T cell differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of memory T cell [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000813])] ! Already have xp for: GO:0043396 corticotropin-releasing hormone secretion ! CURRENT : secretion that OBO_REL:results_in_creation_or_release_of CRH [cdef(GO:0046903, [OBO_REL:results_in_creation_or_release_of=cell:CRH])] ! parse: GO:0043403 using "skeletal muscle regeneration" => cdef(GO:0031099, [OBO_REL:results_in_developmental_progression_of=MA:0000165]) [-2] ! no existing xp def ! def: "The regrowth of muscle tissue to repair injured or damaged muscle fibers in the postnatal stage." ! PROPOSED: regeneration that OBO_REL:results_in_developmental_progression_of skeletal muscle [cdef(GO:0031099, [OBO_REL:results_in_developmental_progression_of=MA:0000165])] [Term] id: GO:0043403 ! skeletal muscle regeneration intersection_of: GO:0031099 ! regeneration intersection_of: OBO_REL:results_in_developmental_progression_of MA:0000165 ! skeletal muscle ! seconds spent parsing GO:0043403: 5.27 ! No parse for: GO:0043480 pigment accumulation in tissues ! Already have xp for: GO:0043482 cellular pigment accumulation ! CURRENT : pigment accumulation that OBO_REL:part_of cellularization [cdef(GO:0043476, [OBO_REL:part_of=GO:0007349])] ! parse: GO:0043485 using "endosome to pigment granule transport" => cdef(GO:0006810, [OBO_REL:results_in_transport_from=GO:0005768, OBO_REL:results_in_transport_to=FBbt:00004234]) [-3] ! parse: GO:0043485 using "endosome to pigment granule transport" => cdef(GO:0006810, [OBO_REL:results_in_transport_from=GO:0005768, OBO_REL:results_in_transport_to=GO:0048770]) [-3] ! parse: GO:0043485 using "endosome to pigment granule transport" => cdef(GO:0006810, [OBO_REL:results_in_transport_of=cdef(FBbt:00004234, [OBO_REL:part_of=FBbt:00002690]), OBO_REL:unfolds_in=GO:0005768]) [-4] ! parse: GO:0043485 using "endosome to pigment granule transport" => cdef(GO:0006810, [and=results_in_transport_of(FBbt:00004234)/unfolds_in(FBbt:00002690), OBO_REL:unfolds_in=GO:0005768]) [-3] ! parse: GO:0043485 using "endosome to pigment granule transport" => cdef(GO:0006810, [and=results_in_transport_of(GO:0048770)/unfolds_in(FBbt:00002690), OBO_REL:unfolds_in=GO:0005768]) [-3] ! no existing xp def ! def: "The directed movement of substances from endosomes to pigment granules." ! PROPOSED: transport that and results_in_transport_of(GO:0048770)/unfolds_in(FBbt:00002690) and OBO_REL:unfolds_in endosome [cdef(GO:0006810, [and=results_in_transport_of(GO:0048770)/unfolds_in(FBbt:00002690), OBO_REL:unfolds_in=GO:0005768])] [Term] id: GO:0043485 ! endosome to pigment granule transport intersection_of: GO:0006810 ! transport intersection_of: and results_in_transport_of(GO:0048770)/unfolds_in(FBbt:00002690) intersection_of: OBO_REL:unfolds_in GO:0005768 ! endosome ! seconds spent parsing GO:0043485: 20.54 ! No parse for: GO:0043500 muscle plasticity ! No parse for: GO:0043501 skeletal muscle plasticity ! No parse for: GO:0043503 skeletal muscle fiber plasticity ! No parse for: GO:0043504 mitochondrial DNA repair ! Already have xp for: GO:0043524 negative regulation of neuron apoptosis ! CURRENT : biological regulation that OBO_REL:negatively_regulates neuron apoptosis and regulates neuron apoptosis [cdef(GO:0065007, [OBO_REL:negatively_regulates=GO:0051402, regulates=GO:0051402])] ! Already have xp for: GO:0043534 blood vessel endothelial cell migration ! CURRENT : cell migration that OBO_REL:results_in_movement_of blood vessel endothelial cell [cdef(GO:0016477, [OBO_REL:results_in_movement_of=CL:0000071])] ! Already have xp for: GO:0043542 endothelial cell migration ! CURRENT : cell migration that OBO_REL:results_in_movement_of endothelial cell [cdef(GO:0016477, [OBO_REL:results_in_movement_of=CL:0000115])] ! No parse for: GO:0043562 cellular response to nitrogen levels ! parse: GO:0043572 using "plastid fission" => cdef(GO:0009987, [OBO_REL:results_in_division_of=GO:0009536]) [-2] ! no existing xp def ! def: "The creation of two or more plastids by division of one plastid. A plastid is any member of a family of organelles found in the cytoplasm of plants and some protists, which are membrane-bounded and contain DNA." ! PROPOSED: cellular process that OBO_REL:results_in_division_of plastid [cdef(GO:0009987, [OBO_REL:results_in_division_of=GO:0009536])] [Term] id: GO:0043572 ! plastid fission intersection_of: GO:0009987 ! cellular process intersection_of: OBO_REL:results_in_division_of GO:0009536 ! plastid def: "The creation of two or more GO:0009536 s by division of one GO:0009536" [OBOL:automatic] ! seconds spent parsing GO:0043572: 5.62 ! parse: GO:0043573 using "leucoplast fission" => cdef(GO:0009987, [OBO_REL:results_in_division_of=GO:0009516]) [-2] ! no existing xp def ! def: "The creation of two or more leucoplasts by division of one leucoplast. A leucoplast is a colorless plastid involved in the synthesis of monoterpenes." ! PROPOSED: cellular process that OBO_REL:results_in_division_of leucoplast [cdef(GO:0009987, [OBO_REL:results_in_division_of=GO:0009516])] [Term] id: GO:0043573 ! leucoplast fission intersection_of: GO:0009987 ! cellular process intersection_of: OBO_REL:results_in_division_of GO:0009516 ! leucoplast def: "The creation of two or more GO:0009516 s by division of one GO:0009516" [OBOL:automatic] ! seconds spent parsing GO:0043573: 5.62 ! No parse for: GO:0043574 peroxisomal transport ! parse: GO:0043578 using "nuclear matrix organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0016363]) [-2] ! no existing xp def ! def: "A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the nuclear matrix, the dense fibrillar network lying on the inner side of the nuclear membrane." ! PROPOSED: cellular component organization and biogenesis that OBO_REL:results_in_structural_change_to nuclear matrix [cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0016363])] [Term] id: GO:0043578 ! nuclear matrix organization and biogenesis intersection_of: GO:0016043 ! cellular component organization and biogenesis intersection_of: OBO_REL:results_in_structural_change_to GO:0016363 ! nuclear matrix synonym: "nuclear matrix organization" EXACT [OBOL:automatic] ! seconds spent parsing GO:0043578: 11.29 ! parse: GO:0043579 using "elaioplast organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0009545]) [-2] ! no existing xp def ! def: "A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an elaioplast, a leucoplast in which oil is stored." ! PROPOSED: cellular component organization and biogenesis that OBO_REL:results_in_structural_change_to elaioplast [cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0009545])] [Term] id: GO:0043579 ! elaioplast organization and biogenesis intersection_of: GO:0016043 ! cellular component organization and biogenesis intersection_of: OBO_REL:results_in_structural_change_to GO:0009545 ! elaioplast synonym: "elaioplast organization" EXACT [OBOL:automatic] ! seconds spent parsing GO:0043579: 11.27 ! parse: GO:0043580 using "periplasmic space organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0042597]) [-2] ! no existing xp def ! def: "A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the periplasmic space, the region between the inner (cytoplasmic) and outer membrane in Gram-negative bacteria, or the inner membrane and cell wall in fungi." ! PROPOSED: cellular component organization and biogenesis that OBO_REL:results_in_structural_change_to periplasmic space [cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0042597])] [Term] id: GO:0043580 ! periplasmic space organization and biogenesis intersection_of: GO:0016043 ! cellular component organization and biogenesis intersection_of: OBO_REL:results_in_structural_change_to GO:0042597 ! periplasmic space synonym: "periplasm organization" EXACT [OBOL:automatic] synonym: "periplasm organization and biogenesis" EXACT [OBOL:automatic] synonym: "periplasmic space organization" EXACT [OBOL:automatic] ! seconds spent parsing GO:0043580: 5.68 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0043584 using "nasus development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(nasus, anatomy)]) [-6] ! parse: GO:0043584 using "nose development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000281]) [-2] ! parse: GO:0043584 using "nose development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000047]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the nose over time, from its formation to the mature structure. The nose is the specialized structure of the face that serves as the organ of the sense of smell and as part of the respiratory system. Includes the nasi externus (external nose) and cavitas nasi (nasal cavity)." ! PROPOSED: developmental process that results_in_complete_developmental_of peripheral olfactory organ [cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000047])] [Term] id: GO:0043584 ! nose development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of ZFA:0000047 ! peripheral olfactory organ synonym: "peripheral olfactory organ development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0043584: 9.56 ! parse: GO:0043585 using "nasus morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(nasus, anatomy)]) [-6] ! parse: GO:0043585 using "nose morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000281]) [-2] ! parse: GO:0043585 using "nose morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0000047]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of the nose are generated and organized. Morphogenesis pertains to the creation of form. The nose is the specialized structure of the face that serves as the organ of the sense of smell and as part of the respiratory system. Includes the nasi externus (external nose) and cavitas nasi (nasal cavity)." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of peripheral olfactory organ [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0000047])] [Term] id: GO:0043585 ! nose morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0000047 ! peripheral olfactory organ synonym: "peripheral olfactory organ anatomical structure morphogenesis" EXACT [OBOL:automatic] synonym: "peripheral olfactory organ morphogenesis" EXACT [OBOL:automatic] ! seconds spent parsing GO:0043585: 10.5 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0043586 using "tongue development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000347]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the tongue over time, from its formation to the mature structure. The tongue is the movable, muscular organ on the floor of the mouth of most vertebrates, in man other mammals is the principal organ of taste, aids in the prehension of food, in swallowing, and in modifying the voice as in speech." ! PROPOSED: developmental process that results_in_complete_developmental_of tongue [cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000347])] [Term] id: GO:0043586 ! tongue development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of MA:0000347 ! tongue ! seconds spent parsing GO:0043586: 4.76 ! parse: GO:0043587 using "lingua morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(lingua, anatomy)]) [-7] ! parse: GO:0043587 using "tongue morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000347]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of the tongue are generated and organized. Morphogenesis pertains to the creation of form. The tongue is the movable, muscular organ on the floor of the mouth of most vertebrates, in man other mammals is the principal organ of taste, aids in the prehension of food, in swallowing, and in modifying the voice as in speech." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of tongue [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000347])] [Term] id: GO:0043587 ! tongue morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of MA:0000347 ! tongue ! seconds spent parsing GO:0043587: 9.43 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0043588 using "animal skin development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(animal skin, anatomy)]) [-12] ! parse: GO:0043588 using "skin development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000151]) [-2] ! parse: GO:0043588 using "skin development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000368]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the skin over time, from its formation to the mature structure. The skin is the external membranous integument of an animal. In vertebrates the skin generally consists of two layers, an outer nonsensitive and nonvascular epidermis (cuticle or skarfskin) composed of cells which are constantly growing and multiplying in the deeper, and being thrown off in the superficial layers, as well as an inner vascular dermis (cutis, corium or true skin) composed mostly of connective tissue." ! PROPOSED: developmental process that results_in_complete_developmental_of integument [cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000368])] [Term] id: GO:0043588 ! skin development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of ZFA:0000368 ! integument synonym: "integument development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0043588: 9.92 ! parse: GO:0043589 using "skin morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000151]) [-2] ! parse: GO:0043589 using "skin morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0000368]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of the skin are generated and organized. Morphogenesis pertains to the creation of form. The skin is the external membranous integument of an animal. In vertebrates the skin generally consists of two layers, an outer nonsensitive and nonvascular epidermis (cuticle or skarfskin) composed of cells which are constantly growing and multiplying in the deeper, and being thrown off in the superficial layers, as well as an inner, sensitive and vascular dermis (cutis, corium or true skin) composed mostly of connective tissue." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of integument [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0000368])] [Term] id: GO:0043589 ! skin morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0000368 ! integument synonym: "integument anatomical structure morphogenesis" EXACT [OBOL:automatic] synonym: "integument morphogenesis" EXACT [OBOL:automatic] ! seconds spent parsing GO:0043589: 6.23 ! Already have xp for: GO:0043615 astrocyte cell migration ! CURRENT : cell migration that OBO_REL:results_in_movement_of astrocyte [cdef(GO:0016477, [OBO_REL:results_in_movement_of=CL:0000127])] ! Already have xp for: GO:0043616 keratinocyte proliferation ! CURRENT : cell proliferation that OBO_REL:increases_population_size_of keratinocyte [cdef(GO:0008283, [OBO_REL:increases_population_size_of=CL:0000312])] ! No parse for: GO:0043617 cellular response to sucrose starvation ! parse: GO:0043622 using "cortical microtubule cytoskeleton organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0005856, OBO_REL:unfolds_in=GO:0055028]) [-3] ! parse: GO:0043622 using "cortical microtubule cytoskeleton organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0030981]) [-2] ! parse: GO:0043622 using "cortical microtubule cytoskeleton organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=cdef(GO:0005856, [OBO_REL:part_of=GO:0055028])]) [-3] ! parse: GO:0043622 using "cortical microtubule organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0055028]) [-2] ! no existing xp def ! def: "A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of structures formed of microtubules and associated proteins in the cell cortex, i.e. just beneath the plasma membrane of a cell." ! PROPOSED: cellular component organization and biogenesis that OBO_REL:results_in_structural_change_to cortical microtubule [cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0055028])] [Term] id: GO:0043622 ! cortical microtubule organization and biogenesis intersection_of: GO:0016043 ! cellular component organization and biogenesis intersection_of: OBO_REL:results_in_structural_change_to GO:0055028 ! cortical microtubule synonym: "cortical microtubule organization" EXACT [OBOL:automatic] ! seconds spent parsing GO:0043622: 21.28 ! Already have xp for: GO:0043623 cellular protein complex assembly ! CURRENT : protein complex assembly that OBO_REL:part_of cellularization [cdef(GO:0006461, [OBO_REL:part_of=GO:0007349])] ! Already have xp for: GO:0043624 cellular protein complex disassembly ! CURRENT : protein complex disassembly that OBO_REL:part_of cellularization [cdef(GO:0043241, [OBO_REL:part_of=GO:0007349])] ! Already have xp for: GO:0043689 cell-cell adhesion during flocculation ! CURRENT : cell-cell adhesion that OBO_REL:part_of flocculation [cdef(GO:0016337, [OBO_REL:part_of=GO:0000128])] ! Already have xp for: GO:0043690 cell-cell adhesion during flocculation via cell wall protein-carbohydrate interaction ! CURRENT : cell-cell adhesion that OBO_REL:part_of flocculation via cell wall protein-carbohydrate interaction [cdef(GO:0016337, [OBO_REL:part_of=GO:0000501])] ! parse: GO:0043697 using "cell dedifferentiation" => cdef(GO:0043696, [OBO_REL:results_in_developmental_progression_of=CL:0000000]) [-2] ! parse: GO:0043697 using "cell dedifferentiation" => cdef(GO:0043696, [OBO_REL:results_in_developmental_progression_of=ZFA:0009000]) [-2] ! no existing xp def ! def: "The process whereby a specialized cell loses the structural or functional features that characterize it in the mature organism, or some other relatively stable phase of the organism's life history. Under certain conditions, these cells can revert back to the features of the stem cells that were their ancestors." ! PROPOSED: dedifferentiation that OBO_REL:results_in_developmental_progression_of cell [cdef(GO:0043696, [OBO_REL:results_in_developmental_progression_of=ZFA:0009000])] [Term] id: GO:0043697 ! cell dedifferentiation intersection_of: GO:0043696 ! dedifferentiation intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0009000 ! cell ! seconds spent parsing GO:0043697: 12.93 ! Already have xp for: GO:0043703 photoreceptor cell fate determination ! CURRENT : cell fate determination that OBO_REL:results_in_determination_to photoreceptor cell [cdef(GO:0001709, [OBO_REL:results_in_determination_to=CL:0000210])] ! Already have xp for: GO:0043704 photoreceptor cell fate specification ! CURRENT : cell fate specification that OBO_REL:results_in_specification_of photoreceptor cell [cdef(GO:0001708, [OBO_REL:results_in_specification_of=CL:0000210])] ! Already have xp for: GO:0043707 cell adhesion during single-species biofilm formation in or on host organism ! CURRENT : cell adhesion that OBO_REL:part_of single-species biofilm formation in or on host organism [cdef(GO:0007155, [OBO_REL:part_of=GO:0044407])] ! Already have xp for: GO:0043708 cell adhesion during biofilm formation ! CURRENT : cell adhesion that OBO_REL:part_of biofilm formation [cdef(GO:0007155, [OBO_REL:part_of=GO:0042710])] ! Already have xp for: GO:0043709 cell adhesion during single-species biofilm formation ! CURRENT : cell adhesion that OBO_REL:part_of single-species biofilm formation [cdef(GO:0007155, [OBO_REL:part_of=GO:0044010])] ! Already have xp for: GO:0043710 cell adhesion during multi-species biofilm formation ! CURRENT : cell adhesion that OBO_REL:part_of multi-species biofilm formation [cdef(GO:0007155, [OBO_REL:part_of=GO:0044399])] ! No parse for: GO:0043711 pilus organization and biogenesis ! No parse for: GO:0044236 multicellular organismal metabolic process ! Already have xp for: GO:0044237 cellular metabolic process ! CURRENT : metabolic process that OBO_REL:part_of cellularization [cdef(GO:0008152, [OBO_REL:part_of=GO:0007349])] ! No parse for: GO:0044239 salivary polysaccharide catabolic process ! No parse for: GO:0044240 multicellular organismal lipid catabolic process ! Already have xp for: GO:0044242 cellular lipid catabolic process ! CURRENT : lipid catabolic process that OBO_REL:part_of cellularization [cdef(GO:0016042, [OBO_REL:part_of=GO:0007349])] ! No parse for: GO:0044243 multicellular organismal catabolic process ! No parse for: GO:0044244 multicellular organismal polysaccharide catabolic process ! Already have xp for: GO:0044247 cellular polysaccharide catabolic process ! CURRENT : polysaccharide catabolic process that OBO_REL:part_of cellularization [cdef(GO:0000272, [OBO_REL:part_of=GO:0007349])] ! Already have xp for: GO:0044248 cellular catabolic process ! CURRENT : catabolic process that OBO_REL:part_of cellularization [cdef(GO:0009056, [OBO_REL:part_of=GO:0007349])] ! Already have xp for: GO:0044249 cellular biosynthetic process ! CURRENT : biosynthetic process that OBO_REL:part_of cellularization [cdef(GO:0009058, [OBO_REL:part_of=GO:0007349])] ! No parse for: GO:0044254 multicellular organismal protein catabolic process ! Already have xp for: GO:0044255 cellular lipid metabolic process ! CURRENT : lipid metabolic process that OBO_REL:part_of cellularization [cdef(GO:0006629, [OBO_REL:part_of=GO:0007349])] ! Already have xp for: GO:0044257 cellular protein catabolic process ! CURRENT : protein catabolic process that OBO_REL:part_of cellularization [cdef(GO:0030163, [OBO_REL:part_of=GO:0007349])] ! No parse for: GO:0044258 intestinal lipid catabolic process ! No parse for: GO:0044259 multicellular organismal macromolecule metabolic process ! Already have xp for: GO:0044260 cellular macromolecule metabolic process ! CURRENT : macromolecule metabolic process that OBO_REL:part_of cellularization [cdef(GO:0043170, [OBO_REL:part_of=GO:0007349])] ! No parse for: GO:0044261 multicellular organismal carbohydrate metabolic process ! Already have xp for: GO:0044262 cellular carbohydrate metabolic process ! CURRENT : carbohydrate metabolic process that OBO_REL:part_of cellularization [cdef(GO:0005975, [OBO_REL:part_of=GO:0007349])] ! No parse for: GO:0044263 multicellular organismal polysaccharide metabolic process ! Already have xp for: GO:0044264 cellular polysaccharide metabolic process ! CURRENT : polysaccharide metabolic process that OBO_REL:part_of cellularization [cdef(GO:0005976, [OBO_REL:part_of=GO:0007349])] ! Already have xp for: GO:0044265 cellular macromolecule catabolic process ! CURRENT : macromolecule catabolic process that OBO_REL:part_of cellularization [cdef(GO:0009057, [OBO_REL:part_of=GO:0007349])] ! No parse for: GO:0044266 multicellular organismal macromolecule catabolic process ! Already have xp for: GO:0044267 cellular protein metabolic process ! CURRENT : protein metabolic process that OBO_REL:part_of cellularization [cdef(GO:0019538, [OBO_REL:part_of=GO:0007349])] ! No parse for: GO:0044268 multicellular organismal protein metabolic process ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0044274 using "organismal formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(organismal, anatomy)]) [-11] ! no existing xp def ! def: "The chemical reactions and pathways resulting in the formation of substances in multicellular organisms, occurring at the tissue, organ, or organismal level." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of anon(organismal, anatomy) [cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(organismal, anatomy)])] [Term] id: GO:0044274 ! multicellular organismal biosynthetic process intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of anatomy:organismal synonym: "organismal anatomical structure formation" EXACT [OBOL:automatic] synonym: "organismal formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0044274: 21.32 ! Already have xp for: GO:0044275 cellular carbohydrate catabolic process ! CURRENT : carbohydrate catabolic process that OBO_REL:part_of cellularization [cdef(GO:0016052, [OBO_REL:part_of=GO:0007349])] ! No parse for: GO:0044276 multicellular organismal carbohydrate catabolic process ! No parse for: GO:0044403 symbiosis, encompassing mutualism through parasitism ! parse: GO:0044406 using "host adhesion" => cdef(GO:0022610, [OBO_REL:results_in_adhesion_to=GO:0018995]) [-2] ! no existing xp def ! def: "The attachment of an organism to its host via adhesion molecules, general stickiness etc., either directly or indirectly. The host is defined as the larger of the organisms involved in a symbiotic interaction." ! PROPOSED: biological adhesion that OBO_REL:results_in_adhesion_to host [cdef(GO:0022610, [OBO_REL:results_in_adhesion_to=GO:0018995])] [Term] id: GO:0044406 ! adhesion to host intersection_of: GO:0022610 ! biological adhesion intersection_of: OBO_REL:results_in_adhesion_to GO:0018995 ! host synonym: "host biological adhesion" EXACT [OBOL:automatic] synonym: "host organism adhesion" EXACT [OBOL:automatic] synonym: "host organism biological adhesion" EXACT [OBOL:automatic] ! seconds spent parsing GO:0044406: 10.4 ! No parse for: GO:0044409 entry into host ! No parse for: GO:0045010 actin nucleation ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0045011 using "actin cable assembly" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0030482]) [-2] ! parse: GO:0045011 using "actin cable formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=GO:0030482]) [-2] ! parse: GO:0045011 using "actin cable formation" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0030482]) [-2] ! parse: GO:0045011 using "actin cable formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0030482]) [-2] ! no existing xp def ! def: "The assembly of the long bundles of actin filaments known as actin cables." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of actin cable [cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0030482])] [Term] id: GO:0045011 ! actin cable formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of GO:0030482 ! actin cable synonym: "actin cable (sensu Fungi) anatomical structure formation" EXACT [OBOL:automatic] synonym: "actin cable (sensu Fungi) formation" EXACT [OBOL:automatic] synonym: "actin cable (sensu Fungi) formation of an anatomical structure" EXACT [OBOL:automatic] synonym: "actin cable (sensu Saccharomyces) anatomical structure formation" EXACT [OBOL:automatic] synonym: "actin cable (sensu Saccharomyces) formation" EXACT [OBOL:automatic] synonym: "actin cable (sensu Saccharomyces) formation of an anatomical structure" EXACT [OBOL:automatic] synonym: "actin cable anatomical structure formation" EXACT [OBOL:automatic] synonym: "actin cable formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0045011: 11.94 ! parse: GO:0045022 using "early endosome to late endosome transport" => cdef(GO:0006810, [OBO_REL:results_in_transport_from=GO:0005769, OBO_REL:results_in_transport_to=GO:0005770]) [-3] ! parse: GO:0045022 using "early endosome to late endosome transport" => cdef(GO:0006810, [and=results_in_transport_of(GO:0005770)/unfolds_in(FBbt:00002690), OBO_REL:unfolds_in=GO:0005769]) [-3] ! no existing xp def ! def: "The directed movement of substances, in membrane bound vesicles, from the early sorting endosomes to the late sorting endosomes; transport occurs along microtubules and can be experimentally blocked with microtubule-depolymerizing drugs." ! PROPOSED: transport that and results_in_transport_of(GO:0005770)/unfolds_in(FBbt:00002690) and OBO_REL:unfolds_in early endosome [cdef(GO:0006810, [and=results_in_transport_of(GO:0005770)/unfolds_in(FBbt:00002690), OBO_REL:unfolds_in=GO:0005769])] [Term] id: GO:0045022 ! early endosome to late endosome transport intersection_of: GO:0006810 ! transport intersection_of: and results_in_transport_of(GO:0005770)/unfolds_in(FBbt:00002690) intersection_of: OBO_REL:unfolds_in GO:0005769 ! early endosome ! seconds spent parsing GO:0045022: 17.64 ! No parse for: GO:0045026 plasma membrane fusion ! No parse for: GO:0045033 peroxisome inheritance ! Already have xp for: GO:0045034 neuroblast division ! CURRENT : cell division that OBO_REL:results_in_division_of neuroblast [cdef(GO:0051301, [OBO_REL:results_in_division_of=CL:0000031])] ! No parse for: GO:0045035 sensory organ precursor cell division ! parse: GO:0045037 using "chloroplast stroma protein import" => cdef(GO:0017038, [OBO_REL:results_in_transport_of=GO:0009570]) [-2] ! no existing xp def ! def: "The import of proteins into the chloroplast stroma. Import depends on ATP hydrolysis catalyzed by stromal chaperones. Chloroplast stromal proteins, such as the S subunit of rubisco, have a N-terminal stromal-import sequence of about 44 amino acids which is cleaved from the protein precursor after import." ! PROPOSED: protein import that OBO_REL:results_in_transport_of chloroplast stroma [cdef(GO:0017038, [OBO_REL:results_in_transport_of=GO:0009570])] [Term] id: GO:0045037 ! protein import into chloroplast stroma intersection_of: GO:0017038 ! protein import intersection_of: OBO_REL:results_in_transport_of GO:0009570 ! chloroplast stroma ! seconds spent parsing GO:0045037: 21.29 ! parse: GO:0045038 using "chloroplast thylakoid membrane protein import" => cdef(GO:0017038, [OBO_REL:results_in_transport_of=GO:0009535]) [-2] ! parse: GO:0045038 using "chloroplast thylakoid membrane protein import" => cdef(GO:0017038, [OBO_REL:results_in_transport_of=GO:0016020, OBO_REL:unfolds_in=GO:0009534]) [-3] ! parse: GO:0045038 using "chloroplast thylakoid membrane protein import" => cdef(GO:0017038, [OBO_REL:results_in_transport_of=GO:0016020, OBO_REL:unfolds_in=cdef(GO:0009579, [OBO_REL:part_of=GO:0009507])]) [-4] ! parse: GO:0045038 using "chloroplast thylakoid membrane protein import" => cdef(GO:0017038, [OBO_REL:results_in_transport_of=GO:0042651, OBO_REL:unfolds_in=GO:0009507]) [-3] ! parse: GO:0045038 using "chloroplast thylakoid membrane protein import" => cdef(GO:0017038, [OBO_REL:results_in_transport_of=cdef(GO:0016020, [OBO_REL:part_of=GO:0009534])]) [-3] ! parse: GO:0045038 using "chloroplast thylakoid membrane protein import" => cdef(GO:0017038, [OBO_REL:results_in_transport_of=cdef(GO:0016020, [OBO_REL:part_of=GO:0009579]), OBO_REL:unfolds_in=GO:0009507]) [-4] ! parse: GO:0045038 using "chloroplast thylakoid membrane protein import" => cdef(GO:0017038, [OBO_REL:results_in_transport_of=cdef(GO:0042651, [OBO_REL:part_of=GO:0009507])]) [-3] ! parse: GO:0045038 using "chloroplast thylakoid membrane protein import" => cdef(GO:0017038, [OBO_REL:results_in_transport_of=cdef(cdef(GO:0016020, [OBO_REL:part_of=GO:0009579]), [OBO_REL:part_of=GO:0009507])]) [-4] ! parse: GO:0045038 using "chloroplast thylakoid membrane protein import" => cdef(GO:0017038, [and=results_in_transport_of(GO:0016020)/unfolds_in(GO:0009579), OBO_REL:unfolds_in=GO:0009507]) [-3] ! no existing xp def ! def: "The import of proteins into the chloroplast thylakoid membranes. Proteins that are destined for the thylakoid lumen require two uptake-targeting sequences: the first targets the protein to the stroma, and the second targets the protein from the stroma to the thylakoid lumen. Four separate thylakoid-import systems deal with the proteins once they are in the stroma." ! PROPOSED: protein import that OBO_REL:results_in_transport_of chloroplast thylakoid membrane [cdef(GO:0017038, [OBO_REL:results_in_transport_of=GO:0009535])] [Term] id: GO:0045038 ! protein import into chloroplast thylakoid membrane intersection_of: GO:0017038 ! protein import intersection_of: OBO_REL:results_in_transport_of GO:0009535 ! chloroplast thylakoid membrane synonym: "thylakoid membrane (sensu Viridiplantae) protein import" EXACT [OBOL:automatic] synonym: "thylakoid membrane (sensu Viridiplantae) protein uptake" EXACT [OBOL:automatic] ! seconds spent parsing GO:0045038: 44.94 ! parse: GO:0045039 using "mitochondrial inner membrane protein import" => cdef(GO:0017038, [OBO_REL:results_in_transport_of=GO:0005743]) [-2] ! no existing xp def ! def: "The import of proteins into the mitochondria inner membrane. Inner membrane proteins are first imported into the matrix space where the matrix-targeting sequence is removed; how these proteins then are incorporated into the inner membrane is not known." ! PROPOSED: protein import that OBO_REL:results_in_transport_of mitochondrial inner membrane [cdef(GO:0017038, [OBO_REL:results_in_transport_of=GO:0005743])] [Term] id: GO:0045039 ! protein import into mitochondrial inner membrane intersection_of: GO:0017038 ! protein import intersection_of: OBO_REL:results_in_transport_of GO:0005743 ! mitochondrial inner membrane ! seconds spent parsing GO:0045039: 15.81 ! parse: GO:0045040 using "mitochondrial outer membrane protein import" => cdef(GO:0017038, [OBO_REL:results_in_transport_of=GO:0005741]) [-2] ! no existing xp def ! def: "The import of proteins into the outer membrane of the mitochondrion. Outer membrane proteins have a short matrix-targeting sequence followed by a long stretch of hydrophobic amino acids at the N-terminus. The hydrophobic sequence functions as a stop-transfer sequence that both prevents transfer of the protein into the matrix and anchors it as an integral protein in the outer membrane." ! PROPOSED: protein import that OBO_REL:results_in_transport_of mitochondrial outer membrane [cdef(GO:0017038, [OBO_REL:results_in_transport_of=GO:0005741])] [Term] id: GO:0045040 ! protein import into mitochondrial outer membrane intersection_of: GO:0017038 ! protein import intersection_of: OBO_REL:results_in_transport_of GO:0005741 ! mitochondrial outer membrane synonym: "metaxin protein import" EXACT [OBOL:automatic] synonym: "metaxin protein uptake" EXACT [OBOL:automatic] ! seconds spent parsing GO:0045040: 16.03 ! parse: GO:0045041 using "mitochondrial intermembrane space protein import" => cdef(GO:0017038, [OBO_REL:results_in_transport_of=GO:0005758]) [-2] ! no existing xp def ! def: "The import of proteins into the space between the inner and outer mitochondrial membranes." ! PROPOSED: protein import that OBO_REL:results_in_transport_of mitochondrial intermembrane space [cdef(GO:0017038, [OBO_REL:results_in_transport_of=GO:0005758])] [Term] id: GO:0045041 ! protein import into mitochondrial intermembrane space intersection_of: GO:0017038 ! protein import intersection_of: OBO_REL:results_in_transport_of GO:0005758 ! mitochondrial intermembrane space synonym: "mitochondrial envelope lumen protein import" EXACT [OBOL:automatic] synonym: "mitochondrial envelope lumen protein uptake" EXACT [OBOL:automatic] synonym: "mitochondrial membrane lumen protein import" EXACT [OBOL:automatic] synonym: "mitochondrial membrane lumen protein uptake" EXACT [OBOL:automatic] ! seconds spent parsing GO:0045041: 24.73 ! parse: GO:0045046 using "peroxisome membrane protein import" => cdef(GO:0017038, [OBO_REL:results_in_transport_of=GO:0016020, OBO_REL:unfolds_in=GO:0005777]) [-3] ! parse: GO:0045046 using "peroxisome membrane protein import" => cdef(GO:0017038, [OBO_REL:results_in_transport_of=cdef(GO:0016020, [OBO_REL:part_of=GO:0005777])]) [-3] ! no existing xp def ! def: "The targeting of proteins into the peroxisomal membrane. The process is not well understood, but both signals and mechanism differ from those involved in peroxisomal matrix protein import." ! PROPOSED: protein import that OBO_REL:results_in_transport_of cdef(GO:0016020, [OBO_REL:part_of=GO:0005777]) [cdef(GO:0017038, [OBO_REL:results_in_transport_of=cdef(GO:0016020, [OBO_REL:part_of=GO:0005777])])] [Term] id: GO:0045046 ! protein import into peroxisome membrane intersection_of: GO:0017038 ! protein import intersection_of: OBO_REL:results_in_transport_of peroxisomal_fatty_acyl_transporter_membrane synonym: "peroxisomal fatty acyl transporter membrane protein import" EXACT [OBOL:automatic] synonym: "peroxisomal fatty acyl transporter membrane protein uptake" EXACT [OBOL:automatic] synonym: "peroxisomal membrane transporter membrane protein import" EXACT [OBOL:automatic] synonym: "peroxisomal membrane transporter membrane protein uptake" EXACT [OBOL:automatic] synonym: "peroxisome receptor membrane protein import" EXACT [OBOL:automatic] synonym: "peroxisome receptor membrane protein uptake" EXACT [OBOL:automatic] ! seconds spent parsing GO:0045046: 17.56 ! Already have xp for: GO:0045058 T cell selection ! CURRENT : biological_process that OBO_REL:results_in_selection_of T cell [cdef(GO:0008150, [OBO_REL:results_in_selection_of=CL:0000084])] ! No parse for: GO:0045103 intermediate filament-based process ! parse: GO:0045104 using "intermediate filament cytoskeleton organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0005856, OBO_REL:unfolds_in=GO:0005882]) [-3] ! parse: GO:0045104 using "intermediate filament cytoskeleton organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0045111]) [-2] ! parse: GO:0045104 using "intermediate filament cytoskeleton organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=cdef(GO:0005856, [OBO_REL:part_of=GO:0005882])]) [-3] ! no existing xp def ! def: "A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising intermediate filaments and their associated proteins." ! PROPOSED: cellular component organization and biogenesis that OBO_REL:results_in_structural_change_to intermediate filament cytoskeleton [cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0045111])] [Term] id: GO:0045104 ! intermediate filament cytoskeleton organization and biogenesis intersection_of: GO:0016043 ! cellular component organization and biogenesis intersection_of: OBO_REL:results_in_structural_change_to GO:0045111 ! intermediate filament cytoskeleton synonym: "intermediate filament cytoskeleton organization" EXACT [OBOL:automatic] ! seconds spent parsing GO:0045104: 19.41 ! No parse for: GO:0045105 intermediate filament polymerization and/or depolymerization ! No parse for: GO:0045106 intermediate filament depolymerization ! No parse for: GO:0045107 intermediate filament polymerization ! parse: GO:0045109 using "intermediate filament organization" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0005882]) [-2] ! no existing xp def ! def: "Control of the spatial distribution of intermediate filaments; includes organizing filaments into meshworks, bundles, or other structures, as by cross-linking." ! PROPOSED: cellular component organization and biogenesis that OBO_REL:results_in_structural_change_to intermediate filament [cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0005882])] [Term] id: GO:0045109 ! intermediate filament organization intersection_of: GO:0016043 ! cellular component organization and biogenesis intersection_of: OBO_REL:results_in_structural_change_to GO:0005882 ! intermediate filament synonym: "intermediate filament associated protein organization" EXACT [OBOL:automatic] synonym: "intermediate filament associated protein organization and biogenesis" EXACT [OBOL:automatic] synonym: "intermediate filament organization and biogenesis" EXACT [OBOL:automatic] synonym: "type I intermediate filament associated protein organization" EXACT [OBOL:automatic] synonym: "type I intermediate filament associated protein organization and biogenesis" EXACT [OBOL:automatic] synonym: "type II intermediate filament associated protein organization" EXACT [OBOL:automatic] synonym: "type II intermediate filament associated protein organization and biogenesis" EXACT [OBOL:automatic] ! seconds spent parsing GO:0045109: 11.28 ! No parse for: GO:0045110 intermediate filament bundle assembly ! No parse for: GO:0045123 cellular extravasation ! Already have xp for: GO:0045132 meiotic chromosome segregation ! CURRENT : chromosome segregation that OBO_REL:part_of meiosis [cdef(GO:0007059, [OBO_REL:part_of=GO:0007126])] ! No parse for: GO:0045138 tail tip morphogenesis (sensu Nematoda) ! No parse for: GO:0045141 telomere clustering ! No parse for: GO:0045161 neuronal ion channel clustering ! No parse for: GO:0045165 cell fate commitment ! Already have xp for: GO:0045167 asymmetric protein localization during cell fate commitment ! CURRENT : asymmetric protein localization that OBO_REL:part_of cell fate commitment [cdef(GO:0008105, [OBO_REL:part_of=GO:0045165])] ! Already have xp for: GO:0045168 cell-cell signaling during cell fate commitment ! CURRENT : cell-cell signaling that OBO_REL:part_of cell fate commitment [cdef(GO:0007267, [OBO_REL:part_of=GO:0045165])] ! parse: GO:0045186 using "zonula adherens assembly" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0005915]) [-2] ! no existing xp def ! def: "Assembly of the zonula adherens, a cell-cell adherens junction which forms a continuous belt near the apex of epithelial cells." ! PROPOSED: cellular component assembly that OBO_REL:results_in_creation_of zonula adherens [cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0005915])] [Term] id: GO:0045186 ! zonula adherens assembly intersection_of: GO:0022607 ! cellular component assembly intersection_of: OBO_REL:results_in_creation_of GO:0005915 ! zonula adherens synonym: "assembly and maintenance of belt desmosome" EXACT [OBOL:automatic] synonym: "assembly and maintenance of intermediate junction" EXACT [OBOL:automatic] synonym: "assembly and maintenance of zonula adherens" EXACT [OBOL:automatic] synonym: "assembly of belt desmosome" EXACT [OBOL:automatic] synonym: "assembly of intermediate junction" EXACT [OBOL:automatic] synonym: "assembly of zonula adherens" EXACT [OBOL:automatic] synonym: "belt desmosome assembly" EXACT [OBOL:automatic] synonym: "belt desmosome assembly and maintenance" EXACT [OBOL:automatic] synonym: "belt desmosome biogenesis" EXACT [OBOL:automatic] synonym: "belt desmosome biogenesis and assembly" EXACT [OBOL:automatic] synonym: "belt desmosome cell structure assembly" EXACT [OBOL:automatic] synonym: "belt desmosome cellular component assembly" EXACT [OBOL:automatic] synonym: "belt desmosome complex assembly" EXACT [OBOL:automatic] synonym: "belt desmosome formation" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of belt desmosome" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of intermediate junction" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of zonula adherens" EXACT [OBOL:automatic] synonym: "biogenesis of belt desmosome" EXACT [OBOL:automatic] synonym: "biogenesis of intermediate junction" EXACT [OBOL:automatic] synonym: "biogenesis of zonula adherens" EXACT [OBOL:automatic] synonym: "cell structure assembly of belt desmosome" EXACT [OBOL:automatic] synonym: "cell structure assembly of intermediate junction" EXACT [OBOL:automatic] synonym: "cell structure assembly of zonula adherens" EXACT [OBOL:automatic] synonym: "cellular component assembly of belt desmosome" EXACT [OBOL:automatic] synonym: "cellular component assembly of intermediate junction" EXACT [OBOL:automatic] synonym: "cellular component assembly of zonula adherens" EXACT [OBOL:automatic] synonym: "complex assembly of belt desmosome" EXACT [OBOL:automatic] synonym: "complex assembly of intermediate junction" EXACT [OBOL:automatic] synonym: "complex assembly of zonula adherens" EXACT [OBOL:automatic] synonym: "formation of belt desmosome" EXACT [OBOL:automatic] synonym: "formation of intermediate junction" EXACT [OBOL:automatic] synonym: "formation of zonula adherens" EXACT [OBOL:automatic] synonym: "intermediate junction assembly" EXACT [OBOL:automatic] synonym: "intermediate junction assembly and maintenance" EXACT [OBOL:automatic] synonym: "intermediate junction biogenesis" EXACT [OBOL:automatic] synonym: "intermediate junction biogenesis and assembly" EXACT [OBOL:automatic] synonym: "intermediate junction cell structure assembly" EXACT [OBOL:automatic] synonym: "intermediate junction cellular component assembly" EXACT [OBOL:automatic] synonym: "intermediate junction complex assembly" EXACT [OBOL:automatic] synonym: "intermediate junction formation" EXACT [OBOL:automatic] synonym: "zonula adherens assembly and maintenance" EXACT [OBOL:automatic] synonym: "zonula adherens biogenesis" EXACT [OBOL:automatic] synonym: "zonula adherens biogenesis and assembly" EXACT [OBOL:automatic] synonym: "zonula adherens cell structure assembly" EXACT [OBOL:automatic] synonym: "zonula adherens cellular component assembly" EXACT [OBOL:automatic] synonym: "zonula adherens complex assembly" EXACT [OBOL:automatic] synonym: "zonula adherens formation" EXACT [OBOL:automatic] def: "The aggregation and bonding together of a set of macromolecules to form a belt desmosome" [OBOL:automatic] ! seconds spent parsing GO:0045186: 5.72 ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0045189 using "connective tissue growth factor formation" => cdef(GO:0048646, [and=OBO_REL:results_in_formation_of(anon(growth factor, anatomy))/unfolds_in(PO:0009007), OBO_REL:unfolds_in=FBbt:00005104]) [-3] ! parse: GO:0045189 using "connective tissue growth factor formation" => cdef(GO:0048646, [and=OBO_REL:results_in_formation_of(anon(growth factor, anatomy))/unfolds_in(PO:0009007), OBO_REL:unfolds_in=PO:0009068]) [-3] ! parse: GO:0045189 using "connective tissue growth factor formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(growth factor, anatomy), OBO_REL:unfolds_in=MA:0000011]) [-15] ! parse: GO:0045189 using "connective tissue growth factor formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(growth factor, anatomy), OBO_REL:unfolds_in=cdef(PO:0009007, [OBO_REL:part_of=FBbt:00005104])]) [-16] ! parse: GO:0045189 using "connective tissue growth factor formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(growth factor, anatomy), OBO_REL:unfolds_in=cdef(PO:0009007, [OBO_REL:part_of=PO:0009068])]) [-16] ! no existing xp def ! def: "The chemical reactions and pathways resulting in the formation of CTGF, produced by human umbilical vein endothelial cells and by skin fibroblasts after activation with TGFbeta." ! PROPOSED: anatomical structure formation that and OBO_REL:results_in_formation_of(anon(growth factor, anatomy))/unfolds_in(PO:0009007) and OBO_REL:unfolds_in connective [cdef(GO:0048646, [and=OBO_REL:results_in_formation_of(anon(growth factor, anatomy))/unfolds_in(PO:0009007), OBO_REL:unfolds_in=PO:0009068])] [Term] id: GO:0045189 ! connective tissue growth factor biosynthetic process intersection_of: GO:0048646 ! anatomical structure formation intersection_of: and OBO_REL:results_in_formation_of(anon(growth factor, anatomy))/unfolds_in(PO:0009007) intersection_of: OBO_REL:unfolds_in PO:0009068 ! connective ! seconds spent parsing GO:0045189: 95.68 ! No parse for: GO:0045192 low-density lipoprotein catabolic process ! No parse for: GO:0045204 MAPK export from nucleus ! No parse for: GO:0045208 MAPK phosphatase export from nucleus ! No parse for: GO:0045209 MAPK phosphatase export from nucleus, leptomycin B sensitive ! parse: GO:0045214 using "sarcomere organization" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0030017]) [-2] ! no existing xp def ! def: "The organization of the muscle actomyosin into sarcomeres. The sarcomere is the repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs." ! PROPOSED: cellular component organization and biogenesis that OBO_REL:results_in_structural_change_to sarcomere [cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0030017])] [Term] id: GO:0045214 ! sarcomere organization intersection_of: GO:0016043 ! cellular component organization and biogenesis intersection_of: OBO_REL:results_in_structural_change_to GO:0030017 ! sarcomere synonym: "sarcomere organization and biogenesis" EXACT [OBOL:automatic] ! seconds spent parsing GO:0045214: 20.74 ! parse: GO:0045216 using "intercellular junction assembly and maintenance" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0005911]) [-2] ! no existing xp def ! def: "The assembly and maintenance of junctions between cells." ! PROPOSED: cellular component assembly that OBO_REL:results_in_creation_of intercellular junction [cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0005911])] [Term] id: GO:0045216 ! intercellular junction assembly and maintenance intersection_of: GO:0022607 ! cellular component assembly intersection_of: OBO_REL:results_in_creation_of GO:0005911 ! intercellular junction synonym: "assembly and maintenance of cell-cell junction" EXACT [OBOL:automatic] synonym: "assembly and maintenance of intercellular junction" EXACT [OBOL:automatic] synonym: "assembly of cell-cell junction" EXACT [OBOL:automatic] synonym: "assembly of intercellular junction" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of cell-cell junction" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of intercellular junction" EXACT [OBOL:automatic] synonym: "biogenesis of cell-cell junction" EXACT [OBOL:automatic] synonym: "biogenesis of intercellular junction" EXACT [OBOL:automatic] synonym: "cell structure assembly of cell-cell junction" EXACT [OBOL:automatic] synonym: "cell structure assembly of intercellular junction" EXACT [OBOL:automatic] synonym: "cell-cell junction assembly" EXACT [OBOL:automatic] synonym: "cell-cell junction assembly and maintenance" EXACT [OBOL:automatic] synonym: "cell-cell junction biogenesis" EXACT [OBOL:automatic] synonym: "cell-cell junction biogenesis and assembly" EXACT [OBOL:automatic] synonym: "cell-cell junction cell structure assembly" EXACT [OBOL:automatic] synonym: "cell-cell junction cellular component assembly" EXACT [OBOL:automatic] synonym: "cell-cell junction complex assembly" EXACT [OBOL:automatic] synonym: "cell-cell junction formation" EXACT [OBOL:automatic] synonym: "cellular component assembly of cell-cell junction" EXACT [OBOL:automatic] synonym: "cellular component assembly of intercellular junction" EXACT [OBOL:automatic] synonym: "complex assembly of cell-cell junction" EXACT [OBOL:automatic] synonym: "complex assembly of intercellular junction" EXACT [OBOL:automatic] synonym: "formation of cell-cell junction" EXACT [OBOL:automatic] synonym: "formation of intercellular junction" EXACT [OBOL:automatic] synonym: "intercellular junction assembly" EXACT [OBOL:automatic] synonym: "intercellular junction biogenesis" EXACT [OBOL:automatic] synonym: "intercellular junction biogenesis and assembly" EXACT [OBOL:automatic] synonym: "intercellular junction cell structure assembly" EXACT [OBOL:automatic] synonym: "intercellular junction cellular component assembly" EXACT [OBOL:automatic] synonym: "intercellular junction complex assembly" EXACT [OBOL:automatic] synonym: "intercellular junction formation" EXACT [OBOL:automatic] def: "The aggregation and bonding together of a set of macromolecules to form a cell-cell junction" [OBOL:automatic] ! seconds spent parsing GO:0045216: 6.14 ! No parse for: GO:0045217 intercellular junction maintenance ! No parse for: GO:0045218 zonula adherens maintenance ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0045226 using "extracellular polysaccharide anabolism" => cdef(GO:0000271, [OBO_REL:results_in_creation_of=GO:0005576]) [-2] ! parse: GO:0045226 using "extracellular polysaccharide biosynthesis" => cdef(GO:0000271, [OBO_REL:results_in_creation_of=GO:0005576]) [-2] ! parse: GO:0045226 using "extracellular polysaccharide biosynthetic process" => cdef(GO:0000271, [OBO_REL:results_in_creation_of=GO:0005576]) [-2] ! parse: GO:0045226 using "extracellular polysaccharide formation" => cdef(GO:0000271, [OBO_REL:results_in_creation_of=GO:0005576]) [-2] ! parse: GO:0045226 using "extracellular polysaccharide formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(polysaccharide, anatomy), OBO_REL:unfolds_in=GO:0005576]) [-16] ! parse: GO:0045226 using "extracellular polysaccharide synthesis" => cdef(GO:0000271, [OBO_REL:results_in_creation_of=GO:0005576]) [-2] ! no existing xp def ! def: "The chemical reactions and pathways resulting in the formation of polysaccharides used in extracellular structures." ! PROPOSED: polysaccharide biosynthetic process that OBO_REL:results_in_creation_of extracellular region [cdef(GO:0000271, [OBO_REL:results_in_creation_of=GO:0005576])] [Term] id: GO:0045226 ! extracellular polysaccharide biosynthetic process intersection_of: GO:0000271 ! polysaccharide biosynthetic process intersection_of: OBO_REL:results_in_creation_of GO:0005576 ! extracellular region synonym: "extracellular region glycan biosynthesis" EXACT [OBOL:automatic] synonym: "extracellular region glycan biosynthetic process" EXACT [OBOL:automatic] synonym: "extracellular region polysaccharide anabolism" EXACT [OBOL:automatic] synonym: "extracellular region polysaccharide biosynthesis" EXACT [OBOL:automatic] synonym: "extracellular region polysaccharide biosynthetic process" EXACT [OBOL:automatic] synonym: "extracellular region polysaccharide formation" EXACT [OBOL:automatic] synonym: "extracellular region polysaccharide synthesis" EXACT [OBOL:automatic] def: "The aggregation and bonding together of a set of macromolecules to form a extracellular" [OBOL:automatic] ! seconds spent parsing GO:0045226: 52.76 ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0045227 using "capsule polysaccharide anabolism" => cdef(GO:0000271, [OBO_REL:results_in_creation_of=GO:0042603]) [-2] ! parse: GO:0045227 using "capsule polysaccharide biosynthesis" => cdef(GO:0000271, [OBO_REL:results_in_creation_of=GO:0042603]) [-2] ! parse: GO:0045227 using "capsule polysaccharide biosynthetic process" => cdef(GO:0000271, [OBO_REL:results_in_creation_of=GO:0042603]) [-2] ! parse: GO:0045227 using "capsule polysaccharide formation" => cdef(GO:0000271, [OBO_REL:results_in_creation_of=GO:0042603]) [-2] ! parse: GO:0045227 using "capsule polysaccharide formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(polysaccharide, anatomy), OBO_REL:unfolds_in=GO:0042603]) [-16] ! parse: GO:0045227 using "capsule polysaccharide synthesis" => cdef(GO:0000271, [OBO_REL:results_in_creation_of=GO:0042603]) [-2] ! no existing xp def ! def: "The chemical reactions and pathways resulting in the formation of polysaccharides that make up the capsule, a protective structure surrounding some species of bacteria and fungi." ! PROPOSED: polysaccharide biosynthetic process that OBO_REL:results_in_creation_of capsule [cdef(GO:0000271, [OBO_REL:results_in_creation_of=GO:0042603])] [Term] id: GO:0045227 ! capsule polysaccharide biosynthetic process intersection_of: GO:0000271 ! polysaccharide biosynthetic process intersection_of: OBO_REL:results_in_creation_of GO:0042603 ! capsule synonym: "capsule (sensu Bacteria) glycan biosynthesis" EXACT [OBOL:automatic] synonym: "capsule (sensu Bacteria) glycan biosynthetic process" EXACT [OBOL:automatic] synonym: "capsule (sensu Bacteria) polysaccharide anabolism" EXACT [OBOL:automatic] synonym: "capsule (sensu Bacteria) polysaccharide biosynthesis" EXACT [OBOL:automatic] synonym: "capsule (sensu Bacteria) polysaccharide biosynthetic process" EXACT [OBOL:automatic] synonym: "capsule (sensu Bacteria) polysaccharide formation" EXACT [OBOL:automatic] synonym: "capsule (sensu Bacteria) polysaccharide synthesis" EXACT [OBOL:automatic] synonym: "capsule (sensu Fungi) glycan biosynthesis" EXACT [OBOL:automatic] synonym: "capsule (sensu Fungi) glycan biosynthetic process" EXACT [OBOL:automatic] synonym: "capsule (sensu Fungi) polysaccharide anabolism" EXACT [OBOL:automatic] synonym: "capsule (sensu Fungi) polysaccharide biosynthesis" EXACT [OBOL:automatic] synonym: "capsule (sensu Fungi) polysaccharide biosynthetic process" EXACT [OBOL:automatic] synonym: "capsule (sensu Fungi) polysaccharide formation" EXACT [OBOL:automatic] synonym: "capsule (sensu Fungi) polysaccharide synthesis" EXACT [OBOL:automatic] def: "The aggregation and bonding together of a set of macromolecules to form a capsule" [OBOL:automatic] ! seconds spent parsing GO:0045227: 40.14 ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0045228 using "slime layer polysaccharide anabolism" => cdef(GO:0000271, [OBO_REL:results_in_creation_of=GO:0030114]) [-2] ! parse: GO:0045228 using "slime layer polysaccharide biosynthesis" => cdef(GO:0000271, [OBO_REL:results_in_creation_of=GO:0030114]) [-2] ! parse: GO:0045228 using "slime layer polysaccharide biosynthetic process" => cdef(GO:0000271, [OBO_REL:results_in_creation_of=GO:0030114]) [-2] ! parse: GO:0045228 using "slime layer polysaccharide formation" => cdef(GO:0000271, [OBO_REL:results_in_creation_of=GO:0030114]) [-2] ! parse: GO:0045228 using "slime layer polysaccharide formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(polysaccharide, anatomy), OBO_REL:unfolds_in=GO:0030114]) [-16] ! parse: GO:0045228 using "slime layer polysaccharide synthesis" => cdef(GO:0000271, [OBO_REL:results_in_creation_of=GO:0030114]) [-2] ! no existing xp def ! def: "The chemical reactions and pathways resulting in the formation of polysaccharides in the slime layer, a diffused layer of polysaccharide exterior to the bacterial cell wall." ! PROPOSED: polysaccharide biosynthetic process that OBO_REL:results_in_creation_of slime layer [cdef(GO:0000271, [OBO_REL:results_in_creation_of=GO:0030114])] [Term] id: GO:0045228 ! slime layer polysaccharide biosynthetic process intersection_of: GO:0000271 ! polysaccharide biosynthetic process intersection_of: OBO_REL:results_in_creation_of GO:0030114 ! slime layer def: "The aggregation and bonding together of a set of macromolecules to form a slime layer" [OBOL:automatic] ! seconds spent parsing GO:0045228: 31.26 ! parse: GO:0045229 using "external encapsulating structure organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0030312]) [-2] ! no existing xp def ! def: "A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of external structures that lie outside the plasma membrane and surround the entire cell." ! PROPOSED: cellular component organization and biogenesis that OBO_REL:results_in_structural_change_to external encapsulating structure [cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0030312])] [Term] id: GO:0045229 ! external encapsulating structure organization and biogenesis intersection_of: GO:0016043 ! cellular component organization and biogenesis intersection_of: OBO_REL:results_in_structural_change_to GO:0030312 ! external encapsulating structure synonym: "external encapsulating structure organization" EXACT [OBOL:automatic] ! seconds spent parsing GO:0045229: 11.32 ! parse: GO:0045230 using "capsule organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0042603]) [-2] ! no existing xp def ! def: "A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the capsule, a protective structure surrounding some species of bacteria and fungi." ! PROPOSED: cellular component organization and biogenesis that OBO_REL:results_in_structural_change_to capsule [cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0042603])] [Term] id: GO:0045230 ! capsule organization and biogenesis intersection_of: GO:0016043 ! cellular component organization and biogenesis intersection_of: OBO_REL:results_in_structural_change_to GO:0042603 ! capsule synonym: "capsule (sensu Bacteria) organization" EXACT [OBOL:automatic] synonym: "capsule (sensu Bacteria) organization and biogenesis" EXACT [OBOL:automatic] synonym: "capsule (sensu Fungi) organization" EXACT [OBOL:automatic] synonym: "capsule (sensu Fungi) organization and biogenesis" EXACT [OBOL:automatic] synonym: "capsule organization" EXACT [OBOL:automatic] ! seconds spent parsing GO:0045230: 11.27 ! parse: GO:0045231 using "slime layer organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0030114]) [-2] ! no existing xp def ! def: "A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a slime layer enveloping the cell." ! PROPOSED: cellular component organization and biogenesis that OBO_REL:results_in_structural_change_to slime layer [cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0030114])] [Term] id: GO:0045231 ! slime layer organization and biogenesis intersection_of: GO:0016043 ! cellular component organization and biogenesis intersection_of: OBO_REL:results_in_structural_change_to GO:0030114 ! slime layer synonym: "slime layer organization" EXACT [OBOL:automatic] ! seconds spent parsing GO:0045231: 11.31 ! parse: GO:0045232 using "S-layer organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0030115]) [-2] ! no existing xp def ! def: "A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an S-layer enveloping the cell." ! PROPOSED: cellular component organization and biogenesis that OBO_REL:results_in_structural_change_to S-layer [cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0030115])] [Term] id: GO:0045232 ! S-layer organization and biogenesis intersection_of: GO:0016043 ! cellular component organization and biogenesis intersection_of: OBO_REL:results_in_structural_change_to GO:0030115 ! S-layer synonym: "S-layer organization" EXACT [OBOL:automatic] ! seconds spent parsing GO:0045232: 11.33 ! No parse for: GO:0045311 filamentous growth in response to pheromones ! parse: GO:0045313 using "rhabdomere membrane biogenesis" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0016020, OBO_REL:unfolds_in=FBbt:00004212]) [-3] ! parse: GO:0045313 using "rhabdomere membrane biogenesis" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0016020, OBO_REL:unfolds_in=GO:0016028]) [-3] ! parse: GO:0045313 using "rhabdomere membrane biogenesis" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=cdef(GO:0016020, [OBO_REL:part_of=GO:0016028])]) [-3] ! no existing xp def ! def: "The assembly and maintenance of the rhabdomere membrane." ! PROPOSED: cellular component assembly that OBO_REL:results_in_creation_of cdef(GO:0016020, [OBO_REL:part_of=GO:0016028]) [cdef(GO:0022607, [OBO_REL:results_in_creation_of=cdef(GO:0016020, [OBO_REL:part_of=GO:0016028])])] [Term] id: GO:0045313 ! rhabdomere membrane biogenesis intersection_of: GO:0022607 ! cellular component assembly intersection_of: OBO_REL:results_in_creation_of rhabdomere_membrane synonym: "assembly and maintenance of rhabdomere membrane" EXACT [OBOL:automatic] synonym: "assembly of rhabdomere membrane" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of rhabdomere membrane" EXACT [OBOL:automatic] synonym: "biogenesis of rhabdomere membrane" EXACT [OBOL:automatic] synonym: "cell structure assembly of rhabdomere membrane" EXACT [OBOL:automatic] synonym: "cellular component assembly of rhabdomere membrane" EXACT [OBOL:automatic] synonym: "complex assembly of rhabdomere membrane" EXACT [OBOL:automatic] synonym: "formation of rhabdomere membrane" EXACT [OBOL:automatic] synonym: "rhabdomere membrane assembly" EXACT [OBOL:automatic] synonym: "rhabdomere membrane assembly and maintenance" EXACT [OBOL:automatic] synonym: "rhabdomere membrane biogenesis and assembly" EXACT [OBOL:automatic] synonym: "rhabdomere membrane cell structure assembly" EXACT [OBOL:automatic] synonym: "rhabdomere membrane cellular component assembly" EXACT [OBOL:automatic] synonym: "rhabdomere membrane complex assembly" EXACT [OBOL:automatic] synonym: "rhabdomere membrane formation" EXACT [OBOL:automatic] def: "The aggregation and bonding together of a set of macromolecules to form a rhabdomere membrane" [OBOL:automatic] ! seconds spent parsing GO:0045313: 8.68 ! Already have xp for: GO:0045321 leukocyte activation ! CURRENT : cell activation that OBO_REL:results_in_change_to leukocyte [cdef(GO:0001775, [OBO_REL:results_in_change_to=CL:0000738])] ! parse: GO:0045324 using "late endosome to vacuole transport" => cdef(GO:0006810, [OBO_REL:results_in_transport_from=GO:0005770, OBO_REL:results_in_transport_to=GO:0005773]) [-3] ! parse: GO:0045324 using "late endosome to vacuole transport" => cdef(GO:0006810, [and=results_in_transport_of(GO:0005773)/unfolds_in(FBbt:00002690), OBO_REL:unfolds_in=GO:0005770]) [-3] ! no existing xp def ! def: "The directed movement of substances from late endosomes to the vacuole. In yeast, after transport to the prevacuolar compartment, endocytic content is delivered to the late endosome and on to the vacuole. This pathway is analogous to endosome to lysosome transport." ! PROPOSED: transport that and results_in_transport_of(GO:0005773)/unfolds_in(FBbt:00002690) and OBO_REL:unfolds_in late endosome [cdef(GO:0006810, [and=results_in_transport_of(GO:0005773)/unfolds_in(FBbt:00002690), OBO_REL:unfolds_in=GO:0005770])] [Term] id: GO:0045324 ! late endosome to vacuole transport intersection_of: GO:0006810 ! transport intersection_of: and results_in_transport_of(GO:0005773)/unfolds_in(FBbt:00002690) intersection_of: OBO_REL:unfolds_in GO:0005770 ! late endosome ! seconds spent parsing GO:0045324: 6.35 ! No parse for: GO:0045328 cytochrome P450 4A1-heme linkage ! No parse for: GO:0045333 cellular respiration ! No parse for: GO:0045427 enzyme active site formation via (phospho-5'-guanosine)-L-histidine ! Already have xp for: GO:0045444 fat cell differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of fat cell [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000136])] ! Already have xp for: GO:0045445 myoblast differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of myoblast [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000056])] ! Already have xp for: GO:0045446 endothelial cell differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of endothelial cell [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000115])] ! Already have xp for: GO:0045451 pole plasm oskar mRNA localization ! CURRENT : localization that OBO_REL:results_in_localization_of pole plasm oskar mRNA [cdef(GO:0051179, [OBO_REL:results_in_localization_of=cell:pole_plasm_oskar_mRNA])] ! No parse for: GO:0045453 bone resorption ! No parse for: GO:0045454 cell redox homeostasis ! Already have xp for: GO:0045476 nurse cell apoptosis ! CURRENT : apoptosis that OBO_REL:results_in_death_of nurse cell [cdef(GO:0006915, [OBO_REL:results_in_death_of=CL:0000026])] ! parse: GO:0045478 using "fusome organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0045169]) [-2] ! no existing xp def ! def: "A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the fusome, a large intracellular spectrin-rich structure found in insect germline cells and mammalian hematopoietic cells." ! PROPOSED: cellular component organization and biogenesis that OBO_REL:results_in_structural_change_to fusome [cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0045169])] [Term] id: GO:0045478 ! fusome organization and biogenesis intersection_of: GO:0016043 ! cellular component organization and biogenesis intersection_of: OBO_REL:results_in_structural_change_to GO:0045169 ! fusome synonym: "fusome organization" EXACT [OBOL:automatic] ! seconds spent parsing GO:0045478: 12.52 ! No parse for: GO:0045479 vesicle targeting to fusome ! No parse for: GO:0045494 photoreceptor cell maintenance ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0045496 using "male analia development" => cdef(GO:0007487, [OBO_REL:results_in_developmental_progression_of=cell:male]) [-2] ! parse: GO:0045496 using "male analia development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=FBbt:00004823, OBO_REL:unfolds_in=cell:male]) [-3] ! parse: GO:0045496 using "male analia development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00004823, OBO_REL:unfolds_in=cell:male]) [-3] ! parse: GO:0045496 using "male analia development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00004825]) [-2] ! parse: GO:0045496 using "male analia development (sensu Endopterygota)" => cdef(GO:0007487, [OBO_REL:results_in_developmental_progression_of=cell:male]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the analia of the male over time, from formation to the mature structure. The analia is the posterior-most vertral appendage that develops from the genital disc. As in, but not restricted to, the Holometabola (Endopterygota, ncbi_taxonomy_id:33392)." ! PROPOSED: developmental process that results_in_complete_developmental_of male analia [cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00004825])] [Term] id: GO:0045496 ! male analia development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of FBbt:00004825 ! male analia ! seconds spent parsing GO:0045496: 15.82 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0045497 using "female analia development" => cdef(GO:0007487, [OBO_REL:results_in_developmental_progression_of=cell:female]) [-2] ! parse: GO:0045497 using "female analia development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=FBbt:00004823, OBO_REL:unfolds_in=cell:female]) [-3] ! parse: GO:0045497 using "female analia development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00004823, OBO_REL:unfolds_in=cell:female]) [-3] ! parse: GO:0045497 using "female analia development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00004824]) [-2] ! parse: GO:0045497 using "female analia development (sensu Endopterygota)" => cdef(GO:0007487, [OBO_REL:results_in_developmental_progression_of=cell:female]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the analia of the female over time, from formation to the mature structure. The analia is the posterior-most vertral appendage that develops from the genital disc. As in, but not restricted to, the Holometabola (Endopterygota, ncbi_taxonomy_id:33392)." ! PROPOSED: developmental process that results_in_complete_developmental_of female analia [cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00004824])] [Term] id: GO:0045497 ! female analia development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of FBbt:00004824 ! female analia ! seconds spent parsing GO:0045497: 15.77 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0045498 using "sex comb development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00004296]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the sex comb over time, from its formation to the mature structure. The sex combs are the male specific chaetae located on the prothoracic tarsal segment of the prothoracic leg." ! PROPOSED: developmental process that results_in_complete_developmental_of sex comb [cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00004296])] [Term] id: GO:0045498 ! sex comb development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of FBbt:00004296 ! sex comb synonym: "metatarsal comb development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0045498: 4.78 ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0045524 using "interleukin-24 formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(interleukin-2 4, anatomy)]) [-16] ! no existing xp def ! def: "The chemical reactions and pathways resulting in the formation of interleukin-24." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of anon(interleukin-2 4, anatomy) [cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(interleukin-2 4, anatomy)])] [Term] id: GO:0045524 ! interleukin-24 biosynthetic process intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of anatomy:interleukin_-_2_4 synonym: "interleukin-2 4 anatomical structure formation" EXACT [OBOL:automatic] synonym: "interleukin-2 4 formation" EXACT [OBOL:automatic] synonym: "interleukin-2 4 formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0045524: 30.73 ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0045525 using "interleukin-25 formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(interleukin-2 5, anatomy)]) [-16] ! no existing xp def ! def: "The chemical reactions and pathways resulting in the formation of interleukin-25." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of anon(interleukin-2 5, anatomy) [cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(interleukin-2 5, anatomy)])] [Term] id: GO:0045525 ! interleukin-25 biosynthetic process intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of anatomy:interleukin_-_2_5 synonym: "interleukin-2 5 anatomical structure formation" EXACT [OBOL:automatic] synonym: "interleukin-2 5 formation" EXACT [OBOL:automatic] synonym: "interleukin-2 5 formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0045525: 30.74 ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0045526 using "interleukin-26 formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(interleukin-2 6, anatomy)]) [-16] ! no existing xp def ! def: "The chemical reactions and pathways resulting in the formation of interleukin-26." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of anon(interleukin-2 6, anatomy) [cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(interleukin-2 6, anatomy)])] [Term] id: GO:0045526 ! interleukin-26 biosynthetic process intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of anatomy:interleukin_-_2_6 synonym: "interleukin-2 6 anatomical structure formation" EXACT [OBOL:automatic] synonym: "interleukin-2 6 formation" EXACT [OBOL:automatic] synonym: "interleukin-2 6 formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0045526: 30.77 ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0045527 using "interleukin-27 formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(interleukin-2 7, anatomy)]) [-16] ! no existing xp def ! def: "The chemical reactions and pathways resulting in the formation of interleukin-27." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of anon(interleukin-2 7, anatomy) [cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(interleukin-2 7, anatomy)])] [Term] id: GO:0045527 ! interleukin-27 biosynthetic process intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of anatomy:interleukin_-_2_7 synonym: "interleukin-2 7 anatomical structure formation" EXACT [OBOL:automatic] synonym: "interleukin-2 7 formation" EXACT [OBOL:automatic] synonym: "interleukin-2 7 formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0045527: 30.73 ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0045713 using "low-density lipoprotein receptor formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(low-density lipoprotein receptor, anatomy)]) [-33] ! no existing xp def ! def: "The chemical reactions and pathways resulting in the formation of low-density lipoprotein receptors, cell surface proteins that mediate the endocytosis of low-density lipoprotein by cells." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of anon(low-density lipoprotein receptor, anatomy) [cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(low-density lipoprotein receptor, anatomy)])] [Term] id: GO:0045713 ! low-density lipoprotein receptor biosynthetic process intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of anatomy:low_-_density_lipoprotein_receptor synonym: "low-density lipoprotein receptor anatomical structure formation" EXACT [OBOL:automatic] synonym: "low-density lipoprotein receptor formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0045713: 32.51 ! No parse for: GO:0045736 negative regulation of cyclin-dependent protein kinase activity ! Already have xp for: GO:0045986 negative regulation of smooth muscle contraction ! CURRENT : biological regulation that OBO_REL:negatively_regulates smooth muscle contraction and regulates smooth muscle contraction [cdef(GO:0065007, [OBO_REL:negatively_regulates=GO:0006939, regulates=GO:0006939])] ! No parse for: GO:0046151 eye pigment catabolic process ! No parse for: GO:0046158 ocellus pigment metabolic process ! No parse for: GO:0046159 ocellus pigment catabolic process ! No parse for: GO:0046203 spermidine catabolic process ! No parse for: GO:0046208 spermine catabolic process ! No parse for: GO:0046379 extracellular polysaccharide metabolic process ! No parse for: GO:0046413 organomercury catabolic process ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0046414 using "organomercury formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(organomercury, anatomy)]) [-14] ! no existing xp def ! def: "The chemical reactions and pathways resulting in the formation of organomercury compounds, any organic compound containing a mercury atom." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of anon(organomercury, anatomy) [cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(organomercury, anatomy)])] [Term] id: GO:0046414 ! organomercury biosynthetic process intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of anatomy:organomercury synonym: "organomercury anatomical structure formation" EXACT [OBOL:automatic] synonym: "organomercury formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0046414: 21.36 ! No parse for: GO:0046434 organophosphate catabolic process ! No parse for: GO:0046455 organosilicon catabolic process ! No parse for: GO:0046466 membrane lipid catabolic process ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0046467 using "membrane lipid anabolism" => cdef(GO:0008610, [OBO_REL:results_in_creation_of=GO:0016020]) [-2] ! parse: GO:0046467 using "membrane lipid biosynthesis" => cdef(GO:0008610, [OBO_REL:results_in_creation_of=GO:0016020]) [-2] ! parse: GO:0046467 using "membrane lipid biosynthetic process" => cdef(GO:0008610, [OBO_REL:results_in_creation_of=GO:0016020]) [-2] ! parse: GO:0046467 using "membrane lipid formation" => cdef(GO:0008610, [OBO_REL:results_in_creation_of=GO:0016020]) [-2] ! parse: GO:0046467 using "membrane lipid formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(lipid, anatomy), OBO_REL:unfolds_in=GO:0016020]) [-7] ! parse: GO:0046467 using "membrane lipid synthesis" => cdef(GO:0008610, [OBO_REL:results_in_creation_of=GO:0016020]) [-2] ! no existing xp def ! def: "The chemical reactions and pathways resulting in the formation of membrane lipids, any lipid found in or associated with a biological membrane." ! PROPOSED: lipid biosynthetic process that OBO_REL:results_in_creation_of membrane [cdef(GO:0008610, [OBO_REL:results_in_creation_of=GO:0016020])] [Term] id: GO:0046467 ! membrane lipid biosynthetic process intersection_of: GO:0008610 ! lipid biosynthetic process intersection_of: OBO_REL:results_in_creation_of GO:0016020 ! membrane def: "The aggregation and bonding together of a set of macromolecules to form a membrane" [OBOL:automatic] ! seconds spent parsing GO:0046467: 52.49 ! No parse for: GO:0046469 platelet activating factor metabolic process ! No parse for: GO:0046528 imaginal disc fusion ! parse: GO:0046529 using "imaginal disc fusion, thorax closure" => cdef(cdef(GO:0032502, [OBO_REL:results_in_closure_of=FBbt:00000015]), [OBO_REL:part_of=GO:0046528]) [-3] ! parse: GO:0046529 using "imaginal disc fusion, thorax closure" => cdef(cdef(GO:0032502, [OBO_REL:results_in_closure_of=MA:0000022]), [OBO_REL:part_of=GO:0046528]) [-3] ! no existing xp def ! def: "The joining of the parts of the wing imaginal discs, giving rise to the adult thorax." ! PROPOSED: cdef(GO:0032502, [OBO_REL:results_in_closure_of=MA:0000022]) that OBO_REL:part_of imaginal disc fusion [cdef(cdef(GO:0032502, [OBO_REL:results_in_closure_of=MA:0000022]), [OBO_REL:part_of=GO:0046528])] [Term] id: GO:0046529 ! imaginal disc fusion, thorax closure intersection_of: upper_body_closure intersection_of: OBO_REL:part_of GO:0046528 ! imaginal disc fusion ! seconds spent parsing GO:0046529: 14.38 ! Already have xp for: GO:0046530 photoreceptor cell differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of photoreceptor cell [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000210])] ! parse: GO:0046541 using "saliva secretion" => cdef(GO:0046903, [OBO_REL:results_in_creation_or_release_of=MA:0002507]) [-2] ! no existing xp def ! def: "The regulated release of saliva from the salivary glands. In man, the saliva is a turbid and slightly viscous fluid, generally of an alkaline reaction, and is secreted by the parotid, submaxillary, and sublingual glands. In the mouth the saliva is mixed with the secretion from the buccal glands. In man and many animals, saliva is an important digestive fluid on account of the presence of the peculiar enzyme, ptyalin." ! PROPOSED: secretion that OBO_REL:results_in_creation_or_release_of saliva [cdef(GO:0046903, [OBO_REL:results_in_creation_or_release_of=MA:0002507])] [Term] id: GO:0046541 ! saliva secretion intersection_of: GO:0046903 ! secretion intersection_of: OBO_REL:results_in_creation_or_release_of MA:0002507 ! saliva ! seconds spent parsing GO:0046541: 9.29 ! Already have xp for: GO:0046548 retinal rod cell development ! CURRENT : developmental process that OBO_REL:results_in_developmental_progression_of retinal rod cell [cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=CL:0000604])] ! Already have xp for: GO:0046549 retinal cone cell development ! CURRENT : developmental process that OBO_REL:results_in_developmental_progression_of retinal cone cell [cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=CL:0000573])] ! Already have xp for: GO:0046551 retinal cone cell fate commitment ! CURRENT : cell fate commitment that OBO_REL:results_in_commitment_to retinal cone cell [cdef(GO:0045165, [OBO_REL:results_in_commitment_to=CL:0000573])] ! Already have xp for: GO:0046552 photoreceptor cell fate commitment ! CURRENT : cell fate commitment that OBO_REL:results_in_commitment_to photoreceptor cell [cdef(GO:0045165, [OBO_REL:results_in_commitment_to=CL:0000210])] ! parse: GO:0046590 using "embryonic leg morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(embryonic leg, anatomy)]) [-14] ! parse: GO:0046590 using "embryonic leg morphogenesis" => cdef(GO:0035110, [OBO_REL:part_of=GO:0009790]) [-2] ! parse: GO:0046590 using "embryonic leg morphogenesis" => cdef(GO:0035110, [OBO_REL:results_in_developmental_progression_of=anon(embryonic, anatomy)]) [-10] ! parse: GO:0046590 using "embryonic leg morphogenesis" => cdef(cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00004640]), [OBO_REL:part_of=GO:0009790]) [-3] ! parse: GO:0046590 using "embryonic leg morphogenesis" => cdef(cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000047]), [OBO_REL:part_of=GO:0009790]) [-3] ! no existing xp def ! def: "The process, occurring in the embryo, by which the anatomical structures of the leg are generated and organized. Morphogenesis pertains to the creation of form. A leg is a limb on which an animal walks and stands." ! PROPOSED: leg morphogenesis that OBO_REL:part_of embryonic development [cdef(GO:0035110, [OBO_REL:part_of=GO:0009790])] [Term] id: GO:0046590 ! embryonic leg morphogenesis intersection_of: GO:0035110 ! leg morphogenesis intersection_of: OBO_REL:part_of GO:0009790 ! embryonic development synonym: "embryogenesis, leg morphogenesis" EXACT [OBOL:automatic] synonym: "embryonal development, leg morphogenesis" EXACT [OBOL:automatic] synonym: "embryonic development, leg morphogenesis" EXACT [OBOL:automatic] def: "A leg morphogenesis that is part of a embryogenesis" [OBOL:automatic] ! seconds spent parsing GO:0046590: 10.88 ! parse: GO:0046591 using "embryonic leg joint morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(embryonic leg joint, anatomy)]) [-20] ! parse: GO:0046591 using "embryonic leg joint morphogenesis" => cdef(GO:0035111, [OBO_REL:part_of=GO:0009790]) [-2] ! parse: GO:0046591 using "embryonic leg joint morphogenesis" => cdef(GO:0035111, [OBO_REL:results_in_developmental_progression_of=anon(embryonic, anatomy)]) [-10] ! parse: GO:0046591 using "embryonic leg joint morphogenesis" => cdef(cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00004645, OBO_REL:unfolds_in=FBbt:00004640]), [OBO_REL:part_of=GO:0009790]) [-4] ! parse: GO:0046591 using "embryonic leg joint morphogenesis" => cdef(cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00004645, OBO_REL:unfolds_in=MA:0000047]), [OBO_REL:part_of=GO:0009790]) [-4] ! parse: GO:0046591 using "embryonic leg joint morphogenesis" => cdef(cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000319, OBO_REL:unfolds_in=FBbt:00004640]), [OBO_REL:part_of=GO:0009790]) [-4] ! parse: GO:0046591 using "embryonic leg joint morphogenesis" => cdef(cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000319, OBO_REL:unfolds_in=MA:0000047]), [OBO_REL:part_of=GO:0009790]) [-4] ! parse: GO:0046591 using "embryonic leg joint morphogenesis" => cdef(cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=cdef(FBbt:00004645, [OBO_REL:part_of=FBbt:00004640])]), [OBO_REL:part_of=GO:0009790]) [-4] ! parse: GO:0046591 using "embryonic leg joint morphogenesis" => cdef(cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=cdef(FBbt:00004645, [OBO_REL:part_of=MA:0000047])]), [OBO_REL:part_of=GO:0009790]) [-4] ! parse: GO:0046591 using "embryonic leg joint morphogenesis" => cdef(cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=cdef(MA:0000319, [OBO_REL:part_of=FBbt:00004640])]), [OBO_REL:part_of=GO:0009790]) [-4] ! parse: GO:0046591 using "embryonic leg joint morphogenesis" => cdef(cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=cdef(MA:0000319, [OBO_REL:part_of=MA:0000047])]), [OBO_REL:part_of=GO:0009790]) [-4] ! no existing xp def ! def: "The process, occurring in the embryo, by which the anatomical structures of the leg joint are generated and organized. Morphogenesis pertains to the creation of form. A leg joint is a flexible region that separates the rigid sections of a leg to allow movement in a controlled manner." ! PROPOSED: leg joint morphogenesis that OBO_REL:part_of embryonic development [cdef(GO:0035111, [OBO_REL:part_of=GO:0009790])] [Term] id: GO:0046591 ! embryonic leg joint morphogenesis intersection_of: GO:0035111 ! leg joint morphogenesis intersection_of: OBO_REL:part_of GO:0009790 ! embryonic development synonym: "embryogenesis, leg joint morphogenesis" EXACT [OBOL:automatic] synonym: "embryonal development, leg joint morphogenesis" EXACT [OBOL:automatic] synonym: "embryonic development, leg joint morphogenesis" EXACT [OBOL:automatic] def: "A leg joint morphogenesis that is part of a embryogenesis" [OBOL:automatic] ! seconds spent parsing GO:0046591: 15.47 ! No parse for: GO:0046619 optic placode formation involved in camera-type eye ! Already have xp for: GO:0046629 gamma-delta T cell activation ! CURRENT : cell activation that OBO_REL:results_in_change_to gamma-delta T cell [cdef(GO:0001775, [OBO_REL:results_in_change_to=CL:0000798])] ! Already have xp for: GO:0046630 gamma-delta T cell proliferation ! CURRENT : cell proliferation that OBO_REL:increases_population_size_of gamma-delta T cell [cdef(GO:0008283, [OBO_REL:increases_population_size_of=CL:0000798])] ! Already have xp for: GO:0046631 alpha-beta T cell activation ! CURRENT : cell activation that OBO_REL:results_in_change_to alpha-beta T cell [cdef(GO:0001775, [OBO_REL:results_in_change_to=CL:0000789])] ! Already have xp for: GO:0046632 alpha-beta T cell differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of alpha-beta T cell [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000789])] ! Already have xp for: GO:0046633 alpha-beta T cell proliferation ! CURRENT : cell proliferation that OBO_REL:increases_population_size_of alpha-beta T cell [cdef(GO:0008283, [OBO_REL:increases_population_size_of=CL:0000789])] ! Already have xp for: GO:0046649 lymphocyte activation ! CURRENT : cell activation that OBO_REL:results_in_change_to lymphocyte [cdef(GO:0001775, [OBO_REL:results_in_change_to=CL:0000542])] ! Already have xp for: GO:0046651 lymphocyte proliferation ! CURRENT : cell proliferation that OBO_REL:increases_population_size_of lymphocyte [cdef(GO:0008283, [OBO_REL:increases_population_size_of=CL:0000542])] ! No parse for: GO:0046665 amnioserosa maintenance ! parse: GO:0046666 using "retina cell programmed cell death" => cdef(GO:0008219, [OBO_REL:results_in_developmental_progression_of=anon(programmed, anatomy), OBO_REL:unfolds_in=cdef(ZFA:0009000, [OBO_REL:part_of=FBbt:00004200])]) [-13] ! parse: GO:0046666 using "retina cell programmed cell death" => cdef(GO:0008219, [OBO_REL:results_in_developmental_progression_of=anon(programmed, anatomy), OBO_REL:unfolds_in=cdef(ZFA:0009000, [OBO_REL:part_of=MA:0000276])]) [-13] ! parse: GO:0046666 using "retina cell programmed cell death" => cdef(GO:0008219, [OBO_REL:results_in_developmental_progression_of=anon(programmed, anatomy), OBO_REL:unfolds_in=cdef(ZFA:0009000, [OBO_REL:part_of=ZFA:0000152])]) [-13] ! parse: GO:0046666 using "retina cell programmed cell death" => cdef(GO:0008219, [and=results_in_developmental_progression_of(anon(programmed, anatomy))/unfolds_in(CL:0000000), OBO_REL:unfolds_in=FBbt:00004200]) [-3] ! parse: GO:0046666 using "retina cell programmed cell death" => cdef(GO:0008219, [and=results_in_developmental_progression_of(anon(programmed, anatomy))/unfolds_in(CL:0000000), OBO_REL:unfolds_in=MA:0000276]) [-3] ! parse: GO:0046666 using "retina cell programmed cell death" => cdef(GO:0008219, [and=results_in_developmental_progression_of(anon(programmed, anatomy))/unfolds_in(CL:0000000), OBO_REL:unfolds_in=ZFA:0000152]) [-3] ! parse: GO:0046666 using "retina cell programmed cell death" => cdef(GO:0008219, [and=results_in_developmental_progression_of(anon(programmed, anatomy))/unfolds_in(ZFA:0009000), OBO_REL:unfolds_in=FBbt:00004200]) [-3] ! parse: GO:0046666 using "retina cell programmed cell death" => cdef(GO:0008219, [and=results_in_developmental_progression_of(anon(programmed, anatomy))/unfolds_in(ZFA:0009000), OBO_REL:unfolds_in=MA:0000276]) [-3] ! parse: GO:0046666 using "retina cell programmed cell death" => cdef(GO:0008219, [and=results_in_developmental_progression_of(anon(programmed, anatomy))/unfolds_in(ZFA:0009000), OBO_REL:unfolds_in=ZFA:0000152]) [-3] ! parse: GO:0046666 using "retina cell programmed cell death" => cdef(GO:0012501, [OBO_REL:results_in_death_of=CL:0000000, OBO_REL:unfolds_in=FBbt:00004200]) [-3] ! parse: GO:0046666 using "retina cell programmed cell death" => cdef(GO:0012501, [OBO_REL:results_in_death_of=CL:0000000, OBO_REL:unfolds_in=MA:0000276]) [-3] ! parse: GO:0046666 using "retina cell programmed cell death" => cdef(GO:0012501, [OBO_REL:results_in_death_of=CL:0000000, OBO_REL:unfolds_in=ZFA:0000152]) [-3] ! parse: GO:0046666 using "retina cell programmed cell death" => cdef(GO:0012501, [OBO_REL:results_in_developmental_progression_of=CL:0000000, OBO_REL:unfolds_in=FBbt:00004200]) [-3] ! parse: GO:0046666 using "retina cell programmed cell death" => cdef(GO:0012501, [OBO_REL:results_in_developmental_progression_of=CL:0000000, OBO_REL:unfolds_in=MA:0000276]) [-3] ! parse: GO:0046666 using "retina cell programmed cell death" => cdef(GO:0012501, [OBO_REL:results_in_developmental_progression_of=CL:0000000, OBO_REL:unfolds_in=ZFA:0000152]) [-3] ! parse: GO:0046666 using "retina cell programmed cell death" => cdef(GO:0012501, [OBO_REL:results_in_developmental_progression_of=ZFA:0009000, OBO_REL:unfolds_in=FBbt:00004200]) [-3] ! parse: GO:0046666 using "retina cell programmed cell death" => cdef(GO:0012501, [OBO_REL:results_in_developmental_progression_of=ZFA:0009000, OBO_REL:unfolds_in=MA:0000276]) [-3] ! parse: GO:0046666 using "retina cell programmed cell death" => cdef(GO:0012501, [OBO_REL:results_in_developmental_progression_of=ZFA:0009000, OBO_REL:unfolds_in=ZFA:0000152]) [-3] ! parse: GO:0046666 using "retina cell programmed cell death" => cdef(GO:0012501, [OBO_REL:results_in_developmental_progression_of=cdef(ZFA:0009000, [OBO_REL:part_of=FBbt:00004200])]) [-3] ! parse: GO:0046666 using "retina cell programmed cell death" => cdef(GO:0012501, [OBO_REL:results_in_developmental_progression_of=cdef(ZFA:0009000, [OBO_REL:part_of=MA:0000276])]) [-3] ! parse: GO:0046666 using "retina cell programmed cell death" => cdef(GO:0012501, [OBO_REL:results_in_developmental_progression_of=cdef(ZFA:0009000, [OBO_REL:part_of=ZFA:0000152])]) [-3] ! parse: GO:0046666 using "retina cell programmed cell death" => cdef(GO:0016265, [OBO_REL:results_in_developmental_progression_of=anon(programmed cell, anatomy), OBO_REL:unfolds_in=cdef(ZFA:0009000, [OBO_REL:part_of=FBbt:00004200])]) [-18] ! parse: GO:0046666 using "retina cell programmed cell death" => cdef(GO:0016265, [OBO_REL:results_in_developmental_progression_of=anon(programmed cell, anatomy), OBO_REL:unfolds_in=cdef(ZFA:0009000, [OBO_REL:part_of=MA:0000276])]) [-18] ! parse: GO:0046666 using "retina cell programmed cell death" => cdef(GO:0016265, [OBO_REL:results_in_developmental_progression_of=anon(programmed cell, anatomy), OBO_REL:unfolds_in=cdef(ZFA:0009000, [OBO_REL:part_of=ZFA:0000152])]) [-18] ! parse: GO:0046666 using "retina cell programmed cell death" => cdef(GO:0016265, [and=results_in_developmental_progression_of(anon(programmed cell, anatomy))/unfolds_in(CL:0000000), OBO_REL:unfolds_in=FBbt:00004200]) [-3] ! parse: GO:0046666 using "retina cell programmed cell death" => cdef(GO:0016265, [and=results_in_developmental_progression_of(anon(programmed cell, anatomy))/unfolds_in(CL:0000000), OBO_REL:unfolds_in=MA:0000276]) [-3] ! parse: GO:0046666 using "retina cell programmed cell death" => cdef(GO:0016265, [and=results_in_developmental_progression_of(anon(programmed cell, anatomy))/unfolds_in(CL:0000000), OBO_REL:unfolds_in=ZFA:0000152]) [-3] ! parse: GO:0046666 using "retina cell programmed cell death" => cdef(GO:0016265, [and=results_in_developmental_progression_of(anon(programmed cell, anatomy))/unfolds_in(ZFA:0009000), OBO_REL:unfolds_in=FBbt:00004200]) [-3] ! parse: GO:0046666 using "retina cell programmed cell death" => cdef(GO:0016265, [and=results_in_developmental_progression_of(anon(programmed cell, anatomy))/unfolds_in(ZFA:0009000), OBO_REL:unfolds_in=MA:0000276]) [-3] ! parse: GO:0046666 using "retina cell programmed cell death" => cdef(GO:0016265, [and=results_in_developmental_progression_of(anon(programmed cell, anatomy))/unfolds_in(ZFA:0009000), OBO_REL:unfolds_in=ZFA:0000152]) [-3] ! parse: GO:0046666 using "retina programmed cell death" => cdef(GO:0008219, [OBO_REL:results_in_developmental_progression_of=anon(programmed, anatomy), OBO_REL:unfolds_in=FBbt:00004200]) [-12] ! parse: GO:0046666 using "retina programmed cell death" => cdef(GO:0008219, [OBO_REL:results_in_developmental_progression_of=anon(programmed, anatomy), OBO_REL:unfolds_in=MA:0000276]) [-12] ! parse: GO:0046666 using "retina programmed cell death" => cdef(GO:0008219, [OBO_REL:results_in_developmental_progression_of=anon(programmed, anatomy), OBO_REL:unfolds_in=ZFA:0000152]) [-12] ! parse: GO:0046666 using "retina programmed cell death" => cdef(GO:0012501, [OBO_REL:results_in_developmental_progression_of=FBbt:00004200]) [-2] ! parse: GO:0046666 using "retina programmed cell death" => cdef(GO:0012501, [OBO_REL:results_in_developmental_progression_of=MA:0000276]) [-2] ! parse: GO:0046666 using "retina programmed cell death" => cdef(GO:0012501, [OBO_REL:results_in_developmental_progression_of=ZFA:0000152]) [-2] ! parse: GO:0046666 using "retina programmed cell death" => cdef(GO:0016265, [OBO_REL:results_in_developmental_progression_of=anon(programmed cell, anatomy), OBO_REL:unfolds_in=FBbt:00004200]) [-17] ! parse: GO:0046666 using "retina programmed cell death" => cdef(GO:0016265, [OBO_REL:results_in_developmental_progression_of=anon(programmed cell, anatomy), OBO_REL:unfolds_in=MA:0000276]) [-17] ! parse: GO:0046666 using "retina programmed cell death" => cdef(GO:0016265, [OBO_REL:results_in_developmental_progression_of=anon(programmed cell, anatomy), OBO_REL:unfolds_in=ZFA:0000152]) [-17] ! parse: GO:0046666 using "retinal cell programmed cell death" => cdef(GO:0008219, [OBO_REL:results_in_developmental_progression_of=anon(retinal cell programmed, anatomy)]) [-24] ! parse: GO:0046666 using "retinal cell programmed cell death" => cdef(GO:0012501, [OBO_REL:results_in_developmental_progression_of=anon(retinal cell, anatomy)]) [-13] ! parse: GO:0046666 using "retinal cell programmed cell death" => cdef(GO:0016265, [OBO_REL:results_in_developmental_progression_of=anon(retinal cell programmed cell, anatomy)]) [-29] ! parse: GO:0046666 using "retinal programmed cell death" => cdef(GO:0008219, [OBO_REL:results_in_developmental_progression_of=anon(retinal programmed, anatomy)]) [-19] ! parse: GO:0046666 using "retinal programmed cell death" => cdef(GO:0012501, [OBO_REL:results_in_developmental_progression_of=anon(retinal, anatomy)]) [-8] ! parse: GO:0046666 using "retinal programmed cell death" => cdef(GO:0016265, [OBO_REL:results_in_developmental_progression_of=anon(retinal programmed cell, anatomy)]) [-24] ! no existing xp def ! def: "Programmed cell death that occurs in the developing retina." ! PROPOSED: programmed cell death that OBO_REL:results_in_developmental_progression_of retina [cdef(GO:0012501, [OBO_REL:results_in_developmental_progression_of=ZFA:0000152])] [Term] id: GO:0046666 ! retinal cell programmed cell death intersection_of: GO:0012501 ! programmed cell death intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0000152 ! retina ! seconds spent parsing GO:0046666: 54.6 ! parse: GO:0046667 using "compound eye retinal cell programmed cell death" => cdef(GO:0008219, [OBO_REL:results_in_developmental_progression_of=anon(retinal cell programmed, anatomy), OBO_REL:unfolds_in=FBbt:00004508]) [-25] ! parse: GO:0046667 using "compound eye retinal cell programmed cell death" => cdef(GO:0008219, [and=results_in_developmental_progression_of(anon(retinal cell programmed, anatomy))/unfolds_in(FBbt:00004508), OBO_REL:unfolds_in=cell:compound]) [-3] ! parse: GO:0046667 using "compound eye retinal cell programmed cell death" => cdef(GO:0008219, [and=results_in_developmental_progression_of(anon(retinal cell programmed, anatomy))/unfolds_in(MA:0000261), OBO_REL:unfolds_in=cell:compound]) [-3] ! parse: GO:0046667 using "compound eye retinal cell programmed cell death" => cdef(GO:0008219, [and=results_in_developmental_progression_of(anon(retinal cell programmed, anatomy))/unfolds_in(ZFA:0000107), OBO_REL:unfolds_in=cell:compound]) [-3] ! parse: GO:0046667 using "compound eye retinal cell programmed cell death" => cdef(GO:0012501, [OBO_REL:results_in_developmental_progression_of=anon(retinal cell, anatomy), OBO_REL:unfolds_in=FBbt:00004508]) [-14] ! parse: GO:0046667 using "compound eye retinal cell programmed cell death" => cdef(GO:0012501, [and=results_in_developmental_progression_of(anon(retinal cell, anatomy))/unfolds_in(FBbt:00004508), OBO_REL:unfolds_in=cell:compound]) [-3] ! parse: GO:0046667 using "compound eye retinal cell programmed cell death" => cdef(GO:0012501, [and=results_in_developmental_progression_of(anon(retinal cell, anatomy))/unfolds_in(MA:0000261), OBO_REL:unfolds_in=cell:compound]) [-3] ! parse: GO:0046667 using "compound eye retinal cell programmed cell death" => cdef(GO:0012501, [and=results_in_developmental_progression_of(anon(retinal cell, anatomy))/unfolds_in(ZFA:0000107), OBO_REL:unfolds_in=cell:compound]) [-3] ! parse: GO:0046667 using "compound eye retinal cell programmed cell death" => cdef(GO:0016265, [OBO_REL:results_in_developmental_progression_of=anon(retinal cell programmed cell, anatomy), OBO_REL:unfolds_in=FBbt:00004508]) [-30] ! parse: GO:0046667 using "compound eye retinal cell programmed cell death" => cdef(GO:0016265, [and=results_in_developmental_progression_of(anon(retinal cell programmed cell, anatomy))/unfolds_in(FBbt:00004508), OBO_REL:unfolds_in=cell:compound]) [-3] ! parse: GO:0046667 using "compound eye retinal cell programmed cell death" => cdef(GO:0016265, [and=results_in_developmental_progression_of(anon(retinal cell programmed cell, anatomy))/unfolds_in(MA:0000261), OBO_REL:unfolds_in=cell:compound]) [-3] ! parse: GO:0046667 using "compound eye retinal cell programmed cell death" => cdef(GO:0016265, [and=results_in_developmental_progression_of(anon(retinal cell programmed cell, anatomy))/unfolds_in(ZFA:0000107), OBO_REL:unfolds_in=cell:compound]) [-3] ! parse: GO:0046667 using "compound eye retinal cell programmed cell death" => cdef(GO:0046666, [OBO_REL:results_in_developmental_progression_of=FBbt:00004508]) [-2] ! parse: GO:0046667 using "compound eye retinal cell programmed cell death" => cdef(GO:0046666, [OBO_REL:results_in_developmental_progression_of=FBbt:00004508, OBO_REL:unfolds_in=cell:compound]) [-3] ! parse: GO:0046667 using "compound eye retinal cell programmed cell death" => cdef(GO:0046666, [OBO_REL:results_in_developmental_progression_of=MA:0000261, OBO_REL:unfolds_in=cell:compound]) [-3] ! parse: GO:0046667 using "compound eye retinal cell programmed cell death" => cdef(GO:0046666, [OBO_REL:results_in_developmental_progression_of=ZFA:0000107, OBO_REL:unfolds_in=cell:compound]) [-3] ! no existing xp def ! def: "Programmed cell death that occurs in the retina to remove excess cells between ommatidia, thus resulting in a hexagonal lattice, precise with respect to cell number and position surrounding each ommatidia." ! PROPOSED: retinal cell programmed cell death that OBO_REL:results_in_developmental_progression_of eye [cdef(GO:0046666, [OBO_REL:results_in_developmental_progression_of=FBbt:00004508])] [Term] id: GO:0046667 ! compound eye retinal cell programmed cell death intersection_of: GO:0046666 ! retinal cell programmed cell death intersection_of: OBO_REL:results_in_developmental_progression_of FBbt:00004508 ! eye synonym: "eye retinal cell programmed cell death" EXACT [OBOL:automatic] ! seconds spent parsing GO:0046667: 51.46 ! No parse for: GO:0046683 response to organophosphorus ! No parse for: GO:0046692 sperm competition ! No parse for: GO:0046693 sperm storage ! No parse for: GO:0046694 sperm incapacitation ! No parse for: GO:0046716 muscle maintenance ! No parse for: GO:0046732 active induction of host immune response by virus ! No parse for: GO:0046736 active induction of humoral immune response in host by virus ! No parse for: GO:0046737 active induction of cell-mediated immune response in host by virus ! No parse for: GO:0046738 active induction of innate immune response in host by virus ! No parse for: GO:0046740 spread of virus within host, cell to cell ! No parse for: GO:0046741 spread of virus within host, tissue to tissue ! parse: GO:0046742 using "viral capsid transport in host cell nucleus" => cdef(GO:0006810, [OBO_REL:unfolds_in=GO:0042025, OBO_REL:unfolds_in=GO:0019028]) [-3] ! parse: GO:0046742 using "viral capsid transport in host cell nucleus" => cdef(GO:0006810, [OBO_REL:unfolds_in=cdef(GO:0005634, [OBO_REL:part_of=GO:0043657]), OBO_REL:unfolds_in=GO:0019028]) [-4] ! parse: GO:0046742 using "viral capsid transport in host cell nucleus" => cdef(cdef(GO:0006810, [OBO_REL:results_in_transport_of=GO:0019028]), [OBO_REL:unfolds_in=GO:0042025]) [-3] ! parse: GO:0046742 using "viral capsid transport in host cell nucleus" => cdef(cdef(GO:0006810, [OBO_REL:results_in_transport_of=GO:0019028]), [OBO_REL:unfolds_in=cdef(GO:0005634, [OBO_REL:part_of=GO:0043657])]) [-4] ! no existing xp def ! def: "The directed movement of viral capsid proteins within the nucleus of the host cell." ! PROPOSED: cdef(GO:0006810, [OBO_REL:results_in_transport_of=GO:0019028]) that OBO_REL:unfolds_in host cell nucleus [cdef(cdef(GO:0006810, [OBO_REL:results_in_transport_of=GO:0019028]), [OBO_REL:unfolds_in=GO:0042025])] [Term] id: GO:0046742 ! viral capsid transport in host cell nucleus intersection_of: viral_capsid_(_sensu_Retroviridae_)_hydrolase_activity_,_acting_on_acid_anhydrides_,_acting_on_GTP_,_involved_in_cellular_and_subcellular_movement intersection_of: OBO_REL:unfolds_in GO:0042025 ! host cell nucleus ! seconds spent parsing GO:0046742: 16.62 ! parse: GO:0046743 using "viral capsid transport in host cell cytoplasm" => cdef(GO:0006810, [OBO_REL:unfolds_in=GO:0030430, OBO_REL:unfolds_in=GO:0019028]) [-3] ! parse: GO:0046743 using "viral capsid transport in host cell cytoplasm" => cdef(GO:0006810, [OBO_REL:unfolds_in=cdef(GO:0005737, [OBO_REL:part_of=GO:0043657]), OBO_REL:unfolds_in=GO:0019028]) [-4] ! parse: GO:0046743 using "viral capsid transport in host cell cytoplasm" => cdef(cdef(GO:0006810, [OBO_REL:results_in_transport_of=GO:0019028]), [OBO_REL:unfolds_in=GO:0030430]) [-3] ! parse: GO:0046743 using "viral capsid transport in host cell cytoplasm" => cdef(cdef(GO:0006810, [OBO_REL:results_in_transport_of=GO:0019028]), [OBO_REL:unfolds_in=cdef(GO:0005737, [OBO_REL:part_of=GO:0043657])]) [-4] ! no existing xp def ! def: "The directed movement of viral capsid proteins within the cytoplasm of the host cell." ! PROPOSED: cdef(GO:0006810, [OBO_REL:results_in_transport_of=GO:0019028]) that OBO_REL:unfolds_in host cell cytoplasm [cdef(cdef(GO:0006810, [OBO_REL:results_in_transport_of=GO:0019028]), [OBO_REL:unfolds_in=GO:0030430])] [Term] id: GO:0046743 ! viral capsid transport in host cell cytoplasm intersection_of: viral_capsid_(_sensu_Retroviridae_)_hydrolase_activity_,_acting_on_acid_anhydrides_,_acting_on_GTP_,_involved_in_cellular_and_subcellular_movement intersection_of: OBO_REL:unfolds_in GO:0030430 ! host cell cytoplasm ! seconds spent parsing GO:0046743: 16.59 ! No parse for: GO:0046744 viral capsid envelopment ! No parse for: GO:0046745 viral capsid re-envelopment ! Already have xp for: GO:0046746 virus budding from nuclear membrane during viral capsid re-envelopment ! CURRENT : virus budding from nuclear membrane that OBO_REL:part_of viral capsid re-envelopment [cdef(GO:0046765, [OBO_REL:part_of=GO:0046745])] ! Already have xp for: GO:0046747 virus budding from Golgi membrane during viral capsid re-envelopment ! CURRENT : virus budding from Golgi membrane that OBO_REL:part_of viral capsid re-envelopment [cdef(GO:0046763, [OBO_REL:part_of=GO:0046745])] ! Already have xp for: GO:0046748 virus budding from ER membrane during viral capsid re-envelopment ! CURRENT : virus budding from ER membrane that OBO_REL:part_of viral capsid re-envelopment [cdef(GO:0046764, [OBO_REL:part_of=GO:0046745])] ! Already have xp for: GO:0046749 virus budding from nuclear membrane during viral capsid envelopment ! CURRENT : virus budding from nuclear membrane that OBO_REL:part_of viral capsid envelopment [cdef(GO:0046765, [OBO_REL:part_of=GO:0046744])] ! Already have xp for: GO:0046750 virus budding from Golgi membrane during viral capsid envelopment ! CURRENT : virus budding from Golgi membrane that OBO_REL:part_of viral capsid envelopment [cdef(GO:0046763, [OBO_REL:part_of=GO:0046744])] ! Already have xp for: GO:0046751 virus budding from ER membrane during viral capsid envelopment ! CURRENT : virus budding from ER membrane that OBO_REL:part_of viral capsid envelopment [cdef(GO:0046764, [OBO_REL:part_of=GO:0046744])] ! No parse for: GO:0046752 viral capsid precursor localization in host cell nucleus ! No parse for: GO:0046763 virus budding from Golgi membrane ! No parse for: GO:0046764 virus budding from ER membrane ! No parse for: GO:0046765 virus budding from nuclear membrane ! No parse for: GO:0046766 virus budding from plasma membrane ! Already have xp for: GO:0046767 virus budding from plasma membrane during viral capsid envelopment ! CURRENT : virus budding from plasma membrane that OBO_REL:part_of viral capsid envelopment [cdef(GO:0046766, [OBO_REL:part_of=GO:0046744])] ! Already have xp for: GO:0046768 virus budding from plasma membrane during viral capsid re-envelopment ! CURRENT : virus budding from plasma membrane that OBO_REL:part_of viral capsid re-envelopment [cdef(GO:0046766, [OBO_REL:part_of=GO:0046745])] ! No parse for: GO:0046785 microtubule polymerization ! No parse for: GO:0046786 viral replication complex formation and maintenance ! parse: GO:0046794 using "virion transport" => cdef(GO:0006810, [OBO_REL:results_in_transport_of=GO:0019012]) [-2] ! no existing xp def ! def: "The directed movement of a virion into, out of, or within a host cell." ! PROPOSED: transport that OBO_REL:results_in_transport_of virion [cdef(GO:0006810, [OBO_REL:results_in_transport_of=GO:0019012])] [Term] id: GO:0046794 ! virion transport intersection_of: GO:0006810 ! transport intersection_of: OBO_REL:results_in_transport_of GO:0019012 ! virion synonym: "complete virus particle hydrolase activity, acting on acid anhydrides, acting on GTP, involved in cellular and subcellular movement" EXACT [OBOL:automatic] synonym: "complete virus particle transport" EXACT [OBOL:automatic] ! seconds spent parsing GO:0046794: 6.16 ! No relation defined: contained_by ! No relation defined: contained_by ! No relation defined: contained_by ! No relation defined: contained_by ! parse: GO:0046795 using "intracellular virion transport" => cdef(GO:0006810, [OBO_REL:results_in_transport_of=GO:0019012, OBO_REL:unfolds_in=CL:0000001]) [-3] ! parse: GO:0046795 using "intracellular virion transport" => cdef(GO:0006810, [OBO_REL:results_in_transport_of=GO:0019012, OBO_REL:unfolds_in=GO:0005622]) [-3] ! parse: GO:0046795 using "intracellular virion transport" => cdef(GO:0006810, [OBO_REL:results_in_transport_of=cdef(GO:0019012, [OBO_REL:part_of=GO:0005622])]) [-3] ! parse: GO:0046795 using "intracellular virion transport" => cdef(GO:0006810, [OBO_REL:results_in_transport_of=cdef(GO:0019012, [contained_by=CARO:0000013])]) [-3] ! parse: GO:0046795 using "intracellular virion transport" => cdef(GO:0006810, [OBO_REL:results_in_transport_of=cdef(GO:0019012, [contained_by=CL:0000000])]) [-3] ! parse: GO:0046795 using "intracellular virion transport" => cdef(GO:0006810, [OBO_REL:results_in_transport_of=cdef(GO:0019012, [contained_by=GO:0005623])]) [-3] ! parse: GO:0046795 using "intracellular virion transport" => cdef(GO:0006810, [OBO_REL:results_in_transport_of=cdef(GO:0019012, [contained_by=ZFA:0009000])]) [-3] ! parse: GO:0046795 using "intracellular virion transport" => cdef(GO:0046794, [OBO_REL:results_in_transport_of=GO:0005622]) [-2] ! no existing xp def ! def: "The directed movement of a virion within a host cell from one location to another." ! PROPOSED: virion transport that OBO_REL:results_in_transport_of intracellular [cdef(GO:0046794, [OBO_REL:results_in_transport_of=GO:0005622])] [Term] id: GO:0046795 ! intracellular virion transport intersection_of: GO:0046794 ! virion transport intersection_of: OBO_REL:results_in_transport_of GO:0005622 ! intracellular synonym: "protoplasm virion transport" EXACT [OBOL:automatic] ! seconds spent parsing GO:0046795: 15.6 ! parse: GO:0046796 using "viral genome transport in host cell" => cdef(GO:0006810, [OBO_REL:unfolds_in=GO:0043657, OBO_REL:unfolds_in=GO:0019015]) [-3] ! parse: GO:0046796 using "viral genome transport in host cell" => cdef(cdef(GO:0006810, [OBO_REL:results_in_transport_of=GO:0019015]), [OBO_REL:unfolds_in=GO:0043657]) [-3] ! no existing xp def ! def: "The directed movement of the viral genome(s) within a host cell." ! PROPOSED: cdef(GO:0006810, [OBO_REL:results_in_transport_of=GO:0019015]) that OBO_REL:unfolds_in host cell [cdef(cdef(GO:0006810, [OBO_REL:results_in_transport_of=GO:0019015]), [OBO_REL:unfolds_in=GO:0043657])] [Term] id: GO:0046796 ! viral genome transport in host cell intersection_of: cdef('GO:0006810', ['OBO_REL:results_in_transport_of'='GO:0019015']) intersection_of: OBO_REL:unfolds_in GO:0043657 ! host cell ! seconds spent parsing GO:0046796: 11.74 ! parse: GO:0046797 using "viral procapsid maturation" => cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=GO:0046729]) [-2] ! no existing xp def ! def: "The period of virion development during which the capsid components form the immature capsid and encapsulate the viral genome; the capsid often undergoes a number of structural alterations during this period." ! PROPOSED: developmental maturation that OBO_REL:results_in_developmental_progression_of viral procapsid [cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=GO:0046729])] [Term] id: GO:0046797 ! viral procapsid maturation intersection_of: GO:0021700 ! developmental maturation intersection_of: OBO_REL:results_in_developmental_progression_of GO:0046729 ! viral procapsid synonym: "viral procapsid developmental maturation" EXACT [OBOL:automatic] ! seconds spent parsing GO:0046797: 5.67 ! No relation defined: contained_by ! No relation defined: contained_by ! No relation defined: contained_by ! No relation defined: contained_by ! parse: GO:0046801 using "intracellular viral capsid transport" => cdef(GO:0006810, [OBO_REL:results_in_transport_of=GO:0019028, OBO_REL:unfolds_in=CL:0000001]) [-3] ! parse: GO:0046801 using "intracellular viral capsid transport" => cdef(GO:0006810, [OBO_REL:results_in_transport_of=GO:0019028, OBO_REL:unfolds_in=GO:0005622]) [-3] ! parse: GO:0046801 using "intracellular viral capsid transport" => cdef(GO:0006810, [OBO_REL:results_in_transport_of=cdef(GO:0019028, [OBO_REL:part_of=GO:0005622])]) [-3] ! parse: GO:0046801 using "intracellular viral capsid transport" => cdef(GO:0006810, [OBO_REL:results_in_transport_of=cdef(GO:0019028, [contained_by=CARO:0000013])]) [-3] ! parse: GO:0046801 using "intracellular viral capsid transport" => cdef(GO:0006810, [OBO_REL:results_in_transport_of=cdef(GO:0019028, [contained_by=CL:0000000])]) [-3] ! parse: GO:0046801 using "intracellular viral capsid transport" => cdef(GO:0006810, [OBO_REL:results_in_transport_of=cdef(GO:0019028, [contained_by=GO:0005623])]) [-3] ! parse: GO:0046801 using "intracellular viral capsid transport" => cdef(GO:0006810, [OBO_REL:results_in_transport_of=cdef(GO:0019028, [contained_by=ZFA:0009000])]) [-3] ! no existing xp def ! def: "The directed movement of viral capsid proteins within the host cell." ! PROPOSED: transport that OBO_REL:results_in_transport_of cdef(GO:0019028, [contained_by=ZFA:0009000]) [cdef(GO:0006810, [OBO_REL:results_in_transport_of=cdef(GO:0019028, [contained_by=ZFA:0009000])])] [Term] id: GO:0046801 ! intracellular transport of viral capsid in host cell intersection_of: GO:0006810 ! transport intersection_of: OBO_REL:results_in_transport_of intracellular_viral_capsid synonym: "intracellular viral capsid (sensu Retroviridae) hydrolase activity, acting on acid anhydrides, acting on GTP, involved in cellular and subcellular movement" EXACT [OBOL:automatic] synonym: "intracellular viral capsid (sensu Retroviridae) transport" EXACT [OBOL:automatic] ! seconds spent parsing GO:0046801: 43.96 ! parse: GO:0046807 using "viral scaffold assembly and maintenance" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0046806]) [-2] ! no existing xp def ! def: "The assembly and maintenance of the viral scaffold around which the viral capsid is constructed." ! PROPOSED: cellular component assembly that OBO_REL:results_in_creation_of viral scaffold [cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0046806])] [Term] id: GO:0046807 ! viral scaffold assembly and maintenance intersection_of: GO:0022607 ! cellular component assembly intersection_of: OBO_REL:results_in_creation_of GO:0046806 ! viral scaffold synonym: "assembly and maintenance of viral scaffold" EXACT [OBOL:automatic] synonym: "assembly of viral scaffold" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of viral scaffold" EXACT [OBOL:automatic] synonym: "biogenesis of viral scaffold" EXACT [OBOL:automatic] synonym: "cell structure assembly of viral scaffold" EXACT [OBOL:automatic] synonym: "cellular component assembly of viral scaffold" EXACT [OBOL:automatic] synonym: "complex assembly of viral scaffold" EXACT [OBOL:automatic] synonym: "formation of viral scaffold" EXACT [OBOL:automatic] synonym: "viral scaffold assembly" EXACT [OBOL:automatic] synonym: "viral scaffold biogenesis" EXACT [OBOL:automatic] synonym: "viral scaffold biogenesis and assembly" EXACT [OBOL:automatic] synonym: "viral scaffold cell structure assembly" EXACT [OBOL:automatic] synonym: "viral scaffold cellular component assembly" EXACT [OBOL:automatic] synonym: "viral scaffold complex assembly" EXACT [OBOL:automatic] synonym: "viral scaffold formation" EXACT [OBOL:automatic] def: "The aggregation and bonding together of a set of macromolecules to form a viral scaffold" [OBOL:automatic] ! seconds spent parsing GO:0046807: 5.77 ! No parse for: GO:0046813 virion attachment, binding of host cell surface receptor ! No parse for: GO:0046814 virion attachment, binding of host cell surface coreceptor ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0046843 using "dorsal appendage formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=FBbt:00000046]) [-2] ! parse: GO:0046843 using "dorsal appendage formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=FBbt:00000046]) [-2] ! no existing xp def ! def: "Establishment of the dorsal filaments, elaborate specializations of the chorion that protrude from the anterior end of the egg and facilitate embryonic respiration." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of dorsal appendage [cdef(GO:0048646, [OBO_REL:results_in_formation_of=FBbt:00000046])] [Term] id: GO:0046843 ! dorsal appendage formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of FBbt:00000046 ! dorsal appendage ! seconds spent parsing GO:0046843: 5.5 ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0046844 using "micropyle formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=FBbt:00000043]) [-2] ! parse: GO:0046844 using "micropyle formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=PO:0020025]) [-2] ! parse: GO:0046844 using "micropyle formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=FBbt:00000043]) [-2] ! parse: GO:0046844 using "micropyle formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=PO:0020025]) [-2] ! no existing xp def ! def: "Establishment of the micropyle, a single cone-shaped specialization of the chorion that allows sperm entry into the egg prior to fertilization." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of micropyle [cdef(GO:0048646, [OBO_REL:results_in_formation_of=PO:0020025])] [Term] id: GO:0046844 ! micropyle formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of PO:0020025 ! micropyle ! seconds spent parsing GO:0046844: 6.34 ! No parse for: GO:0046845 branched duct epithelial cell fate determination, open tracheal system ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0046847 using "filopodia formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(filopodia, anatomy)]) [-10] ! parse: GO:0046847 using "filopodium formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=GO:0030175]) [-2] ! parse: GO:0046847 using "filopodium formation" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0030175]) [-2] ! parse: GO:0046847 using "filopodium formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0030175]) [-2] ! no existing xp def ! def: "The assembly of a filopodium, a very long microspike extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or by the growth cone of a developing nerve cell axon." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of filopodium [cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0030175])] [Term] id: GO:0046847 ! filopodium formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of GO:0030175 ! filopodium synonym: "filopodium anatomical structure formation" EXACT [OBOL:automatic] synonym: "filopodium formation of an anatomical structure" EXACT [OBOL:automatic] synonym: "microspike anatomical structure formation" EXACT [OBOL:automatic] synonym: "microspike formation" EXACT [OBOL:automatic] synonym: "microspike formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0046847: 14.83 ! No parse for: GO:0046849 bone remodeling ! No parse for: GO:0046879 hormone secretion ! No parse for: GO:0046884 follicle-stimulating hormone secretion ! No parse for: GO:0046894 enzyme active site formation via S-amidino-L-cysteine ! parse: GO:0046907 using "intracellular transport" => cdef(GO:0006810, [OBO_REL:results_in_transport_of=GO:0005622]) [-2] ! no existing xp def ! def: "The directed movement of substances within a cell." ! PROPOSED: transport that OBO_REL:results_in_transport_of intracellular [cdef(GO:0006810, [OBO_REL:results_in_transport_of=GO:0005622])] [Term] id: GO:0046907 ! intracellular transport intersection_of: GO:0006810 ! transport intersection_of: OBO_REL:results_in_transport_of GO:0005622 ! intracellular synonym: "protoplasm hydrolase activity, acting on acid anhydrides, acting on GTP, involved in cellular and subcellular movement" EXACT [OBOL:automatic] synonym: "protoplasm transport" EXACT [OBOL:automatic] ! seconds spent parsing GO:0046907: 6.99 ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0046931 using "pore biosynthesis" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=GO:0046930]) [-2] ! parse: GO:0046931 using "pore complex biogenesis" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0046930]) [-2] ! parse: GO:0046931 using "pore formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=GO:0046930]) [-2] ! parse: GO:0046931 using "pore formation" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0046930]) [-2] ! parse: GO:0046931 using "pore formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0046930]) [-2] ! no existing xp def ! def: "The formation of a pore complex, a small opening in a membrane that allows the passage of liquids and/or gases." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of pore complex [cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0046930])] [Term] id: GO:0046931 ! pore complex biogenesis intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of GO:0046930 ! pore complex synonym: "channel-forming toxin activity anatomical structure formation" EXACT [OBOL:automatic] synonym: "channel-forming toxin activity formation" EXACT [OBOL:automatic] synonym: "channel-forming toxin activity formation of an anatomical structure" EXACT [OBOL:automatic] synonym: "colicin anatomical structure formation" EXACT [OBOL:automatic] synonym: "colicin formation" EXACT [OBOL:automatic] synonym: "colicin formation of an anatomical structure" EXACT [OBOL:automatic] synonym: "pore anatomical structure formation" EXACT [OBOL:automatic] synonym: "pore complex anatomical structure formation" EXACT [OBOL:automatic] synonym: "pore complex formation" EXACT [OBOL:automatic] synonym: "pore complex formation of an anatomical structure" EXACT [OBOL:automatic] synonym: "pore formation of an anatomical structure" EXACT [OBOL:automatic] synonym: "pore-forming toxin activity anatomical structure formation" EXACT [OBOL:automatic] synonym: "pore-forming toxin activity formation" EXACT [OBOL:automatic] synonym: "pore-forming toxin activity formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0046931: 23.53 ! parse: GO:0046967 using "cytosol to ER transport" => cdef(GO:0006810, [OBO_REL:results_in_transport_from=GO:0005829, OBO_REL:results_in_transport_to=GO:0005783]) [-3] ! parse: GO:0046967 using "cytosol to ER transport" => cdef(GO:0006810, [and=results_in_transport_of(GO:0005783)/unfolds_in(FBbt:00002690), OBO_REL:unfolds_in=GO:0005829]) [-3] ! parse: GO:0046967 using "cytosol to endoplasmic reticulum transport" => cdef(GO:0006810, [OBO_REL:results_in_transport_from=GO:0005829, OBO_REL:results_in_transport_to=GO:0005783]) [-3] ! parse: GO:0046967 using "cytosol to endoplasmic reticulum transport" => cdef(GO:0006810, [and=results_in_transport_of(GO:0005783)/unfolds_in(FBbt:00002690), OBO_REL:unfolds_in=GO:0005829]) [-3] ! no existing xp def ! def: "The directed movement of substances from the cytosol to the endoplasmic reticulum of a cell." ! PROPOSED: transport that and results_in_transport_of(GO:0005783)/unfolds_in(FBbt:00002690) and OBO_REL:unfolds_in cytosol [cdef(GO:0006810, [and=results_in_transport_of(GO:0005783)/unfolds_in(FBbt:00002690), OBO_REL:unfolds_in=GO:0005829])] [Term] id: GO:0046967 ! cytosol to ER transport intersection_of: GO:0006810 ! transport intersection_of: and results_in_transport_of(GO:0005783)/unfolds_in(FBbt:00002690) intersection_of: OBO_REL:unfolds_in GO:0005829 ! cytosol ! seconds spent parsing GO:0046967: 34.72 ! No parse for: GO:0047496 vesicle transport along microtubule ! No parse for: GO:0047497 mitochondrion transport along microtubule ! No parse for: GO:0048008 platelet-derived growth factor receptor signaling pathway ! No parse for: GO:0048009 insulin-like growth factor receptor signaling pathway ! No parse for: GO:0048010 vascular endothelial growth factor receptor signaling pathway ! No parse for: GO:0048011 nerve growth factor receptor signaling pathway ! No parse for: GO:0048012 hepatocyte growth factor receptor signaling pathway ! No parse for: GO:0048013 ephrin receptor signaling pathway ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0048036 using "central body development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00003632]) [-2] ! parse: GO:0048036 using "central complex development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00003632]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the central complex over time, from its formation to the mature structure. The central complex region of the insect brain is thought to be crucial for control of locomotive behavior. Located in the middle of the two protocerebral hemispheres, it comprises four neuropilar regions, the fan-shaped body, the ellipsoid body, the protocerebral bridge and the paired noduli." ! PROPOSED: developmental process that results_in_complete_developmental_of central body complex [cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00003632])] [Term] id: GO:0048036 ! central complex development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of FBbt:00003632 ! central body complex synonym: "central body complex development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0048036: 10.15 ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0048041 using "focal adhesion formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=GO:0005925]) [-2] ! parse: GO:0048041 using "focal adhesion formation" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0005925]) [-2] ! parse: GO:0048041 using "focal adhesion formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0005925]) [-2] ! no existing xp def ! def: "Establishment and maturation of focal adhesions, complexes of intracellular signaling and structural proteins which provide a structural link between the internal actin cytoskeleton and the ECM, and also function as a locus of signal transduction activity." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of focal adhesion [cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0005925])] [Term] id: GO:0048041 ! focal adhesion formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of GO:0005925 ! focal adhesion synonym: "focal adhesion anatomical structure formation" EXACT [OBOL:automatic] synonym: "focal adhesion formation of an anatomical structure" EXACT [OBOL:automatic] synonym: "focal contact anatomical structure formation" EXACT [OBOL:automatic] synonym: "focal contact formation" EXACT [OBOL:automatic] synonym: "focal contact formation of an anatomical structure" EXACT [OBOL:automatic] synonym: "hemi-adherens junction anatomical structure formation" EXACT [OBOL:automatic] synonym: "hemi-adherens junction formation" EXACT [OBOL:automatic] synonym: "hemi-adherens junction formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0048041: 6.29 ! parse: GO:0048048 using "embryonic eye morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(embryonic eye, anatomy)]) [-14] ! parse: GO:0048048 using "embryonic eye morphogenesis" => cdef(GO:0048592, [OBO_REL:part_of=GO:0009790]) [-2] ! parse: GO:0048048 using "embryonic eye morphogenesis" => cdef(GO:0048592, [OBO_REL:results_in_developmental_progression_of=anon(embryonic, anatomy)]) [-10] ! parse: GO:0048048 using "embryonic eye morphogenesis" => cdef(cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00004508]), [OBO_REL:part_of=GO:0009790]) [-3] ! parse: GO:0048048 using "embryonic eye morphogenesis" => cdef(cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000261]), [OBO_REL:part_of=GO:0009790]) [-3] ! parse: GO:0048048 using "embryonic eye morphogenesis" => cdef(cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0000107]), [OBO_REL:part_of=GO:0009790]) [-3] ! no existing xp def ! def: "The process occurring in the embryo by which the anatomical structures of the post-embryonic eye are generated and organized. Morphogenesis pertains to the creation of form." ! PROPOSED: eye morphogenesis that OBO_REL:part_of embryonic development [cdef(GO:0048592, [OBO_REL:part_of=GO:0009790])] [Term] id: GO:0048048 ! embryonic eye morphogenesis intersection_of: GO:0048592 ! eye morphogenesis intersection_of: OBO_REL:part_of GO:0009790 ! embryonic development synonym: "embryogenesis, eye morphogenesis" EXACT [OBOL:automatic] synonym: "embryogenesis, eye morphogenesis (sensu Endopterygota)" EXACT [OBOL:automatic] synonym: "embryonal development, eye morphogenesis" EXACT [OBOL:automatic] synonym: "embryonal development, eye morphogenesis (sensu Endopterygota)" EXACT [OBOL:automatic] synonym: "embryonic development, eye morphogenesis" EXACT [OBOL:automatic] synonym: "embryonic development, eye morphogenesis (sensu Endopterygota)" EXACT [OBOL:automatic] synonym: "embryonic eye morphogenesis (sensu Endopterygota)" EXACT [OBOL:automatic] def: "A eye morphogenesis (sensu Endopterygota) that is part of a embryogenesis" [OBOL:automatic] ! seconds spent parsing GO:0048048: 4.93 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0048058 using "compound eye corneal lens development" => cdef(GO:0032502, [and=results_in_complete_developmental_of(anon(corneal lens, anatomy))/unfolds_in(FBbt:00004508), OBO_REL:unfolds_in=cell:compound]) [-3] ! parse: GO:0048058 using "compound eye corneal lens development" => cdef(GO:0032502, [and=results_in_complete_developmental_of(anon(corneal lens, anatomy))/unfolds_in(MA:0000261), OBO_REL:unfolds_in=cell:compound]) [-3] ! parse: GO:0048058 using "compound eye corneal lens development" => cdef(GO:0032502, [and=results_in_complete_developmental_of(anon(corneal lens, anatomy))/unfolds_in(ZFA:0000107), OBO_REL:unfolds_in=cell:compound]) [-3] ! parse: GO:0048058 using "compound eye corneal lens development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(corneal lens, anatomy), OBO_REL:unfolds_in=FBbt:00004508]) [-14] ! no existing xp def ! def: "The process whose specific outcome is the progression of the corneal lens in the compound eye over time, from its formation to the mature structure. The corneal lens is a chitinous extracellular secretion of the four underlying cone cells and the pigment cells." ! PROPOSED: developmental process that and results_in_complete_developmental_of(anon(corneal lens, anatomy))/unfolds_in(ZFA:0000107) and OBO_REL:unfolds_in compound [cdef(GO:0032502, [and=results_in_complete_developmental_of(anon(corneal lens, anatomy))/unfolds_in(ZFA:0000107), OBO_REL:unfolds_in=cell:compound])] [Term] id: GO:0048058 ! compound eye corneal lens development intersection_of: GO:0032502 ! developmental process intersection_of: and results_in_complete_developmental_of(anon(corneal lens, anatomy))/unfolds_in(ZFA:0000107) intersection_of: OBO_REL:unfolds_in cell:compound ! compound ! seconds spent parsing GO:0048058: 22.79 ! No parse for: GO:0048067 cuticle pigmentation ! No parse for: GO:0048069 eye pigmentation ! parse: GO:0048072 using "compound eye pigmentation" => cdef(GO:0048069, [OBO_REL:results_in_developmental_progression_of=cell:compound]) [-2] ! no existing xp def ! def: "Establishment of a pattern of pigment in the compound eye." ! PROPOSED: eye pigmentation that OBO_REL:results_in_developmental_progression_of compound [cdef(GO:0048069, [OBO_REL:results_in_developmental_progression_of=cell:compound])] [Term] id: GO:0048072 ! compound eye pigmentation intersection_of: GO:0048069 ! eye pigmentation intersection_of: OBO_REL:results_in_developmental_progression_of cell:compound ! compound ! seconds spent parsing GO:0048072: 21.24 ! parse: GO:0048085 using "adult chitin-containing cuticle pigmentation" => cdef(GO:0048067, [OBO_REL:results_in_developmental_progression_of=anon(chitin-containing, anatomy), OBO_REL:unfolds_in=FBbt:00003004]) [-19] ! no existing xp def ! def: "Establishment of the adult pattern of pigmentation in the chitin-containing cuticle of an organism. As in, but not restricted to, the true insects (Insecta, ncbi_taxonomy_id:50557)." ! PROPOSED: cuticle pigmentation that OBO_REL:results_in_developmental_progression_of anon(chitin-containing, anatomy) and OBO_REL:unfolds_in adult [cdef(GO:0048067, [OBO_REL:results_in_developmental_progression_of=anon(chitin-containing, anatomy), OBO_REL:unfolds_in=FBbt:00003004])] [Term] id: GO:0048085 ! adult chitin-containing cuticle pigmentation intersection_of: GO:0048067 ! cuticle pigmentation intersection_of: OBO_REL:results_in_developmental_progression_of anatomy:chitin_-_containing intersection_of: OBO_REL:unfolds_in FBbt:00003004 ! adult synonym: "imago chitin-containing cuticle pigmentation" EXACT [OBOL:automatic] ! seconds spent parsing GO:0048085: 31.03 ! No parse for: GO:0048096 chromatin-mediated maintenance of transcription ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0048100 using "wing disc anterior/posterior pattern formation" => cdef(GO:0007389, [OBO_REL:results_in_developmental_progression_of=anon(anterior/posterior, anatomy), OBO_REL:unfolds_in=FBbt:00001778]) [-20] ! parse: GO:0048100 using "wing disc anterior/posterior pattern formation" => cdef(GO:0007389, [OBO_REL:results_in_developmental_progression_of=anon(disc anterior/posterior, anatomy), OBO_REL:unfolds_in=FBbt:00004729]) [-25] ! parse: GO:0048100 using "wing disc anterior/posterior pattern formation" => cdef(GO:0009952, [OBO_REL:results_in_developmental_progression_of=FBbt:00001778]) [-2] ! parse: GO:0048100 using "wing disc anterior/posterior pattern formation" => cdef(GO:0009952, [OBO_REL:results_in_developmental_progression_of=anon(disc, anatomy), OBO_REL:unfolds_in=FBbt:00004729]) [-6] ! parse: GO:0048100 using "wing disc anterior/posterior pattern formation" => cdef(GO:0009952, [OBO_REL:results_in_patterning_for=FBbt:00001778]) [-2] ! parse: GO:0048100 using "wing disc anterior/posterior pattern formation" => cdef(GO:0009952, [OBO_REL:unfolds_in=FBbt:00001778]) [-2] ! parse: GO:0048100 using "wing disc anterior/posterior pattern formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(anterior/posterior pattern, anatomy), OBO_REL:unfolds_in=FBbt:00001778]) [-28] ! parse: GO:0048100 using "wing disc anterior/posterior pattern formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(disc anterior/posterior pattern, anatomy), OBO_REL:unfolds_in=FBbt:00004729]) [-33] ! no existing xp def ! def: "The establishment, maintenance and elaboration of the anterior/posterior axis of the wing disc, a precursor to the wing." ! PROPOSED: anterior/posterior pattern formation that OBO_REL:unfolds_in dorsal mesothoracic disc [cdef(GO:0009952, [OBO_REL:unfolds_in=FBbt:00001778])] [Term] id: GO:0048100 ! wing disc anterior/posterior pattern formation intersection_of: GO:0009952 ! anterior/posterior pattern formation intersection_of: OBO_REL:unfolds_in FBbt:00001778 ! dorsal mesothoracic disc synonym: "dorsal mesothoracic disc anterior/posterior pattern formation" EXACT [OBOL:automatic] ! seconds spent parsing GO:0048100: 6.6 ! Already have xp for: GO:0048103 somatic stem cell division ! CURRENT : cell division that OBO_REL:results_in_division_of somatic stem cell [cdef(GO:0051301, [OBO_REL:results_in_division_of=CL:0000723])] ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0048134 using "germ-line cyst formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(cyst, anatomy), OBO_REL:unfolds_in=cell:germ_-_line]) [-6] ! no existing xp def ! def: "Formation of a cluster of germ-line cells derived from a single founder cell." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of anon(cyst, anatomy) and OBO_REL:unfolds_in germ-line [cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(cyst, anatomy), OBO_REL:unfolds_in=cell:germ_-_line])] [Term] id: GO:0048134 ! germ-line cyst formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of anatomy:cyst intersection_of: OBO_REL:unfolds_in cell:germ_-_line ! germ-line synonym: "germ-line cyst anatomical structure formation" EXACT [OBOL:automatic] synonym: "germ-line cyst formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0048134: 0.1 ! Already have xp for: GO:0048137 spermatocyte division ! CURRENT : cell division that OBO_REL:results_in_division_of spermatocyte [cdef(GO:0051301, [OBO_REL:results_in_division_of=CL:0000017])] ! No parse for: GO:0048138 germ-line cyst encapsulation ! Already have xp for: GO:0048142 germarium-derived cystoblast division ! CURRENT : cystoblast division that OBO_REL:results_in_division_of germarium-derived [cdef(GO:0007282, [OBO_REL:results_in_division_of=cell:germarium_-_derived])] ! Already have xp for: GO:0048143 astrocyte activation ! CURRENT : cell activation that OBO_REL:results_in_change_to astrocyte [cdef(GO:0001775, [OBO_REL:results_in_change_to=CL:0000127])] ! Already have xp for: GO:0048144 fibroblast proliferation ! CURRENT : cell proliferation that OBO_REL:increases_population_size_of fibroblast [cdef(GO:0008283, [OBO_REL:increases_population_size_of=CL:0000057])] ! Already have xp for: GO:0048175 hepatocyte growth factor biosynthetic process ! CURRENT : biosynthetic process that OBO_REL:results_in_creation_of HGF [cdef(GO:0009058, [OBO_REL:results_in_creation_of=cell:HGF])] ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0048190 using "wing disc dorsal/ventral pattern formation" => cdef(GO:0007389, [OBO_REL:results_in_developmental_progression_of=anon(disc dorsal/ventral, anatomy), OBO_REL:unfolds_in=FBbt:00004729]) [-21] ! parse: GO:0048190 using "wing disc dorsal/ventral pattern formation" => cdef(GO:0007389, [OBO_REL:results_in_developmental_progression_of=anon(dorsal/ventral, anatomy), OBO_REL:unfolds_in=FBbt:00001778]) [-16] ! parse: GO:0048190 using "wing disc dorsal/ventral pattern formation" => cdef(GO:0009953, [OBO_REL:results_in_developmental_progression_of=FBbt:00001778]) [-2] ! parse: GO:0048190 using "wing disc dorsal/ventral pattern formation" => cdef(GO:0009953, [OBO_REL:results_in_developmental_progression_of=anon(disc, anatomy), OBO_REL:unfolds_in=FBbt:00004729]) [-6] ! parse: GO:0048190 using "wing disc dorsal/ventral pattern formation" => cdef(GO:0009953, [OBO_REL:results_in_patterning_for=FBbt:00001778]) [-2] ! parse: GO:0048190 using "wing disc dorsal/ventral pattern formation" => cdef(GO:0009953, [OBO_REL:unfolds_in=FBbt:00001778]) [-2] ! parse: GO:0048190 using "wing disc dorsal/ventral pattern formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(disc dorsal/ventral pattern, anatomy), OBO_REL:unfolds_in=FBbt:00004729]) [-29] ! parse: GO:0048190 using "wing disc dorsal/ventral pattern formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(dorsal/ventral pattern, anatomy), OBO_REL:unfolds_in=FBbt:00001778]) [-24] ! no existing xp def ! def: "The establishment, maintenance and elaboration of the dorsal/ventral axis of the wing disc, a precursor to the adult wing." ! PROPOSED: dorsal/ventral pattern formation that OBO_REL:unfolds_in dorsal mesothoracic disc [cdef(GO:0009953, [OBO_REL:unfolds_in=FBbt:00001778])] [Term] id: GO:0048190 ! wing disc dorsal/ventral pattern formation intersection_of: GO:0009953 ! dorsal/ventral pattern formation intersection_of: OBO_REL:unfolds_in FBbt:00001778 ! dorsal mesothoracic disc synonym: "dorsal mesothoracic disc dorsal/ventral pattern formation" EXACT [OBOL:automatic] ! seconds spent parsing GO:0048190: 15.95 ! parse: GO:0048193 using "Golgi vesicle transport" => cdef(GO:0006810, [OBO_REL:results_in_transport_of=GO:0005798]) [-2] ! parse: GO:0048193 using "Golgi vesicle transport" => cdef(GO:0006810, [OBO_REL:results_in_transport_of=GO:0031982, OBO_REL:unfolds_in=GO:0005794]) [-3] ! parse: GO:0048193 using "Golgi vesicle transport" => cdef(GO:0006810, [OBO_REL:results_in_transport_of=cdef(GO:0031982, [OBO_REL:part_of=GO:0005794])]) [-3] ! parse: GO:0048193 using "Golgi vesicle transport" => cdef(GO:0016192, [OBO_REL:results_in_transport_of=GO:0005794]) [-2] ! parse: GO:0048193 using "Golgi-derived vesicle transport" => cdef(GO:0006810, [OBO_REL:results_in_transport_of=cdef(GO:0005794, [OBO_REL:derives_from=GO:0031982])]) [-3] ! no existing xp def ! def: "The directed movement of substances into, out of or within the Golgi apparatus, mediated by vesicles." ! PROPOSED: vesicle-mediated transport that OBO_REL:results_in_transport_of Golgi apparatus [cdef(GO:0016192, [OBO_REL:results_in_transport_of=GO:0005794])] [Term] id: GO:0048193 ! Golgi vesicle transport intersection_of: GO:0016192 ! vesicle-mediated transport intersection_of: OBO_REL:results_in_transport_of GO:0005794 ! Golgi apparatus synonym: "Golgi apparatus ARF small monomeric GTPase activity" EXACT [OBOL:automatic] synonym: "Golgi apparatus RAB small monomeric GTPase activity" EXACT [OBOL:automatic] synonym: "Golgi apparatus synaptic vesicle fission" EXACT [OBOL:automatic] synonym: "Golgi apparatus synaptic vesicle fusion" EXACT [OBOL:automatic] synonym: "Golgi apparatus synaptic vesicle internalization" EXACT [OBOL:automatic] synonym: "Golgi apparatus synaptic vesicle retrieval" EXACT [OBOL:automatic] synonym: "Golgi apparatus vesicle fusion" EXACT [OBOL:automatic] synonym: "Golgi apparatus vesicle trafficking" EXACT [OBOL:automatic] synonym: "Golgi apparatus vesicle transport" EXACT [OBOL:automatic] synonym: "Golgi apparatus vesicle-fusing ATPase activity" EXACT [OBOL:automatic] synonym: "Golgi apparatus vesicle-mediated transport" EXACT [OBOL:automatic] synonym: "Golgi complex ARF small monomeric GTPase activity" EXACT [OBOL:automatic] synonym: "Golgi complex RAB small monomeric GTPase activity" EXACT [OBOL:automatic] synonym: "Golgi complex synaptic vesicle fission" EXACT [OBOL:automatic] synonym: "Golgi complex synaptic vesicle fusion" EXACT [OBOL:automatic] synonym: "Golgi complex synaptic vesicle internalization" EXACT [OBOL:automatic] synonym: "Golgi complex synaptic vesicle retrieval" EXACT [OBOL:automatic] synonym: "Golgi complex vesicle fusion" EXACT [OBOL:automatic] synonym: "Golgi complex vesicle trafficking" EXACT [OBOL:automatic] synonym: "Golgi complex vesicle transport" EXACT [OBOL:automatic] synonym: "Golgi complex vesicle-fusing ATPase activity" EXACT [OBOL:automatic] synonym: "Golgi complex vesicle-mediated transport" EXACT [OBOL:automatic] synonym: "Golgi vesicle-mediated transport" EXACT [OBOL:automatic] ! seconds spent parsing GO:0048193: 26.71 ! No parse for: GO:0048194 Golgi vesicle budding ! No parse for: GO:0048195 Golgi membrane priming complex assembly ! parse: GO:0048197 using "Golgi membrane coat protein complex assembly" => cdef(GO:0006461, [OBO_REL:results_in_creation_of=GO:0030117, OBO_REL:unfolds_in=GO:0005794]) [-3] ! parse: GO:0048197 using "Golgi membrane coat protein complex assembly" => cdef(GO:0006461, [OBO_REL:results_in_creation_of=cdef(GO:0030117, [OBO_REL:part_of=GO:0005794])]) [-3] ! parse: GO:0048197 using "Golgi membrane coat protein complex assembly" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0043234, OBO_REL:unfolds_in=cdef(GO:0030117, [OBO_REL:part_of=GO:0005794])]) [-4] ! parse: GO:0048197 using "Golgi membrane coat protein complex assembly" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=cdef(GO:0043234, [OBO_REL:part_of=GO:0030117]), OBO_REL:unfolds_in=GO:0005794]) [-4] ! parse: GO:0048197 using "Golgi membrane coat protein complex assembly" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=cdef(cdef(GO:0043234, [OBO_REL:part_of=GO:0030117]), [OBO_REL:part_of=GO:0005794])]) [-4] ! parse: GO:0048197 using "Golgi membrane coat protein complex assembly" => cdef(GO:0022607, [and=results_in_creation_of(GO:0043234)/unfolds_in(GO:0030117), OBO_REL:unfolds_in=GO:0005794]) [-3] ! no existing xp def ! def: "The aggregation and bonding together of priming complexes to form a coat on a Golgi membrane. Priming complexes associate laterally and additional coat proteins are recruited from the cytosol to the forming coat. Cargo proteins diffuse into the budding site and become trapped by their interactions with the coat." ! PROPOSED: cellular component assembly that and results_in_creation_of(GO:0043234)/unfolds_in(GO:0030117) and OBO_REL:unfolds_in Golgi apparatus [cdef(GO:0022607, [and=results_in_creation_of(GO:0043234)/unfolds_in(GO:0030117), OBO_REL:unfolds_in=GO:0005794])] [Term] id: GO:0048197 ! Golgi membrane coat protein complex assembly intersection_of: GO:0022607 ! cellular component assembly intersection_of: and results_in_creation_of(GO:0043234)/unfolds_in(GO:0030117) intersection_of: OBO_REL:unfolds_in GO:0005794 ! Golgi apparatus ! seconds spent parsing GO:0048197: 27.01 ! No parse for: GO:0048198 Golgi vesicle bud deformation and release ! No parse for: GO:0048199 vesicle targeting, to, from or within Golgi ! No parse for: GO:0048200 Golgi transport vesicle coating ! No parse for: GO:0048201 vesicle targeting, plasma membrane to endosome ! No parse for: GO:0048202 clathrin coating of Golgi vesicle ! No parse for: GO:0048203 vesicle targeting, trans-Golgi to endosome ! No parse for: GO:0048204 vesicle targeting, inter-Golgi cisterna ! No parse for: GO:0048206 vesicle targeting, cis-Golgi to rough ER ! No parse for: GO:0048207 vesicle targeting, rough ER to cis-Golgi ! No parse for: GO:0048210 Golgi vesicle fusion to target membrane ! No parse for: GO:0048211 Golgi vesicle docking ! No parse for: GO:0048212 Golgi vesicle uncoating ! No parse for: GO:0048213 Golgi vesicle prefusion complex stabilization ! No parse for: GO:0048221 rough ER to cis-Golgi vesicle-mediated transport ! parse: GO:0048227 using "plasma membrane to endosome transport" => cdef(GO:0006810, [OBO_REL:results_in_transport_from=GO:0005886, OBO_REL:results_in_transport_to=GO:0005768]) [-3] ! parse: GO:0048227 using "plasma membrane to endosome transport" => cdef(GO:0006810, [and=results_in_transport_from(GO:0016020)/results_in_transport_to(GO:0005768), OBO_REL:unfolds_in=MA:0002501]) [-3] ! parse: GO:0048227 using "plasma membrane to endosome transport" => cdef(GO:0006810, [and=results_in_transport_of(GO:0005768)/unfolds_in(FBbt:00002690), OBO_REL:unfolds_in=GO:0005886]) [-3] ! parse: GO:0048227 using "plasma membrane to endosome transport" => cdef(GO:0006810, [and=and(results_in_transport_of(GO:0005768), unfolds_in(FBbt:00002690))/unfolds_in(GO:0016020), OBO_REL:unfolds_in=MA:0002501]) [-3] ! parse: GO:0048227 using "plasma membrane to endosome transport" => cdef(GO:0016197, [OBO_REL:results_in_transport_of=FBbt:00002690, OBO_REL:unfolds_in=GO:0005886]) [-3] ! parse: GO:0048227 using "plasma membrane to endosome transport" => cdef(GO:0016197, [and=results_in_transport_of(FBbt:00002690)/unfolds_in(GO:0016020), OBO_REL:unfolds_in=MA:0002501]) [-3] ! no existing xp def ! def: "Transport of a vesicle from the plasma membrane to the endosome." ! PROPOSED: endosome transport that and results_in_transport_of(FBbt:00002690)/unfolds_in(GO:0016020) and OBO_REL:unfolds_in plasma [cdef(GO:0016197, [and=results_in_transport_of(FBbt:00002690)/unfolds_in(GO:0016020), OBO_REL:unfolds_in=MA:0002501])] [Term] id: GO:0048227 ! plasma membrane to endosome transport intersection_of: GO:0016197 ! endosome transport intersection_of: and results_in_transport_of(FBbt:00002690)/unfolds_in(GO:0016020) intersection_of: OBO_REL:unfolds_in MA:0002501 ! plasma ! seconds spent parsing GO:0048227: 13.63 ! No parse for: GO:0048228 actin cortical patch distribution ! Already have xp for: GO:0048229 gametophyte development ! CURRENT : developmental process that OBO_REL:results_in_developmental_progression_of gametophyte [cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=cell:gametophyte])] ! Already have xp for: GO:0048235 pollen sperm cell differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of pollen sperm [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=cell:pollen_sperm])] ! No parse for: GO:0048240 sperm capacitation ! Already have xp for: GO:0048246 macrophage chemotaxis ! CURRENT : chemotaxis that OBO_REL:results_in_movement_of macrophage [cdef(GO:0006935, [OBO_REL:results_in_movement_of=CL:0000235])] ! Already have xp for: GO:0048247 lymphocyte chemotaxis ! CURRENT : chemotaxis that OBO_REL:results_in_movement_of lymphocyte [cdef(GO:0006935, [OBO_REL:results_in_movement_of=CL:0000542])] ! No parse for: GO:0048254 snoRNA localization ! parse: GO:0048268 using "clathrin cage assembly" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0030118]) [-2] ! parse: GO:0048268 using "clathrin coat assembly" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0030118]) [-2] ! no existing xp def ! def: "Assembly of clathrin triskelia into clathrin cage." ! PROPOSED: cellular component assembly that OBO_REL:results_in_creation_of clathrin coat [cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0030118])] [Term] id: GO:0048268 ! clathrin cage assembly intersection_of: GO:0022607 ! cellular component assembly intersection_of: OBO_REL:results_in_creation_of GO:0030118 ! clathrin coat synonym: "assembly and maintenance of clathrin cage" EXACT [OBOL:automatic] synonym: "assembly and maintenance of clathrin coat" EXACT [OBOL:automatic] synonym: "assembly of clathrin cage" EXACT [OBOL:automatic] synonym: "assembly of clathrin coat" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of clathrin cage" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of clathrin coat" EXACT [OBOL:automatic] synonym: "biogenesis of clathrin cage" EXACT [OBOL:automatic] synonym: "biogenesis of clathrin coat" EXACT [OBOL:automatic] synonym: "cell structure assembly of clathrin cage" EXACT [OBOL:automatic] synonym: "cell structure assembly of clathrin coat" EXACT [OBOL:automatic] synonym: "cellular component assembly of clathrin cage" EXACT [OBOL:automatic] synonym: "cellular component assembly of clathrin coat" EXACT [OBOL:automatic] synonym: "clathrin cage assembly and maintenance" EXACT [OBOL:automatic] synonym: "clathrin cage biogenesis" EXACT [OBOL:automatic] synonym: "clathrin cage biogenesis and assembly" EXACT [OBOL:automatic] synonym: "clathrin cage cell structure assembly" EXACT [OBOL:automatic] synonym: "clathrin cage cellular component assembly" EXACT [OBOL:automatic] synonym: "clathrin cage complex assembly" EXACT [OBOL:automatic] synonym: "clathrin cage formation" EXACT [OBOL:automatic] synonym: "clathrin coat assembly and maintenance" EXACT [OBOL:automatic] synonym: "clathrin coat biogenesis" EXACT [OBOL:automatic] synonym: "clathrin coat biogenesis and assembly" EXACT [OBOL:automatic] synonym: "clathrin coat cell structure assembly" EXACT [OBOL:automatic] synonym: "clathrin coat cellular component assembly" EXACT [OBOL:automatic] synonym: "clathrin coat complex assembly" EXACT [OBOL:automatic] synonym: "clathrin coat formation" EXACT [OBOL:automatic] synonym: "complex assembly of clathrin cage" EXACT [OBOL:automatic] synonym: "complex assembly of clathrin coat" EXACT [OBOL:automatic] synonym: "formation of clathrin cage" EXACT [OBOL:automatic] synonym: "formation of clathrin coat" EXACT [OBOL:automatic] def: "The aggregation and bonding together of a set of macromolecules to form a clathrin cage" [OBOL:automatic] ! seconds spent parsing GO:0048268: 11.35 ! No parse for: GO:0048278 vesicle docking ! No parse for: GO:0048279 vesicle fusion with endoplasmic reticulum ! No parse for: GO:0048280 vesicle fusion with Golgi apparatus ! parse: GO:0048281 using "inflorescence morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=PO:0009049]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of inflorescences are generated and organized. Morphogenesis pertains to the creation of form. An inflorescence is the part of a seed plant body that is usually above ground and that can bear flowers." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of inflorescence [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=PO:0009049])] [Term] id: GO:0048281 ! inflorescence morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of PO:0009049 ! inflorescence ! seconds spent parsing GO:0048281: 5.21 ! No parse for: GO:0048284 organelle fusion ! parse: GO:0048285 using "organelle fission" => cdef(GO:0009987, [OBO_REL:results_in_division_of=GO:0043226]) [-2] ! no existing xp def ! def: "The creation of two or more organelles by division of one organelle." ! PROPOSED: cellular process that OBO_REL:results_in_division_of organelle [cdef(GO:0009987, [OBO_REL:results_in_division_of=GO:0043226])] [Term] id: GO:0048285 ! organelle fission intersection_of: GO:0009987 ! cellular process intersection_of: OBO_REL:results_in_division_of GO:0043226 ! organelle synonym: "organellar fission" EXACT [OBOL:automatic] def: "The creation of two or more GO:0043226 s by division of one GO:0043226" [OBOL:automatic] ! seconds spent parsing GO:0048285: 5.62 ! Already have xp for: GO:0048288 nuclear membrane fusion during karyogamy ! CURRENT : nuclear membrane fusion that OBO_REL:part_of karyogamy [cdef(GO:0000740, [OBO_REL:part_of=GO:0000741])] ! No parse for: GO:0048305 immunoglobulin secretion ! No parse for: GO:0048308 organelle inheritance ! No parse for: GO:0048309 endoplasmic reticulum inheritance ! No parse for: GO:0048310 nucleus inheritance ! No parse for: GO:0048311 mitochondrion distribution ! parse: GO:0048312 using "intracellular distribution of mitochondria" => cdef(GO:0048311, [OBO_REL:results_in_localization_of=GO:0005622]) [-2] ! no existing xp def ! def: "The processes that establish the spatial arrangement of mitochondria within the cell." ! PROPOSED: mitochondrion distribution that OBO_REL:results_in_localization_of intracellular [cdef(GO:0048311, [OBO_REL:results_in_localization_of=GO:0005622])] [Term] id: GO:0048312 ! intracellular distribution of mitochondria intersection_of: GO:0048311 ! mitochondrion distribution intersection_of: OBO_REL:results_in_localization_of GO:0005622 ! intracellular synonym: "protoplasm distribution of mitochondria" EXACT [OBOL:automatic] synonym: "protoplasm mitochondrial distribution" EXACT [OBOL:automatic] synonym: "protoplasm mitochondrion distribution" EXACT [OBOL:automatic] synonym: "protoplasm positioning of mitochondria" EXACT [OBOL:automatic] ! seconds spent parsing GO:0048312: 23.82 ! No parse for: GO:0048313 Golgi inheritance ! Already have xp for: GO:0048314 embryo sac morphogenesis ! CURRENT : anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of embryo sac [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=cell:embryo_sac])] ! No relation defined: results_in_complete_developmental_of ! parse: GO:0048316 using "seed development" => cdef(GO:0032502, [results_in_complete_developmental_of=PO:0009010]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the seed over time, from its formation to the mature structure. A seed is a propagating organ formed in the sexual reproductive cycle of gymnosperms and angiosperms, consisting of a protective coat enclosing an embryo and food reserves." ! PROPOSED: developmental process that results_in_complete_developmental_of seed [cdef(GO:0032502, [results_in_complete_developmental_of=PO:0009010])] [Term] id: GO:0048316 ! seed development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of PO:0009010 ! seed ! seconds spent parsing GO:0048316: 5.1 ! parse: GO:0048317 using "seed morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=PO:0009010]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of the seed are generated and organized. Morphogenesis pertains to the creation of form." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of seed [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=PO:0009010])] [Term] id: GO:0048317 ! seed morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of PO:0009010 ! seed ! seconds spent parsing GO:0048317: 5.61 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0048318 using "axial mesoderm development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0001204]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the axial mesoderm over time, from its formation to the mature structure. The axial mesoderm includes the prechordal mesoderm and the chordamesoderm. It gives rise to the prechordal plate and to the notochord." ! PROPOSED: developmental process that results_in_complete_developmental_of axial mesoderm [cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0001204])] [Term] id: GO:0048318 ! axial mesoderm development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of ZFA:0001204 ! axial mesoderm ! seconds spent parsing GO:0048318: 5.29 ! parse: GO:0048319 using "axial mesoderm morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0001204]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of the axial mesoderm are generated and organized. Morphogenesis pertains to the creation of form." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of axial mesoderm [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0001204])] [Term] id: GO:0048319 ! axial mesoderm morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0001204 ! axial mesoderm ! seconds spent parsing GO:0048319: 5.74 ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0048320 using "axial mesoderm formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=ZFA:0001204]) [-2] ! parse: GO:0048320 using "axial mesoderm formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0001204]) [-2] ! no existing xp def ! def: "The process that gives rise to the axial mesoderm. This process pertains to the initial formation of the structure from unspecified parts." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of axial mesoderm [cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0001204])] [Term] id: GO:0048320 ! axial mesoderm formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of ZFA:0001204 ! axial mesoderm ! seconds spent parsing GO:0048320: 5.83 ! parse: GO:0048321 using "axial mesoderm cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000000, OBO_REL:unfolds_in=ZFA:0001204]) [-3] ! parse: GO:0048321 using "axial mesoderm cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(axial mesoderm, cell)]) [-15] ! parse: GO:0048321 using "axial mesoderm cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(axial mesoderm cell, cell)]) [-20] ! parse: GO:0048321 using "axial mesoderm cell differentiation" => cdef(GO:0048333, [OBO_REL:results_in_acquisition_of_features_of=anon(axial, cell)]) [-6] ! parse: GO:0048321 using "axial mesodermal cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(axial mesodermal, cell)]) [-17] ! parse: GO:0048321 using "axial mesodermal cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(axial mesodermal cell, cell)]) [-22] ! parse: GO:0048321 using "axial mesodermal cell differentiation" => cdef(GO:0048333, [OBO_REL:results_in_acquisition_of_features_of=anon(axial, cell)]) [-6] ! parse: GO:0048321 using "axial mesodermal cell differentiation" => cdef(GO:0048333, [OBO_REL:results_in_developmental_progression_of=anon(axial, anatomy)]) [-6] ! no existing xp def ! def: "The process whereby a relatively unspecialized cell acquires specialized features of an axial mesoderm cell." ! PROPOSED: cell differentiation that OBO_REL:results_in_acquisition_of_features_of cell and OBO_REL:unfolds_in axial mesoderm [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000000, OBO_REL:unfolds_in=ZFA:0001204])] [Term] id: GO:0048321 ! axial mesodermal cell differentiation intersection_of: GO:0030154 ! cell differentiation intersection_of: OBO_REL:results_in_acquisition_of_features_of CL:0000000 ! cell intersection_of: OBO_REL:unfolds_in ZFA:0001204 ! axial mesoderm ! seconds spent parsing GO:0048321: 14.81 ! parse: GO:0048322 using "axial mesoderm cell fate commitment" => cdef(GO:0045165, [OBO_REL:results_in_commitment_to=CL:0000000, OBO_REL:unfolds_in=ZFA:0001204]) [-3] ! no existing xp def ! def: "The process by which a cell becomes committed to become an axial mesoderm cell." ! PROPOSED: cell fate commitment that OBO_REL:results_in_commitment_to cell and OBO_REL:unfolds_in axial mesoderm [cdef(GO:0045165, [OBO_REL:results_in_commitment_to=CL:0000000, OBO_REL:unfolds_in=ZFA:0001204])] [Term] id: GO:0048322 ! axial mesodermal cell fate commitment intersection_of: GO:0045165 ! cell fate commitment intersection_of: OBO_REL:results_in_commitment_to CL:0000000 ! cell intersection_of: OBO_REL:unfolds_in ZFA:0001204 ! axial mesoderm ! seconds spent parsing GO:0048322: 14.35 ! parse: GO:0048323 using "axial mesoderm cell fate determination" => cdef(GO:0001709, [OBO_REL:results_in_determination_to=CL:0000000, OBO_REL:unfolds_in=ZFA:0001204]) [-3] ! no existing xp def ! def: "Process by which a cell becomes capable of differentiating autonomously into an axial mesoderm cell regardless of its environment; upon determination, the cell fate cannot be reversed." ! PROPOSED: cell fate determination that OBO_REL:results_in_determination_to cell and OBO_REL:unfolds_in axial mesoderm [cdef(GO:0001709, [OBO_REL:results_in_determination_to=CL:0000000, OBO_REL:unfolds_in=ZFA:0001204])] [Term] id: GO:0048323 ! axial mesodermal cell fate determination intersection_of: GO:0001709 ! cell fate determination intersection_of: OBO_REL:results_in_determination_to CL:0000000 ! cell intersection_of: OBO_REL:unfolds_in ZFA:0001204 ! axial mesoderm ! seconds spent parsing GO:0048323: 13.48 ! parse: GO:0048327 using "axial mesoderm cell fate specification" => cdef(GO:0001708, [OBO_REL:results_in_specification_of=CL:0000000, OBO_REL:unfolds_in=ZFA:0001204]) [-3] ! no existing xp def ! def: "Process by which a cell becomes capable of differentiating autonomously into an axial mesoderm cell in an environment that is neutral with respect to the developmental pathway; upon specification, the cell fate can be reversed." ! PROPOSED: cell fate specification that OBO_REL:results_in_specification_of cell and OBO_REL:unfolds_in axial mesoderm [cdef(GO:0001708, [OBO_REL:results_in_specification_of=CL:0000000, OBO_REL:unfolds_in=ZFA:0001204])] [Term] id: GO:0048327 ! axial mesodermal cell fate specification intersection_of: GO:0001708 ! cell fate specification intersection_of: OBO_REL:results_in_specification_of CL:0000000 ! cell intersection_of: OBO_REL:unfolds_in ZFA:0001204 ! axial mesoderm ! seconds spent parsing GO:0048327: 13.34 ! parse: GO:0048331 using "axial mesoderm structural organization" => cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=ZFA:0001204]) [-2] ! no existing xp def ! def: "The process that contributes to the act of creating the structural organization of the axial mesoderm. This process pertains to the physical shaping of a rudimentary structure." ! PROPOSED: organization of an anatomical structure that OBO_REL:results_in_developmental_progression_of axial mesoderm [cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=ZFA:0001204])] [Term] id: GO:0048331 ! axial mesoderm structural organization intersection_of: GO:0048532 ! organization of an anatomical structure intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0001204 ! axial mesoderm ! seconds spent parsing GO:0048331: 14.1 ! parse: GO:0048332 using "mesoderm morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00000126]) [-2] ! parse: GO:0048332 using "mesoderm morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0000041]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of the mesoderm are generated and organized. Morphogenesis pertains to the creation of form." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of mesoderm [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0000041])] [Term] id: GO:0048332 ! mesoderm morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0000041 ! mesoderm ! seconds spent parsing GO:0048332: 6.26 ! Already have xp for: GO:0048333 mesodermal cell differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of mesodermal cell [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000222])] ! parse: GO:0048338 using "mesoderm structural organization" => cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=FBbt:00000126]) [-2] ! parse: GO:0048338 using "mesoderm structural organization" => cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=ZFA:0000041]) [-2] ! no existing xp def ! def: "The process that contributes to the act of creating the structural organization of the mesoderm. This process pertains to the physical shaping of a rudimentary structure." ! PROPOSED: organization of an anatomical structure that OBO_REL:results_in_developmental_progression_of mesoderm [cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=ZFA:0000041])] [Term] id: GO:0048338 ! mesoderm structural organization intersection_of: GO:0048532 ! organization of an anatomical structure intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0000041 ! mesoderm ! seconds spent parsing GO:0048338: 11.69 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0048339 using "paraxial mesoderm development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000255]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the paraxial mesoderm over time, from its formation to the mature structure. The paraxial mesoderm is the mesoderm located bilaterally adjacent to the notochord and neural tube." ! PROPOSED: developmental process that results_in_complete_developmental_of paraxial mesoderm [cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000255])] [Term] id: GO:0048339 ! paraxial mesoderm development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of ZFA:0000255 ! paraxial mesoderm ! seconds spent parsing GO:0048339: 4.89 ! parse: GO:0048340 using "paraxial mesoderm morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0000255]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of the paraxial mesoderm are generated and organized. Morphogenesis pertains to the creation of form." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of paraxial mesoderm [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0000255])] [Term] id: GO:0048340 ! paraxial mesoderm morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0000255 ! paraxial mesoderm ! seconds spent parsing GO:0048340: 5.31 ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0048341 using "paraxial mesoderm formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=ZFA:0000255]) [-2] ! parse: GO:0048341 using "paraxial mesoderm formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0000255]) [-2] ! no existing xp def ! def: "The process that gives rise to the paraxial mesoderm. This process pertains to the initial formation of the structure from unspecified parts." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of paraxial mesoderm [cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0000255])] [Term] id: GO:0048341 ! paraxial mesoderm formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of ZFA:0000255 ! paraxial mesoderm ! seconds spent parsing GO:0048341: 5.35 ! parse: GO:0048342 using "paraxial mesodermal cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(paraxial mesodermal, cell)]) [-20] ! parse: GO:0048342 using "paraxial mesodermal cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(paraxial mesodermal cell, cell)]) [-25] ! parse: GO:0048342 using "paraxial mesodermal cell differentiation" => cdef(GO:0048333, [OBO_REL:results_in_acquisition_of_features_of=anon(paraxial, cell)]) [-9] ! parse: GO:0048342 using "paraxial mesodermal cell differentiation" => cdef(GO:0048333, [OBO_REL:results_in_developmental_progression_of=anon(paraxial, anatomy)]) [-9] ! no existing xp def ! def: "The process whereby a relatively unspecialized cell acquires the specialized features of a paraxial mesoderm cell." ! PROPOSED: mesodermal cell differentiation that OBO_REL:results_in_developmental_progression_of anon(paraxial, anatomy) [cdef(GO:0048333, [OBO_REL:results_in_developmental_progression_of=anon(paraxial, anatomy)])] [Term] id: GO:0048342 ! paraxial mesodermal cell differentiation intersection_of: GO:0048333 ! mesodermal cell differentiation intersection_of: OBO_REL:results_in_developmental_progression_of anatomy:paraxial synonym: "paraxial mesoblast cell differentiation" EXACT [OBOL:automatic] synonym: "paraxial mesoblast differentiation" EXACT [OBOL:automatic] synonym: "paraxial mesoderm cell cell differentiation" EXACT [OBOL:automatic] synonym: "paraxial mesoderm cell differentiation" EXACT [OBOL:automatic] synonym: "paraxial mesodermal cell cell differentiation" EXACT [OBOL:automatic] ! seconds spent parsing GO:0048342: 5.29 ! No parse for: GO:0048343 paraxial mesodermal cell fate commitment ! No parse for: GO:0048344 paraxial mesodermal cell fate determination ! No parse for: GO:0048348 paraxial mesodermal cell fate specification ! parse: GO:0048352 using "paraxial mesoderm structural organization" => cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=ZFA:0000255]) [-2] ! no existing xp def ! def: "The process that contributes to the act of creating the structural organization of the paraxial mesoderm. This process pertains to the physical shaping of a rudimentary structure." ! PROPOSED: organization of an anatomical structure that OBO_REL:results_in_developmental_progression_of paraxial mesoderm [cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=ZFA:0000255])] [Term] id: GO:0048352 ! paraxial mesoderm structural organization intersection_of: GO:0048532 ! organization of an anatomical structure intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0000255 ! paraxial mesoderm ! seconds spent parsing GO:0048352: 10.21 ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0048355 using "root cap mucilage anabolism" => cdef(GO:0010192, [OBO_REL:results_in_creation_of=PO:0020123]) [-2] ! parse: GO:0048355 using "root cap mucilage biosynthesis" => cdef(GO:0010192, [OBO_REL:results_in_creation_of=PO:0020123]) [-2] ! parse: GO:0048355 using "root cap mucilage biosynthetic process" => cdef(GO:0010192, [OBO_REL:results_in_creation_of=PO:0020123]) [-2] ! parse: GO:0048355 using "root cap mucilage formation" => cdef(GO:0010192, [OBO_REL:results_in_creation_of=PO:0020123]) [-2] ! parse: GO:0048355 using "root cap mucilage formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(cap mucilage, anatomy), OBO_REL:unfolds_in=PO:0009005]) [-14] ! parse: GO:0048355 using "root cap mucilage formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(mucilage, anatomy), OBO_REL:unfolds_in=PO:0020123]) [-10] ! parse: GO:0048355 using "root cap mucilage synthesis" => cdef(GO:0010192, [OBO_REL:results_in_creation_of=PO:0020123]) [-2] ! no existing xp def ! def: "The chemical reactions and pathways resulting in the formation of mucilage that occur in the root cap; mucilage is normally synthesized during root growth." ! PROPOSED: mucilage biosynthetic process that OBO_REL:results_in_creation_of root cap [cdef(GO:0010192, [OBO_REL:results_in_creation_of=PO:0020123])] [Term] id: GO:0048355 ! root cap mucilage biosynthetic process intersection_of: GO:0010192 ! mucilage biosynthetic process intersection_of: OBO_REL:results_in_creation_of PO:0020123 ! root cap ! seconds spent parsing GO:0048355: 71.9 ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0048356 using "root epithelial mucilage formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(epithelial mucilage, anatomy), OBO_REL:unfolds_in=PO:0009005]) [-21] ! no existing xp def ! def: "The chemical reactions and pathways resulting in the formation of mucilage that occur in the root epithelium; mucilage is normally synthesized during root growth." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of anon(epithelial mucilage, anatomy) and OBO_REL:unfolds_in root [cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(epithelial mucilage, anatomy), OBO_REL:unfolds_in=PO:0009005])] [Term] id: GO:0048356 ! root epithelial mucilage biosynthetic process intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of anatomy:epithelial_mucilage intersection_of: OBO_REL:unfolds_in PO:0009005 ! root ! seconds spent parsing GO:0048356: 45.36 ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0048357 using "pedicel mucilage anabolism" => cdef(GO:0010192, [OBO_REL:results_in_creation_of=FBbt:00004514]) [-2] ! parse: GO:0048357 using "pedicel mucilage anabolism" => cdef(GO:0010192, [OBO_REL:results_in_creation_of=FBbt:00004920]) [-2] ! parse: GO:0048357 using "pedicel mucilage anabolism" => cdef(GO:0010192, [OBO_REL:results_in_creation_of=PO:0009052]) [-2] ! parse: GO:0048357 using "pedicel mucilage biosynthesis" => cdef(GO:0010192, [OBO_REL:results_in_creation_of=FBbt:00004514]) [-2] ! parse: GO:0048357 using "pedicel mucilage biosynthesis" => cdef(GO:0010192, [OBO_REL:results_in_creation_of=FBbt:00004920]) [-2] ! parse: GO:0048357 using "pedicel mucilage biosynthesis" => cdef(GO:0010192, [OBO_REL:results_in_creation_of=PO:0009052]) [-2] ! parse: GO:0048357 using "pedicel mucilage biosynthetic process" => cdef(GO:0010192, [OBO_REL:results_in_creation_of=FBbt:00004514]) [-2] ! parse: GO:0048357 using "pedicel mucilage biosynthetic process" => cdef(GO:0010192, [OBO_REL:results_in_creation_of=FBbt:00004920]) [-2] ! parse: GO:0048357 using "pedicel mucilage biosynthetic process" => cdef(GO:0010192, [OBO_REL:results_in_creation_of=PO:0009052]) [-2] ! parse: GO:0048357 using "pedicel mucilage formation" => cdef(GO:0010192, [OBO_REL:results_in_creation_of=FBbt:00004514]) [-2] ! parse: GO:0048357 using "pedicel mucilage formation" => cdef(GO:0010192, [OBO_REL:results_in_creation_of=FBbt:00004920]) [-2] ! parse: GO:0048357 using "pedicel mucilage formation" => cdef(GO:0010192, [OBO_REL:results_in_creation_of=PO:0009052]) [-2] ! parse: GO:0048357 using "pedicel mucilage formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(mucilage, anatomy), OBO_REL:unfolds_in=FBbt:00004514]) [-10] ! parse: GO:0048357 using "pedicel mucilage formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(mucilage, anatomy), OBO_REL:unfolds_in=FBbt:00004920]) [-10] ! parse: GO:0048357 using "pedicel mucilage formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(mucilage, anatomy), OBO_REL:unfolds_in=PO:0009052]) [-10] ! parse: GO:0048357 using "pedicel mucilage synthesis" => cdef(GO:0010192, [OBO_REL:results_in_creation_of=FBbt:00004514]) [-2] ! parse: GO:0048357 using "pedicel mucilage synthesis" => cdef(GO:0010192, [OBO_REL:results_in_creation_of=FBbt:00004920]) [-2] ! parse: GO:0048357 using "pedicel mucilage synthesis" => cdef(GO:0010192, [OBO_REL:results_in_creation_of=PO:0009052]) [-2] ! no existing xp def ! def: "The chemical reactions and pathways resulting in the formation of mucilage that occur in the flower stem." ! PROPOSED: mucilage biosynthetic process that OBO_REL:results_in_creation_of pedicel [cdef(GO:0010192, [OBO_REL:results_in_creation_of=PO:0009052])] [Term] id: GO:0048357 ! pedicel mucilage biosynthetic process intersection_of: GO:0010192 ! mucilage biosynthetic process intersection_of: OBO_REL:results_in_creation_of PO:0009052 ! pedicel ! seconds spent parsing GO:0048357: 37.41 ! No parse for: GO:0048360 root cap mucilage metabolic process ! No parse for: GO:0048361 root epithelial mucilage metabolic process ! No parse for: GO:0048362 pedicel mucilage metabolic process ! No relation defined: results_in_complete_developmental_of ! parse: GO:0048364 using "root development" => cdef(GO:0032502, [results_in_complete_developmental_of=PO:0009005]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the root over time, from its formation to the mature structure. The root is the water- and mineral-absorbing part of a plant which is usually underground, does not bear leaves, tends to grow downwards and is typically derived from the radicle of the embryo." ! PROPOSED: developmental process that results_in_complete_developmental_of root [cdef(GO:0032502, [results_in_complete_developmental_of=PO:0009005])] [Term] id: GO:0048364 ! root development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of PO:0009005 ! root ! seconds spent parsing GO:0048364: 4.76 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0048366 using "leaf development" => cdef(GO:0032502, [results_in_complete_developmental_of=PO:0009025]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the leaf over time, from its formation to the mature structure." ! PROPOSED: developmental process that results_in_complete_developmental_of leaf [cdef(GO:0032502, [results_in_complete_developmental_of=PO:0009025])] [Term] id: GO:0048366 ! leaf development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of PO:0009025 ! leaf ! seconds spent parsing GO:0048366: 4.76 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0048367 using "shoot development" => cdef(GO:0032502, [results_in_complete_developmental_of=PO:0009006]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the shoot over time, from its formation to the mature structure." ! PROPOSED: developmental process that results_in_complete_developmental_of shoot [cdef(GO:0032502, [results_in_complete_developmental_of=PO:0009006])] [Term] id: GO:0048367 ! shoot development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of PO:0009006 ! shoot ! seconds spent parsing GO:0048367: 4.79 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0048368 using "lateral mesoderm development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0001065]) [-2] ! parse: GO:0048368 using "lateral plate mesoderm development" => cdef(GO:0007498, [OBO_REL:results_in_developmental_progression_of=FBbt:00004842]) [-2] ! parse: GO:0048368 using "lateral plate mesoderm development" => cdef(GO:0007498, [OBO_REL:results_in_developmental_progression_of=ZFA:0000121]) [-2] ! parse: GO:0048368 using "lateral plate mesoderm development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=FBbt:00000126, OBO_REL:unfolds_in=FBbt:00004842]) [-3] ! parse: GO:0048368 using "lateral plate mesoderm development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=FBbt:00000126, OBO_REL:unfolds_in=ZFA:0000121]) [-3] ! parse: GO:0048368 using "lateral plate mesoderm development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=ZFA:0000041, OBO_REL:unfolds_in=FBbt:00004842]) [-3] ! parse: GO:0048368 using "lateral plate mesoderm development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=ZFA:0000041, OBO_REL:unfolds_in=ZFA:0000121]) [-3] ! parse: GO:0048368 using "lateral plate mesoderm development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00000126, OBO_REL:unfolds_in=FBbt:00004842]) [-3] ! parse: GO:0048368 using "lateral plate mesoderm development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00000126, OBO_REL:unfolds_in=ZFA:0000121]) [-3] ! parse: GO:0048368 using "lateral plate mesoderm development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000041, OBO_REL:unfolds_in=FBbt:00004842]) [-3] ! parse: GO:0048368 using "lateral plate mesoderm development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000041, OBO_REL:unfolds_in=ZFA:0000121]) [-3] ! parse: GO:0048368 using "lateral plate mesoderm development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000121]) [-2] ! parse: GO:0048368 using "lateral plate mesoderm development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(FBbt:00000126, [OBO_REL:part_of=FBbt:00004842])]) [-3] ! parse: GO:0048368 using "lateral plate mesoderm development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(FBbt:00000126, [OBO_REL:part_of=ZFA:0000121])]) [-3] ! parse: GO:0048368 using "lateral plate mesoderm development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(ZFA:0000041, [OBO_REL:part_of=FBbt:00004842])]) [-3] ! parse: GO:0048368 using "lateral plate mesoderm development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(ZFA:0000041, [OBO_REL:part_of=ZFA:0000121])]) [-3] ! no existing xp def ! def: "The process whose specific outcome is the progression of the lateral mesoderm over time, from its formation to the mature structure." ! PROPOSED: developmental process that results_in_complete_developmental_of lateral mesoderm [cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0001065])] [Term] id: GO:0048368 ! lateral mesoderm development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of ZFA:0001065 ! lateral mesoderm ! seconds spent parsing GO:0048368: 16.16 ! parse: GO:0048369 using "lateral mesoderm morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0001065]) [-2] ! parse: GO:0048369 using "lateral plate mesoderm morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00000126, OBO_REL:unfolds_in=FBbt:00004842]) [-3] ! parse: GO:0048369 using "lateral plate mesoderm morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00000126, OBO_REL:unfolds_in=ZFA:0000121]) [-3] ! parse: GO:0048369 using "lateral plate mesoderm morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0000041, OBO_REL:unfolds_in=FBbt:00004842]) [-3] ! parse: GO:0048369 using "lateral plate mesoderm morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0000041, OBO_REL:unfolds_in=ZFA:0000121]) [-3] ! parse: GO:0048369 using "lateral plate mesoderm morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0000121]) [-2] ! parse: GO:0048369 using "lateral plate mesoderm morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=cdef(FBbt:00000126, [OBO_REL:part_of=FBbt:00004842])]) [-3] ! parse: GO:0048369 using "lateral plate mesoderm morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=cdef(FBbt:00000126, [OBO_REL:part_of=ZFA:0000121])]) [-3] ! parse: GO:0048369 using "lateral plate mesoderm morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=cdef(ZFA:0000041, [OBO_REL:part_of=FBbt:00004842])]) [-3] ! parse: GO:0048369 using "lateral plate mesoderm morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=cdef(ZFA:0000041, [OBO_REL:part_of=ZFA:0000121])]) [-3] ! parse: GO:0048369 using "lateral plate mesoderm morphogenesis" => cdef(GO:0048332, [OBO_REL:results_in_developmental_progression_of=FBbt:00004842]) [-2] ! parse: GO:0048369 using "lateral plate mesoderm morphogenesis" => cdef(GO:0048332, [OBO_REL:results_in_developmental_progression_of=ZFA:0000121]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of the lateral mesoderm are generated and organized. Morphogenesis pertains to the creation of form." ! PROPOSED: mesoderm morphogenesis that OBO_REL:results_in_developmental_progression_of lateral plate mesoderm [cdef(GO:0048332, [OBO_REL:results_in_developmental_progression_of=ZFA:0000121])] [Term] id: GO:0048369 ! lateral mesoderm morphogenesis intersection_of: GO:0048332 ! mesoderm morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0000121 ! lateral plate mesoderm ! seconds spent parsing GO:0048369: 18.73 ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0048370 using "lateral mesoderm formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=ZFA:0001065]) [-2] ! parse: GO:0048370 using "lateral mesoderm formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0001065]) [-2] ! parse: GO:0048370 using "lateral plate mesoderm biosynthesis" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=FBbt:00000126, OBO_REL:unfolds_in=FBbt:00004842]) [-3] ! parse: GO:0048370 using "lateral plate mesoderm biosynthesis" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=FBbt:00000126, OBO_REL:unfolds_in=ZFA:0000121]) [-3] ! parse: GO:0048370 using "lateral plate mesoderm biosynthesis" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=ZFA:0000041, OBO_REL:unfolds_in=FBbt:00004842]) [-3] ! parse: GO:0048370 using "lateral plate mesoderm biosynthesis" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=ZFA:0000041, OBO_REL:unfolds_in=ZFA:0000121]) [-3] ! parse: GO:0048370 using "lateral plate mesoderm biosynthesis" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=ZFA:0000121]) [-2] ! parse: GO:0048370 using "lateral plate mesoderm biosynthesis" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=cdef(FBbt:00000126, [OBO_REL:part_of=FBbt:00004842])]) [-3] ! parse: GO:0048370 using "lateral plate mesoderm biosynthesis" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=cdef(FBbt:00000126, [OBO_REL:part_of=ZFA:0000121])]) [-3] ! parse: GO:0048370 using "lateral plate mesoderm biosynthesis" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=cdef(ZFA:0000041, [OBO_REL:part_of=FBbt:00004842])]) [-3] ! parse: GO:0048370 using "lateral plate mesoderm biosynthesis" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=cdef(ZFA:0000041, [OBO_REL:part_of=ZFA:0000121])]) [-3] ! parse: GO:0048370 using "lateral plate mesoderm formation" => cdef(GO:0001707, [OBO_REL:results_in_developmental_progression_of=FBbt:00004842]) [-2] ! parse: GO:0048370 using "lateral plate mesoderm formation" => cdef(GO:0001707, [OBO_REL:results_in_developmental_progression_of=ZFA:0000121]) [-2] ! parse: GO:0048370 using "lateral plate mesoderm formation" => cdef(GO:0001707, [OBO_REL:results_in_formation_of=FBbt:00004842]) [-2] ! parse: GO:0048370 using "lateral plate mesoderm formation" => cdef(GO:0001707, [OBO_REL:results_in_formation_of=ZFA:0000121]) [-2] ! parse: GO:0048370 using "lateral plate mesoderm formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=FBbt:00000126, OBO_REL:unfolds_in=FBbt:00004842]) [-3] ! parse: GO:0048370 using "lateral plate mesoderm formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=FBbt:00000126, OBO_REL:unfolds_in=ZFA:0000121]) [-3] ! parse: GO:0048370 using "lateral plate mesoderm formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=ZFA:0000041, OBO_REL:unfolds_in=FBbt:00004842]) [-3] ! parse: GO:0048370 using "lateral plate mesoderm formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=ZFA:0000041, OBO_REL:unfolds_in=ZFA:0000121]) [-3] ! parse: GO:0048370 using "lateral plate mesoderm formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=ZFA:0000121]) [-2] ! parse: GO:0048370 using "lateral plate mesoderm formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=cdef(FBbt:00000126, [OBO_REL:part_of=FBbt:00004842])]) [-3] ! parse: GO:0048370 using "lateral plate mesoderm formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=cdef(FBbt:00000126, [OBO_REL:part_of=ZFA:0000121])]) [-3] ! parse: GO:0048370 using "lateral plate mesoderm formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=cdef(ZFA:0000041, [OBO_REL:part_of=FBbt:00004842])]) [-3] ! parse: GO:0048370 using "lateral plate mesoderm formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=cdef(ZFA:0000041, [OBO_REL:part_of=ZFA:0000121])]) [-3] ! parse: GO:0048370 using "lateral plate mesoderm formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=FBbt:00000126, OBO_REL:unfolds_in=FBbt:00004842]) [-3] ! parse: GO:0048370 using "lateral plate mesoderm formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=FBbt:00000126, OBO_REL:unfolds_in=ZFA:0000121]) [-3] ! parse: GO:0048370 using "lateral plate mesoderm formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0000041, OBO_REL:unfolds_in=FBbt:00004842]) [-3] ! parse: GO:0048370 using "lateral plate mesoderm formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0000041, OBO_REL:unfolds_in=ZFA:0000121]) [-3] ! parse: GO:0048370 using "lateral plate mesoderm formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0000121]) [-2] ! parse: GO:0048370 using "lateral plate mesoderm formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=cdef(FBbt:00000126, [OBO_REL:part_of=FBbt:00004842])]) [-3] ! parse: GO:0048370 using "lateral plate mesoderm formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=cdef(FBbt:00000126, [OBO_REL:part_of=ZFA:0000121])]) [-3] ! parse: GO:0048370 using "lateral plate mesoderm formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=cdef(ZFA:0000041, [OBO_REL:part_of=FBbt:00004842])]) [-3] ! parse: GO:0048370 using "lateral plate mesoderm formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=cdef(ZFA:0000041, [OBO_REL:part_of=ZFA:0000121])]) [-3] ! no existing xp def ! def: "The process that gives rise to the lateral mesoderm. This process pertains to the initial formation of the structure from unspecified parts." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of lateral mesoderm [cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0001065])] [Term] id: GO:0048370 ! lateral mesoderm formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of ZFA:0001065 ! lateral mesoderm ! seconds spent parsing GO:0048370: 36.79 ! parse: GO:0048371 using "lateral mesoderm cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000000, OBO_REL:unfolds_in=ZFA:0001065]) [-3] ! parse: GO:0048371 using "lateral mesoderm cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(lateral mesoderm, cell)]) [-17] ! parse: GO:0048371 using "lateral mesoderm cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(lateral mesoderm cell, cell)]) [-22] ! parse: GO:0048371 using "lateral mesoderm cell differentiation" => cdef(GO:0048333, [OBO_REL:results_in_acquisition_of_features_of=anon(lateral, cell)]) [-8] ! parse: GO:0048371 using "lateral mesodermal cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(lateral mesodermal, cell)]) [-19] ! parse: GO:0048371 using "lateral mesodermal cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(lateral mesodermal cell, cell)]) [-24] ! parse: GO:0048371 using "lateral mesodermal cell differentiation" => cdef(GO:0048333, [OBO_REL:results_in_acquisition_of_features_of=anon(lateral, cell)]) [-8] ! parse: GO:0048371 using "lateral mesodermal cell differentiation" => cdef(GO:0048333, [OBO_REL:results_in_developmental_progression_of=anon(lateral, anatomy)]) [-8] ! parse: GO:0048371 using "lateral plate mesoderm cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000000, OBO_REL:unfolds_in=ZFA:0000121]) [-3] ! parse: GO:0048371 using "lateral plate mesoderm cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000000, OBO_REL:unfolds_in=cdef(FBbt:00000126, [OBO_REL:part_of=FBbt:00004842])]) [-4] ! parse: GO:0048371 using "lateral plate mesoderm cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000000, OBO_REL:unfolds_in=cdef(FBbt:00000126, [OBO_REL:part_of=ZFA:0000121])]) [-4] ! parse: GO:0048371 using "lateral plate mesoderm cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000000, OBO_REL:unfolds_in=cdef(ZFA:0000041, [OBO_REL:part_of=FBbt:00004842])]) [-4] ! parse: GO:0048371 using "lateral plate mesoderm cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000000, OBO_REL:unfolds_in=cdef(ZFA:0000041, [OBO_REL:part_of=ZFA:0000121])]) [-4] ! parse: GO:0048371 using "lateral plate mesoderm cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000222, OBO_REL:unfolds_in=FBbt:00004842]) [-3] ! parse: GO:0048371 using "lateral plate mesoderm cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000222, OBO_REL:unfolds_in=ZFA:0000121]) [-3] ! parse: GO:0048371 using "lateral plate mesoderm cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(lateral plate mesoderm, cell)]) [-23] ! parse: GO:0048371 using "lateral plate mesoderm cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(lateral plate mesoderm cell, cell)]) [-28] ! parse: GO:0048371 using "lateral plate mesoderm cell differentiation" => cdef(GO:0030154, [and=results_in_acquisition_of_features_of(CL:0000000)/unfolds_in(FBbt:00000126), OBO_REL:unfolds_in=FBbt:00004842]) [-3] ! parse: GO:0048371 using "lateral plate mesoderm cell differentiation" => cdef(GO:0030154, [and=results_in_acquisition_of_features_of(CL:0000000)/unfolds_in(FBbt:00000126), OBO_REL:unfolds_in=ZFA:0000121]) [-3] ! parse: GO:0048371 using "lateral plate mesoderm cell differentiation" => cdef(GO:0030154, [and=results_in_acquisition_of_features_of(CL:0000000)/unfolds_in(ZFA:0000041), OBO_REL:unfolds_in=FBbt:00004842]) [-3] ! parse: GO:0048371 using "lateral plate mesoderm cell differentiation" => cdef(GO:0030154, [and=results_in_acquisition_of_features_of(CL:0000000)/unfolds_in(ZFA:0000041), OBO_REL:unfolds_in=ZFA:0000121]) [-3] ! parse: GO:0048371 using "lateral plate mesoderm cell differentiation" => cdef(GO:0048333, [OBO_REL:results_in_acquisition_of_features_of=anon(lateral plate, cell)]) [-14] ! parse: GO:0048371 using "lateral plate mesoderm cell differentiation" => cdef(GO:0048333, [OBO_REL:results_in_developmental_progression_of=FBbt:00004842]) [-2] ! parse: GO:0048371 using "lateral plate mesoderm cell differentiation" => cdef(GO:0048333, [OBO_REL:results_in_developmental_progression_of=ZFA:0000121]) [-2] ! parse: GO:0048371 using "lateral plate mesodermal cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000222, OBO_REL:unfolds_in=FBbt:00004842]) [-3] ! parse: GO:0048371 using "lateral plate mesodermal cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000222, OBO_REL:unfolds_in=ZFA:0000121]) [-3] ! parse: GO:0048371 using "lateral plate mesodermal cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(lateral plate mesodermal, cell)]) [-25] ! parse: GO:0048371 using "lateral plate mesodermal cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(lateral plate mesodermal cell, cell)]) [-30] ! parse: GO:0048371 using "lateral plate mesodermal cell differentiation" => cdef(GO:0048333, [OBO_REL:results_in_acquisition_of_features_of=anon(lateral plate, cell)]) [-14] ! parse: GO:0048371 using "lateral plate mesodermal cell differentiation" => cdef(GO:0048333, [OBO_REL:results_in_developmental_progression_of=FBbt:00004842]) [-2] ! parse: GO:0048371 using "lateral plate mesodermal cell differentiation" => cdef(GO:0048333, [OBO_REL:results_in_developmental_progression_of=ZFA:0000121]) [-2] ! no existing xp def ! def: "The process whereby a relatively unspecialized cell acquires the specialized features of a lateral mesoderm cell." ! PROPOSED: mesodermal cell differentiation that OBO_REL:results_in_developmental_progression_of lateral plate mesoderm [cdef(GO:0048333, [OBO_REL:results_in_developmental_progression_of=ZFA:0000121])] [Term] id: GO:0048371 ! lateral mesodermal cell differentiation intersection_of: GO:0048333 ! mesodermal cell differentiation intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0000121 ! lateral plate mesoderm ! seconds spent parsing GO:0048371: 72.54 ! parse: GO:0048372 using "lateral mesoderm cell fate commitment" => cdef(GO:0045165, [OBO_REL:results_in_commitment_to=CL:0000000, OBO_REL:unfolds_in=ZFA:0001065]) [-3] ! parse: GO:0048372 using "lateral plate mesoderm cell fate commitment" => cdef(GO:0045165, [OBO_REL:results_in_commitment_to=CL:0000000, OBO_REL:unfolds_in=ZFA:0000121]) [-3] ! parse: GO:0048372 using "lateral plate mesoderm cell fate commitment" => cdef(GO:0045165, [OBO_REL:results_in_commitment_to=CL:0000000, OBO_REL:unfolds_in=cdef(FBbt:00000126, [OBO_REL:part_of=FBbt:00004842])]) [-4] ! parse: GO:0048372 using "lateral plate mesoderm cell fate commitment" => cdef(GO:0045165, [OBO_REL:results_in_commitment_to=CL:0000000, OBO_REL:unfolds_in=cdef(FBbt:00000126, [OBO_REL:part_of=ZFA:0000121])]) [-4] ! parse: GO:0048372 using "lateral plate mesoderm cell fate commitment" => cdef(GO:0045165, [OBO_REL:results_in_commitment_to=CL:0000000, OBO_REL:unfolds_in=cdef(ZFA:0000041, [OBO_REL:part_of=FBbt:00004842])]) [-4] ! parse: GO:0048372 using "lateral plate mesoderm cell fate commitment" => cdef(GO:0045165, [OBO_REL:results_in_commitment_to=CL:0000000, OBO_REL:unfolds_in=cdef(ZFA:0000041, [OBO_REL:part_of=ZFA:0000121])]) [-4] ! parse: GO:0048372 using "lateral plate mesoderm cell fate commitment" => cdef(GO:0045165, [OBO_REL:results_in_commitment_to=CL:0000222, OBO_REL:unfolds_in=FBbt:00004842]) [-3] ! parse: GO:0048372 using "lateral plate mesoderm cell fate commitment" => cdef(GO:0045165, [OBO_REL:results_in_commitment_to=CL:0000222, OBO_REL:unfolds_in=ZFA:0000121]) [-3] ! parse: GO:0048372 using "lateral plate mesoderm cell fate commitment" => cdef(GO:0045165, [and=results_in_commitment_to(CL:0000000)/unfolds_in(FBbt:00000126), OBO_REL:unfolds_in=FBbt:00004842]) [-3] ! parse: GO:0048372 using "lateral plate mesoderm cell fate commitment" => cdef(GO:0045165, [and=results_in_commitment_to(CL:0000000)/unfolds_in(FBbt:00000126), OBO_REL:unfolds_in=ZFA:0000121]) [-3] ! parse: GO:0048372 using "lateral plate mesoderm cell fate commitment" => cdef(GO:0045165, [and=results_in_commitment_to(CL:0000000)/unfolds_in(ZFA:0000041), OBO_REL:unfolds_in=FBbt:00004842]) [-3] ! parse: GO:0048372 using "lateral plate mesoderm cell fate commitment" => cdef(GO:0045165, [and=results_in_commitment_to(CL:0000000)/unfolds_in(ZFA:0000041), OBO_REL:unfolds_in=ZFA:0000121]) [-3] ! parse: GO:0048372 using "lateral plate mesodermal cell fate commitment" => cdef(GO:0045165, [OBO_REL:results_in_commitment_to=CL:0000222, OBO_REL:unfolds_in=FBbt:00004842]) [-3] ! parse: GO:0048372 using "lateral plate mesodermal cell fate commitment" => cdef(GO:0045165, [OBO_REL:results_in_commitment_to=CL:0000222, OBO_REL:unfolds_in=ZFA:0000121]) [-3] ! no existing xp def ! def: "The process by which a cell becomes committed to become a lateral mesoderm cell." ! PROPOSED: cell fate commitment that and results_in_commitment_to(CL:0000000)/unfolds_in(ZFA:0000041) and OBO_REL:unfolds_in lateral plate mesoderm [cdef(GO:0045165, [and=results_in_commitment_to(CL:0000000)/unfolds_in(ZFA:0000041), OBO_REL:unfolds_in=ZFA:0000121])] [Term] id: GO:0048372 ! lateral mesodermal cell fate commitment intersection_of: GO:0045165 ! cell fate commitment intersection_of: and results_in_commitment_to(CL:0000000)/unfolds_in(ZFA:0000041) intersection_of: OBO_REL:unfolds_in ZFA:0000121 ! lateral plate mesoderm ! seconds spent parsing GO:0048372: 72.31 ! parse: GO:0048373 using "lateral mesoderm cell fate determination" => cdef(GO:0001709, [OBO_REL:results_in_determination_to=CL:0000000, OBO_REL:unfolds_in=ZFA:0001065]) [-3] ! parse: GO:0048373 using "lateral plate mesoderm cell fate determination" => cdef(GO:0001709, [OBO_REL:results_in_determination_to=CL:0000000, OBO_REL:unfolds_in=ZFA:0000121]) [-3] ! parse: GO:0048373 using "lateral plate mesoderm cell fate determination" => cdef(GO:0001709, [OBO_REL:results_in_determination_to=CL:0000000, OBO_REL:unfolds_in=cdef(FBbt:00000126, [OBO_REL:part_of=FBbt:00004842])]) [-4] ! parse: GO:0048373 using "lateral plate mesoderm cell fate determination" => cdef(GO:0001709, [OBO_REL:results_in_determination_to=CL:0000000, OBO_REL:unfolds_in=cdef(FBbt:00000126, [OBO_REL:part_of=ZFA:0000121])]) [-4] ! parse: GO:0048373 using "lateral plate mesoderm cell fate determination" => cdef(GO:0001709, [OBO_REL:results_in_determination_to=CL:0000000, OBO_REL:unfolds_in=cdef(ZFA:0000041, [OBO_REL:part_of=FBbt:00004842])]) [-4] ! parse: GO:0048373 using "lateral plate mesoderm cell fate determination" => cdef(GO:0001709, [OBO_REL:results_in_determination_to=CL:0000000, OBO_REL:unfolds_in=cdef(ZFA:0000041, [OBO_REL:part_of=ZFA:0000121])]) [-4] ! parse: GO:0048373 using "lateral plate mesoderm cell fate determination" => cdef(GO:0001709, [OBO_REL:results_in_determination_to=CL:0000222, OBO_REL:unfolds_in=FBbt:00004842]) [-3] ! parse: GO:0048373 using "lateral plate mesoderm cell fate determination" => cdef(GO:0001709, [OBO_REL:results_in_determination_to=CL:0000222, OBO_REL:unfolds_in=ZFA:0000121]) [-3] ! parse: GO:0048373 using "lateral plate mesoderm cell fate determination" => cdef(GO:0001709, [and=results_in_determination_to(CL:0000000)/unfolds_in(FBbt:00000126), OBO_REL:unfolds_in=FBbt:00004842]) [-3] ! parse: GO:0048373 using "lateral plate mesoderm cell fate determination" => cdef(GO:0001709, [and=results_in_determination_to(CL:0000000)/unfolds_in(FBbt:00000126), OBO_REL:unfolds_in=ZFA:0000121]) [-3] ! parse: GO:0048373 using "lateral plate mesoderm cell fate determination" => cdef(GO:0001709, [and=results_in_determination_to(CL:0000000)/unfolds_in(ZFA:0000041), OBO_REL:unfolds_in=FBbt:00004842]) [-3] ! parse: GO:0048373 using "lateral plate mesoderm cell fate determination" => cdef(GO:0001709, [and=results_in_determination_to(CL:0000000)/unfolds_in(ZFA:0000041), OBO_REL:unfolds_in=ZFA:0000121]) [-3] ! parse: GO:0048373 using "lateral plate mesodermal cell fate determination" => cdef(GO:0001709, [OBO_REL:results_in_determination_to=CL:0000222, OBO_REL:unfolds_in=FBbt:00004842]) [-3] ! parse: GO:0048373 using "lateral plate mesodermal cell fate determination" => cdef(GO:0001709, [OBO_REL:results_in_determination_to=CL:0000222, OBO_REL:unfolds_in=ZFA:0000121]) [-3] ! no existing xp def ! def: "Process by which a cell becomes capable of differentiating autonomously into a lateral mesoderm cell regardless of its environment; upon determination, the cell fate cannot be reversed." ! PROPOSED: cell fate determination that and results_in_determination_to(CL:0000000)/unfolds_in(ZFA:0000041) and OBO_REL:unfolds_in lateral plate mesoderm [cdef(GO:0001709, [and=results_in_determination_to(CL:0000000)/unfolds_in(ZFA:0000041), OBO_REL:unfolds_in=ZFA:0000121])] [Term] id: GO:0048373 ! lateral mesodermal cell fate determination intersection_of: GO:0001709 ! cell fate determination intersection_of: and results_in_determination_to(CL:0000000)/unfolds_in(ZFA:0000041) intersection_of: OBO_REL:unfolds_in ZFA:0000121 ! lateral plate mesoderm ! seconds spent parsing GO:0048373: 71.79 ! parse: GO:0048377 using "lateral mesoderm cell fate specification" => cdef(GO:0001708, [OBO_REL:results_in_specification_of=CL:0000000, OBO_REL:unfolds_in=ZFA:0001065]) [-3] ! parse: GO:0048377 using "lateral plate mesoderm cell fate specification" => cdef(GO:0001708, [OBO_REL:results_in_specification_of=CL:0000000, OBO_REL:unfolds_in=ZFA:0000121]) [-3] ! parse: GO:0048377 using "lateral plate mesoderm cell fate specification" => cdef(GO:0001708, [OBO_REL:results_in_specification_of=CL:0000000, OBO_REL:unfolds_in=cdef(FBbt:00000126, [OBO_REL:part_of=FBbt:00004842])]) [-4] ! parse: GO:0048377 using "lateral plate mesoderm cell fate specification" => cdef(GO:0001708, [OBO_REL:results_in_specification_of=CL:0000000, OBO_REL:unfolds_in=cdef(FBbt:00000126, [OBO_REL:part_of=ZFA:0000121])]) [-4] ! parse: GO:0048377 using "lateral plate mesoderm cell fate specification" => cdef(GO:0001708, [OBO_REL:results_in_specification_of=CL:0000000, OBO_REL:unfolds_in=cdef(ZFA:0000041, [OBO_REL:part_of=FBbt:00004842])]) [-4] ! parse: GO:0048377 using "lateral plate mesoderm cell fate specification" => cdef(GO:0001708, [OBO_REL:results_in_specification_of=CL:0000000, OBO_REL:unfolds_in=cdef(ZFA:0000041, [OBO_REL:part_of=ZFA:0000121])]) [-4] ! parse: GO:0048377 using "lateral plate mesoderm cell fate specification" => cdef(GO:0001708, [OBO_REL:results_in_specification_of=CL:0000222, OBO_REL:unfolds_in=FBbt:00004842]) [-3] ! parse: GO:0048377 using "lateral plate mesoderm cell fate specification" => cdef(GO:0001708, [OBO_REL:results_in_specification_of=CL:0000222, OBO_REL:unfolds_in=ZFA:0000121]) [-3] ! parse: GO:0048377 using "lateral plate mesoderm cell fate specification" => cdef(GO:0001708, [and=results_in_specification_of(CL:0000000)/unfolds_in(FBbt:00000126), OBO_REL:unfolds_in=FBbt:00004842]) [-3] ! parse: GO:0048377 using "lateral plate mesoderm cell fate specification" => cdef(GO:0001708, [and=results_in_specification_of(CL:0000000)/unfolds_in(FBbt:00000126), OBO_REL:unfolds_in=ZFA:0000121]) [-3] ! parse: GO:0048377 using "lateral plate mesoderm cell fate specification" => cdef(GO:0001708, [and=results_in_specification_of(CL:0000000)/unfolds_in(ZFA:0000041), OBO_REL:unfolds_in=FBbt:00004842]) [-3] ! parse: GO:0048377 using "lateral plate mesoderm cell fate specification" => cdef(GO:0001708, [and=results_in_specification_of(CL:0000000)/unfolds_in(ZFA:0000041), OBO_REL:unfolds_in=ZFA:0000121]) [-3] ! parse: GO:0048377 using "lateral plate mesodermal cell fate specification" => cdef(GO:0001708, [OBO_REL:results_in_specification_of=CL:0000222, OBO_REL:unfolds_in=FBbt:00004842]) [-3] ! parse: GO:0048377 using "lateral plate mesodermal cell fate specification" => cdef(GO:0001708, [OBO_REL:results_in_specification_of=CL:0000222, OBO_REL:unfolds_in=ZFA:0000121]) [-3] ! no existing xp def ! def: "Process by which a cell becomes capable of differentiating autonomously into a lateral mesoderm cell in an environment that is neutral with respect to the developmental pathway; upon specification, the cell fate can be reversed." ! PROPOSED: cell fate specification that and results_in_specification_of(CL:0000000)/unfolds_in(ZFA:0000041) and OBO_REL:unfolds_in lateral plate mesoderm [cdef(GO:0001708, [and=results_in_specification_of(CL:0000000)/unfolds_in(ZFA:0000041), OBO_REL:unfolds_in=ZFA:0000121])] [Term] id: GO:0048377 ! lateral mesodermal cell fate specification intersection_of: GO:0001708 ! cell fate specification intersection_of: and results_in_specification_of(CL:0000000)/unfolds_in(ZFA:0000041) intersection_of: OBO_REL:unfolds_in ZFA:0000121 ! lateral plate mesoderm ! seconds spent parsing GO:0048377: 71.85 ! parse: GO:0048381 using "lateral mesoderm structural organization" => cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=ZFA:0001065]) [-2] ! parse: GO:0048381 using "lateral plate mesoderm structural organization" => cdef(GO:0048338, [OBO_REL:results_in_developmental_progression_of=FBbt:00004842]) [-2] ! parse: GO:0048381 using "lateral plate mesoderm structural organization" => cdef(GO:0048338, [OBO_REL:results_in_developmental_progression_of=ZFA:0000121]) [-2] ! parse: GO:0048381 using "lateral plate mesoderm structural organization" => cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=FBbt:00000126, OBO_REL:unfolds_in=FBbt:00004842]) [-3] ! parse: GO:0048381 using "lateral plate mesoderm structural organization" => cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=FBbt:00000126, OBO_REL:unfolds_in=ZFA:0000121]) [-3] ! parse: GO:0048381 using "lateral plate mesoderm structural organization" => cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=ZFA:0000041, OBO_REL:unfolds_in=FBbt:00004842]) [-3] ! parse: GO:0048381 using "lateral plate mesoderm structural organization" => cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=ZFA:0000041, OBO_REL:unfolds_in=ZFA:0000121]) [-3] ! parse: GO:0048381 using "lateral plate mesoderm structural organization" => cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=ZFA:0000121]) [-2] ! parse: GO:0048381 using "lateral plate mesoderm structural organization" => cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=cdef(FBbt:00000126, [OBO_REL:part_of=FBbt:00004842])]) [-3] ! parse: GO:0048381 using "lateral plate mesoderm structural organization" => cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=cdef(FBbt:00000126, [OBO_REL:part_of=ZFA:0000121])]) [-3] ! parse: GO:0048381 using "lateral plate mesoderm structural organization" => cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=cdef(ZFA:0000041, [OBO_REL:part_of=FBbt:00004842])]) [-3] ! parse: GO:0048381 using "lateral plate mesoderm structural organization" => cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=cdef(ZFA:0000041, [OBO_REL:part_of=ZFA:0000121])]) [-3] ! no existing xp def ! def: "The process that contributes to the act of creating the structural organization of the lateral mesoderm. This process pertains to the physical shaping of a rudimentary structure." ! PROPOSED: organization of an anatomical structure that OBO_REL:results_in_developmental_progression_of lateral mesoderm [cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=ZFA:0001065])] [Term] id: GO:0048381 ! lateral mesoderm structural organization intersection_of: GO:0048532 ! organization of an anatomical structure intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0001065 ! lateral mesoderm ! seconds spent parsing GO:0048381: 23.57 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0048382 using "mesendoderm development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000117]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the mesendoderm over time, from its formation to the mature structure. In animal embryos, mesendoderm development gives rise to both mesoderm and endoderm tissues." ! PROPOSED: developmental process that results_in_complete_developmental_of hypoblast [cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000117])] [Term] id: GO:0048382 ! mesendoderm development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of ZFA:0000117 ! hypoblast synonym: "hypoblast development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0048382: 4.76 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0048383 using "mesectoderm development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00000136]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the mesectoderm over time, from its formation to the mature structure. In animal embryos, mesectoderm development processes give rise to both mesoderm and ectoderm tissues." ! PROPOSED: developmental process that results_in_complete_developmental_of mesectoderm [cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00000136])] [Term] id: GO:0048383 ! mesectoderm development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of FBbt:00000136 ! mesectoderm synonym: "MesEc development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0048383: 4.83 ! No parse for: GO:0048388 endosomal lumen acidification ! No relation defined: results_in_complete_developmental_of ! parse: GO:0048389 using "intermediate mesoderm development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0001206]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the intermediate mesoderm over time, from its formation to the mature structure. The intermediate mesoderm is located between the lateral mesoderm and the paraxial mesoderm. It develops into the kidney and gonads." ! PROPOSED: developmental process that results_in_complete_developmental_of intermediate mesoderm [cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0001206])] [Term] id: GO:0048389 ! intermediate mesoderm development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of ZFA:0001206 ! intermediate mesoderm synonym: "IM development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0048389: 4.9 ! parse: GO:0048390 using "intermediate mesoderm morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0001206]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of the intermediate mesoderm are generated and organized. Morphogenesis pertains to the creation of form." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of intermediate mesoderm [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0001206])] [Term] id: GO:0048390 ! intermediate mesoderm morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0001206 ! intermediate mesoderm synonym: "IM anatomical structure morphogenesis" EXACT [OBOL:automatic] synonym: "IM morphogenesis" EXACT [OBOL:automatic] ! seconds spent parsing GO:0048390: 5.32 ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0048391 using "intermediate mesoderm formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=ZFA:0001206]) [-2] ! parse: GO:0048391 using "intermediate mesoderm formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0001206]) [-2] ! no existing xp def ! def: "The process that gives rise to the intermediate mesoderm. This process pertains to the initial formation of the structure from unspecified parts." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of intermediate mesoderm [cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0001206])] [Term] id: GO:0048391 ! intermediate mesoderm formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of ZFA:0001206 ! intermediate mesoderm synonym: "IM anatomical structure formation" EXACT [OBOL:automatic] synonym: "IM formation" EXACT [OBOL:automatic] synonym: "IM formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0048391: 5.4 ! parse: GO:0048392 using "intermediate mesoderm cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000000, OBO_REL:unfolds_in=ZFA:0001206]) [-3] ! parse: GO:0048392 using "intermediate mesoderm cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(intermediate mesoderm, cell)]) [-22] ! parse: GO:0048392 using "intermediate mesoderm cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(intermediate mesoderm cell, cell)]) [-27] ! parse: GO:0048392 using "intermediate mesoderm cell differentiation" => cdef(GO:0048333, [OBO_REL:results_in_acquisition_of_features_of=anon(intermediate, cell)]) [-13] ! parse: GO:0048392 using "intermediate mesodermal cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(intermediate mesodermal, cell)]) [-24] ! parse: GO:0048392 using "intermediate mesodermal cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(intermediate mesodermal cell, cell)]) [-29] ! parse: GO:0048392 using "intermediate mesodermal cell differentiation" => cdef(GO:0048333, [OBO_REL:results_in_acquisition_of_features_of=anon(intermediate, cell)]) [-13] ! parse: GO:0048392 using "intermediate mesodermal cell differentiation" => cdef(GO:0048333, [OBO_REL:results_in_developmental_progression_of=anon(intermediate, anatomy)]) [-13] ! no existing xp def ! def: "The process whereby a relatively unspecialized cell acquires specialized features of an intermediate mesoderm cell." ! PROPOSED: cell differentiation that OBO_REL:results_in_acquisition_of_features_of cell and OBO_REL:unfolds_in intermediate mesoderm [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000000, OBO_REL:unfolds_in=ZFA:0001206])] [Term] id: GO:0048392 ! intermediate mesodermal cell differentiation intersection_of: GO:0030154 ! cell differentiation intersection_of: OBO_REL:results_in_acquisition_of_features_of CL:0000000 ! cell intersection_of: OBO_REL:unfolds_in ZFA:0001206 ! intermediate mesoderm synonym: "IM cell cell differentiation" EXACT [OBOL:automatic] synonym: "IM cell differentiation" EXACT [OBOL:automatic] ! seconds spent parsing GO:0048392: 13.51 ! parse: GO:0048393 using "intermediate mesoderm cell fate commitment" => cdef(GO:0045165, [OBO_REL:results_in_commitment_to=CL:0000000, OBO_REL:unfolds_in=ZFA:0001206]) [-3] ! no existing xp def ! def: "The process by which the developmental fate of a cell becomes restricted such that it will develop into an intermediate mesoderm cell." ! PROPOSED: cell fate commitment that OBO_REL:results_in_commitment_to cell and OBO_REL:unfolds_in intermediate mesoderm [cdef(GO:0045165, [OBO_REL:results_in_commitment_to=CL:0000000, OBO_REL:unfolds_in=ZFA:0001206])] [Term] id: GO:0048393 ! intermediate mesodermal cell fate commitment intersection_of: GO:0045165 ! cell fate commitment intersection_of: OBO_REL:results_in_commitment_to CL:0000000 ! cell intersection_of: OBO_REL:unfolds_in ZFA:0001206 ! intermediate mesoderm synonym: "IM cell cell fate commitment" EXACT [OBOL:automatic] synonym: "IM cell commitment" EXACT [OBOL:automatic] synonym: "IM cell fate commitment" EXACT [OBOL:automatic] synonym: "IM cell lineage commitment" EXACT [OBOL:automatic] ! seconds spent parsing GO:0048393: 13.55 ! parse: GO:0048394 using "intermediate mesoderm cell fate determination" => cdef(GO:0001709, [OBO_REL:results_in_determination_to=CL:0000000, OBO_REL:unfolds_in=ZFA:0001206]) [-3] ! no existing xp def ! def: "Process by which a cell becomes capable of differentiating autonomously into a intermediate mesoderm cell regardless of its environment; upon determination, the cell fate cannot be reversed." ! PROPOSED: cell fate determination that OBO_REL:results_in_determination_to cell and OBO_REL:unfolds_in intermediate mesoderm [cdef(GO:0001709, [OBO_REL:results_in_determination_to=CL:0000000, OBO_REL:unfolds_in=ZFA:0001206])] [Term] id: GO:0048394 ! intermediate mesodermal cell fate determination intersection_of: GO:0001709 ! cell fate determination intersection_of: OBO_REL:results_in_determination_to CL:0000000 ! cell intersection_of: OBO_REL:unfolds_in ZFA:0001206 ! intermediate mesoderm synonym: "IM cell cell fate determination" EXACT [OBOL:automatic] synonym: "IM cell determination" EXACT [OBOL:automatic] synonym: "IM cell fate determination" EXACT [OBOL:automatic] synonym: "IM cell lineage determination" EXACT [OBOL:automatic] ! seconds spent parsing GO:0048394: 13.43 ! parse: GO:0048398 using "intermediate mesoderm cell fate specification" => cdef(GO:0001708, [OBO_REL:results_in_specification_of=CL:0000000, OBO_REL:unfolds_in=ZFA:0001206]) [-3] ! no existing xp def ! def: "Process by which a cell becomes capable of differentiating autonomously into an intermediate mesoderm cell in an environment that is neutral with respect to the developmental pathway; upon specification, the cell fate can be reversed." ! PROPOSED: cell fate specification that OBO_REL:results_in_specification_of cell and OBO_REL:unfolds_in intermediate mesoderm [cdef(GO:0001708, [OBO_REL:results_in_specification_of=CL:0000000, OBO_REL:unfolds_in=ZFA:0001206])] [Term] id: GO:0048398 ! intermediate mesodermal cell fate specification intersection_of: GO:0001708 ! cell fate specification intersection_of: OBO_REL:results_in_specification_of CL:0000000 ! cell intersection_of: OBO_REL:unfolds_in ZFA:0001206 ! intermediate mesoderm synonym: "IM cell cell fate specification" EXACT [OBOL:automatic] synonym: "IM cell fate specification" EXACT [OBOL:automatic] synonym: "IM cell specification" EXACT [OBOL:automatic] ! seconds spent parsing GO:0048398: 13.36 ! parse: GO:0048402 using "intermediate mesoderm structural organization" => cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=ZFA:0001206]) [-2] ! no existing xp def ! def: "The process that contributes to the act of creating the structural organization of the intermediate mesoderm. This process pertains to the physical shaping of a rudimentary structure." ! PROPOSED: organization of an anatomical structure that OBO_REL:results_in_developmental_progression_of intermediate mesoderm [cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=ZFA:0001206])] [Term] id: GO:0048402 ! intermediate mesoderm structural organization intersection_of: GO:0048532 ! organization of an anatomical structure intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0001206 ! intermediate mesoderm synonym: "IM anatomical structure organization" EXACT [OBOL:automatic] synonym: "IM organization of an anatomical structure" EXACT [OBOL:automatic] synonym: "IM structural organization" EXACT [OBOL:automatic] ! seconds spent parsing GO:0048402: 10.22 ! parse: GO:0048439 using "flower morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=PO:0009046]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of the flower are generated and organized. Morphogenesis pertains to the creation of form." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of flower [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=PO:0009046])] [Term] id: GO:0048439 ! flower morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of PO:0009046 ! flower ! seconds spent parsing GO:0048439: 5.2 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0048440 using "carpel development" => cdef(GO:0032502, [results_in_complete_developmental_of=PO:0009030]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the carpel over time, from its formation to the mature structure. A carpel is an organ (generally believed to be a modified foliar unit) at the centre of a flower, bearing one or more ovules and having its margins fused together or with other carpels to enclose the ovule in an ovary, and consisting also of a stigma and usually a style." ! PROPOSED: developmental process that results_in_complete_developmental_of carpel [cdef(GO:0032502, [results_in_complete_developmental_of=PO:0009030])] [Term] id: GO:0048440 ! carpel development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of PO:0009030 ! carpel ! seconds spent parsing GO:0048440: 4.77 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0048441 using "petal development" => cdef(GO:0032502, [results_in_complete_developmental_of=PO:0009032]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the petal over time, from its formation to the mature structure." ! PROPOSED: developmental process that results_in_complete_developmental_of petal [cdef(GO:0032502, [results_in_complete_developmental_of=PO:0009032])] [Term] id: GO:0048441 ! petal development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of PO:0009032 ! petal ! seconds spent parsing GO:0048441: 4.8 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0048442 using "sepal development" => cdef(GO:0032502, [results_in_complete_developmental_of=PO:0009031]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the sepal over time, from its formation to the mature structure." ! PROPOSED: developmental process that results_in_complete_developmental_of sepal [cdef(GO:0032502, [results_in_complete_developmental_of=PO:0009031])] [Term] id: GO:0048442 ! sepal development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of PO:0009031 ! sepal ! seconds spent parsing GO:0048442: 4.77 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0048443 using "stamen development" => cdef(GO:0032502, [results_in_complete_developmental_of=PO:0009029]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the stamen over time, from its formation to the mature structure." ! PROPOSED: developmental process that results_in_complete_developmental_of stamen [cdef(GO:0032502, [results_in_complete_developmental_of=PO:0009029])] [Term] id: GO:0048443 ! stamen development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of PO:0009029 ! stamen ! seconds spent parsing GO:0048443: 4.76 ! parse: GO:0048445 using "carpel morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=PO:0009030]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of the carpel are generated and organized. Morphogenesis pertains to the creation of form." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of carpel [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=PO:0009030])] [Term] id: GO:0048445 ! carpel morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of PO:0009030 ! carpel ! seconds spent parsing GO:0048445: 5.18 ! parse: GO:0048446 using "petal morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=PO:0009032]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of the petal are generated and organized. Morphogenesis pertains to the creation of form." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of petal [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=PO:0009032])] [Term] id: GO:0048446 ! petal morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of PO:0009032 ! petal ! seconds spent parsing GO:0048446: 5.18 ! parse: GO:0048447 using "sepal morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=PO:0009031]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of the sepal are generated and organized. Morphogenesis pertains to the creation of form." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of sepal [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=PO:0009031])] [Term] id: GO:0048447 ! sepal morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of PO:0009031 ! sepal ! seconds spent parsing GO:0048447: 5.18 ! parse: GO:0048448 using "stamen morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=PO:0009029]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of the stamen are generated and organized. Morphogenesis pertains to the creation of form." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of stamen [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=PO:0009029])] [Term] id: GO:0048448 ! stamen morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of PO:0009029 ! stamen ! seconds spent parsing GO:0048448: 5.22 ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0048451 using "petal formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=PO:0009032]) [-2] ! parse: GO:0048451 using "petal formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=PO:0009032]) [-2] ! no existing xp def ! def: "The process that gives rise to the petal. This process pertains to the initial formation of a structure from unspecified parts." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of petal [cdef(GO:0048646, [OBO_REL:results_in_formation_of=PO:0009032])] [Term] id: GO:0048451 ! petal formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of PO:0009032 ! petal ! seconds spent parsing GO:0048451: 5.3 ! parse: GO:0048452 using "petal structural organization" => cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=PO:0009032]) [-2] ! no existing xp def ! def: "The process that contributes to the act of creating the structural organization of the petal. This process pertains to the physical shaping of a rudimentary structure." ! PROPOSED: organization of an anatomical structure that OBO_REL:results_in_developmental_progression_of petal [cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=PO:0009032])] [Term] id: GO:0048452 ! petal structural organization intersection_of: GO:0048532 ! organization of an anatomical structure intersection_of: OBO_REL:results_in_developmental_progression_of PO:0009032 ! petal ! seconds spent parsing GO:0048452: 10.02 ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0048453 using "sepal formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=PO:0009031]) [-2] ! parse: GO:0048453 using "sepal formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=PO:0009031]) [-2] ! no existing xp def ! def: "The process that gives rise to the sepal. This process pertains to the initial formation of a structure from unspecified parts." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of sepal [cdef(GO:0048646, [OBO_REL:results_in_formation_of=PO:0009031])] [Term] id: GO:0048453 ! sepal formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of PO:0009031 ! sepal ! seconds spent parsing GO:0048453: 5.24 ! parse: GO:0048454 using "sepal structural organization" => cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=PO:0009031]) [-2] ! no existing xp def ! def: "The process that contributes to the act of creating the structural organization of the sepal. This process pertains to the physical shaping of a rudimentary structure." ! PROPOSED: organization of an anatomical structure that OBO_REL:results_in_developmental_progression_of sepal [cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=PO:0009031])] [Term] id: GO:0048454 ! sepal structural organization intersection_of: GO:0048532 ! organization of an anatomical structure intersection_of: OBO_REL:results_in_developmental_progression_of PO:0009031 ! sepal ! seconds spent parsing GO:0048454: 10.0 ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0048455 using "stamen formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=PO:0009029]) [-2] ! parse: GO:0048455 using "stamen formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=PO:0009029]) [-2] ! no existing xp def ! def: "The process that contributes to the act of giving rise to the stamen. This process pertains to the initial formation of a structure from unspecified parts." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of stamen [cdef(GO:0048646, [OBO_REL:results_in_formation_of=PO:0009029])] [Term] id: GO:0048455 ! stamen formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of PO:0009029 ! stamen ! seconds spent parsing GO:0048455: 5.28 ! parse: GO:0048456 using "stamen structural organization" => cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=PO:0009029]) [-2] ! no existing xp def ! def: "The process that contributes to the act of creating the structural organization of the stamen. This process pertains to the physical shaping of a rudimentary structure." ! PROPOSED: organization of an anatomical structure that OBO_REL:results_in_developmental_progression_of stamen [cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=PO:0009029])] [Term] id: GO:0048456 ! stamen structural organization intersection_of: GO:0048532 ! organization of an anatomical structure intersection_of: OBO_REL:results_in_developmental_progression_of PO:0009029 ! stamen ! seconds spent parsing GO:0048456: 10.01 ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0048460 using "flower formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=PO:0009046]) [-2] ! parse: GO:0048460 using "flower formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=PO:0009046]) [-2] ! no existing xp def ! def: "The process that gives rise to the flower. This process pertains to the initial formation of a structure from unspecified parts." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of flower [cdef(GO:0048646, [OBO_REL:results_in_formation_of=PO:0009046])] [Term] id: GO:0048460 ! flower formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of PO:0009046 ! flower ! seconds spent parsing GO:0048460: 5.25 ! parse: GO:0048461 using "flower structural organization" => cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=PO:0009046]) [-2] ! no existing xp def ! def: "The process that contributes to the act of creating the structural organization of the flower. This process pertains to the physical shaping of a rudimentary structure." ! PROPOSED: organization of an anatomical structure that OBO_REL:results_in_developmental_progression_of flower [cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=PO:0009046])] [Term] id: GO:0048461 ! flower structural organization intersection_of: GO:0048532 ! organization of an anatomical structure intersection_of: OBO_REL:results_in_developmental_progression_of PO:0009046 ! flower ! seconds spent parsing GO:0048461: 10.03 ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0048462 using "carpel formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=PO:0009030]) [-2] ! parse: GO:0048462 using "carpel formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=PO:0009030]) [-2] ! no existing xp def ! def: "The process that gives rise to the carpel. This process pertains to the initial formation of a structure from unspecified parts." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of carpel [cdef(GO:0048646, [OBO_REL:results_in_formation_of=PO:0009030])] [Term] id: GO:0048462 ! carpel formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of PO:0009030 ! carpel ! seconds spent parsing GO:0048462: 5.25 ! parse: GO:0048463 using "carpel structural organization" => cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=PO:0009030]) [-2] ! no existing xp def ! def: "The process that contributes to the act of creating the structural organization of the carpel. This process pertains to the physical shaping of a rudimentary structure." ! PROPOSED: organization of an anatomical structure that OBO_REL:results_in_developmental_progression_of carpel [cdef(GO:0048532, [OBO_REL:results_in_developmental_progression_of=PO:0009030])] [Term] id: GO:0048463 ! carpel structural organization intersection_of: GO:0048532 ! organization of an anatomical structure intersection_of: OBO_REL:results_in_developmental_progression_of PO:0009030 ! carpel ! seconds spent parsing GO:0048463: 10.06 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0048464 using "calyx development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00003685]) [-2] ! parse: GO:0048464 using "calyx development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00004918]) [-2] ! parse: GO:0048464 using "calyx development" => cdef(GO:0032502, [results_in_complete_developmental_of=PO:0009060]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the calyx over time, from its formation to the mature structure." ! PROPOSED: developmental process that results_in_complete_developmental_of calyx [cdef(GO:0032502, [results_in_complete_developmental_of=PO:0009060])] [Term] id: GO:0048464 ! calyx development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of PO:0009060 ! calyx ! seconds spent parsing GO:0048464: 6.1 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0048465 using "corolla development" => cdef(GO:0032502, [results_in_complete_developmental_of=PO:0009059]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the corolla over time, from its formation to the mature structure." ! PROPOSED: developmental process that results_in_complete_developmental_of corolla [cdef(GO:0032502, [results_in_complete_developmental_of=PO:0009059])] [Term] id: GO:0048465 ! corolla development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of PO:0009059 ! corolla ! seconds spent parsing GO:0048465: 4.79 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0048466 using "androecium development" => cdef(GO:0032502, [results_in_complete_developmental_of=PO:0009061]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the androecium over time, from its formation to the mature structure." ! PROPOSED: developmental process that results_in_complete_developmental_of androecium [cdef(GO:0032502, [results_in_complete_developmental_of=PO:0009061])] [Term] id: GO:0048466 ! androecium development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of PO:0009061 ! androecium ! seconds spent parsing GO:0048466: 4.8 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0048467 using "gynoecium development" => cdef(GO:0032502, [results_in_complete_developmental_of=PO:0009062]) [-2] ! parse: GO:0048467 using "pistil development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(pistil, anatomy)]) [-7] ! no existing xp def ! def: "The process whose specific outcome is the progression of the gynoecium over time, from its formation to the mature structure. The gynoecium is the collective name for the carpels of a flower." ! PROPOSED: developmental process that results_in_complete_developmental_of gynoecium [cdef(GO:0032502, [results_in_complete_developmental_of=PO:0009062])] [Term] id: GO:0048467 ! gynoecium development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of PO:0009062 ! gynoecium ! seconds spent parsing GO:0048467: 9.0 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0048468 using "cell development" => cdef(GO:0032502, [results_in_complete_developmental_of=CL:0000000]) [-2] ! parse: GO:0048468 using "cell development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0009000]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a specific fate." ! PROPOSED: developmental process that results_in_complete_developmental_of cell [cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0009000])] [Term] id: GO:0048468 ! cell development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of ZFA:0009000 ! cell ! seconds spent parsing GO:0048468: 6.99 ! parse: GO:0048469 using "cell maturation" => cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=CL:0000000]) [-2] ! parse: GO:0048469 using "cell maturation" => cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=ZFA:0009000]) [-2] ! no existing xp def ! def: "A developmental process, independent of morphogenetic (shape) change, that is required for a cell to attain its fully functional state." ! PROPOSED: developmental maturation that OBO_REL:results_in_developmental_progression_of cell [cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=ZFA:0009000])] [Term] id: GO:0048469 ! cell maturation intersection_of: GO:0021700 ! developmental maturation intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0009000 ! cell ! seconds spent parsing GO:0048469: 7.01 ! No parse for: GO:0048478 replication fork protection ! No relation defined: results_in_complete_developmental_of ! parse: GO:0048479 using "style development" => cdef(GO:0032502, [results_in_complete_developmental_of=PO:0009074]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the style over time, from its formation to the mature structure. The style is an elongated part of a carpel, or group of fused carpels, and it lies between the ovary and the stigma." ! PROPOSED: developmental process that results_in_complete_developmental_of style [cdef(GO:0032502, [results_in_complete_developmental_of=PO:0009074])] [Term] id: GO:0048479 ! style development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of PO:0009074 ! style ! seconds spent parsing GO:0048479: 4.84 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0048480 using "stigma development" => cdef(GO:0032502, [results_in_complete_developmental_of=PO:0009073]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the stigma over time, from its formation to the mature structure. The stigma is the pollen-receptive surface of a carpel or group of fused carpels, usually sticky." ! PROPOSED: developmental process that results_in_complete_developmental_of stigma [cdef(GO:0032502, [results_in_complete_developmental_of=PO:0009073])] [Term] id: GO:0048480 ! stigma development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of PO:0009073 ! stigma ! seconds spent parsing GO:0048480: 4.79 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0048481 using "ovule development" => cdef(GO:0032502, [results_in_complete_developmental_of=PO:0020003]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the ovule over time, from its formation to the mature structure. The ovule is the structure in seed plants enclosing the female gametophyte, and is composed of the nucellus, one or two integuments, and the funiculus; it develops into the seed." ! PROPOSED: developmental process that results_in_complete_developmental_of ovule [cdef(GO:0032502, [results_in_complete_developmental_of=PO:0020003])] [Term] id: GO:0048481 ! ovule development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of PO:0020003 ! ovule ! seconds spent parsing GO:0048481: 4.78 ! parse: GO:0048482 using "ovule morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=PO:0020003]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of the ovule are generated and organized. Morphogenesis pertains to the creation of form. The ovule is the structure in seed plants enclosing the female gametophyte, and is composed of the nucellus, one or two integuments, and the funiculus; it develops into the seed." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of ovule [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=PO:0020003])] [Term] id: GO:0048482 ! ovule morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of PO:0020003 ! ovule ! seconds spent parsing GO:0048482: 5.19 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0048483 using "autonomic nervous system development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000219]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the autonomic nervous system over time, from its formation to the mature structure. The autonomic nervous system is composed of neurons that are not under conscious control, and is comprised of two antagonistic components, the sympathetic and parasympathetic nervous systems. The autonomic nervous system regulates key functions including the activity of the cardiac (heart) muscle, smooth muscles (e.g. of the gut), and glands." ! PROPOSED: developmental process that results_in_complete_developmental_of autonomic nervous system [cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000219])] [Term] id: GO:0048483 ! autonomic nervous system development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of MA:0000219 ! autonomic nervous system ! seconds spent parsing GO:0048483: 4.97 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0048484 using "enteric nervous system development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000222]) [-2] ! parse: GO:0048484 using "enteric nervous system development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0001155]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the enteric nervous system over time, from its formation to the mature structure. The enteric nervous system is composed of two ganglionated neural plexuses in the gut wall which form one of the three major divisions of the autonomic nervous system. The enteric nervous system innervates the gastrointestinal tract, the pancreas, and the gall bladder. It contains sensory neurons, interneurons, and motor neurons. Thus the circuitry can autonomously sense the tension and the chemical environment in the gut and regulate blood vessel tone, motility, secretions, and fluid transport. The system is itself governed by the central nervous system and receives both parasympathetic and sympathetic innervation." ! PROPOSED: developmental process that results_in_complete_developmental_of enteric nervous system [cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0001155])] [Term] id: GO:0048484 ! enteric nervous system development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of ZFA:0001155 ! enteric nervous system ! seconds spent parsing GO:0048484: 5.63 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0048485 using "sympathetic nervous system development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000225]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the sympathetic nervous system over time, from its formation to the mature structure. The sympathetic nervous system is one of the two divisions of the vertebrate autonomic nervous system (the other being the parasympathetic nervous system). The sympathetic preganglionic neurons have their cell bodies in the thoracic and lumbar regions of the spinal cord and connect to the paravertebral chain of sympathetic ganglia. Innervate heart and blood vessels, sweat glands, viscera and the adrenal medulla. Most sympathetic neurons, but not all, use noradrenaline as a post-ganglionic neurotransmitter." ! PROPOSED: developmental process that results_in_complete_developmental_of sympathetic nervous system [cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000225])] [Term] id: GO:0048485 ! sympathetic nervous system development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of MA:0000225 ! sympathetic nervous system ! seconds spent parsing GO:0048485: 4.99 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0048486 using "parasympathetic nervous system development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000223]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the parasympathetic nervous system over time, from its formation to the mature structure. The parasympathetic nervous system is one of the two divisions of the vertebrate autonomic nervous system. Parasympathetic nerves emerge cranially as pre ganglionic fibers from oculomotor, facial, glossopharyngeal and vagus and from the sacral region of the spinal cord. Most neurons are cholinergic and responses are mediated by muscarinic receptors. The parasympathetic system innervates, for example: salivary glands, thoracic and abdominal viscera, bladder and genitalia." ! PROPOSED: developmental process that results_in_complete_developmental_of parasympathetic nervous system [cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000223])] [Term] id: GO:0048486 ! parasympathetic nervous system development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of MA:0000223 ! parasympathetic nervous system ! seconds spent parsing GO:0048486: 4.98 ! parse: GO:0048488 using "synaptic vesicle endocytosis" => cdef(GO:0006897, [OBO_REL:results_in_transport_of=GO:0008021]) [-2] ! no existing xp def ! def: "Invagination of the axonal plasma membrane creating a membrane bound vesicle. Without this process the presynaptic terminal would swell up due to fusion of vesicle membranes during neurotransmitter release. The vesicles created may subsequently be used for neurotransmitter storage/release." ! PROPOSED: endocytosis that OBO_REL:results_in_transport_of synaptic vesicle [cdef(GO:0006897, [OBO_REL:results_in_transport_of=GO:0008021])] [Term] id: GO:0048488 ! synaptic vesicle endocytosis intersection_of: GO:0006897 ! endocytosis intersection_of: OBO_REL:results_in_transport_of GO:0008021 ! synaptic vesicle ! seconds spent parsing GO:0048488: 6.4 ! parse: GO:0048489 using "synaptic vesicle transport" => cdef(GO:0006810, [OBO_REL:results_in_transport_of=GO:0008021]) [-2] ! no existing xp def ! def: "The directed movement of substances in synaptic membrane-bound vesicles within the neuron along the cytoskeleton either toward or away from the neuronal cell body." ! PROPOSED: transport that OBO_REL:results_in_transport_of synaptic vesicle [cdef(GO:0006810, [OBO_REL:results_in_transport_of=GO:0008021])] [Term] id: GO:0048489 ! synaptic vesicle transport intersection_of: GO:0006810 ! transport intersection_of: OBO_REL:results_in_transport_of GO:0008021 ! synaptic vesicle ! seconds spent parsing GO:0048489: 6.24 ! parse: GO:0048499 using "synaptic vesicle membrane organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0016020, OBO_REL:unfolds_in=GO:0008021]) [-3] ! parse: GO:0048499 using "synaptic vesicle membrane organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0030672]) [-2] ! parse: GO:0048499 using "synaptic vesicle membrane organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=cdef(GO:0016020, [OBO_REL:part_of=GO:0008021])]) [-3] ! no existing xp def ! def: "A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the membrane surrounding a synaptic vesicle." ! PROPOSED: cellular component organization and biogenesis that OBO_REL:results_in_structural_change_to synaptic vesicle membrane [cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0030672])] [Term] id: GO:0048499 ! synaptic vesicle membrane organization and biogenesis intersection_of: GO:0016043 ! cellular component organization and biogenesis intersection_of: OBO_REL:results_in_structural_change_to GO:0030672 ! synaptic vesicle membrane synonym: "synaptic vesicle membrane organization" EXACT [OBOL:automatic] ! seconds spent parsing GO:0048499: 19.51 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0048507 using "meristem development" => cdef(GO:0032502, [results_in_complete_developmental_of=PO:0009013]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the meristem over time, from its formation to the mature structure." ! PROPOSED: developmental process that results_in_complete_developmental_of meristem [cdef(GO:0032502, [results_in_complete_developmental_of=PO:0009013])] [Term] id: GO:0048507 ! meristem development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of PO:0009013 ! meristem ! seconds spent parsing GO:0048507: 4.8 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0048508 using "embryonic meristem development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(embryonic meristem, anatomy)]) [-19] ! parse: GO:0048508 using "embryonic meristem development" => cdef(GO:0048507, [OBO_REL:part_of=GO:0009790]) [-2] ! parse: GO:0048508 using "embryonic meristem development" => cdef(GO:0048507, [OBO_REL:results_in_developmental_progression_of=anon(embryonic, anatomy)]) [-10] ! parse: GO:0048508 using "embryonic meristem development" => cdef(cdef(GO:0032502, [results_in_complete_developmental_of=PO:0009013]), [OBO_REL:part_of=GO:0009790]) [-3] ! no existing xp def ! def: "The process whose specific outcome is the progression of the embryonic meristem over time, from its formation to the mature structure." ! PROPOSED: meristem development that OBO_REL:part_of embryonic development [cdef(GO:0048507, [OBO_REL:part_of=GO:0009790])] [Term] id: GO:0048508 ! embryonic meristem development intersection_of: GO:0048507 ! meristem development intersection_of: OBO_REL:part_of GO:0009790 ! embryonic development synonym: "embryogenesis, meristem development" EXACT [OBOL:automatic] synonym: "embryonal development, meristem development" EXACT [OBOL:automatic] synonym: "embryonic development, meristem development" EXACT [OBOL:automatic] def: "A meristem development that is part of a embryogenesis" [OBOL:automatic] ! seconds spent parsing GO:0048508: 4.63 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0048513 using "organ development" => cdef(GO:0032502, [results_in_complete_developmental_of=PO:0009008]) [-2] ! parse: GO:0048513 using "organ development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000496]) [-2] ! no existing xp def ! def: "Development of a tissue or tissues that work together to perform a specific function or functions. Development pertains to the process whose specific outcome is the progression of a structure over time, from its formation to the mature structure. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions." ! PROPOSED: developmental process that results_in_complete_developmental_of compound organ [cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000496])] [Term] id: GO:0048513 ! organ development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of ZFA:0000496 ! compound organ synonym: "compound organ development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0048513: 13.99 ! parse: GO:0048514 using "blood vessel morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000060]) [-2] ! parse: GO:0048514 using "blood vessel morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(vessel, anatomy), OBO_REL:unfolds_in=MA:0000059]) [-8] ! parse: GO:0048514 using "blood vessel morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(vessel, anatomy), OBO_REL:unfolds_in=ZFA:0000007]) [-8] ! no existing xp def ! def: "The process by which the anatomical structures of blood vessels are generated and organized. Morphogenesis pertains to the creation of form. The blood vessel is the vasculature carrying blood." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of blood vessel [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000060])] [Term] id: GO:0048514 ! blood vessel morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of MA:0000060 ! blood vessel synonym: "vasculature anatomical structure morphogenesis" EXACT [OBOL:automatic] synonym: "vasculature morphogenesis" EXACT [OBOL:automatic] ! seconds spent parsing GO:0048514: 10.52 ! Already have xp for: GO:0048515 spermatid differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of spermatid [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000018])] ! No parse for: GO:0048526 imaginal disc-derived wing expansion ! No relation defined: results_in_complete_developmental_of ! parse: GO:0048527 using "lateral root development" => cdef(GO:0032502, [results_in_complete_developmental_of=PO:0020121]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the lateral root over time, from its formation to the mature structure. A lateral root is one formed from pericycle cells located on the xylem radius of the root, as opposed to the initiation of the main root from the embryo proper." ! PROPOSED: developmental process that results_in_complete_developmental_of lateral root [cdef(GO:0032502, [results_in_complete_developmental_of=PO:0020121])] [Term] id: GO:0048527 ! lateral root development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of PO:0020121 ! lateral root ! seconds spent parsing GO:0048527: 5.16 ! parse: GO:0048530 using "fruit morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=PO:0009001]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of a fruit are generated and organized. Morphogenesis pertains to the creation of form. A fruit is a reproductive body of a seed plant." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of fruit [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=PO:0009001])] [Term] id: GO:0048530 ! fruit morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of PO:0009001 ! fruit ! seconds spent parsing GO:0048530: 5.33 ! No parse for: GO:0048532 organization of an anatomical structure ! parse: GO:0048533 using "sporocyte differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(sporocyte, cell)]) [-10] ! parse: GO:0048533 using "sporocyte morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=PO:0006204]) [-2] ! no existing xp def ! def: "The process whereby a relatively unspecialized floral cell acquires the specialized features of a sporocyte. Sporocytes are the haploid spores of angiosperms. Once formed, they undergo meiotic divisions to form microspores and megaspores." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of sporocyte [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=PO:0006204])] [Term] id: GO:0048533 ! sporocyte differentiation intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of PO:0006204 ! sporocyte ! seconds spent parsing GO:0048533: 10.02 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0048535 using "lymph node development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000139]) [-2] ! parse: GO:0048535 using "lymph node development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(node, anatomy), OBO_REL:unfolds_in=MA:0002520]) [-6] ! no existing xp def ! def: "The process whose specific outcome is the progression of lymph nodes over time, from their formation to the mature structure. A lymph node is a round, oval, or bean shaped structure localized in clusters along the lymphatic vessels, with a distinct internal structure including specialized vasculature and B- and T-zones for the activation of lymphocytes." ! PROPOSED: developmental process that results_in_complete_developmental_of lymph node [cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000139])] [Term] id: GO:0048535 ! lymph node development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of MA:0000139 ! lymph node ! seconds spent parsing GO:0048535: 19.91 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0048536 using "spleen development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000141]) [-2] ! parse: GO:0048536 using "spleen development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000436]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the spleen over time, from its formation to the mature structure. The spleen is a large vascular lymphatic organ composed of white and red pulp, involved both in hemopoietic and immune system functions." ! PROPOSED: developmental process that results_in_complete_developmental_of spleen [cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000436])] [Term] id: GO:0048536 ! spleen development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of ZFA:0000436 ! spleen ! seconds spent parsing GO:0048536: 5.43 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0048537 using "mucosal-associated lymphoid tissue development" => cdef(GO:0009888, [OBO_REL:results_in_developmental_progression_of=anon(mucosal-associated lymphoid, anatomy)]) [-28] ! parse: GO:0048537 using "mucosal-associated lymphoid tissue development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(mucosal-associated lymphoid tissue, anatomy)]) [-35] ! no existing xp def ! def: "The process whose specific outcome is the progression of mucosal- associated lymphoid tissue over time, from its formation to the mature structure. Mucosal-associated lymphoid tissue is typically found as nodules associated with mucosal epithelia with distinct internal structures including B- and T-zones for the activation of lymphocytes." ! PROPOSED: tissue development that OBO_REL:results_in_developmental_progression_of anon(mucosal-associated lymphoid, anatomy) [cdef(GO:0009888, [OBO_REL:results_in_developmental_progression_of=anon(mucosal-associated lymphoid, anatomy)])] [Term] id: GO:0048537 ! mucosal-associated lymphoid tissue development intersection_of: GO:0009888 ! tissue development intersection_of: OBO_REL:results_in_developmental_progression_of anatomy:mucosal_-_associated_lymphoid synonym: "mucosal-associated lymphoid histogenesis" EXACT [OBOL:automatic] ! seconds spent parsing GO:0048537: 4.63 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0048538 using "thymus development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000142]) [-2] ! parse: GO:0048538 using "thymus development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0001078]) [-2] ! parse: GO:0048538 using "thymus development" => cdef(GO:0032502, [results_in_complete_developmental_of=cell:thymus]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the thymus over time, from its formation to the mature structure. The thymus is a symmetric bi-lobed organ involved primarily in the differentiation of immature to mature T cells, with unique vascular, nervous, epithelial, and lymphoid cell components." ! PROPOSED: developmental process that results_in_complete_developmental_of thymus [cdef(GO:0032502, [results_in_complete_developmental_of=cell:thymus])] [Term] id: GO:0048538 ! thymus development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of cell:thymus ! thymus ! seconds spent parsing GO:0048538: 6.57 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0048539 using "bone marrow development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000134]) [-2] ! parse: GO:0048539 using "bone marrow development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(marrow, anatomy), OBO_REL:unfolds_in=MA:0001459]) [-8] ! no existing xp def ! def: "The process whose specific outcome is the progression of the bone marrow over time, from its formation to the mature structure." ! PROPOSED: developmental process that results_in_complete_developmental_of bone marrow [cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000134])] [Term] id: GO:0048539 ! bone marrow development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of MA:0000134 ! bone marrow ! seconds spent parsing GO:0048539: 9.35 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0048541 using "GALT development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000136]) [-2] ! parse: GO:0048541 using "Peyer's patch development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(Peyer ' s patch, anatomy)]) [-16] ! parse: GO:0048541 using "gut-associated lymphoid tissue development" => cdef(GO:0009888, [OBO_REL:results_in_developmental_progression_of=anon(- associated lymphoid, anatomy), OBO_REL:unfolds_in=MA:0000917]) [-23] ! parse: GO:0048541 using "gut-associated lymphoid tissue development" => cdef(GO:0009888, [OBO_REL:results_in_developmental_progression_of=anon(- associated lymphoid, anatomy), OBO_REL:unfolds_in=ZFA:0000112]) [-23] ! parse: GO:0048541 using "gut-associated lymphoid tissue development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(- associated lymphoid tissue, anatomy), OBO_REL:unfolds_in=MA:0000917]) [-30] ! parse: GO:0048541 using "gut-associated lymphoid tissue development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(- associated lymphoid tissue, anatomy), OBO_REL:unfolds_in=ZFA:0000112]) [-30] ! no existing xp def ! def: "The process whose specific outcome is the progression of Peyer's patches over time, from their formation to the mature structure. Peyer's patches are typically found as nodules associated with gut epithelium with distinct internal structures including B- and T-zones for the activation of lymphocytes." ! PROPOSED: developmental process that results_in_complete_developmental_of gut associated lymphoid tissue [cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000136])] [Term] id: GO:0048541 ! Peyer's patch development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of MA:0000136 ! gut associated lymphoid tissue synonym: "gut associated lymphoid tissue development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0048541: 20.23 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0048542 using "lymph gland development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00001668]) [-2] ! parse: GO:0048542 using "lymph gland development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(gland, anatomy), OBO_REL:unfolds_in=MA:0002520]) [-7] ! parse: GO:0048542 using "lymph gland development" => cdef(GO:0048732, [OBO_REL:results_in_developmental_progression_of=MA:0002520]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the lymph gland over time, from its formation to the mature structure. The lymph gland is one of the sites of hemocyte differentiation. It consists of three to six bilaterally paired lobes that are attached to the cardioblasts during larval stages, and it degenerates during pupal stages." ! PROPOSED: gland development that OBO_REL:results_in_developmental_progression_of lymph [cdef(GO:0048732, [OBO_REL:results_in_developmental_progression_of=MA:0002520])] [Term] id: GO:0048542 ! lymph gland development intersection_of: GO:0048732 ! gland development intersection_of: OBO_REL:results_in_developmental_progression_of MA:0002520 ! lymph ! seconds spent parsing GO:0048542: 21.33 ! parse: GO:0048544 using "pollen recognition" => cdef(GO:0008037, [OBO_REL:has_agent=CL:0000252]) [-2] ! parse: GO:0048544 using "pollen recognition" => cdef(GO:0008037, [OBO_REL:has_agent=cell:pollen]) [-2] ! no existing xp def ! def: "The process, involving the sharing and interaction of the single locus incompatibility haplotypes, involved in the recognition or rejection of the self pollen by cells in the stigma. This process ensures out-breeding in certain plant species." ! PROPOSED: cell recognition that OBO_REL:has_agent pollen [cdef(GO:0008037, [OBO_REL:has_agent=cell:pollen])] [Term] id: GO:0048544 ! recognition or rejection of self pollen intersection_of: GO:0008037 ! cell recognition intersection_of: OBO_REL:has_agent cell:pollen ! pollen def: "cell recognition A GO:0008037 by which a cell:pollen recognizes its surroundings" [OBOL:automatic] ! seconds spent parsing GO:0048544: 14.48 ! Already have xp for: GO:0048546 digestive tract morphogenesis ! CURRENT : tube morphogenesis that OBO_REL:part_of digestion [cdef(GO:0035239, [OBO_REL:part_of=GO:0007586])] ! parse: GO:0048547 using "gut morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000917]) [-2] ! parse: GO:0048547 using "gut morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0000112]) [-2] ! parse: GO:0048547 using "intestinal morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(intestinal, anatomy)]) [-11] ! no existing xp def ! def: "The process by which the anatomical structures of the gut are generated and organized. The gut is the region of the digestive tract extending from the beginning of the intestines to the anus." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of gut [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0000112])] [Term] id: GO:0048547 ! gut morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0000112 ! gut synonym: "alimentary canal anatomical structure morphogenesis" EXACT [OBOL:automatic] synonym: "alimentary canal morphogenesis" EXACT [OBOL:automatic] synonym: "gut tube anatomical structure morphogenesis" EXACT [OBOL:automatic] synonym: "gut tube morphogenesis" EXACT [OBOL:automatic] ! seconds spent parsing GO:0048547: 10.57 ! parse: GO:0048557 using "embryonic digestive tract morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(embryonic digestive tract, anatomy)]) [-26] ! parse: GO:0048557 using "embryonic digestive tract morphogenesis" => cdef(GO:0048546, [OBO_REL:part_of=GO:0009790]) [-2] ! parse: GO:0048557 using "embryonic digestive tract morphogenesis" => cdef(GO:0048546, [OBO_REL:results_in_developmental_progression_of=anon(embryonic, anatomy)]) [-10] ! parse: GO:0048557 using "embryonic digestive tract morphogenesis" => cdef(cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(digestive tract, anatomy)]), [OBO_REL:part_of=GO:0009790]) [-17] ! parse: GO:0048557 using "embryonic digestive tract morphogenesis" => cdef(cdef(cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00005100]), [OBO_REL:part_of=GO:0007586]), [OBO_REL:part_of=GO:0009790]) [-4] ! no existing xp def ! def: "The process by which the anatomical structures of the digestive tract are generated and organized during embryonic development. The digestive tract is the tube extending from the mouth to the anus, including the pharynx, esophagus, stomach, and intestines." ! PROPOSED: digestive tract morphogenesis that OBO_REL:part_of embryonic development [cdef(GO:0048546, [OBO_REL:part_of=GO:0009790])] [Term] id: GO:0048557 ! embryonic digestive tract morphogenesis intersection_of: GO:0048546 ! digestive tract morphogenesis intersection_of: OBO_REL:part_of GO:0009790 ! embryonic development synonym: "alimentary canal morphogenesis during embryogenesis" EXACT [OBOL:automatic] synonym: "alimentary canal morphogenesis during embryonal development" EXACT [OBOL:automatic] synonym: "alimentary canal morphogenesis during embryonic development" EXACT [OBOL:automatic] synonym: "alimentary canal morphogenesis involved in embryogenesis" EXACT [OBOL:automatic] synonym: "alimentary canal morphogenesis involved in embryonal development" EXACT [OBOL:automatic] synonym: "alimentary canal morphogenesis involved in embryonic development" EXACT [OBOL:automatic] synonym: "alimentary canal morphogenesis of embryogenesis" EXACT [OBOL:automatic] synonym: "alimentary canal morphogenesis of embryonal development" EXACT [OBOL:automatic] synonym: "alimentary canal morphogenesis of embryonic development" EXACT [OBOL:automatic] synonym: "alimentary canal morphogenesis with embryogenesis" EXACT [OBOL:automatic] synonym: "alimentary canal morphogenesis with embryonal development" EXACT [OBOL:automatic] synonym: "alimentary canal morphogenesis with embryonic development" EXACT [OBOL:automatic] synonym: "digestant tube morphogenesis during embryogenesis" EXACT [OBOL:automatic] synonym: "digestant tube morphogenesis during embryonal development" EXACT [OBOL:automatic] synonym: "digestant tube morphogenesis during embryonic development" EXACT [OBOL:automatic] synonym: "digestant tube morphogenesis involved in embryogenesis" EXACT [OBOL:automatic] synonym: "digestant tube morphogenesis involved in embryonal development" EXACT [OBOL:automatic] synonym: "digestant tube morphogenesis involved in embryonic development" EXACT [OBOL:automatic] synonym: "digestant tube morphogenesis of embryogenesis" EXACT [OBOL:automatic] synonym: "digestant tube morphogenesis of embryonal development" EXACT [OBOL:automatic] synonym: "digestant tube morphogenesis of embryonic development" EXACT [OBOL:automatic] synonym: "digestant tube morphogenesis with embryogenesis" EXACT [OBOL:automatic] synonym: "digestant tube morphogenesis with embryonal development" EXACT [OBOL:automatic] synonym: "digestant tube morphogenesis with embryonic development" EXACT [OBOL:automatic] synonym: "digestants tube morphogenesis during embryogenesis" EXACT [OBOL:automatic] synonym: "digestants tube morphogenesis during embryonal development" EXACT [OBOL:automatic] synonym: "digestants tube morphogenesis during embryonic development" EXACT [OBOL:automatic] synonym: "digestants tube morphogenesis involved in embryogenesis" EXACT [OBOL:automatic] synonym: "digestants tube morphogenesis involved in embryonal development" EXACT [OBOL:automatic] synonym: "digestants tube morphogenesis involved in embryonic development" EXACT [OBOL:automatic] synonym: "digestants tube morphogenesis of embryogenesis" EXACT [OBOL:automatic] synonym: "digestants tube morphogenesis of embryonal development" EXACT [OBOL:automatic] synonym: "digestants tube morphogenesis of embryonic development" EXACT [OBOL:automatic] synonym: "digestants tube morphogenesis with embryogenesis" EXACT [OBOL:automatic] synonym: "digestants tube morphogenesis with embryonal development" EXACT [OBOL:automatic] synonym: "digestants tube morphogenesis with embryonic development" EXACT [OBOL:automatic] synonym: "digestive tube morphogenesis during embryogenesis" EXACT [OBOL:automatic] synonym: "digestive tube morphogenesis during embryonal development" EXACT [OBOL:automatic] synonym: "digestive tube morphogenesis during embryonic development" EXACT [OBOL:automatic] synonym: "digestive tube morphogenesis involved in embryogenesis" EXACT [OBOL:automatic] synonym: "digestive tube morphogenesis involved in embryonal development" EXACT [OBOL:automatic] synonym: "digestive tube morphogenesis involved in embryonic development" EXACT [OBOL:automatic] synonym: "digestive tube morphogenesis of embryogenesis" EXACT [OBOL:automatic] synonym: "digestive tube morphogenesis of embryonal development" EXACT [OBOL:automatic] synonym: "digestive tube morphogenesis of embryonic development" EXACT [OBOL:automatic] synonym: "digestive tube morphogenesis with embryogenesis" EXACT [OBOL:automatic] synonym: "digestive tube morphogenesis with embryonal development" EXACT [OBOL:automatic] synonym: "digestive tube morphogenesis with embryonic development" EXACT [OBOL:automatic] synonym: "embryogenesis, alimentary canal morphogenesis" EXACT [OBOL:automatic] synonym: "embryogenesis, digestant tube morphogenesis" EXACT [OBOL:automatic] synonym: "embryogenesis, digestants tube morphogenesis" EXACT [OBOL:automatic] synonym: "embryogenesis, digestive tract morphogenesis" EXACT [OBOL:automatic] synonym: "embryogenesis, digestive tube morphogenesis" EXACT [OBOL:automatic] synonym: "embryogenesis, gastrointestinal tract morphogenesis" EXACT [OBOL:automatic] synonym: "embryonal development, alimentary canal morphogenesis" EXACT [OBOL:automatic] synonym: "embryonal development, digestant tube morphogenesis" EXACT [OBOL:automatic] synonym: "embryonal development, digestants tube morphogenesis" EXACT [OBOL:automatic] synonym: "embryonal development, digestive tract morphogenesis" EXACT [OBOL:automatic] synonym: "embryonal development, digestive tube morphogenesis" EXACT [OBOL:automatic] synonym: "embryonal development, gastrointestinal tract morphogenesis" EXACT [OBOL:automatic] synonym: "embryonic alimentary canal morphogenesis" EXACT [OBOL:automatic] synonym: "embryonic development, alimentary canal morphogenesis" EXACT [OBOL:automatic] synonym: "embryonic development, digestant tube morphogenesis" EXACT [OBOL:automatic] synonym: "embryonic development, digestants tube morphogenesis" EXACT [OBOL:automatic] synonym: "embryonic development, digestive tract morphogenesis" EXACT [OBOL:automatic] synonym: "embryonic development, digestive tube morphogenesis" EXACT [OBOL:automatic] synonym: "embryonic development, gastrointestinal tract morphogenesis" EXACT [OBOL:automatic] synonym: "embryonic digestant tube morphogenesis" EXACT [OBOL:automatic] synonym: "embryonic digestants tube morphogenesis" EXACT [OBOL:automatic] synonym: "embryonic digestive tube morphogenesis" EXACT [OBOL:automatic] synonym: "embryonic gastrointestinal tract morphogenesis" EXACT [OBOL:automatic] synonym: "gastrointestinal tract morphogenesis during embryogenesis" EXACT [OBOL:automatic] synonym: "gastrointestinal tract morphogenesis during embryonal development" EXACT [OBOL:automatic] synonym: "gastrointestinal tract morphogenesis during embryonic development" EXACT [OBOL:automatic] synonym: "gastrointestinal tract morphogenesis involved in embryogenesis" EXACT [OBOL:automatic] synonym: "gastrointestinal tract morphogenesis involved in embryonal development" EXACT [OBOL:automatic] synonym: "gastrointestinal tract morphogenesis involved in embryonic development" EXACT [OBOL:automatic] synonym: "gastrointestinal tract morphogenesis of embryogenesis" EXACT [OBOL:automatic] synonym: "gastrointestinal tract morphogenesis of embryonal development" EXACT [OBOL:automatic] synonym: "gastrointestinal tract morphogenesis of embryonic development" EXACT [OBOL:automatic] synonym: "gastrointestinal tract morphogenesis with embryogenesis" EXACT [OBOL:automatic] synonym: "gastrointestinal tract morphogenesis with embryonal development" EXACT [OBOL:automatic] synonym: "gastrointestinal tract morphogenesis with embryonic development" EXACT [OBOL:automatic] def: "A alimentary canal morphogenesis that is part of a embryogenesis" [OBOL:automatic] ! seconds spent parsing GO:0048557: 9.6 ! parse: GO:0048558 using "embryonic gut morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(embryonic gut, anatomy)]) [-14] ! parse: GO:0048558 using "embryonic gut morphogenesis" => cdef(GO:0048547, [OBO_REL:part_of=GO:0009790]) [-2] ! parse: GO:0048558 using "embryonic gut morphogenesis" => cdef(GO:0048547, [OBO_REL:results_in_developmental_progression_of=anon(embryonic, anatomy)]) [-10] ! parse: GO:0048558 using "embryonic gut morphogenesis" => cdef(cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000917]), [OBO_REL:part_of=GO:0009790]) [-3] ! parse: GO:0048558 using "embryonic gut morphogenesis" => cdef(cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0000112]), [OBO_REL:part_of=GO:0009790]) [-3] ! no existing xp def ! def: "The process by which the anatomical structures of the gut are generated and organized during embryonic development. The gut is the region of the digestive tract extending from the beginning of the intestines to the anus." ! PROPOSED: gut morphogenesis that OBO_REL:part_of embryonic development [cdef(GO:0048547, [OBO_REL:part_of=GO:0009790])] [Term] id: GO:0048558 ! embryonic gut morphogenesis intersection_of: GO:0048547 ! gut morphogenesis intersection_of: OBO_REL:part_of GO:0009790 ! embryonic development synonym: "embryogenesis, gut morphogenesis" EXACT [OBOL:automatic] synonym: "embryogenesis, intestinal morphogenesis" EXACT [OBOL:automatic] synonym: "embryonal development, gut morphogenesis" EXACT [OBOL:automatic] synonym: "embryonal development, intestinal morphogenesis" EXACT [OBOL:automatic] synonym: "embryonic development, gut morphogenesis" EXACT [OBOL:automatic] synonym: "embryonic development, intestinal morphogenesis" EXACT [OBOL:automatic] synonym: "embryonic intestinal morphogenesis" EXACT [OBOL:automatic] def: "A gut morphogenesis that is part of a embryogenesis" [OBOL:automatic] ! seconds spent parsing GO:0048558: 4.83 ! parse: GO:0048562 using "embryonic organ morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(embryonic organ, anatomy)]) [-16] ! parse: GO:0048562 using "embryonic organ morphogenesis" => cdef(GO:0009887, [OBO_REL:part_of=GO:0009790]) [-2] ! parse: GO:0048562 using "embryonic organ morphogenesis" => cdef(GO:0009887, [OBO_REL:results_in_developmental_progression_of=anon(embryonic, anatomy)]) [-10] ! parse: GO:0048562 using "embryonic organ morphogenesis" => cdef(cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=PO:0009008]), [OBO_REL:part_of=GO:0009790]) [-3] ! parse: GO:0048562 using "embryonic organ morphogenesis" => cdef(cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0000496]), [OBO_REL:part_of=GO:0009790]) [-3] ! no existing xp def ! def: "Morphogenesis, during the embryonic phase, of a tissue or tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions." ! PROPOSED: organ morphogenesis that OBO_REL:part_of embryonic development [cdef(GO:0009887, [OBO_REL:part_of=GO:0009790])] [Term] id: GO:0048562 ! embryonic organ morphogenesis intersection_of: GO:0009887 ! organ morphogenesis intersection_of: OBO_REL:part_of GO:0009790 ! embryonic development synonym: "embryogenesis, organ morphogenesis" EXACT [OBOL:automatic] synonym: "embryonal development, organ morphogenesis" EXACT [OBOL:automatic] synonym: "embryonic development, organ morphogenesis" EXACT [OBOL:automatic] def: "A organ morphogenesis that is part of a embryogenesis" [OBOL:automatic] ! seconds spent parsing GO:0048562: 4.84 ! parse: GO:0048564 using "photosystem I assembly" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0009522]) [-2] ! no existing xp def ! def: "The aggregation and bonding together of a set of components to form a photosystem I complex on the thylakoid membrane." ! PROPOSED: cellular component assembly that OBO_REL:results_in_creation_of photosystem I [cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0009522])] [Term] id: GO:0048564 ! photosystem I assembly intersection_of: GO:0022607 ! cellular component assembly intersection_of: OBO_REL:results_in_creation_of GO:0009522 ! photosystem I synonym: "assembly and maintenance of photosystem I" EXACT [OBOL:automatic] synonym: "assembly of photosystem I" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of photosystem I" EXACT [OBOL:automatic] synonym: "biogenesis of photosystem I" EXACT [OBOL:automatic] synonym: "cell structure assembly of photosystem I" EXACT [OBOL:automatic] synonym: "cellular component assembly of photosystem I" EXACT [OBOL:automatic] synonym: "complex assembly of photosystem I" EXACT [OBOL:automatic] synonym: "formation of photosystem I" EXACT [OBOL:automatic] synonym: "photosystem I assembly and maintenance" EXACT [OBOL:automatic] synonym: "photosystem I biogenesis" EXACT [OBOL:automatic] synonym: "photosystem I biogenesis and assembly" EXACT [OBOL:automatic] synonym: "photosystem I cell structure assembly" EXACT [OBOL:automatic] synonym: "photosystem I cellular component assembly" EXACT [OBOL:automatic] synonym: "photosystem I complex assembly" EXACT [OBOL:automatic] synonym: "photosystem I formation" EXACT [OBOL:automatic] def: "The aggregation and bonding together of a set of macromolecules to form a photosystem I" [OBOL:automatic] ! seconds spent parsing GO:0048564: 11.05 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0048565 using "gut development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000917]) [-2] ! parse: GO:0048565 using "gut development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000112]) [-2] ! parse: GO:0048565 using "intestinal development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(intestinal, anatomy)]) [-11] ! parse: GO:0048565 using "intestine development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000328]) [-2] ! parse: GO:0048565 using "intestine development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0001338]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the gut over time, from its formation to the mature structure. The gut is the region of the digestive tract extending from the beginning of the intestines to the anus." ! PROPOSED: developmental process that results_in_complete_developmental_of intestine [cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0001338])] [Term] id: GO:0048565 ! gut development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of ZFA:0001338 ! intestine ! seconds spent parsing GO:0048565: 15.19 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0048566 using "embryonic gut development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(embryonic gut, anatomy)]) [-14] ! parse: GO:0048566 using "embryonic gut development" => cdef(GO:0048565, [OBO_REL:part_of=GO:0009790]) [-2] ! parse: GO:0048566 using "embryonic gut development" => cdef(GO:0048565, [OBO_REL:results_in_developmental_progression_of=anon(embryonic, anatomy)]) [-10] ! parse: GO:0048566 using "embryonic gut development" => cdef(cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000917]), [OBO_REL:part_of=GO:0009790]) [-3] ! parse: GO:0048566 using "embryonic gut development" => cdef(cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000112]), [OBO_REL:part_of=GO:0009790]) [-3] ! no existing xp def ! def: "The process whose specific outcome is the progression of the gut over time, from its formation to the mature structure during embryonic development. The gut is the region of the digestive tract extending from the beginning of the intestines to the anus." ! PROPOSED: gut development that OBO_REL:part_of embryonic development [cdef(GO:0048565, [OBO_REL:part_of=GO:0009790])] [Term] id: GO:0048566 ! embryonic gut development intersection_of: GO:0048565 ! gut development intersection_of: OBO_REL:part_of GO:0009790 ! embryonic development synonym: "embryogenesis, gut development" EXACT [OBOL:automatic] synonym: "embryogenesis, intestinal development" EXACT [OBOL:automatic] synonym: "embryogenesis, intestine development" EXACT [OBOL:automatic] synonym: "embryonal development, gut development" EXACT [OBOL:automatic] synonym: "embryonal development, intestinal development" EXACT [OBOL:automatic] synonym: "embryonal development, intestine development" EXACT [OBOL:automatic] synonym: "embryonic development, gut development" EXACT [OBOL:automatic] synonym: "embryonic development, intestinal development" EXACT [OBOL:automatic] synonym: "embryonic development, intestine development" EXACT [OBOL:automatic] synonym: "embryonic intestinal development" EXACT [OBOL:automatic] synonym: "embryonic intestine development" EXACT [OBOL:automatic] def: "A gut development that is part of a embryogenesis" [OBOL:automatic] ! seconds spent parsing GO:0048566: 4.78 ! parse: GO:0048567 using "ectodermal gut morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(ectodermal gut, anatomy)]) [-15] ! parse: GO:0048567 using "ectodermal gut morphogenesis" => cdef(GO:0048547, [OBO_REL:results_in_developmental_progression_of=anon(ectodermal, anatomy)]) [-11] ! no existing xp def ! def: "The process by which the anatomical structures of the ectodermal gut are generated and organized. Morphogenesis pertains to the creation of form. The ectodermal gut includes those portions of the gut that are derived from ectoderm." ! PROPOSED: gut morphogenesis that OBO_REL:results_in_developmental_progression_of anon(ectodermal, anatomy) [cdef(GO:0048547, [OBO_REL:results_in_developmental_progression_of=anon(ectodermal, anatomy)])] [Term] id: GO:0048567 ! ectodermal gut morphogenesis intersection_of: GO:0048547 ! gut morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of anatomy:ectodermal synonym: "ectodermal intestinal morphogenesis" EXACT [OBOL:automatic] ! seconds spent parsing GO:0048567: 4.64 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0048568 using "embryonic organ development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(embryonic organ, anatomy)]) [-16] ! parse: GO:0048568 using "embryonic organ development" => cdef(GO:0048513, [OBO_REL:part_of=GO:0009790]) [-2] ! parse: GO:0048568 using "embryonic organ development" => cdef(GO:0048513, [OBO_REL:results_in_developmental_progression_of=anon(embryonic, anatomy)]) [-10] ! parse: GO:0048568 using "embryonic organ development" => cdef(cdef(GO:0032502, [results_in_complete_developmental_of=PO:0009008]), [OBO_REL:part_of=GO:0009790]) [-3] ! parse: GO:0048568 using "embryonic organ development" => cdef(cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000496]), [OBO_REL:part_of=GO:0009790]) [-3] ! parse: GO:0048568 using "embryonic organogenesis" => cdef(GO:0048513, [OBO_REL:part_of=GO:0009790]) [-2] ! parse: GO:0048568 using "embryonic organogenesis" => cdef(GO:0048513, [OBO_REL:results_in_developmental_progression_of=anon(embryonic, anatomy)]) [-10] ! no existing xp def ! def: "Development, taking place during the embryonic phase, of a tissue or tissues that work together to perform a specific function or functions. Development pertains to the process whose specific outcome is the progression of a structure over time, from its formation to the mature structure. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions." ! PROPOSED: organ development that OBO_REL:part_of embryonic development [cdef(GO:0048513, [OBO_REL:part_of=GO:0009790])] [Term] id: GO:0048568 ! embryonic organ development intersection_of: GO:0048513 ! organ development intersection_of: OBO_REL:part_of GO:0009790 ! embryonic development synonym: "embryogenesis, development of an organ" EXACT [OBOL:automatic] synonym: "embryogenesis, organ development" EXACT [OBOL:automatic] synonym: "embryogenesis, organogenesis" EXACT [OBOL:automatic] synonym: "embryonal development, development of an organ" EXACT [OBOL:automatic] synonym: "embryonal development, organ development" EXACT [OBOL:automatic] synonym: "embryonal development, organogenesis" EXACT [OBOL:automatic] synonym: "embryonic development of an organ" EXACT [OBOL:automatic] synonym: "embryonic development, development of an organ" EXACT [OBOL:automatic] synonym: "embryonic development, organ development" EXACT [OBOL:automatic] synonym: "embryonic development, organogenesis" EXACT [OBOL:automatic] def: "A development of an organ that is part of a embryogenesis" [OBOL:automatic] ! seconds spent parsing GO:0048568: 9.21 ! parse: GO:0048570 using "notochord morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0000135]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of the notochord are generated and organized. Morphogenesis pertains to the creation of form. The notochord is a mesoderm-derived structure located ventral of the developing nerve cord. In vertebrates, the notochord serves as a core around which other mesodermal cells form the vertebrae. In the most primitive chordates, which lack vertebrae, the notochord persists as a substitute for a vertebral column." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of notochord [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0000135])] [Term] id: GO:0048570 ! notochord morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0000135 ! notochord ! seconds spent parsing GO:0048570: 5.26 ! parse: GO:0048592 using "eye morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00004508]) [-2] ! parse: GO:0048592 using "eye morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000261]) [-2] ! parse: GO:0048592 using "eye morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0000107]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of the eye are generated and organized. Morphogenesis pertains to the creation of form." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of eye [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0000107])] [Term] id: GO:0048592 ! eye morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0000107 ! eye ! seconds spent parsing GO:0048592: 0.04 ! parse: GO:0048593 using "camera-style eye morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(camera-style eye, anatomy)]) [-17] ! parse: GO:0048593 using "camera-style eye morphogenesis" => cdef(GO:0048592, [OBO_REL:results_in_developmental_progression_of=anon(camera-style, anatomy)]) [-13] ! parse: GO:0048593 using "camera-type eye morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(camera-type eye, anatomy)]) [-16] ! parse: GO:0048593 using "camera-type eye morphogenesis" => cdef(GO:0048592, [OBO_REL:results_in_developmental_progression_of=anon(camera-type, anatomy)]) [-12] ! no existing xp def ! def: "The process by which the anatomical structures of the eye are generated and organized. Morphogenesis pertains to the creation of form. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field." ! PROPOSED: eye morphogenesis that OBO_REL:results_in_developmental_progression_of anon(camera-type, anatomy) [cdef(GO:0048592, [OBO_REL:results_in_developmental_progression_of=anon(camera-type, anatomy)])] [Term] id: GO:0048593 ! camera-type eye morphogenesis intersection_of: GO:0048592 ! eye morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of anatomy:camera_-_type synonym: "camera-type eye morphogenesis (sensu Endopterygota)" EXACT [OBOL:automatic] ! seconds spent parsing GO:0048593: 41.46 ! parse: GO:0048596 using "embryonic camera-type eye morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(embryonic camera-type eye, anatomy)]) [-26] ! parse: GO:0048596 using "embryonic camera-type eye morphogenesis" => cdef(GO:0048592, [OBO_REL:results_in_developmental_progression_of=anon(embryonic camera-type, anatomy)]) [-22] ! parse: GO:0048596 using "embryonic camera-type eye morphogenesis" => cdef(GO:0048593, [OBO_REL:part_of=GO:0009790]) [-2] ! parse: GO:0048596 using "embryonic camera-type eye morphogenesis" => cdef(GO:0048593, [OBO_REL:results_in_developmental_progression_of=anon(embryonic, anatomy)]) [-10] ! parse: GO:0048596 using "embryonic camera-type eye morphogenesis" => cdef(cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(camera-type eye, anatomy)]), [OBO_REL:part_of=GO:0009790]) [-17] ! parse: GO:0048596 using "embryonic camera-type eye morphogenesis" => cdef(cdef(GO:0048592, [OBO_REL:results_in_developmental_progression_of=anon(camera-type, anatomy)]), [OBO_REL:part_of=GO:0009790]) [-13] ! parse: GO:0048596 using "embryonic eye morphogenesis (sensu Actinopterygii)" => cdef(GO:0048593, [OBO_REL:part_of=GO:0009790]) [-2] ! parse: GO:0048596 using "embryonic eye morphogenesis (sensu Actinopterygii)" => cdef(GO:0048593, [OBO_REL:results_in_developmental_progression_of=anon(embryonic, anatomy)]) [-10] ! no existing xp def ! def: "The process by which the anatomical structures of the eye are generated and organized during embryonic development. Morphogenesis pertains to the creation of form." ! PROPOSED: camera-type eye morphogenesis that OBO_REL:part_of embryonic development [cdef(GO:0048593, [OBO_REL:part_of=GO:0009790])] [Term] id: GO:0048596 ! embryonic camera-type eye morphogenesis intersection_of: GO:0048593 ! camera-type eye morphogenesis intersection_of: OBO_REL:part_of GO:0009790 ! embryonic development synonym: "embryogenesis, camera-style eye morphogenesis" EXACT [OBOL:automatic] synonym: "embryogenesis, camera-type eye morphogenesis" EXACT [OBOL:automatic] synonym: "embryogenesis, eye morphogenesis (sensu Actinopterygii)" EXACT [OBOL:automatic] synonym: "embryogenesis, eye morphogenesis (sensu Mammalia)" EXACT [OBOL:automatic] synonym: "embryogenesis, eye morphogenesis (sensu Vertebrata)" EXACT [OBOL:automatic] synonym: "embryonal development, camera-style eye morphogenesis" EXACT [OBOL:automatic] synonym: "embryonal development, camera-type eye morphogenesis" EXACT [OBOL:automatic] synonym: "embryonal development, eye morphogenesis (sensu Actinopterygii)" EXACT [OBOL:automatic] synonym: "embryonal development, eye morphogenesis (sensu Mammalia)" EXACT [OBOL:automatic] synonym: "embryonal development, eye morphogenesis (sensu Vertebrata)" EXACT [OBOL:automatic] synonym: "embryonic camera-style eye morphogenesis" EXACT [OBOL:automatic] synonym: "embryonic development, camera-style eye morphogenesis" EXACT [OBOL:automatic] synonym: "embryonic development, camera-type eye morphogenesis" EXACT [OBOL:automatic] synonym: "embryonic development, eye morphogenesis (sensu Actinopterygii)" EXACT [OBOL:automatic] synonym: "embryonic development, eye morphogenesis (sensu Mammalia)" EXACT [OBOL:automatic] synonym: "embryonic development, eye morphogenesis (sensu Vertebrata)" EXACT [OBOL:automatic] synonym: "embryonic eye morphogenesis (sensu Mammalia)" EXACT [OBOL:automatic] synonym: "embryonic eye morphogenesis (sensu Vertebrata)" EXACT [OBOL:automatic] def: "A camera-style eye morphogenesis that is part of a embryogenesis" [OBOL:automatic] ! seconds spent parsing GO:0048596: 10.59 ! parse: GO:0048598 using "embryonic morphogenesis" => cdef(GO:0009653, [OBO_REL:part_of=GO:0009790]) [-2] ! parse: GO:0048598 using "embryonic morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(embryonic, anatomy)]) [-10] ! no existing xp def ! def: "The process by which anatomical structures are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form. The embryonic phase begins with zygote formation. The end of the embryonic phase is organism-specific. For example, it would be at birth for mammals, larval hatching for insects and seed dormancy in plants." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:part_of embryonic development [cdef(GO:0009653, [OBO_REL:part_of=GO:0009790])] [Term] id: GO:0048598 ! embryonic morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:part_of GO:0009790 ! embryonic development synonym: "embryogenesis, anatomical structure morphogenesis" EXACT [OBOL:automatic] synonym: "embryogenesis, morphogenesis" EXACT [OBOL:automatic] synonym: "embryonal development, anatomical structure morphogenesis" EXACT [OBOL:automatic] synonym: "embryonal development, morphogenesis" EXACT [OBOL:automatic] synonym: "embryonic anatomical structure morphogenesis" EXACT [OBOL:automatic] synonym: "embryonic development, anatomical structure morphogenesis" EXACT [OBOL:automatic] synonym: "embryonic development, morphogenesis" EXACT [OBOL:automatic] def: "A anatomical structure morphogenesis that is part of a embryogenesis" [OBOL:automatic] ! seconds spent parsing GO:0048598: 4.37 ! Already have xp for: GO:0048599 oocyte development ! CURRENT : developmental process that OBO_REL:results_in_developmental_progression_of oocyte [cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=CL:0000023])] ! Already have xp for: GO:0048600 oocyte fate commitment ! CURRENT : cell fate commitment that OBO_REL:results_in_commitment_to oocyte [cdef(GO:0045165, [OBO_REL:results_in_commitment_to=CL:0000023])] ! Already have xp for: GO:0048601 oocyte morphogenesis ! CURRENT : anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of oocyte [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=CL:0000023])] ! No parse for: GO:0048609 reproductive process in a multicellular organism ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0048611 using "embryonic ectodermal gut development" => cdef(GO:0007439, [OBO_REL:part_of=GO:0009790]) [-2] ! parse: GO:0048611 using "embryonic ectodermal gut development" => cdef(GO:0007439, [OBO_REL:results_in_developmental_progression_of=anon(embryonic, anatomy)]) [-10] ! parse: GO:0048611 using "embryonic ectodermal gut development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(embryonic ectodermal gut, anatomy)]) [-25] ! parse: GO:0048611 using "embryonic ectodermal gut development" => cdef(GO:0048565, [OBO_REL:results_in_developmental_progression_of=anon(embryonic ectodermal, anatomy)]) [-21] ! parse: GO:0048611 using "embryonic ectodermal gut development" => cdef(cdef(GO:0032502, [results_in_complete_developmental_of=anon(ectodermal gut, anatomy)]), [OBO_REL:part_of=GO:0009790]) [-16] ! parse: GO:0048611 using "embryonic ectodermal gut development" => cdef(cdef(GO:0048565, [OBO_REL:results_in_developmental_progression_of=anon(ectodermal, anatomy)]), [OBO_REL:part_of=GO:0009790]) [-12] ! no existing xp def ! def: "The process, occurring during the embryonic phase, whose specific outcome is the progression of the ectodermal gut over time, from its formation to the mature structure." ! PROPOSED: ectodermal gut development that OBO_REL:part_of embryonic development [cdef(GO:0007439, [OBO_REL:part_of=GO:0009790])] [Term] id: GO:0048611 ! embryonic ectodermal gut development intersection_of: GO:0007439 ! ectodermal gut development intersection_of: OBO_REL:part_of GO:0009790 ! embryonic development synonym: "embryogenesis, ectodermal gut development" EXACT [OBOL:automatic] synonym: "embryonal development, ectodermal gut development" EXACT [OBOL:automatic] synonym: "embryonic development, ectodermal gut development" EXACT [OBOL:automatic] def: "A ectodermal gut development that is part of a embryogenesis" [OBOL:automatic] ! seconds spent parsing GO:0048611: 4.87 ! parse: GO:0048613 using "embryonic ectodermal gut morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(embryonic ectodermal gut, anatomy)]) [-25] ! parse: GO:0048613 using "embryonic ectodermal gut morphogenesis" => cdef(GO:0048547, [OBO_REL:results_in_developmental_progression_of=anon(embryonic ectodermal, anatomy)]) [-21] ! parse: GO:0048613 using "embryonic ectodermal gut morphogenesis" => cdef(GO:0048567, [OBO_REL:part_of=GO:0009790]) [-2] ! parse: GO:0048613 using "embryonic ectodermal gut morphogenesis" => cdef(GO:0048567, [OBO_REL:results_in_developmental_progression_of=anon(embryonic, anatomy)]) [-10] ! parse: GO:0048613 using "embryonic ectodermal gut morphogenesis" => cdef(cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(ectodermal gut, anatomy)]), [OBO_REL:part_of=GO:0009790]) [-16] ! parse: GO:0048613 using "embryonic ectodermal gut morphogenesis" => cdef(cdef(GO:0048547, [OBO_REL:results_in_developmental_progression_of=anon(ectodermal, anatomy)]), [OBO_REL:part_of=GO:0009790]) [-12] ! no existing xp def ! def: "The process, occurring during the embryonic phase, by which the anatomical structures of the ectodermal gut are generated and organized. Morphogenesis pertains to the creation of form." ! PROPOSED: ectodermal gut morphogenesis that OBO_REL:part_of embryonic development [cdef(GO:0048567, [OBO_REL:part_of=GO:0009790])] [Term] id: GO:0048613 ! embryonic ectodermal gut morphogenesis intersection_of: GO:0048567 ! ectodermal gut morphogenesis intersection_of: OBO_REL:part_of GO:0009790 ! embryonic development synonym: "embryogenesis, ectodermal gut morphogenesis" EXACT [OBOL:automatic] synonym: "embryonal development, ectodermal gut morphogenesis" EXACT [OBOL:automatic] synonym: "embryonic development, ectodermal gut morphogenesis" EXACT [OBOL:automatic] def: "A ectodermal gut morphogenesis that is part of a embryogenesis" [OBOL:automatic] ! seconds spent parsing GO:0048613: 5.04 ! parse: GO:0048615 using "embryonic anterior midgut (ectodermal) morphogenesis" => cdef(GO:0007441, [OBO_REL:part_of=GO:0009790]) [-2] ! parse: GO:0048615 using "embryonic anterior midgut (ectodermal) morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(( ectodermal), anatomy), OBO_REL:unfolds_in=FBbt:00005245]) [-15] ! parse: GO:0048615 using "embryonic anterior midgut (ectodermal) morphogenesis" => cdef(cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(anterior midgut (ectodermal), anatomy)]), [OBO_REL:part_of=GO:0009790]) [-30] ! no existing xp def ! def: "The process by which the anatomical structures of the anterior midgut (ectodermal) are generated and organized, during the embryonic phase. Morphogenesis pertains to the creation of form." ! PROPOSED: anterior midgut (ectodermal) morphogenesis that OBO_REL:part_of embryonic development [cdef(GO:0007441, [OBO_REL:part_of=GO:0009790])] [Term] id: GO:0048615 ! embryonic anterior midgut (ectodermal) morphogenesis intersection_of: GO:0007441 ! anterior midgut (ectodermal) morphogenesis intersection_of: OBO_REL:part_of GO:0009790 ! embryonic development synonym: "embryogenesis, anterior midgut (ectodermal) morphogenesis" EXACT [OBOL:automatic] synonym: "embryonal development, anterior midgut (ectodermal) morphogenesis" EXACT [OBOL:automatic] synonym: "embryonic anterior midgut (ectodermal) morphogenesis" EXACT [OBOL:automatic] synonym: "embryonic development, anterior midgut (ectodermal) morphogenesis" EXACT [OBOL:automatic] def: "A anterior midgut (ectodermal) morphogenesis that is part of a embryogenesis" [OBOL:automatic] ! seconds spent parsing GO:0048615: 14.03 ! parse: GO:0048617 using "embryonic foregut morphogenesis" => cdef(GO:0007440, [OBO_REL:part_of=GO:0009790]) [-2] ! parse: GO:0048617 using "embryonic foregut morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00005606]) [-2] ! parse: GO:0048617 using "embryonic foregut morphogenesis" => cdef(cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00005379]), [OBO_REL:part_of=GO:0009790]) [-3] ! parse: GO:0048617 using "embryonic foregut morphogenesis" => cdef(cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0001526]), [OBO_REL:part_of=GO:0009790]) [-3] ! no existing xp def ! def: "The process by which the anatomical structures of the foregut are generated and organized, during the embryonic phase. Morphogenesis pertains to the creation of form." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of embryonic foregut [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00005606])] [Term] id: GO:0048617 ! embryonic foregut morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of FBbt:00005606 ! embryonic foregut ! seconds spent parsing GO:0048617: 5.51 ! parse: GO:0048619 using "embryonic hindgut morphogenesis" => cdef(GO:0007442, [OBO_REL:part_of=GO:0009790]) [-2] ! parse: GO:0048619 using "embryonic hindgut morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00005630]) [-2] ! parse: GO:0048619 using "embryonic hindgut morphogenesis" => cdef(cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00005384]), [OBO_REL:part_of=GO:0009790]) [-3] ! parse: GO:0048619 using "embryonic hindgut morphogenesis" => cdef(cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0001527]), [OBO_REL:part_of=GO:0009790]) [-3] ! no existing xp def ! def: "The process by which the anatomical structures of the hindgut are generated and organized, during the embryonic phase. Morphogenesis pertains to the creation of form." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of embryonic hindgut [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00005630])] [Term] id: GO:0048619 ! embryonic hindgut morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of FBbt:00005630 ! embryonic hindgut ! seconds spent parsing GO:0048619: 5.51 ! parse: GO:0048623 using "non-vegetative vivipary (sensu Magnoliophyta)" => cdef(GO:0048624, [OBO_REL:results_in_developmental_progression_of=anon(non-, anatomy)]) [-5] ! no existing xp def ! def: "The process by which a seed germinates before being shed from the parent plant." ! PROPOSED: plantlet formation on parent plant that OBO_REL:results_in_developmental_progression_of anon(non-, anatomy) [cdef(GO:0048624, [OBO_REL:results_in_developmental_progression_of=anon(non-, anatomy)])] [Term] id: GO:0048623 ! seed germination on parent plant intersection_of: GO:0048624 ! plantlet formation on parent plant intersection_of: OBO_REL:results_in_developmental_progression_of anatomy:non_- synonym: "non-plantlet formation on parent plant" EXACT [OBOL:automatic] ! seconds spent parsing GO:0048623: 17.67 ! Already have xp for: GO:0048625 myoblast cell fate commitment ! CURRENT : cell fate commitment that OBO_REL:results_in_commitment_to myoblast [cdef(GO:0045165, [OBO_REL:results_in_commitment_to=CL:0000056])] ! Already have xp for: GO:0048626 myoblast cell fate specification ! CURRENT : cell fate specification that OBO_REL:results_in_specification_of myoblast [cdef(GO:0001708, [OBO_REL:results_in_specification_of=CL:0000056])] ! Already have xp for: GO:0048627 myoblast development ! CURRENT : developmental process that OBO_REL:results_in_developmental_progression_of myoblast [cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=CL:0000056])] ! Already have xp for: GO:0048628 myoblast maturation ! CURRENT : developmental maturation that OBO_REL:results_in_developmental_progression_of myoblast [cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=CL:0000056])] ! Already have xp for: GO:0048629 trichome patterning ! CURRENT : pattern specification process that OBO_REL:results_in_patterning_for trichome [cdef(GO:0007389, [OBO_REL:results_in_patterning_for=CL:0000282])] ! parse: GO:0048630 using "skeletal muscle growth" => cdef(GO:0040007, [OBO_REL:results_in_increase_in_mass_of=MA:0000165]) [-2] ! no existing xp def ! def: "The increase in size or mass of a skeletal muscle. This may be due to a change in the fiber number or size." ! PROPOSED: growth that OBO_REL:results_in_increase_in_mass_of skeletal muscle [cdef(GO:0040007, [OBO_REL:results_in_increase_in_mass_of=MA:0000165])] [Term] id: GO:0048630 ! skeletal muscle growth intersection_of: GO:0040007 ! growth intersection_of: OBO_REL:results_in_increase_in_mass_of MA:0000165 ! skeletal muscle ! seconds spent parsing GO:0048630: 5.32 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0048637 using "skeletal muscle development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000165]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the skeletal muscle over time, from its formation to the mature structure." ! PROPOSED: developmental process that results_in_complete_developmental_of skeletal muscle [cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000165])] [Term] id: GO:0048637 ! skeletal muscle development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of MA:0000165 ! skeletal muscle ! seconds spent parsing GO:0048637: 4.88 ! parse: GO:0048644 using "muscle morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000015]) [-2] ! parse: GO:0048644 using "muscle morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0000548]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of muscle are generated and organized. Morphogenesis pertains to the creation of form." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of musculature system [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0000548])] [Term] id: GO:0048644 ! muscle morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0000548 ! musculature system synonym: "muscles anatomical structure morphogenesis" EXACT [OBOL:automatic] synonym: "muscles morphogenesis" EXACT [OBOL:automatic] synonym: "musculature system anatomical structure morphogenesis" EXACT [OBOL:automatic] synonym: "musculature system morphogenesis" EXACT [OBOL:automatic] ! seconds spent parsing GO:0048644: 6.25 ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0048645 using "organ formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=PO:0009008]) [-2] ! parse: GO:0048645 using "organ formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=ZFA:0000496]) [-2] ! parse: GO:0048645 using "organ formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=PO:0009008]) [-2] ! parse: GO:0048645 using "organ formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0000496]) [-2] ! no existing xp def ! def: "The process pertaining to the initial formation of an organ from unspecified parts. The process begins with the specific processes that contribute to the appearance of the discrete structure, such as inductive events, and ends when the structural rudiment of the organ is recognizable, such as a condensation of mesenchymal cells into the organ rudiment. Organs are a natural part or structure in an animal or a plant, capable of performing some special action (termed its function), which is essential to the life or well-being of the whole. The heart and lungs are organs of animals, and the petal and leaf are organs of plants. In animals the organs are generally made up of several tissues, one of which usually predominates, and determines the principal function of the organ." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of compound organ [cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0000496])] [Term] id: GO:0048645 ! organ formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of ZFA:0000496 ! compound organ synonym: "compound organ anatomical structure formation" EXACT [OBOL:automatic] synonym: "compound organ formation" EXACT [OBOL:automatic] synonym: "compound organ formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0048645: 6.35 ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0048646 using "anatomical structure formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=ZFA:0000037]) [-2] ! no existing xp def ! def: "The process pertaining to the initial formation of an anatomical structure from unspecified parts. This process begins with the specific processes that contribute to the appearance of the discrete structure and ends when the structural rudiment is recognizable. An anatomical structure is any biological entity that occupies space and is distinguished from its surroundings. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome." ! PROPOSED: biosynthetic process that OBO_REL:results_in_creation_of anatomical structure [cdef(GO:0009058, [OBO_REL:results_in_creation_of=ZFA:0000037])] [Term] id: GO:0048646 ! anatomical structure formation intersection_of: GO:0009058 ! biosynthetic process intersection_of: OBO_REL:results_in_creation_of ZFA:0000037 ! anatomical structure ! seconds spent parsing GO:0048646: 14.41 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0048653 using "anther development" => cdef(GO:0032502, [results_in_complete_developmental_of=PO:0009066]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the anther over time, from its formation to the mature structure." ! PROPOSED: developmental process that results_in_complete_developmental_of anther [cdef(GO:0032502, [results_in_complete_developmental_of=PO:0009066])] [Term] id: GO:0048653 ! anther development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of PO:0009066 ! anther ! seconds spent parsing GO:0048653: 4.78 ! parse: GO:0048654 using "anther morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=PO:0009066]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of the anther are generated and organized. Morphogenesis pertains to the creation of form." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of anther [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=PO:0009066])] [Term] id: GO:0048654 ! anther morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of PO:0009066 ! anther ! seconds spent parsing GO:0048654: 5.24 ! Already have xp for: GO:0048659 smooth muscle cell proliferation ! CURRENT : cell proliferation that OBO_REL:increases_population_size_of smooth muscle cell [cdef(GO:0008283, [OBO_REL:increases_population_size_of=CL:0000192])] ! Already have xp for: GO:0048663 neuron fate commitment ! CURRENT : cell fate commitment that OBO_REL:results_in_commitment_to neuron [cdef(GO:0045165, [OBO_REL:results_in_commitment_to=CL:0000540])] ! Already have xp for: GO:0048664 neuron fate determination ! CURRENT : cell fate determination that OBO_REL:results_in_determination_to neuron [cdef(GO:0001709, [OBO_REL:results_in_determination_to=CL:0000540])] ! Already have xp for: GO:0048665 neuron fate specification ! CURRENT : cell fate specification that OBO_REL:results_in_specification_of neuron [cdef(GO:0001708, [OBO_REL:results_in_specification_of=CL:0000540])] ! Already have xp for: GO:0048666 neuron development ! CURRENT : developmental process that OBO_REL:results_in_developmental_progression_of neuron [cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=CL:0000540])] ! parse: GO:0048667 using "neuron morphogenesis during differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(morphogenesis during, cell), OBO_REL:unfolds_in=CL:0000540]) [-22] ! parse: GO:0048667 using "neuron morphogenesis during differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(morphogenesis during, cell), OBO_REL:unfolds_in=FBbt:00005106]) [-22] ! parse: GO:0048667 using "neuron morphogenesis during differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(morphogenesis during, cell), OBO_REL:unfolds_in=ZFA:0009248]) [-22] ! no existing xp def ! def: "The process by which the structures of a neuron are generated and organized. This process occurs while the initially relatively unspecialized cell is acquiring the specialized features of a neuron." ! PROPOSED: cell differentiation that OBO_REL:results_in_acquisition_of_features_of anon(morphogenesis during, cell) and OBO_REL:unfolds_in neuron [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(morphogenesis during, cell), OBO_REL:unfolds_in=ZFA:0009248])] [Term] id: GO:0048667 ! neuron morphogenesis during differentiation intersection_of: GO:0030154 ! cell differentiation intersection_of: OBO_REL:results_in_acquisition_of_features_of cell:morphogenesis_during intersection_of: OBO_REL:unfolds_in ZFA:0009248 ! neuron ! seconds spent parsing GO:0048667: 8.17 ! No parse for: GO:0048675 axon extension ! parse: GO:0048676 using "axon extension involved in development" => cdef(GO:0032502, [and=results_in_complete_developmental_of(anon(involved in, anatomy))/unfolds_in(ZFA:0000106), OBO_REL:unfolds_in=GO:0030424]) [-3] ! no existing xp def ! def: "Long distance growth of a single axon process involved in cellular development." ! PROPOSED: developmental process that and results_in_complete_developmental_of(anon(involved in, anatomy))/unfolds_in(ZFA:0000106) and OBO_REL:unfolds_in axon [cdef(GO:0032502, [and=results_in_complete_developmental_of(anon(involved in, anatomy))/unfolds_in(ZFA:0000106), OBO_REL:unfolds_in=GO:0030424])] [Term] id: GO:0048676 ! axon extension involved in development intersection_of: GO:0032502 ! developmental process intersection_of: and results_in_complete_developmental_of(anon(involved in, anatomy))/unfolds_in(ZFA:0000106) intersection_of: OBO_REL:unfolds_in GO:0030424 ! axon ! seconds spent parsing GO:0048676: 14.96 ! Already have xp for: GO:0048677 axon extension involved in regeneration ! CURRENT : axon extension that OBO_REL:part_of regeneration [cdef(GO:0048675, [OBO_REL:part_of=GO:0031099])] ! parse: GO:0048701 using "embryonic cranial skeleton morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(embryonic cranial skeleton, anatomy)]) [-27] ! parse: GO:0048701 using "embryonic cranial skeleton morphogenesis" => cdef(cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0000737]), [OBO_REL:part_of=GO:0009790]) [-3] ! parse: GO:0048701 using "embryonic cranium morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(embryonic cranium, anatomy)]) [-18] ! parse: GO:0048701 using "embryonic cranium morphogenesis" => cdef(cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000316]), [OBO_REL:part_of=GO:0009790]) [-3] ! no existing xp def ! def: "The process by which the anatomical structures of cranial skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form." ! PROPOSED: cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0000737]) that OBO_REL:part_of embryonic development [cdef(cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0000737]), [OBO_REL:part_of=GO:0009790])] [Term] id: GO:0048701 ! embryonic cranial skeleton morphogenesis intersection_of: cranial_skeleton_morphogenesis intersection_of: OBO_REL:part_of GO:0009790 ! embryonic development synonym: "embryogenesis, cranial skeleton morphogenesis" EXACT [OBOL:automatic] synonym: "embryonal development, cranial skeleton morphogenesis" EXACT [OBOL:automatic] synonym: "embryonic development, cranial skeleton morphogenesis" EXACT [OBOL:automatic] ! seconds spent parsing GO:0048701: 19.03 ! parse: GO:0048702 using "embryonic braincase morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(embryonic braincase, anatomy)]) [-20] ! parse: GO:0048702 using "embryonic braincase morphogenesis" => cdef(cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(braincase, anatomy)]), [OBO_REL:part_of=GO:0009790]) [-11] ! parse: GO:0048702 using "embryonic neurocranium morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(embryonic neurocranium, anatomy)]) [-23] ! parse: GO:0048702 using "embryonic neurocranium morphogenesis" => cdef(cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000317]), [OBO_REL:part_of=GO:0009790]) [-3] ! parse: GO:0048702 using "embryonic neurocranium morphogenesis" => cdef(cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0000377]), [OBO_REL:part_of=GO:0009790]) [-3] ! no existing xp def ! def: "The process by which the anatomical structures of neurocranium are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form. The neurocranium is the portion of the vertebrate skull surrounding the brain." ! PROPOSED: cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0000377]) that OBO_REL:part_of embryonic development [cdef(cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0000377]), [OBO_REL:part_of=GO:0009790])] [Term] id: GO:0048702 ! embryonic neurocranium morphogenesis intersection_of: neurocranium_morphogenesis intersection_of: OBO_REL:part_of GO:0009790 ! embryonic development synonym: "embryogenesis, neurocranium morphogenesis" EXACT [OBOL:automatic] synonym: "embryonal development, neurocranium morphogenesis" EXACT [OBOL:automatic] synonym: "embryonic development, neurocranium morphogenesis" EXACT [OBOL:automatic] ! seconds spent parsing GO:0048702: 18.93 ! parse: GO:0048703 using "embryonic pharyngeal skeleton morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(embryonic pharyngeal skeleton, anatomy)]) [-30] ! parse: GO:0048703 using "embryonic pharyngeal skeleton morphogenesis" => cdef(cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0001216]), [OBO_REL:part_of=GO:0009790]) [-3] ! parse: GO:0048703 using "embryonic viscerocranium morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(embryonic viscerocranium, anatomy)]) [-25] ! parse: GO:0048703 using "embryonic viscerocranium morphogenesis" => cdef(cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000318]), [OBO_REL:part_of=GO:0009790]) [-3] ! no existing xp def ! def: "The process by which the anatomical structures of viscerocranium are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form. The viscerocranium is the part of the skull comprising the facial bones." ! PROPOSED: cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0001216]) that OBO_REL:part_of embryonic development [cdef(cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0001216]), [OBO_REL:part_of=GO:0009790])] [Term] id: GO:0048703 ! embryonic viscerocranium morphogenesis intersection_of: pharyngeal_arch_skeleton_anatomical_structure_morphogenesis intersection_of: OBO_REL:part_of GO:0009790 ! embryonic development synonym: "embryogenesis, pharyngeal arch skeleton anatomical structure morphogenesis" EXACT [OBOL:automatic] synonym: "embryogenesis, pharyngeal arch skeleton morphogenesis" EXACT [OBOL:automatic] synonym: "embryogenesis, pharyngeal skeleton morphogenesis" EXACT [OBOL:automatic] synonym: "embryogenesis, splanchnocranium anatomical structure morphogenesis" EXACT [OBOL:automatic] synonym: "embryogenesis, splanchnocranium morphogenesis" EXACT [OBOL:automatic] synonym: "embryonal development, pharyngeal arch skeleton anatomical structure morphogenesis" EXACT [OBOL:automatic] synonym: "embryonal development, pharyngeal arch skeleton morphogenesis" EXACT [OBOL:automatic] synonym: "embryonal development, pharyngeal skeleton morphogenesis" EXACT [OBOL:automatic] synonym: "embryonal development, splanchnocranium anatomical structure morphogenesis" EXACT [OBOL:automatic] synonym: "embryonal development, splanchnocranium morphogenesis" EXACT [OBOL:automatic] synonym: "embryonic development, pharyngeal arch skeleton anatomical structure morphogenesis" EXACT [OBOL:automatic] synonym: "embryonic development, pharyngeal arch skeleton morphogenesis" EXACT [OBOL:automatic] synonym: "embryonic development, pharyngeal skeleton morphogenesis" EXACT [OBOL:automatic] synonym: "embryonic development, splanchnocranium anatomical structure morphogenesis" EXACT [OBOL:automatic] synonym: "embryonic development, splanchnocranium morphogenesis" EXACT [OBOL:automatic] synonym: "embryonic pharyngeal arch skeleton anatomical structure morphogenesis" EXACT [OBOL:automatic] synonym: "embryonic pharyngeal arch skeleton morphogenesis" EXACT [OBOL:automatic] synonym: "embryonic splanchnocranium anatomical structure morphogenesis" EXACT [OBOL:automatic] synonym: "embryonic splanchnocranium morphogenesis" EXACT [OBOL:automatic] ! seconds spent parsing GO:0048703: 18.92 ! parse: GO:0048704 using "embryonic skeletal morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(embryonic skeletal, anatomy)]) [-19] ! parse: GO:0048704 using "embryonic skeletal morphogenesis" => cdef(GO:0048705, [OBO_REL:part_of=GO:0009790]) [-2] ! parse: GO:0048704 using "embryonic skeletal morphogenesis" => cdef(GO:0048705, [OBO_REL:results_in_developmental_progression_of=anon(embryonic, anatomy)]) [-10] ! parse: GO:0048704 using "embryonic skeletal morphogenesis" => cdef(cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(skeletal, anatomy)]), [OBO_REL:part_of=GO:0009790]) [-10] ! no existing xp def ! def: "The process by which the anatomical structures of skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form." ! PROPOSED: skeletal morphogenesis that OBO_REL:part_of embryonic development [cdef(GO:0048705, [OBO_REL:part_of=GO:0009790])] [Term] id: GO:0048704 ! embryonic skeletal morphogenesis intersection_of: GO:0048705 ! skeletal morphogenesis intersection_of: OBO_REL:part_of GO:0009790 ! embryonic development synonym: "embryogenesis, skeletal morphogenesis" EXACT [OBOL:automatic] synonym: "embryonal development, skeletal morphogenesis" EXACT [OBOL:automatic] synonym: "embryonic development, skeletal morphogenesis" EXACT [OBOL:automatic] def: "A skeletal morphogenesis that is part of a embryogenesis" [OBOL:automatic] ! seconds spent parsing GO:0048704: 8.75 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0048706 using "embryonic skeletal development" => cdef(GO:0001501, [OBO_REL:part_of=GO:0009790]) [-2] ! parse: GO:0048706 using "embryonic skeletal development" => cdef(GO:0001501, [OBO_REL:results_in_developmental_progression_of=anon(embryonic, anatomy)]) [-10] ! parse: GO:0048706 using "embryonic skeletal development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(embryonic skeletal, anatomy)]) [-19] ! parse: GO:0048706 using "embryonic skeletal development" => cdef(cdef(GO:0032502, [results_in_complete_developmental_of=anon(skeletal, anatomy)]), [OBO_REL:part_of=GO:0009790]) [-10] ! no existing xp def ! def: "The process, occurring during the embryonic phase, whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure." ! PROPOSED: skeletal development that OBO_REL:part_of embryonic development [cdef(GO:0001501, [OBO_REL:part_of=GO:0009790])] [Term] id: GO:0048706 ! embryonic skeletal development intersection_of: GO:0001501 ! skeletal development intersection_of: OBO_REL:part_of GO:0009790 ! embryonic development synonym: "embryogenesis, skeletal development" EXACT [OBOL:automatic] synonym: "embryonal development, skeletal development" EXACT [OBOL:automatic] synonym: "embryonic development, skeletal development" EXACT [OBOL:automatic] def: "A skeletal development that is part of a embryogenesis" [OBOL:automatic] ! seconds spent parsing GO:0048706: 8.62 ! parse: GO:0048707 using "instar larval or pupal morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(instar larval or pupal, anatomy)]) [-23] ! no existing xp def ! def: "The process, occurring during instar larval or pupal development, by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of anon(instar larval or pupal, anatomy) [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(instar larval or pupal, anatomy)])] [Term] id: GO:0048707 ! instar larval or pupal morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of anatomy:instar_larval_or_pupal synonym: "instar larval or pupal anatomical structure morphogenesis" EXACT [OBOL:automatic] ! seconds spent parsing GO:0048707: 8.83 ! Already have xp for: GO:0048708 astrocyte differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of astrocyte [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000127])] ! Already have xp for: GO:0048709 oligodendrocyte differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of oligodendrocyte [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000128])] ! parse: GO:0048716 using "labrum morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00004522]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of labrum are generated and organized. Morphogenesis pertains to the creation of form." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of labrum [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00004522])] [Term] id: GO:0048716 ! labrum morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of FBbt:00004522 ! labrum ! seconds spent parsing GO:0048716: 5.19 ! parse: GO:0048719 using "epistomal sclerite morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00001848]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of epistomal sclerite are generated and organized. Morphogenesis pertains to the creation of form." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of epipharyngeal sclerite [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00001848])] [Term] id: GO:0048719 ! epistomal sclerite morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of FBbt:00001848 ! epipharyngeal sclerite synonym: "epipharyngeal sclerite anatomical structure morphogenesis" EXACT [OBOL:automatic] synonym: "epipharyngeal sclerite morphogenesis" EXACT [OBOL:automatic] ! seconds spent parsing GO:0048719: 5.25 ! parse: GO:0048721 using "clypeus morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00004521]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of clypeus are generated and organized. Morphogenesis pertains to the creation of form." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of clypeus [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00004521])] [Term] id: GO:0048721 ! clypeus morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of FBbt:00004521 ! clypeus ! seconds spent parsing GO:0048721: 5.23 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0048723 using "clypeus development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00004521]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the clypeus over time, from its formation to the mature structure. The clypeus is the shield-shaped plate on an insect's head." ! PROPOSED: developmental process that results_in_complete_developmental_of clypeus [cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00004521])] [Term] id: GO:0048723 ! clypeus development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of FBbt:00004521 ! clypeus ! seconds spent parsing GO:0048723: 4.8 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0048724 using "epistomal sclerite development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00001848]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the epistomal sclerite over time, from its formation to the mature structure." ! PROPOSED: developmental process that results_in_complete_developmental_of epipharyngeal sclerite [cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00001848])] [Term] id: GO:0048724 ! epistomal sclerite development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of FBbt:00001848 ! epipharyngeal sclerite synonym: "epipharyngeal sclerite development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0048724: 4.84 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0048726 using "labrum development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00004522]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the labrum over time, from its formation to the mature structure." ! PROPOSED: developmental process that results_in_complete_developmental_of labrum [cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00004522])] [Term] id: GO:0048726 ! labrum development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of FBbt:00004522 ! labrum ! seconds spent parsing GO:0048726: 4.79 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0048728 using "proboscis development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00004535]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the proboscis over time, from its formation to the mature structure." ! PROPOSED: developmental process that results_in_complete_developmental_of proboscis [cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00004535])] [Term] id: GO:0048728 ! proboscis development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of FBbt:00004535 ! proboscis ! seconds spent parsing GO:0048728: 4.77 ! parse: GO:0048729 using "tissue morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=PO:0009007]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of a tissue are generated and organized. Morphogenesis pertains to the creation of form." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of tissue [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=PO:0009007])] [Term] id: GO:0048729 ! tissue morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of PO:0009007 ! tissue ! seconds spent parsing GO:0048729: 5.19 ! parse: GO:0048730 using "epidermis morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00004993]) [-2] ! parse: GO:0048730 using "epidermis morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000153]) [-2] ! parse: GO:0048730 using "epidermis morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=PO:0005679]) [-2] ! parse: GO:0048730 using "epidermis morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0000105]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of the epidermis are generated and organized. Morphogenesis pertains to the creation of form. The epidermis is the outer epithelial layer of a plant or animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of epidermis [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0000105])] [Term] id: GO:0048730 ! epidermis morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0000105 ! epidermis ! seconds spent parsing GO:0048730: 8.38 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0048732 using "gland development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(gland, anatomy)]) [-6] ! no existing xp def ! def: "The process whose specific outcome is the progression of a gland over time, from its formation to the mature structure. A gland is an organ specialised for secretion." ! PROPOSED: developmental process that results_in_complete_developmental_of anon(gland, anatomy) [cdef(GO:0032502, [results_in_complete_developmental_of=anon(gland, anatomy)])] [Term] id: GO:0048732 ! gland development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of anatomy:gland ! seconds spent parsing GO:0048732: 0.09 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0048733 using "sebaceous gland development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0002565]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the sebaceous gland over time, from its formation to the mature structure." ! PROPOSED: developmental process that results_in_complete_developmental_of sebaceous gland [cdef(GO:0032502, [results_in_complete_developmental_of=MA:0002565])] [Term] id: GO:0048733 ! sebaceous gland development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of MA:0002565 ! sebaceous gland ! seconds spent parsing GO:0048733: 4.81 ! parse: GO:0048734 using "proboscis morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00004535]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of the proboscis are generated and organized. Morphogenesis pertains to the creation of form. The proboscis is the trunk-like extension of the mouthparts on the adult head." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of proboscis [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00004535])] [Term] id: GO:0048734 ! proboscis morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of FBbt:00004535 ! proboscis ! seconds spent parsing GO:0048734: 5.2 ! parse: GO:0048735 using "haltere morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00004783]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of a haltere are generated and organized. Morphogenesis pertains to the creation of form." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of haltere [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00004783])] [Term] id: GO:0048735 ! haltere morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of FBbt:00004783 ! haltere ! seconds spent parsing GO:0048735: 5.2 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0048737 using "imaginal disc-derived appendage development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(- derived appendage, anatomy), OBO_REL:unfolds_in=FBbt:00001761]) [-21] ! parse: GO:0048737 using "imaginal disc-derived appendage development" => cdef(GO:0048736, [OBO_REL:results_in_developmental_progression_of=anon(- derived, anatomy), OBO_REL:unfolds_in=FBbt:00001761]) [-11] ! no existing xp def ! def: "The process whose specific outcome is the progression of an appendage over time, from its formation in the imaginal disc to the mature structure. An appendage is an organ or part that is attached to the trunk of an organism." ! PROPOSED: appendage development that OBO_REL:results_in_developmental_progression_of anon(- derived, anatomy) and OBO_REL:unfolds_in imaginal disc [cdef(GO:0048736, [OBO_REL:results_in_developmental_progression_of=anon(- derived, anatomy), OBO_REL:unfolds_in=FBbt:00001761])] [Term] id: GO:0048737 ! imaginal disc-derived appendage development intersection_of: GO:0048736 ! appendage development intersection_of: OBO_REL:results_in_developmental_progression_of anatomy:-_derived intersection_of: OBO_REL:unfolds_in FBbt:00001761 ! imaginal disc synonym: "imaginal disk-derived appendage development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0048737: 18.27 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0048738 using "cardiac muscle development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000164]) [-2] ! parse: GO:0048738 using "cardiac muscle development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0001319]) [-2] ! parse: GO:0048738 using "heart muscle development" => cdef(GO:0007517, [OBO_REL:results_in_developmental_progression_of=MA:0000072]) [-2] ! parse: GO:0048738 using "heart muscle development" => cdef(GO:0007517, [OBO_REL:results_in_developmental_progression_of=ZFA:0000114]) [-2] ! parse: GO:0048738 using "heart muscle development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=MA:0000015, OBO_REL:unfolds_in=MA:0000072]) [-3] ! parse: GO:0048738 using "heart muscle development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=MA:0000015, OBO_REL:unfolds_in=ZFA:0000114]) [-3] ! parse: GO:0048738 using "heart muscle development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=ZFA:0000548, OBO_REL:unfolds_in=MA:0000072]) [-3] ! parse: GO:0048738 using "heart muscle development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=ZFA:0000548, OBO_REL:unfolds_in=ZFA:0000114]) [-3] ! parse: GO:0048738 using "heart muscle development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000015, OBO_REL:unfolds_in=MA:0000072]) [-3] ! parse: GO:0048738 using "heart muscle development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000015, OBO_REL:unfolds_in=ZFA:0000114]) [-3] ! parse: GO:0048738 using "heart muscle development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000548, OBO_REL:unfolds_in=MA:0000072]) [-3] ! parse: GO:0048738 using "heart muscle development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000548, OBO_REL:unfolds_in=ZFA:0000114]) [-3] ! parse: GO:0048738 using "heart muscle development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(MA:0000015, [OBO_REL:part_of=MA:0000072])]) [-3] ! parse: GO:0048738 using "heart muscle development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(MA:0000015, [OBO_REL:part_of=ZFA:0000114])]) [-3] ! parse: GO:0048738 using "heart muscle development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(ZFA:0000548, [OBO_REL:part_of=MA:0000072])]) [-3] ! parse: GO:0048738 using "heart muscle development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(ZFA:0000548, [OBO_REL:part_of=ZFA:0000114])]) [-3] ! no existing xp def ! def: "The process whose specific outcome is the progression of cardiac muscle over time, from its formation to the mature structure." ! PROPOSED: developmental process that results_in_complete_developmental_of myocardium [cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0001319])] [Term] id: GO:0048738 ! cardiac muscle development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of ZFA:0001319 ! myocardium synonym: "myocardium development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0048738: 15.54 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0048739 using "cardiac muscle fiber development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(fiber, anatomy), OBO_REL:unfolds_in=MA:0000164]) [-7] ! parse: GO:0048739 using "cardiac muscle fiber development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(fiber, anatomy), OBO_REL:unfolds_in=ZFA:0001319]) [-7] ! parse: GO:0048739 using "cardiac muscle fibre development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(fibre, anatomy), OBO_REL:unfolds_in=MA:0000164]) [-7] ! parse: GO:0048739 using "cardiac muscle fibre development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(fibre, anatomy), OBO_REL:unfolds_in=ZFA:0001319]) [-7] ! parse: GO:0048739 using "heart muscle fiber development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=FBbt:00005075, OBO_REL:unfolds_in=MA:0000072]) [-3] ! parse: GO:0048739 using "heart muscle fiber development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=FBbt:00005075, OBO_REL:unfolds_in=ZFA:0000114]) [-3] ! parse: GO:0048739 using "heart muscle fiber development" => cdef(GO:0032502, [and=results_in_complete_developmental_of(anon(fiber, anatomy))/unfolds_in(MA:0000015), OBO_REL:unfolds_in=MA:0000072]) [-3] ! parse: GO:0048739 using "heart muscle fiber development" => cdef(GO:0032502, [and=results_in_complete_developmental_of(anon(fiber, anatomy))/unfolds_in(MA:0000015), OBO_REL:unfolds_in=ZFA:0000114]) [-3] ! parse: GO:0048739 using "heart muscle fiber development" => cdef(GO:0032502, [and=results_in_complete_developmental_of(anon(fiber, anatomy))/unfolds_in(ZFA:0000548), OBO_REL:unfolds_in=MA:0000072]) [-3] ! parse: GO:0048739 using "heart muscle fiber development" => cdef(GO:0032502, [and=results_in_complete_developmental_of(anon(fiber, anatomy))/unfolds_in(ZFA:0000548), OBO_REL:unfolds_in=ZFA:0000114]) [-3] ! parse: GO:0048739 using "heart muscle fiber development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00005075, OBO_REL:unfolds_in=MA:0000072]) [-3] ! parse: GO:0048739 using "heart muscle fiber development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00005075, OBO_REL:unfolds_in=ZFA:0000114]) [-3] ! parse: GO:0048739 using "heart muscle fiber development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(fiber, anatomy), OBO_REL:unfolds_in=cdef(MA:0000015, [OBO_REL:part_of=MA:0000072])]) [-8] ! parse: GO:0048739 using "heart muscle fiber development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(fiber, anatomy), OBO_REL:unfolds_in=cdef(MA:0000015, [OBO_REL:part_of=ZFA:0000114])]) [-8] ! parse: GO:0048739 using "heart muscle fiber development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(fiber, anatomy), OBO_REL:unfolds_in=cdef(ZFA:0000548, [OBO_REL:part_of=MA:0000072])]) [-8] ! parse: GO:0048739 using "heart muscle fiber development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(fiber, anatomy), OBO_REL:unfolds_in=cdef(ZFA:0000548, [OBO_REL:part_of=ZFA:0000114])]) [-8] ! parse: GO:0048739 using "heart muscle fiber development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(FBbt:00005075, [OBO_REL:part_of=MA:0000072])]) [-3] ! parse: GO:0048739 using "heart muscle fiber development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(FBbt:00005075, [OBO_REL:part_of=ZFA:0000114])]) [-3] ! no existing xp def ! def: "The process whose specific outcome is the progression of cardiac muscle fiber over time, from its formation to the mature structure." ! PROPOSED: developmental process that results_in_complete_developmental_of cdef(FBbt:00005075, [OBO_REL:part_of=ZFA:0000114]) [cdef(GO:0032502, [results_in_complete_developmental_of=cdef(FBbt:00005075, [OBO_REL:part_of=ZFA:0000114])])] [Term] id: GO:0048739 ! cardiac muscle fiber development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of heart_muscle_fiber synonym: "muscle fiber of heart development" EXACT [OBOL:automatic] synonym: "muscle fiber of the heart development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0048739: 36.68 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0048740 using "striated muscle fiber development" => cdef(GO:0032502, [results_in_complete_developmental_of=GO:0030016]) [-2] ! parse: GO:0048740 using "striated muscle fibre development" => cdef(GO:0032502, [results_in_complete_developmental_of=GO:0030016]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the amplification and progression of myoblasts (muscle precursor cells) into terminally differentiated multinucleated muscle fibers." ! PROPOSED: developmental process that results_in_complete_developmental_of myofibril [cdef(GO:0032502, [results_in_complete_developmental_of=GO:0030016])] [Term] id: GO:0048740 ! striated muscle fiber development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of GO:0030016 ! myofibril synonym: "myofibril development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0048740: 16.09 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0048741 using "skeletal muscle fiber development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(fiber, anatomy), OBO_REL:unfolds_in=MA:0000165]) [-7] ! parse: GO:0048741 using "skeletal muscle fibre development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(fibre, anatomy), OBO_REL:unfolds_in=MA:0000165]) [-7] ! no existing xp def ! def: "The process whose specific outcome is the progression of the skeletal muscle fiber over time, from its formation to the mature structure." ! PROPOSED: developmental process that results_in_complete_developmental_of anon(fibre, anatomy) and OBO_REL:unfolds_in skeletal muscle [cdef(GO:0032502, [results_in_complete_developmental_of=anon(fibre, anatomy), OBO_REL:unfolds_in=MA:0000165])] [Term] id: GO:0048741 ! skeletal muscle fiber development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of anatomy:fibre intersection_of: OBO_REL:unfolds_in MA:0000165 ! skeletal muscle ! seconds spent parsing GO:0048741: 9.79 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0048745 using "smooth muscle development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000166]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of smooth muscle over time, from its formation to the mature structure." ! PROPOSED: developmental process that results_in_complete_developmental_of smooth muscle [cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000166])] [Term] id: GO:0048745 ! smooth muscle development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of MA:0000166 ! smooth muscle ! seconds spent parsing GO:0048745: 4.89 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0048746 using "smooth muscle fiber development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(fiber, anatomy), OBO_REL:unfolds_in=MA:0000166]) [-7] ! parse: GO:0048746 using "smooth muscle fibre development" => cdef(GO:0032502, [results_in_complete_developmental_of=GO:0030485]) [-2] ! parse: GO:0048746 using "smooth muscle fibre development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(fibre, anatomy), OBO_REL:unfolds_in=MA:0000166]) [-7] ! no existing xp def ! def: "The process whose specific outcome is the progression of smooth muscle fiber over time, from its formation to the mature structure." ! PROPOSED: developmental process that results_in_complete_developmental_of smooth muscle contractile fiber [cdef(GO:0032502, [results_in_complete_developmental_of=GO:0030485])] [Term] id: GO:0048746 ! smooth muscle fiber development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of GO:0030485 ! smooth muscle contractile fiber synonym: "smooth muscle contractile fiber development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0048746: 11.3 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0048747 using "muscle fiber development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00005075]) [-2] ! parse: GO:0048747 using "muscle fiber development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(fiber, anatomy), OBO_REL:unfolds_in=MA:0000015]) [-7] ! parse: GO:0048747 using "muscle fiber development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(fiber, anatomy), OBO_REL:unfolds_in=ZFA:0000548]) [-7] ! parse: GO:0048747 using "muscle fibre development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(fibre, anatomy), OBO_REL:unfolds_in=MA:0000015]) [-7] ! parse: GO:0048747 using "muscle fibre development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(fibre, anatomy), OBO_REL:unfolds_in=ZFA:0000548]) [-7] ! no existing xp def ! def: "The process whose specific outcome is the progression of the muscle fiber over time, from its formation to the mature structure." ! PROPOSED: developmental process that results_in_complete_developmental_of muscle fiber [cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00005075])] [Term] id: GO:0048747 ! muscle fiber development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of FBbt:00005075 ! muscle fiber ! seconds spent parsing GO:0048747: 5.58 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0048749 using "compound eye development" => cdef(GO:0001654, [OBO_REL:results_in_developmental_progression_of=cell:compound]) [-2] ! parse: GO:0048749 using "compound eye development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=FBbt:00004508, OBO_REL:unfolds_in=cell:compound]) [-3] ! parse: GO:0048749 using "compound eye development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=MA:0000261, OBO_REL:unfolds_in=cell:compound]) [-3] ! parse: GO:0048749 using "compound eye development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=ZFA:0000107, OBO_REL:unfolds_in=cell:compound]) [-3] ! parse: GO:0048749 using "compound eye development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00004508]) [-2] ! parse: GO:0048749 using "compound eye development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00004508, OBO_REL:unfolds_in=cell:compound]) [-3] ! parse: GO:0048749 using "compound eye development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000261, OBO_REL:unfolds_in=cell:compound]) [-3] ! parse: GO:0048749 using "compound eye development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000107, OBO_REL:unfolds_in=cell:compound]) [-3] ! no existing xp def ! def: "The process whose specific outcome is the progression of the compound eye over time, from its formation to the mature structure." ! PROPOSED: developmental process that results_in_complete_developmental_of eye [cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00004508])] [Term] id: GO:0048749 ! compound eye development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of FBbt:00004508 ! eye synonym: "eye development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0048749: 25.74 ! parse: GO:0048750 using "compound eye corneal lens morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(corneal lens, anatomy), OBO_REL:unfolds_in=FBbt:00004508]) [-14] ! parse: GO:0048750 using "compound eye corneal lens morphogenesis" => cdef(GO:0009653, [and=results_in_developmental_progression_of(anon(corneal lens, anatomy))/unfolds_in(FBbt:00004508), OBO_REL:unfolds_in=cell:compound]) [-3] ! parse: GO:0048750 using "compound eye corneal lens morphogenesis" => cdef(GO:0009653, [and=results_in_developmental_progression_of(anon(corneal lens, anatomy))/unfolds_in(MA:0000261), OBO_REL:unfolds_in=cell:compound]) [-3] ! parse: GO:0048750 using "compound eye corneal lens morphogenesis" => cdef(GO:0009653, [and=results_in_developmental_progression_of(anon(corneal lens, anatomy))/unfolds_in(ZFA:0000107), OBO_REL:unfolds_in=cell:compound]) [-3] ! no existing xp def ! def: "The process by which the anatomical structures of the compound eye corneal lens are generated and organized. Morphogenesis pertains to the creation of form." ! PROPOSED: anatomical structure morphogenesis that and results_in_developmental_progression_of(anon(corneal lens, anatomy))/unfolds_in(ZFA:0000107) and OBO_REL:unfolds_in compound [cdef(GO:0009653, [and=results_in_developmental_progression_of(anon(corneal lens, anatomy))/unfolds_in(ZFA:0000107), OBO_REL:unfolds_in=cell:compound])] [Term] id: GO:0048750 ! compound eye corneal lens morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: and results_in_developmental_progression_of(anon(corneal lens, anatomy))/unfolds_in(ZFA:0000107) intersection_of: OBO_REL:unfolds_in cell:compound ! compound ! seconds spent parsing GO:0048750: 23.02 ! parse: GO:0048752 using "embryonic semicircular canal morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(embryonic semicircular canal, anatomy)]) [-29] ! parse: GO:0048752 using "embryonic semicircular canal morphogenesis" => cdef(cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000249]), [OBO_REL:part_of=GO:0009790]) [-3] ! parse: GO:0048752 using "embryonic semicircular canal morphogenesis" => cdef(cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0000431]), [OBO_REL:part_of=GO:0009790]) [-3] ! parse: GO:0048752 using "semicircular canal morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000249]) [-2] ! parse: GO:0048752 using "semicircular canal morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0000431]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of the semicircular canals are generated and organized. Morphogenesis pertains to the creation of form." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of semicircular canal [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0000431])] [Term] id: GO:0048752 ! semicircular canal morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0000431 ! semicircular canal synonym: "scc anatomical structure morphogenesis" EXACT [OBOL:automatic] synonym: "scc morphogenesis" EXACT [OBOL:automatic] synonym: "semicircular canals anatomical structure morphogenesis" EXACT [OBOL:automatic] synonym: "semicircular canals morphogenesis" EXACT [OBOL:automatic] synonym: "semicircular duct anatomical structure morphogenesis" EXACT [OBOL:automatic] synonym: "semicircular duct morphogenesis" EXACT [OBOL:automatic] ! seconds spent parsing GO:0048752: 11.03 ! parse: GO:0048753 using "pigment granule organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0048770]) [-2] ! no existing xp def ! def: "A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a pigment granule." ! PROPOSED: cellular component organization and biogenesis that OBO_REL:results_in_structural_change_to pigment granule [cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0048770])] [Term] id: GO:0048753 ! pigment granule organization and biogenesis intersection_of: GO:0016043 ! cellular component organization and biogenesis intersection_of: OBO_REL:results_in_structural_change_to GO:0048770 ! pigment granule synonym: "pigment granule organization" EXACT [OBOL:automatic] ! seconds spent parsing GO:0048753: 0.15 ! No parse for: GO:0048754 branching morphogenesis of a tube ! No parse for: GO:0048755 branching morphogenesis of a nerve ! parse: GO:0048757 using "pigment granule maturation" => cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=FBbt:00004234]) [-2] ! parse: GO:0048757 using "pigment granule maturation" => cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=GO:0048770]) [-2] ! no existing xp def ! def: "Steps required to form a membrane bound organelle into a pigment granule containing pigment. Maturation is a developmental process, independent of morphogenetic (shape) change, that is required for a cell or structure to attain its fully functional state." ! PROPOSED: developmental maturation that OBO_REL:results_in_developmental_progression_of pigment granule [cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=GO:0048770])] [Term] id: GO:0048757 ! pigment granule maturation intersection_of: GO:0021700 ! developmental maturation intersection_of: OBO_REL:results_in_developmental_progression_of GO:0048770 ! pigment granule synonym: "pigment granule developmental maturation" EXACT [OBOL:automatic] ! seconds spent parsing GO:0048757: 6.31 ! Already have xp for: GO:0048758 companion cell differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of companion cell [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000284])] ! parse: GO:0048759 using "vessel element cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(vessel element, cell)]) [-15] ! parse: GO:0048759 using "vessel element cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(vessel element cell, cell)]) [-20] ! parse: GO:0048759 using "vessel member cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000000, OBO_REL:unfolds_in=PO:0002003]) [-3] ! parse: GO:0048759 using "vessel member cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(vessel member, cell)]) [-14] ! parse: GO:0048759 using "vessel member cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(vessel member cell, cell)]) [-19] ! no existing xp def ! def: "The process whereby a relatively unspecialized cell acquires specialized features of a vessel member cell. A vessel member cell is one of the components of a vessel in the xylem. It is a dead cell with the wall between adjacent members being variously perforated and the walls that persist variously thickened." ! PROPOSED: cell differentiation that OBO_REL:results_in_acquisition_of_features_of cell and OBO_REL:unfolds_in vessel member [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000000, OBO_REL:unfolds_in=PO:0002003])] [Term] id: GO:0048759 ! vessel member cell differentiation intersection_of: GO:0030154 ! cell differentiation intersection_of: OBO_REL:results_in_acquisition_of_features_of CL:0000000 ! cell intersection_of: OBO_REL:unfolds_in PO:0002003 ! vessel member ! seconds spent parsing GO:0048759: 12.83 ! parse: GO:0048761 using "collenchyma cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000000, OBO_REL:unfolds_in=PO:0005423]) [-3] ! parse: GO:0048761 using "collenchyma cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(collenchyma, cell)]) [-12] ! parse: GO:0048761 using "collenchyma cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(collenchyma cell, cell)]) [-17] ! no existing xp def ! def: "The process whereby a relatively unspecialized cell acquires specialized features of a collenchyma cell. This is a plant cell in which the primary cell walls are unevenly thickened, with most thickening occuring at the cell corners. Cells are living and able to grow, they are elongated, and lignin and secondary walls absent. Collenchyma cells make up collenchyma tissue which acts as a supporting tissue in growing shoots, leaves and petioles. This tissue is often arranged in cortical ribs, as seen prominently in celery and rhubarb petioles." ! PROPOSED: cell differentiation that OBO_REL:results_in_acquisition_of_features_of cell and OBO_REL:unfolds_in collenchyma [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000000, OBO_REL:unfolds_in=PO:0005423])] [Term] id: GO:0048761 ! collenchyma cell differentiation intersection_of: GO:0030154 ! cell differentiation intersection_of: OBO_REL:results_in_acquisition_of_features_of CL:0000000 ! cell intersection_of: OBO_REL:unfolds_in PO:0005423 ! collenchyma ! seconds spent parsing GO:0048761: 8.55 ! Already have xp for: GO:0048762 mesenchymal cell differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of mesenchymal cell [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000134])] ! Already have xp for: GO:0048764 trichoblast maturation ! CURRENT : developmental maturation that OBO_REL:results_in_developmental_progression_of trichoblast [cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=CL:0000299])] ! parse: GO:0048765 using "root hair cell differentiation" => cdef(GO:0010054, [OBO_REL:results_in_acquisition_of_features_of=anon(root, cell)]) [-5] ! parse: GO:0048765 using "root hair cell differentiation" => cdef(GO:0010054, [OBO_REL:results_in_developmental_progression_of=PO:0009005]) [-2] ! parse: GO:0048765 using "root hair cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000000, OBO_REL:unfolds_in=PO:0000256]) [-3] ! parse: GO:0048765 using "root hair cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000000, OBO_REL:unfolds_in=cdef(FBbt:00005182, [OBO_REL:part_of=PO:0009005])]) [-4] ! parse: GO:0048765 using "root hair cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000299, OBO_REL:unfolds_in=PO:0009005]) [-3] ! parse: GO:0048765 using "root hair cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000374, OBO_REL:unfolds_in=PO:0009005]) [-3] ! parse: GO:0048765 using "root hair cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000855, OBO_REL:unfolds_in=PO:0009005]) [-3] ! parse: GO:0048765 using "root hair cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(root hair, cell)]) [-10] ! parse: GO:0048765 using "root hair cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(root hair cell, cell)]) [-15] ! parse: GO:0048765 using "root hair cell differentiation" => cdef(GO:0030154, [and=results_in_acquisition_of_features_of(CL:0000000)/unfolds_in(FBbt:00005182), OBO_REL:unfolds_in=PO:0009005]) [-3] ! parse: GO:0048765 using "root hair cell differentiation" => cdef(GO:0035315, [OBO_REL:results_in_acquisition_of_features_of=anon(root, cell)]) [-5] ! parse: GO:0048765 using "root hair cell differentiation" => cdef(GO:0035315, [OBO_REL:results_in_developmental_progression_of=PO:0009005]) [-2] ! no existing xp def ! def: "The process whereby a relatively unspecialized cell acquires specialized features of a root hair cell." ! PROPOSED: hair cell differentiation that OBO_REL:results_in_developmental_progression_of root [cdef(GO:0035315, [OBO_REL:results_in_developmental_progression_of=PO:0009005])] [Term] id: GO:0048765 ! root hair cell differentiation intersection_of: GO:0035315 ! hair cell differentiation intersection_of: OBO_REL:results_in_developmental_progression_of PO:0009005 ! root ! seconds spent parsing GO:0048765: 29.66 ! No parse for: GO:0048766 root hair initiation ! No relation defined: results_in_increased_length_of ! No relation defined: results_in_increased_length_of ! No relation defined: results_in_increased_length_of ! parse: GO:0048767 using "root hair elongation" => cdef(GO:0008150, [results_in_increased_length_of=FBbt:00005182, OBO_REL:unfolds_in=PO:0009005]) [-3] ! parse: GO:0048767 using "root hair elongation" => cdef(GO:0008150, [results_in_increased_length_of=PO:0000256]) [-2] ! parse: GO:0048767 using "root hair elongation" => cdef(GO:0008150, [results_in_increased_length_of=cdef(FBbt:00005182, [OBO_REL:part_of=PO:0009005])]) [-3] ! no existing xp def ! def: "The process by which the root hair grows longer." ! PROPOSED: biological_process that results_in_increased_length_of root hair [cdef(GO:0008150, [results_in_increased_length_of=PO:0000256])] [Term] id: GO:0048767 ! root hair elongation intersection_of: GO:0008150 ! biological_process intersection_of: results_in_increased_length_of PO:0000256 ! root hair ! seconds spent parsing GO:0048767: 6.42 ! parse: GO:0048768 using "root hair cell tip growth" => cdef(GO:0009932, [OBO_REL:results_in_increase_in_mass_of=FBbt:00005182, OBO_REL:unfolds_in=PO:0009005]) [-3] ! parse: GO:0048768 using "root hair cell tip growth" => cdef(GO:0009932, [OBO_REL:results_in_increase_in_mass_of=PO:0000256]) [-2] ! parse: GO:0048768 using "root hair cell tip growth" => cdef(GO:0009932, [OBO_REL:results_in_increase_in_mass_of=cdef(FBbt:00005182, [OBO_REL:part_of=PO:0009005])]) [-3] ! parse: GO:0048768 using "root hair cell tip growth" => cdef(GO:0040007, [OBO_REL:results_in_increase_in_mass_of=GO:0051286, OBO_REL:unfolds_in=PO:0000256]) [-3] ! parse: GO:0048768 using "root hair cell tip growth" => cdef(GO:0040007, [OBO_REL:results_in_increase_in_mass_of=GO:0051286, OBO_REL:unfolds_in=cdef(FBbt:00005182, [OBO_REL:part_of=PO:0009005])]) [-4] ! parse: GO:0048768 using "root hair cell tip growth" => cdef(GO:0040007, [and=results_in_increase_in_mass_of(GO:0051286)/unfolds_in(FBbt:00005182), OBO_REL:unfolds_in=PO:0009005]) [-3] ! parse: GO:0048768 using "root hair tip growth" => cdef(GO:0040007, [OBO_REL:results_in_increase_in_mass_of=PO:0000029]) [-2] ! no existing xp def ! def: "Localized growth of a plant root hair tip by extension of the cell wall." ! PROPOSED: growth that OBO_REL:results_in_increase_in_mass_of root hair tip [cdef(GO:0040007, [OBO_REL:results_in_increase_in_mass_of=PO:0000029])] [Term] id: GO:0048768 ! root hair cell tip growth intersection_of: GO:0040007 ! growth intersection_of: OBO_REL:results_in_increase_in_mass_of PO:0000029 ! root hair tip ! seconds spent parsing GO:0048768: 40.33 ! No parse for: GO:0048769 sarcomerogenesis ! No parse for: GO:0048771 tissue remodeling ! Already have xp for: GO:0048772 leucophore differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of leucophore [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000571])] ! Already have xp for: GO:0048773 erythrophore differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of erythrophore [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000574])] ! Already have xp for: GO:0048774 cyanophore differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of cyanophore [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000747])] ! No relation defined: results_in_complete_developmental_of ! parse: GO:0048785 using "hatching gland development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000026]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the hatching gland over time, from its formation to the mature structure. The cells of the hatching gland contain enzymes responsible for solubilization of the egg chorion, facilitating the hatching process." ! PROPOSED: developmental process that results_in_complete_developmental_of hatching gland [cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000026])] [Term] id: GO:0048785 ! hatching gland development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of ZFA:0000026 ! hatching gland synonym: "hgg development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0048785: 5.1 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0048793 using "pronephros development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000151]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the pronephros over time, from its formation to the mature structure. The pronephros is the first of the embryonic kidneys to be established and is the simplest vertebrate excretory organ." ! PROPOSED: developmental process that results_in_complete_developmental_of pronephros [cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000151])] [Term] id: GO:0048793 ! pronephros development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of ZFA:0000151 ! pronephros synonym: "embryonic kidney development" EXACT [OBOL:automatic] synonym: "kidney development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0048793: 4.78 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0048794 using "gas bladder development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000076]) [-2] ! parse: GO:0048794 using "swim bladder development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000076]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the swim bladder over time, from its formation to the mature structure. The swim bladder is used by some fishes to maintain buoyancy and may function in addition as a sound producing organ, a sound receptor, and a respiratory organ." ! PROPOSED: developmental process that results_in_complete_developmental_of swim bladder [cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000076])] [Term] id: GO:0048794 ! swim bladder development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of ZFA:0000076 ! swim bladder ! seconds spent parsing GO:0048794: 9.59 ! parse: GO:0048795 using "gas bladder morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0000076]) [-2] ! parse: GO:0048795 using "swim bladder morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0000076]) [-2] ! no existing xp def ! def: "The process by which the anatomical structure of the swim bladder is generated and organized. Morphogenesis pertains to the creation of form. The swim bladder is used by some fishes to maintain buoyancy and may function in addition as a sound producing organ, a sound receptor, and a respiratory organ." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of swim bladder [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0000076])] [Term] id: GO:0048795 ! swim bladder morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0000076 ! swim bladder ! seconds spent parsing GO:0048795: 10.44 ! parse: GO:0048796 using "gas bladder maturation" => cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=ZFA:0000076]) [-2] ! parse: GO:0048796 using "swim bladder maturation" => cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=ZFA:0000076]) [-2] ! no existing xp def ! def: "A developmental process, independent of morphogenetic (shape) change, that is required for a swim bladder to attain its fully functional state. The swim bladder is used by some fishes to maintain buoyancy and may function in addition as a sound producing organ, a sound receptor, and a respiratory organ." ! PROPOSED: developmental maturation that OBO_REL:results_in_developmental_progression_of swim bladder [cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=ZFA:0000076])] [Term] id: GO:0048796 ! swim bladder maturation intersection_of: GO:0021700 ! developmental maturation intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0000076 ! swim bladder ! seconds spent parsing GO:0048796: 9.72 ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0048797 using "gas bladder biosynthesis" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=ZFA:0000076]) [-2] ! parse: GO:0048797 using "gas bladder formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=ZFA:0000076]) [-2] ! parse: GO:0048797 using "gas bladder formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0000076]) [-2] ! parse: GO:0048797 using "swim bladder formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=ZFA:0000076]) [-2] ! parse: GO:0048797 using "swim bladder formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0000076]) [-2] ! no existing xp def ! def: "The process that gives rise to the swim bladder. This process pertains to the initial formation of a structure from unspecified parts. The swim bladder is used by some fishes to maintain buoyancy and may function in addition as a sound producing organ, a sound receptor, and a respiratory organ." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of swim bladder [cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0000076])] [Term] id: GO:0048797 ! swim bladder formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of ZFA:0000076 ! swim bladder ! seconds spent parsing GO:0048797: 15.76 ! No parse for: GO:0048798 swim bladder inflation ! parse: GO:0048799 using "organ maturation" => cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=PO:0009008]) [-2] ! parse: GO:0048799 using "organ maturation" => cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=ZFA:0000496]) [-2] ! no existing xp def ! def: "A developmental process, independent of morphogenetic (shape) change, that is required for an organ to attain its fully functional state. An organ is a tissue or set of tissues that work together to perform a specific function or functions." ! PROPOSED: developmental maturation that OBO_REL:results_in_developmental_progression_of compound organ [cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=ZFA:0000496])] [Term] id: GO:0048799 ! organ maturation intersection_of: GO:0021700 ! developmental maturation intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0000496 ! compound organ synonym: "compound organ developmental maturation" EXACT [OBOL:automatic] synonym: "compound organ maturation" EXACT [OBOL:automatic] ! seconds spent parsing GO:0048799: 5.42 ! parse: GO:0048802 using "notum morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00004580]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of dorsal part of the body are generated and organized. Morphogenesis pertains to the creation of form." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of mesothoracic tergum [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00004580])] [Term] id: GO:0048802 ! notum morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of FBbt:00004580 ! mesothoracic tergum synonym: "mesothoracic tergum anatomical structure morphogenesis" EXACT [OBOL:automatic] synonym: "mesothoracic tergum morphogenesis" EXACT [OBOL:automatic] ! seconds spent parsing GO:0048802: 5.22 ! parse: GO:0048803 using "imaginal disc-derived male genitalia morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00004826, OBO_REL:unfolds_in=cdef(FBbt:00001761, [OBO_REL:derives_from=cell:male])]) [-4] ! parse: GO:0048803 using "imaginal disc-derived male genitalia morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00004826, OBO_REL:unfolds_in=cdef(cell:male, [OBO_REL:derives_from=FBbt:00001761])]) [-4] ! parse: GO:0048803 using "imaginal disc-derived male genitalia morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(- derived male genitalia, anatomy), OBO_REL:unfolds_in=FBbt:00001761]) [-26] ! parse: GO:0048803 using "imaginal disc-derived male genitalia morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=cdef(FBbt:00001761, [OBO_REL:derives_from=FBbt:00004828])]) [-3] ! parse: GO:0048803 using "imaginal disc-derived male genitalia morphogenesis" => cdef(GO:0035112, [OBO_REL:results_in_developmental_progression_of=anon(- derived male, anatomy), OBO_REL:unfolds_in=FBbt:00001761]) [-16] ! parse: GO:0048803 using "imaginal disc-derived male genitalia morphogenesis" => cdef(GO:0035112, [OBO_REL:results_in_developmental_progression_of=cdef(FBbt:00001761, [OBO_REL:derives_from=cell:male])]) [-3] ! parse: GO:0048803 using "imaginal disc-derived male genitalia morphogenesis" => cdef(GO:0035112, [OBO_REL:results_in_developmental_progression_of=cdef(cell:male, [OBO_REL:derives_from=FBbt:00001761])]) [-3] ! parse: GO:0048803 using "imaginal disc-derived male genitalia morphogenesis" => cdef(GO:0048808, [OBO_REL:results_in_developmental_progression_of=anon(- derived, anatomy), OBO_REL:unfolds_in=FBbt:00001761]) [-11] ! parse: GO:0048803 using "male genital morphogenesis (sensu Endopterygota)" => cdef(GO:0048805, [OBO_REL:results_in_developmental_progression_of=cell:male]) [-2] ! parse: GO:0048803 using "male genitalia morphogenesis (sensu Endopterygota)" => cdef(GO:0048805, [OBO_REL:results_in_developmental_progression_of=cell:male]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of male genitalia are generated and organized from the genital imaginal disc. Morphogenesis pertains to the creation of form." ! PROPOSED: imaginal disc-derived genitalia morphogenesis that OBO_REL:results_in_developmental_progression_of male [cdef(GO:0048805, [OBO_REL:results_in_developmental_progression_of=cell:male])] [Term] id: GO:0048803 ! imaginal disc-derived male genitalia morphogenesis intersection_of: GO:0048805 ! imaginal disc-derived genitalia morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of cell:male ! male synonym: "male imaginal disc-derived genitalia morphogenesis" EXACT [OBOL:automatic] ! seconds spent parsing GO:0048803: 44.22 ! parse: GO:0048804 using "female genital morphogenesis (sensu Endopterygota)" => cdef(GO:0048805, [OBO_REL:results_in_developmental_progression_of=cell:female]) [-2] ! parse: GO:0048804 using "female genitalia morphogenesis (sensu Endopterygota)" => cdef(GO:0048805, [OBO_REL:results_in_developmental_progression_of=cell:female]) [-2] ! parse: GO:0048804 using "imaginal disc-derived female genitalia morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00004826, OBO_REL:unfolds_in=cdef(FBbt:00001761, [OBO_REL:derives_from=cell:female])]) [-4] ! parse: GO:0048804 using "imaginal disc-derived female genitalia morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00004826, OBO_REL:unfolds_in=cdef(cell:female, [OBO_REL:derives_from=FBbt:00001761])]) [-4] ! parse: GO:0048804 using "imaginal disc-derived female genitalia morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(- derived female genitalia, anatomy), OBO_REL:unfolds_in=FBbt:00001761]) [-28] ! parse: GO:0048804 using "imaginal disc-derived female genitalia morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=cdef(FBbt:00001761, [OBO_REL:derives_from=FBbt:00004827])]) [-3] ! parse: GO:0048804 using "imaginal disc-derived female genitalia morphogenesis" => cdef(GO:0035112, [OBO_REL:results_in_developmental_progression_of=anon(- derived female, anatomy), OBO_REL:unfolds_in=FBbt:00001761]) [-18] ! parse: GO:0048804 using "imaginal disc-derived female genitalia morphogenesis" => cdef(GO:0035112, [OBO_REL:results_in_developmental_progression_of=cdef(FBbt:00001761, [OBO_REL:derives_from=cell:female])]) [-3] ! parse: GO:0048804 using "imaginal disc-derived female genitalia morphogenesis" => cdef(GO:0035112, [OBO_REL:results_in_developmental_progression_of=cdef(cell:female, [OBO_REL:derives_from=FBbt:00001761])]) [-3] ! parse: GO:0048804 using "imaginal disc-derived female genitalia morphogenesis" => cdef(GO:0048807, [OBO_REL:results_in_developmental_progression_of=anon(- derived, anatomy), OBO_REL:unfolds_in=FBbt:00001761]) [-11] ! no existing xp def ! def: "The process by which the anatomical structures of female genitalia are generated and organized from the genital disc. Morphogenesis pertains to the creation of form." ! PROPOSED: imaginal disc-derived genitalia morphogenesis that OBO_REL:results_in_developmental_progression_of female [cdef(GO:0048805, [OBO_REL:results_in_developmental_progression_of=cell:female])] [Term] id: GO:0048804 ! imaginal disc-derived female genitalia morphogenesis intersection_of: GO:0048805 ! imaginal disc-derived genitalia morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of cell:female ! female synonym: "female imaginal disc-derived genitalia morphogenesis" EXACT [OBOL:automatic] ! seconds spent parsing GO:0048804: 34.12 ! parse: GO:0048805 using "imaginal disc-derived genitalia morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(- derived genitalia, anatomy), OBO_REL:unfolds_in=FBbt:00001761]) [-21] ! parse: GO:0048805 using "imaginal disc-derived genitalia morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=cdef(FBbt:00001761, [OBO_REL:derives_from=FBbt:00004826])]) [-3] ! parse: GO:0048805 using "imaginal disc-derived genitalia morphogenesis" => cdef(GO:0035112, [OBO_REL:results_in_developmental_progression_of=anon(- derived, anatomy), OBO_REL:unfolds_in=FBbt:00001761]) [-11] ! no existing xp def ! def: "The process by which the anatomical structures of genitalia are generated and organized from the genital imaginal disc. Morphogenesis pertains to the creation of form." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of cdef(FBbt:00001761, [OBO_REL:derives_from=FBbt:00004826]) [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=cdef(FBbt:00001761, [OBO_REL:derives_from=FBbt:00004826])])] [Term] id: GO:0048805 ! imaginal disc-derived genitalia morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of imaginal_disc_-_derived_genitalia synonym: "imaginal disk-derived genitalia morphogenesis" EXACT [OBOL:automatic] ! seconds spent parsing GO:0048805: 14.85 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0048806 using "genital development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(genital, anatomy)]) [-8] ! parse: GO:0048806 using "genitalia development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00004826]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the genitalia over time, from its formation to the mature structure." ! PROPOSED: developmental process that results_in_complete_developmental_of genitalia [cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00004826])] [Term] id: GO:0048806 ! genitalia development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of FBbt:00004826 ! genitalia ! seconds spent parsing GO:0048806: 0.17 ! parse: GO:0048807 using "female genital morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(genital, anatomy), OBO_REL:unfolds_in=cell:female]) [-9] ! parse: GO:0048807 using "female genital morphogenesis" => cdef(GO:0035112, [OBO_REL:results_in_developmental_progression_of=cell:female]) [-2] ! parse: GO:0048807 using "female genitalia morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00004826, OBO_REL:unfolds_in=cell:female]) [-3] ! parse: GO:0048807 using "female genitalia morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00004827]) [-2] ! parse: GO:0048807 using "female genitalia morphogenesis" => cdef(GO:0035112, [OBO_REL:results_in_developmental_progression_of=cell:female]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of female genitalia are generated and organized. Morphogenesis pertains to the creation of form." ! PROPOSED: genitalia morphogenesis that OBO_REL:results_in_developmental_progression_of female [cdef(GO:0035112, [OBO_REL:results_in_developmental_progression_of=cell:female])] [Term] id: GO:0048807 ! female genitalia morphogenesis intersection_of: GO:0035112 ! genitalia morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of cell:female ! female ! seconds spent parsing GO:0048807: 13.57 ! parse: GO:0048808 using "male genital morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(genital, anatomy), OBO_REL:unfolds_in=cell:male]) [-9] ! parse: GO:0048808 using "male genital morphogenesis" => cdef(GO:0035112, [OBO_REL:results_in_developmental_progression_of=cell:male]) [-2] ! parse: GO:0048808 using "male genitalia morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00004826, OBO_REL:unfolds_in=cell:male]) [-3] ! parse: GO:0048808 using "male genitalia morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00004828]) [-2] ! parse: GO:0048808 using "male genitalia morphogenesis" => cdef(GO:0035112, [OBO_REL:results_in_developmental_progression_of=cell:male]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of male genitalia are generated and organized. Morphogenesis pertains to the creation of form." ! PROPOSED: genitalia morphogenesis that OBO_REL:results_in_developmental_progression_of male [cdef(GO:0035112, [OBO_REL:results_in_developmental_progression_of=cell:male])] [Term] id: GO:0048808 ! male genitalia morphogenesis intersection_of: GO:0035112 ! genitalia morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of cell:male ! male ! seconds spent parsing GO:0048808: 13.42 ! parse: GO:0048809 using "analia morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00004823]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of analia are generated and organized. Morphogenesis pertains to the creation of form. The analia is the posterior-most vertral appendage that develops from the genital disc. As in, but not restricted to, the Holometabola (Endopterygota, ncbi_taxonomy_id:33392)." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of analia [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00004823])] [Term] id: GO:0048809 ! analia morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of FBbt:00004823 ! analia ! seconds spent parsing GO:0048809: 10.7 ! parse: GO:0048810 using "female analia morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00004823, OBO_REL:unfolds_in=cell:female]) [-3] ! parse: GO:0048810 using "female analia morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00004824]) [-2] ! parse: GO:0048810 using "female analia morphogenesis" => cdef(GO:0048809, [OBO_REL:results_in_developmental_progression_of=cell:female]) [-2] ! parse: GO:0048810 using "female analia morphogenesis (sensu Endopterygota)" => cdef(GO:0048809, [OBO_REL:results_in_developmental_progression_of=cell:female]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of the analia of the female are generated and organized. The analia is the posterior-most vertral appendage that develops from the genital disc. Morphogenesis pertains to the creation of form. As in, but not restricted to, the Holometabola (Endopterygota, ncbi_taxonomy_id:33392)." ! PROPOSED: analia morphogenesis that OBO_REL:results_in_developmental_progression_of female [cdef(GO:0048809, [OBO_REL:results_in_developmental_progression_of=cell:female])] [Term] id: GO:0048810 ! female analia morphogenesis intersection_of: GO:0048809 ! analia morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of cell:female ! female ! seconds spent parsing GO:0048810: 16.76 ! parse: GO:0048811 using "male analia morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00004823, OBO_REL:unfolds_in=cell:male]) [-3] ! parse: GO:0048811 using "male analia morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00004825]) [-2] ! parse: GO:0048811 using "male analia morphogenesis" => cdef(GO:0048809, [OBO_REL:results_in_developmental_progression_of=cell:male]) [-2] ! parse: GO:0048811 using "male analia morphogenesis (sensu Endopterygota)" => cdef(GO:0048809, [OBO_REL:results_in_developmental_progression_of=cell:male]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of the analia of the male are generated and organized. The analia is the posterior-most vertral appendage that develops from the genital disc. Morphogenesis pertains to the creation of form. As in, but not restricted to, the Holometabola (Endopterygota, ncbi_taxonomy_id:33392)." ! PROPOSED: analia morphogenesis that OBO_REL:results_in_developmental_progression_of male [cdef(GO:0048809, [OBO_REL:results_in_developmental_progression_of=cell:male])] [Term] id: GO:0048811 ! male analia morphogenesis intersection_of: GO:0048809 ! analia morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of cell:male ! male ! seconds spent parsing GO:0048811: 16.5 ! parse: GO:0048812 using "neurite morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00005113]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of neurites are generated and organized. Morphogenesis pertains to the creation of form. A neurite is any process extending from a neural cell, such as axons or dendrites." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of neurite [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00005113])] [Term] id: GO:0048812 ! neurite morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of FBbt:00005113 ! neurite ! seconds spent parsing GO:0048812: 5.21 ! parse: GO:0048813 using "dendrite morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00005110]) [-2] ! parse: GO:0048813 using "dendrite morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=GO:0030425]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of dendrite are generated and organized. Morphogenesis pertains to the creation of form. A dendrite is a freely branching protoplasmic process of a nerve cell." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of dendrite [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=GO:0030425])] [Term] id: GO:0048813 ! dendrite morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of GO:0030425 ! dendrite synonym: "dendrite anatomical structure morphogenesis" EXACT [OBOL:automatic] ! seconds spent parsing GO:0048813: 7.26 ! parse: GO:0048816 using "ocellus morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00004505]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of the ocellus are generated and organized. Morphogenesis pertains to the creation of form. The ocellus is a simple visual organ of insects." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of ocellus [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00004505])] [Term] id: GO:0048816 ! ocellus morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of FBbt:00004505 ! ocellus ! seconds spent parsing GO:0048816: 5.19 ! parse: GO:0048820 using "hair follicle maturation" => cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=FBbt:00004894, OBO_REL:unfolds_in=FBbt:00005182]) [-3] ! parse: GO:0048820 using "hair follicle maturation" => cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=MA:0000154]) [-2] ! parse: GO:0048820 using "hair follicle maturation" => cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=cdef(FBbt:00004894, [OBO_REL:part_of=FBbt:00005182])]) [-3] ! no existing xp def ! def: "A developmental process, independent of morphogenetic (shape) change, that is required for a hair follicle to attain its fully functional state." ! PROPOSED: developmental maturation that OBO_REL:results_in_developmental_progression_of hair follicle [cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=MA:0000154])] [Term] id: GO:0048820 ! hair follicle maturation intersection_of: GO:0021700 ! developmental maturation intersection_of: OBO_REL:results_in_developmental_progression_of MA:0000154 ! hair follicle ! seconds spent parsing GO:0048820: 10.77 ! Already have xp for: GO:0048823 nucleate erythrocyte development ! CURRENT : developmental process that OBO_REL:results_in_developmental_progression_of nucleate erythrocyte [cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=CL:0000562])] ! Already have xp for: GO:0048824 pigment cell precursor differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of pigment_cell_precursor [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=pigment_cell_precursor])] ! No relation defined: results_in_complete_developmental_of ! parse: GO:0048825 using "cotyledon development" => cdef(GO:0032502, [results_in_complete_developmental_of=PO:0020030]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the cotyledon over time, from its formation to the mature structure. The cotyledon is the modified leaf (seed leaf), found as part of the embryo in plant seeds. It is involved in either storage or absorption of food reserves. Dicotyledonous seeds contain two cotyledons, while monocotyledonous seeds contain only one. The cotyledons may appear above ground and show photosynthetic activity in the seedling." ! PROPOSED: developmental process that results_in_complete_developmental_of cotyledon [cdef(GO:0032502, [results_in_complete_developmental_of=PO:0020030])] [Term] id: GO:0048825 ! cotyledon development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of PO:0020030 ! cotyledon ! seconds spent parsing GO:0048825: 4.76 ! parse: GO:0048826 using "cotyledon morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=PO:0020030]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of the cotyledon are generated and organized. Morphogenesis pertains to the creation of form. The cotyledon is the modified leaf (seed leaf), found as part of the embryo in plant seeds. It is involved in either storage or absorption of food reserves. Dicotyledonous seeds contain two cotyledons, while monocotyledonous seeds contain only one. The cotyledons may appear above ground and show photosynthetic activity in the seedling." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of cotyledon [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=PO:0020030])] [Term] id: GO:0048826 ! cotyledon morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of PO:0020030 ! cotyledon ! seconds spent parsing GO:0048826: 5.2 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0048827 using "phyllome development" => cdef(GO:0032502, [results_in_complete_developmental_of=PO:0006001]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of a phyllome over time, from its formation to the mature structure. A phyllome is a collective term for all the different types of leaves appearing on plants." ! PROPOSED: developmental process that results_in_complete_developmental_of phyllome [cdef(GO:0032502, [results_in_complete_developmental_of=PO:0006001])] [Term] id: GO:0048827 ! phyllome development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of PO:0006001 ! phyllome ! seconds spent parsing GO:0048827: 4.78 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0048829 using "root cap development" => cdef(GO:0032502, [results_in_complete_developmental_of=PO:0020123]) [-2] ! parse: GO:0048829 using "root cap development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(cap, anatomy), OBO_REL:unfolds_in=PO:0009005]) [-5] ! no existing xp def ! def: "The process whose specific outcome is the progression of the root cap over time, from its formation to the mature structure. The root cap protects the root meristem from friction as the root grows through the soil. The cap is made up of a group of parenchyma cells which secrete a glycoprotein mucilage as a lubricant." ! PROPOSED: developmental process that results_in_complete_developmental_of root cap [cdef(GO:0032502, [results_in_complete_developmental_of=PO:0020123])] [Term] id: GO:0048829 ! root cap development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of PO:0020123 ! root cap ! seconds spent parsing GO:0048829: 9.41 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0048830 using "adventitious root development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(adventitious root, anatomy)]) [-18] ! parse: GO:0048830 using "adventitious root development" => cdef(GO:0048364, [OBO_REL:results_in_developmental_progression_of=anon(adventitious, anatomy)]) [-13] ! no existing xp def ! def: "The process whose specific outcome is the progression of adventitious root over time, from its formation to the mature structure. Adventitious roots are post-embryonic roots that develop from the plant shoot." ! PROPOSED: root development that OBO_REL:results_in_developmental_progression_of anon(adventitious, anatomy) [cdef(GO:0048364, [OBO_REL:results_in_developmental_progression_of=anon(adventitious, anatomy)])] [Term] id: GO:0048830 ! adventitious root development intersection_of: GO:0048364 ! root development intersection_of: OBO_REL:results_in_developmental_progression_of anatomy:adventitious ! seconds spent parsing GO:0048830: 4.45 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0048839 using "inner ear development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000237]) [-2] ! parse: GO:0048839 using "inner ear development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000217]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the inner ear over time, from its formation to the mature structure." ! PROPOSED: developmental process that results_in_complete_developmental_of inner ear [cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000217])] [Term] id: GO:0048839 ! inner ear development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of ZFA:0000217 ! inner ear synonym: "ear development" EXACT [OBOL:automatic] synonym: "otic capsule development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0048839: 5.56 ! parse: GO:0048844 using "arterial morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(arterial, anatomy)]) [-9] ! parse: GO:0048844 using "artery morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000064]) [-2] ! parse: GO:0048844 using "artery morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0000005]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of arterial blood vessels are generated and organized. Morphogenesis pertains to the creation of form. Arteries are blood vessels that transport blood from the heart to the body and its organs." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of artery [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0000005])] [Term] id: GO:0048844 ! artery morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0000005 ! artery synonym: "arterial system anatomical structure morphogenesis" EXACT [OBOL:automatic] synonym: "arterial system morphogenesis" EXACT [OBOL:automatic] ! seconds spent parsing GO:0048844: 10.63 ! parse: GO:0048845 using "venous blood vessel morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000066]) [-2] ! parse: GO:0048845 using "venous morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(venous, anatomy)]) [-7] ! no existing xp def ! def: "The process by which the anatomical structures of venous blood vessels are generated and organized. Morphogenesis pertains to the creation of form. Veins are blood vessels that transport blood from the body and its organs to the heart." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of venous blood vessel [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000066])] [Term] id: GO:0048845 ! venous blood vessel morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of MA:0000066 ! venous blood vessel ! seconds spent parsing GO:0048845: 9.62 ! Already have xp for: GO:0048846 axon extension involved in axon guidance ! CURRENT : axon extension that OBO_REL:part_of axon guidance [cdef(GO:0048675, [OBO_REL:part_of=GO:0007411])] ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0048847 using "adenohypophysis formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=MA:0000177]) [-2] ! parse: GO:0048847 using "adenohypophysis formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=ZFA:0001282]) [-2] ! parse: GO:0048847 using "adenohypophysis formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=MA:0000177]) [-2] ! parse: GO:0048847 using "adenohypophysis formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0001282]) [-2] ! parse: GO:0048847 using "adenophysis formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(adenophysis, anatomy)]) [-12] ! parse: GO:0048847 using "anterior pituitary biosynthesis" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=ZFA:0001282]) [-2] ! parse: GO:0048847 using "anterior pituitary formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=ZFA:0001282]) [-2] ! parse: GO:0048847 using "anterior pituitary formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0001282]) [-2] ! parse: GO:0048847 using "anterior pituitary gland formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(gland, anatomy), OBO_REL:unfolds_in=ZFA:0001282]) [-7] ! no existing xp def ! def: "The process that gives rise to adenohypophysis. This process pertains to the initial formation of a structure from unspecified parts. The adenohypophysis is the anterior part of the pituitary. It secretes a variety of hormones and its function is regulated by the hypothalamus." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of adenohypophysis [cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0001282])] [Term] id: GO:0048847 ! adenohypophysis formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of ZFA:0001282 ! adenohypophysis ! seconds spent parsing GO:0048847: 44.45 ! parse: GO:0048848 using "neurohypophysis morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000178]) [-2] ! parse: GO:0048848 using "neurohypophysis morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0001271]) [-2] ! parse: GO:0048848 using "neurophysis morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(neurophysis, anatomy)]) [-12] ! parse: GO:0048848 using "posterior pituitary gland morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(gland, anatomy), OBO_REL:unfolds_in=ZFA:0001271]) [-7] ! parse: GO:0048848 using "posterior pituitary gland morphogenesis" => cdef(GO:0022612, [OBO_REL:results_in_developmental_progression_of=ZFA:0001271]) [-2] ! parse: GO:0048848 using "posterior pituitary morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0001271]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of neurohypophysis are generated and organized. Morphogenesis pertains to the creation of form. The neurohypophysis is the part of the pituitary gland that secretes hormones involved in blood pressure regulation." ! PROPOSED: gland morphogenesis that OBO_REL:results_in_developmental_progression_of neurohypophysis [cdef(GO:0022612, [OBO_REL:results_in_developmental_progression_of=ZFA:0001271])] [Term] id: GO:0048848 ! neurohypophysis morphogenesis intersection_of: GO:0022612 ! gland morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0001271 ! neurohypophysis ! seconds spent parsing GO:0048848: 21.71 ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0048849 using "neurohypophysis formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=MA:0000178]) [-2] ! parse: GO:0048849 using "neurohypophysis formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=ZFA:0001271]) [-2] ! parse: GO:0048849 using "neurohypophysis formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=MA:0000178]) [-2] ! parse: GO:0048849 using "neurohypophysis formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0001271]) [-2] ! parse: GO:0048849 using "neurophysis formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(neurophysis, anatomy)]) [-12] ! parse: GO:0048849 using "posterior pituitary biosynthesis" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=ZFA:0001271]) [-2] ! parse: GO:0048849 using "posterior pituitary formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=ZFA:0001271]) [-2] ! parse: GO:0048849 using "posterior pituitary formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0001271]) [-2] ! parse: GO:0048849 using "posterior pituitary gland formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(gland, anatomy), OBO_REL:unfolds_in=ZFA:0001271]) [-7] ! no existing xp def ! def: "The process that gives rise to neurohypophysis. This process pertains to the initial formation of a structure from unspecified parts. The neurohypophysis is the part of the pituitary gland that secretes hormones involved in blood pressure regulation." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of neurohypophysis [cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0001271])] [Term] id: GO:0048849 ! neurohypophysis formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of ZFA:0001271 ! neurohypophysis ! seconds spent parsing GO:0048849: 36.34 ! parse: GO:0048850 using "hypophysis morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00002719]) [-2] ! parse: GO:0048850 using "hypophysis morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=PO:0020109]) [-2] ! parse: GO:0048850 using "hypophysis morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0000118]) [-2] ! parse: GO:0048850 using "pituitary gland morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000176]) [-2] ! parse: GO:0048850 using "pituitary gland morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(gland, anatomy), OBO_REL:unfolds_in=ZFA:0000118]) [-7] ! parse: GO:0048850 using "pituitary gland morphogenesis" => cdef(GO:0022612, [OBO_REL:results_in_developmental_progression_of=ZFA:0000118]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of the hypophysis are generated and organized. Morphogenesis pertains to the creation of form. The pituitary gland is an endocrine gland that secretes hormones that regulate many other glands." ! PROPOSED: gland morphogenesis that OBO_REL:results_in_developmental_progression_of hypophysis [cdef(GO:0022612, [OBO_REL:results_in_developmental_progression_of=ZFA:0000118])] [Term] id: GO:0048850 ! hypophysis morphogenesis intersection_of: GO:0022612 ! gland morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0000118 ! hypophysis ! seconds spent parsing GO:0048850: 13.61 ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0048851 using "hypophysis biosynthesis" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=FBbt:00002719]) [-2] ! parse: GO:0048851 using "hypophysis biosynthesis" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=PO:0020109]) [-2] ! parse: GO:0048851 using "hypophysis biosynthesis" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=ZFA:0000118]) [-2] ! parse: GO:0048851 using "hypophysis formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=FBbt:00002719]) [-2] ! parse: GO:0048851 using "hypophysis formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=PO:0020109]) [-2] ! parse: GO:0048851 using "hypophysis formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=ZFA:0000118]) [-2] ! parse: GO:0048851 using "hypophysis formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=FBbt:00002719]) [-2] ! parse: GO:0048851 using "hypophysis formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=PO:0020109]) [-2] ! parse: GO:0048851 using "hypophysis formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0000118]) [-2] ! parse: GO:0048851 using "pituitary gland biosynthesis" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=MA:0000176]) [-2] ! parse: GO:0048851 using "pituitary gland formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=MA:0000176]) [-2] ! parse: GO:0048851 using "pituitary gland formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=MA:0000176]) [-2] ! parse: GO:0048851 using "pituitary gland formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(gland, anatomy), OBO_REL:unfolds_in=ZFA:0000118]) [-7] ! no existing xp def ! def: "The process by which the anatomical structures of the hypophysis are generated and organized. Morphogenesis pertains to the creation of form. The hypophysis is an endocrine gland that secretes hormones that regulate many other glands." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of hypophysis [cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0000118])] [Term] id: GO:0048851 ! hypophysis formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of ZFA:0000118 ! hypophysis ! seconds spent parsing GO:0048851: 26.58 ! parse: GO:0048852 using "diencephalon morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000171]) [-2] ! parse: GO:0048852 using "diencephalon morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0000101]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of diencephalon are generated and organized. Morphogenesis pertains to the creation of form. The diencephalon is the paired caudal parts of the prosencephalon from which the thalamus, hypothalamus, epithalamus and subthalamus are derived; these regions regulate autonomic, visceral and endocrine function, and process information directed to the cerebral cortex." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of diencephalon [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0000101])] [Term] id: GO:0048852 ! diencephalon morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0000101 ! diencephalon ! seconds spent parsing GO:0048852: 6.25 ! parse: GO:0048853 using "forebrain morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000170]) [-2] ! parse: GO:0048853 using "forebrain morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0000109]) [-2] ! parse: GO:0048853 using "forebrain morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=cell:forebrain]) [-2] ! parse: GO:0048853 using "prosencephalon morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000170]) [-2] ! parse: GO:0048853 using "prosencephalon morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0000109]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of the forebrain are generated and organized. Morphogenesis pertains to the creation of form. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions)." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of forebrain [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=cell:forebrain])] [Term] id: GO:0048853 ! forebrain morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of cell:forebrain ! forebrain synonym: "forebrain anatomical structure morphogenesis" EXACT [OBOL:automatic] ! seconds spent parsing GO:0048853: 14.47 ! parse: GO:0048854 using "brain morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=FBbt:00005095]) [-2] ! parse: GO:0048854 using "brain morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000168]) [-2] ! parse: GO:0048854 using "brain morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0000008]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of brain are generated and organized. Morphogenesis pertains to the creation of form. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.)." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of brain [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0000008])] [Term] id: GO:0048854 ! brain morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0000008 ! brain ! seconds spent parsing GO:0048854: 7.3 ! parse: GO:0048855 using "adenohypophysis morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000177]) [-2] ! parse: GO:0048855 using "adenohypophysis morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0001282]) [-2] ! parse: GO:0048855 using "adenophysis morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(adenophysis, anatomy)]) [-12] ! parse: GO:0048855 using "anterior pituitary gland morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(gland, anatomy), OBO_REL:unfolds_in=ZFA:0001282]) [-7] ! parse: GO:0048855 using "anterior pituitary gland morphogenesis" => cdef(GO:0022612, [OBO_REL:results_in_developmental_progression_of=ZFA:0001282]) [-2] ! parse: GO:0048855 using "anterior pituitary morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0001282]) [-2] ! no existing xp def ! def: "The process by which the anatomical structures of the adenohypophysis are generated and organized. Morphogenesis pertains to the creation of form. The adenohypophysis is the anterior part of the pituitary. It secretes a variety of hormones and its function is regulated by the hypothalamus." ! PROPOSED: gland morphogenesis that OBO_REL:results_in_developmental_progression_of adenohypophysis [cdef(GO:0022612, [OBO_REL:results_in_developmental_progression_of=ZFA:0001282])] [Term] id: GO:0048855 ! adenohypophysis morphogenesis intersection_of: GO:0022612 ! gland morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0001282 ! adenohypophysis ! seconds spent parsing GO:0048855: 21.72 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0048856 using "anatomical structure development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000037]) [-2] ! no existing xp def ! def: "The biological process whose specific outcome is the progression of an anatomical structure from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure, whatever form that may be including its natural destruction. An anatomical structure is any biological entity that occupies space and is distinguished from its surroundings. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome." ! PROPOSED: developmental process that results_in_complete_developmental_of anatomical structure [cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000037])] [Term] id: GO:0048856 ! anatomical structure development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of ZFA:0000037 ! anatomical structure ! seconds spent parsing GO:0048856: 9.57 ! parse: GO:0048858 using "cell projection morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=GO:0042995]) [-2] ! parse: GO:0048858 using "cell projection morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(projection, anatomy), OBO_REL:unfolds_in=CL:0000000]) [-12] ! parse: GO:0048858 using "cell projection morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(projection, anatomy), OBO_REL:unfolds_in=ZFA:0009000]) [-12] ! no existing xp def ! def: "The process by which the anatomical structures of a cell projection are generated and organized. Morphogenesis pertains to the creation of form." ! PROPOSED: anatomical structure morphogenesis that OBO_REL:results_in_developmental_progression_of cell projection [cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=GO:0042995])] [Term] id: GO:0048858 ! cell projection morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of GO:0042995 ! cell projection synonym: "cell projection anatomical structure morphogenesis" EXACT [OBOL:automatic] ! seconds spent parsing GO:0048858: 13.03 ! Already have xp for: GO:0048860 glioblast cell division ! CURRENT : cell division that OBO_REL:results_in_division_of glioblast [cdef(GO:0051301, [OBO_REL:results_in_division_of=CL:0000030])] ! No parse for: GO:0048861 leukemia inhibitory factor signaling pathway ! Already have xp for: GO:0048863 stem cell differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of stem cell [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000034])] ! Already have xp for: GO:0048864 stem cell development ! CURRENT : developmental process that OBO_REL:results_in_developmental_progression_of stem cell [cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=CL:0000034])] ! Already have xp for: GO:0048865 stem cell fate commitment ! CURRENT : cell fate commitment that OBO_REL:results_in_commitment_to stem cell [cdef(GO:0045165, [OBO_REL:results_in_commitment_to=CL:0000034])] ! Already have xp for: GO:0048866 stem cell fate specification ! CURRENT : cell fate specification that OBO_REL:results_in_specification_of stem cell [cdef(GO:0001708, [OBO_REL:results_in_specification_of=CL:0000034])] ! Already have xp for: GO:0048867 stem cell fate determination ! CURRENT : cell fate determination that OBO_REL:results_in_determination_to stem cell [cdef(GO:0001709, [OBO_REL:results_in_determination_to=CL:0000034])] ! Already have xp for: GO:0048868 pollen tube development ! CURRENT : tube development that OBO_REL:results_in_developmental_progression_of pollen [cdef(GO:0035295, [OBO_REL:results_in_developmental_progression_of=cell:pollen])] ! Already have xp for: GO:0048869 cellular developmental process ! CURRENT : developmental process that OBO_REL:part_of cellularization [cdef(GO:0032502, [OBO_REL:part_of=GO:0007349])] ! Already have xp for: GO:0048870 cell motility involved in cell locomotion ! CURRENT : cell motility that OBO_REL:part_of cell motility [cdef(GO:0006928, [OBO_REL:part_of=GO:0006928])] ! No parse for: GO:0048871 multicellular organismal homeostasis ! No parse for: GO:0048872 homeostasis of number of cells ! No relation defined: results_in_complete_developmental_of ! parse: GO:0048880 using "sensory system development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000282]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of a sensory system over time from its formation to the mature structure." ! PROPOSED: developmental process that results_in_complete_developmental_of sensory system [cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000282])] [Term] id: GO:0048880 ! sensory system development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of ZFA:0000282 ! sensory system synonym: "sensory systems development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0048880: 4.82 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0048882 using "LL development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00000546]) [-2] ! parse: GO:0048882 using "LL development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00000581]) [-2] ! parse: GO:0048882 using "LL development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00000648]) [-2] ! parse: GO:0048882 using "LL development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00000709]) [-2] ! parse: GO:0048882 using "LL development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00000754]) [-2] ! parse: GO:0048882 using "LL development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00000799]) [-2] ! parse: GO:0048882 using "LL development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00000844]) [-2] ! parse: GO:0048882 using "LL development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00000889]) [-2] ! parse: GO:0048882 using "LL development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00000934]) [-2] ! parse: GO:0048882 using "lateral line development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0001469]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the lateral line over time, from its formation to the mature structure. The lateral line consists of small sensory patches (neuromasts) located superficially on the skin or just under the skin in fluid-filled canals on the head and body of all fishes and most amphibians. The lateral line develops from cranial ectodermal placodes situated behind the ear and between the eye and ear." ! PROPOSED: developmental process that results_in_complete_developmental_of lateral line [cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0001469])] [Term] id: GO:0048882 ! lateral line development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of ZFA:0001469 ! lateral line ! seconds spent parsing GO:0048882: 15.18 ! No parse for: GO:0048883 neuromast primordium migration ! No relation defined: results_in_complete_developmental_of ! parse: GO:0048884 using "neuromast development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000243]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the neuromast over time, from its formation to the mature structure. The neuromast is the sensory organ of the lateral line and is composed of a population of sensory hair cells, and nonsensory supporting cells and mantle cells. Neuromasts are located superficially on the epithelium or in lateral line canals." ! PROPOSED: developmental process that results_in_complete_developmental_of neuromast [cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000243])] [Term] id: GO:0048884 ! neuromast development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of ZFA:0000243 ! neuromast synonym: "lateral line neuromast development" EXACT [OBOL:automatic] synonym: "neuromasts development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0048884: 4.91 ! No parse for: GO:0048885 neuromast deposition ! Already have xp for: GO:0048886 neuromast hair cell differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of neuromast hair cell [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000856])] ! Already have xp for: GO:0048888 neuromast mantle cell differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of neuromast mantle cell [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000851])] ! Already have xp for: GO:0048889 neuromast support cell differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of neuromast support cell [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000852])] ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0048890 using "gLL ganglion development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(gLL ganglion, anatomy)]) [-13] ! parse: GO:0048890 using "lateral line ganglion development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=FBbt:00005137, OBO_REL:unfolds_in=ZFA:0001469]) [-3] ! parse: GO:0048890 using "lateral line ganglion development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=MA:0002406, OBO_REL:unfolds_in=ZFA:0001469]) [-3] ! parse: GO:0048890 using "lateral line ganglion development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=ZFA:0000190, OBO_REL:unfolds_in=ZFA:0001469]) [-3] ! parse: GO:0048890 using "lateral line ganglion development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00005137, OBO_REL:unfolds_in=ZFA:0001469]) [-3] ! parse: GO:0048890 using "lateral line ganglion development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0002406, OBO_REL:unfolds_in=ZFA:0001469]) [-3] ! parse: GO:0048890 using "lateral line ganglion development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000120]) [-2] ! parse: GO:0048890 using "lateral line ganglion development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000190, OBO_REL:unfolds_in=ZFA:0001469]) [-3] ! parse: GO:0048890 using "lateral line ganglion development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(FBbt:00005137, [OBO_REL:part_of=ZFA:0001469])]) [-3] ! parse: GO:0048890 using "lateral line ganglion development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(MA:0002406, [OBO_REL:part_of=ZFA:0001469])]) [-3] ! parse: GO:0048890 using "lateral line ganglion development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(ZFA:0000190, [OBO_REL:part_of=ZFA:0001469])]) [-3] ! no existing xp def ! def: "The process whose specific outcome is the progression of the lateral line ganglion over time, from its formation to the mature structure. The lateral line ganglion develops from cranial ectodermal placodes situated between the eye and ear and behind the ear." ! PROPOSED: developmental process that results_in_complete_developmental_of lateral line ganglion [cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000120])] [Term] id: GO:0048890 ! lateral line ganglion development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of ZFA:0000120 ! lateral line ganglion synonym: "lateral line ganglia development" EXACT [OBOL:automatic] synonym: "llg development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0048890: 18.84 ! parse: GO:0048891 using "gLL neuron differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(gLL neuron, cell)]) [-11] ! parse: GO:0048891 using "gLL neuron differentiation" => cdef(GO:0030182, [OBO_REL:results_in_acquisition_of_features_of=anon(gLL, cell)]) [-4] ! parse: GO:0048891 using "gLL neuron differentiation" => cdef(GO:0030182, [OBO_REL:results_in_developmental_progression_of=anon(gLL, anatomy)]) [-4] ! parse: GO:0048891 using "lateral line ganglion neuron differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000540, OBO_REL:unfolds_in=ZFA:0000120]) [-3] ! parse: GO:0048891 using "lateral line ganglion neuron differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000540, OBO_REL:unfolds_in=cdef(FBbt:00005137, [OBO_REL:part_of=ZFA:0001469])]) [-4] ! parse: GO:0048891 using "lateral line ganglion neuron differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000540, OBO_REL:unfolds_in=cdef(MA:0002406, [OBO_REL:part_of=ZFA:0001469])]) [-4] ! parse: GO:0048891 using "lateral line ganglion neuron differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000540, OBO_REL:unfolds_in=cdef(ZFA:0000190, [OBO_REL:part_of=ZFA:0001469])]) [-4] ! parse: GO:0048891 using "lateral line ganglion neuron differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(ganglion neuron, cell), OBO_REL:unfolds_in=ZFA:0001469]) [-17] ! parse: GO:0048891 using "lateral line ganglion neuron differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(lateral line ganglion neuron, cell)]) [-29] ! parse: GO:0048891 using "lateral line ganglion neuron differentiation" => cdef(GO:0030154, [and=results_in_acquisition_of_features_of(CL:0000540)/unfolds_in(FBbt:00005137), OBO_REL:unfolds_in=ZFA:0001469]) [-3] ! parse: GO:0048891 using "lateral line ganglion neuron differentiation" => cdef(GO:0030154, [and=results_in_acquisition_of_features_of(CL:0000540)/unfolds_in(MA:0002406), OBO_REL:unfolds_in=ZFA:0001469]) [-3] ! parse: GO:0048891 using "lateral line ganglion neuron differentiation" => cdef(GO:0030154, [and=results_in_acquisition_of_features_of(CL:0000540)/unfolds_in(ZFA:0000190), OBO_REL:unfolds_in=ZFA:0001469]) [-3] ! parse: GO:0048891 using "lateral line ganglion neuron differentiation" => cdef(GO:0030182, [OBO_REL:results_in_acquisition_of_features_of=anon(ganglion, cell), OBO_REL:unfolds_in=ZFA:0001469]) [-10] ! parse: GO:0048891 using "lateral line ganglion neuron differentiation" => cdef(GO:0030182, [OBO_REL:results_in_acquisition_of_features_of=anon(lateral line ganglion, cell)]) [-22] ! parse: GO:0048891 using "lateral line ganglion neuron differentiation" => cdef(GO:0030182, [OBO_REL:results_in_developmental_progression_of=FBbt:00005137, OBO_REL:unfolds_in=ZFA:0001469]) [-3] ! parse: GO:0048891 using "lateral line ganglion neuron differentiation" => cdef(GO:0030182, [OBO_REL:results_in_developmental_progression_of=MA:0002406, OBO_REL:unfolds_in=ZFA:0001469]) [-3] ! parse: GO:0048891 using "lateral line ganglion neuron differentiation" => cdef(GO:0030182, [OBO_REL:results_in_developmental_progression_of=ZFA:0000120]) [-2] ! parse: GO:0048891 using "lateral line ganglion neuron differentiation" => cdef(GO:0030182, [OBO_REL:results_in_developmental_progression_of=ZFA:0000190, OBO_REL:unfolds_in=ZFA:0001469]) [-3] ! parse: GO:0048891 using "lateral line ganglion neuron differentiation" => cdef(GO:0030182, [OBO_REL:results_in_developmental_progression_of=cdef(FBbt:00005137, [OBO_REL:part_of=ZFA:0001469])]) [-3] ! parse: GO:0048891 using "lateral line ganglion neuron differentiation" => cdef(GO:0030182, [OBO_REL:results_in_developmental_progression_of=cdef(MA:0002406, [OBO_REL:part_of=ZFA:0001469])]) [-3] ! parse: GO:0048891 using "lateral line ganglion neuron differentiation" => cdef(GO:0030182, [OBO_REL:results_in_developmental_progression_of=cdef(ZFA:0000190, [OBO_REL:part_of=ZFA:0001469])]) [-3] ! no existing xp def ! def: "The process whereby a relatively unspecialized cell acquires specialized features of a lateral line ganglion neuron." ! PROPOSED: neuron differentiation that OBO_REL:results_in_developmental_progression_of lateral line ganglion [cdef(GO:0030182, [OBO_REL:results_in_developmental_progression_of=ZFA:0000120])] [Term] id: GO:0048891 ! lateral line ganglion neuron differentiation intersection_of: GO:0030182 ! neuron differentiation intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0000120 ! lateral line ganglion synonym: "lateral line ganglia nerve cell cell differentiation" EXACT [OBOL:automatic] synonym: "lateral line ganglia nerve cell differentiation" EXACT [OBOL:automatic] synonym: "lateral line ganglia neuron cell differentiation" EXACT [OBOL:automatic] synonym: "lateral line ganglia neuron differentiation" EXACT [OBOL:automatic] synonym: "llg nerve cell cell differentiation" EXACT [OBOL:automatic] synonym: "llg nerve cell differentiation" EXACT [OBOL:automatic] synonym: "llg neuron cell differentiation" EXACT [OBOL:automatic] synonym: "llg neuron differentiation" EXACT [OBOL:automatic] ! seconds spent parsing GO:0048891: 39.54 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0048892 using "lateral line nerve development" => cdef(GO:0021675, [OBO_REL:results_in_developmental_progression_of=ZFA:0001469]) [-2] ! parse: GO:0048892 using "lateral line nerve development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=FBbt:00005105, OBO_REL:unfolds_in=ZFA:0001469]) [-3] ! parse: GO:0048892 using "lateral line nerve development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=MA:0000217, OBO_REL:unfolds_in=ZFA:0001469]) [-3] ! parse: GO:0048892 using "lateral line nerve development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00005105, OBO_REL:unfolds_in=ZFA:0001469]) [-3] ! parse: GO:0048892 using "lateral line nerve development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000217, OBO_REL:unfolds_in=ZFA:0001469]) [-3] ! parse: GO:0048892 using "lateral line nerve development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0001479]) [-2] ! parse: GO:0048892 using "lateral line nerve development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(FBbt:00005105, [OBO_REL:part_of=ZFA:0001469])]) [-3] ! parse: GO:0048892 using "lateral line nerve development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(MA:0000217, [OBO_REL:part_of=ZFA:0001469])]) [-3] ! parse: GO:0048892 using "nLL development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(nLL, anatomy)]) [-4] ! no existing xp def ! def: "The process whose specific outcome is the progression of the lateral line nerve over time, form its formation to the mature structure. Lateral line nerves project primarily to an octavolateralis column in the hindbrain that consists of the medial octavolateralis nucleus (MON), the caudal octavolateralis nucleus, and the magnocellular nucleus." ! PROPOSED: developmental process that results_in_complete_developmental_of lateral line nerve [cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0001479])] [Term] id: GO:0048892 ! lateral line nerve development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of ZFA:0001479 ! lateral line nerve ! seconds spent parsing GO:0048892: 12.33 ! parse: GO:0048895 using "lateral line nerve glial cell differentiation" => cdef(GO:0010001, [OBO_REL:results_in_acquisition_of_features_of=anon(lateral line nerve, cell)]) [-19] ! parse: GO:0048895 using "lateral line nerve glial cell differentiation" => cdef(GO:0010001, [OBO_REL:results_in_acquisition_of_features_of=anon(nerve, cell), OBO_REL:unfolds_in=ZFA:0001469]) [-7] ! parse: GO:0048895 using "lateral line nerve glial cell differentiation" => cdef(GO:0010001, [OBO_REL:results_in_developmental_progression_of=FBbt:00005105, OBO_REL:unfolds_in=ZFA:0001469]) [-3] ! parse: GO:0048895 using "lateral line nerve glial cell differentiation" => cdef(GO:0010001, [OBO_REL:results_in_developmental_progression_of=MA:0000217, OBO_REL:unfolds_in=ZFA:0001469]) [-3] ! parse: GO:0048895 using "lateral line nerve glial cell differentiation" => cdef(GO:0010001, [OBO_REL:results_in_developmental_progression_of=ZFA:0001479]) [-2] ! parse: GO:0048895 using "lateral line nerve glial cell differentiation" => cdef(GO:0010001, [OBO_REL:results_in_developmental_progression_of=cdef(FBbt:00005105, [OBO_REL:part_of=ZFA:0001469])]) [-3] ! parse: GO:0048895 using "lateral line nerve glial cell differentiation" => cdef(GO:0010001, [OBO_REL:results_in_developmental_progression_of=cdef(MA:0000217, [OBO_REL:part_of=ZFA:0001469])]) [-3] ! parse: GO:0048895 using "lateral line nerve glial cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000125, OBO_REL:unfolds_in=ZFA:0001479]) [-3] ! parse: GO:0048895 using "lateral line nerve glial cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000125, OBO_REL:unfolds_in=cdef(FBbt:00005105, [OBO_REL:part_of=ZFA:0001469])]) [-4] ! parse: GO:0048895 using "lateral line nerve glial cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000125, OBO_REL:unfolds_in=cdef(MA:0000217, [OBO_REL:part_of=ZFA:0001469])]) [-4] ! parse: GO:0048895 using "lateral line nerve glial cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(lateral line nerve glial, cell)]) [-25] ! parse: GO:0048895 using "lateral line nerve glial cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(lateral line nerve glial cell, cell)]) [-30] ! parse: GO:0048895 using "lateral line nerve glial cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(nerve glial, cell), OBO_REL:unfolds_in=ZFA:0001469]) [-13] ! parse: GO:0048895 using "lateral line nerve glial cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(nerve glial cell, cell), OBO_REL:unfolds_in=ZFA:0001469]) [-18] ! parse: GO:0048895 using "lateral line nerve glial cell differentiation" => cdef(GO:0030154, [and=results_in_acquisition_of_features_of(CL:0000125)/unfolds_in(FBbt:00005105), OBO_REL:unfolds_in=ZFA:0001469]) [-3] ! parse: GO:0048895 using "lateral line nerve glial cell differentiation" => cdef(GO:0030154, [and=results_in_acquisition_of_features_of(CL:0000125)/unfolds_in(MA:0000217), OBO_REL:unfolds_in=ZFA:0001469]) [-3] ! no existing xp def ! def: "The process whereby a relatively unspecialized cell acquires specialized features of a glial cell in a lateral line nerve." ! PROPOSED: glial cell differentiation that OBO_REL:results_in_developmental_progression_of lateral line nerve [cdef(GO:0010001, [OBO_REL:results_in_developmental_progression_of=ZFA:0001479])] [Term] id: GO:0048895 ! lateral line nerve glial cell differentiation intersection_of: GO:0010001 ! glial cell differentiation intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0001479 ! lateral line nerve ! seconds spent parsing GO:0048895: 34.35 ! Already have xp for: GO:0048896 glial cell migration in a lateral line nerve ! CURRENT : glial cell migration that OBO_REL:unfolds_in a lateral line nerve [cdef(GO:0008347, [OBO_REL:unfolds_in=cell:a_lateral_line_nerve])] ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0048898 using "ALL system development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(ALL system, anatomy)]) [-11] ! parse: GO:0048898 using "ALL system development" => cdef(GO:0048731, [OBO_REL:results_in_developmental_progression_of=anon(ALL, anatomy)]) [-4] ! parse: GO:0048898 using "anterior lateral line system development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0001468]) [-2] ! parse: GO:0048898 using "anterior lateral line system development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(system, anatomy), OBO_REL:unfolds_in=ZFA:0001470]) [-8] ! parse: GO:0048898 using "anterior lateral line system development" => cdef(GO:0048731, [OBO_REL:results_in_developmental_progression_of=ZFA:0001470]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the anterior lateral line system over time, from its formation to the mature structure. The anterior lateral line system develops from cranial ectodermal placodes, situated between the eye and the ear, that give rise to both the neuromasts and the anterior lateral line sensory nerves that innervate the neuromasts. The anterior lateral line system consists of small sensory patches (neuromasts) located superficially on the skin or just under the skin in fluid-filled canals on the head of all fishes and most amphibians and are innervated by several lateral line nerves, which project to the hindbrain. The anterior lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance." ! PROPOSED: system development that OBO_REL:results_in_developmental_progression_of anterior lateral line [cdef(GO:0048731, [OBO_REL:results_in_developmental_progression_of=ZFA:0001470])] [Term] id: GO:0048898 ! anterior lateral line system development intersection_of: GO:0048731 ! system development intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0001470 ! anterior lateral line ! seconds spent parsing GO:0048898: 10.67 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0048899 using "anterior LL development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(anterior LL, anatomy)]) [-12] ! parse: GO:0048899 using "anterior LL development" => cdef(GO:0048882, [OBO_REL:results_in_developmental_progression_of=anon(anterior, anatomy)]) [-9] ! parse: GO:0048899 using "anterior lateral line development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0001470]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the anterior lateral line over time, from its formation to the mature structure. The anterior lateral line consists of small sensory patches (neuromasts) located superficially on the skin or just under the skin in fluid-filled canals on the head of all fishes and most amphibians. The anterior lateral line develops from cranial ectodermal placodes situated between the eye and ear." ! PROPOSED: developmental process that results_in_complete_developmental_of anterior lateral line [cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0001470])] [Term] id: GO:0048899 ! anterior lateral line development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of ZFA:0001470 ! anterior lateral line ! seconds spent parsing GO:0048899: 10.67 ! No parse for: GO:0048900 anterior lateral line neuromast primordium migration ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0048901 using "anterior lateral line neuromast development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=ZFA:0000243, OBO_REL:unfolds_in=ZFA:0001470]) [-3] ! parse: GO:0048901 using "anterior lateral line neuromast development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000243, OBO_REL:unfolds_in=ZFA:0001470]) [-3] ! parse: GO:0048901 using "anterior lateral line neuromast development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(ZFA:0000243, [OBO_REL:part_of=ZFA:0001470])]) [-3] ! parse: GO:0048901 using "anterior lateral line neuromast development" => cdef(GO:0048884, [OBO_REL:results_in_developmental_progression_of=ZFA:0001470]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the anterior lateral line neuromast over time, from its formation to the mature structure. The neuromast is the sensory receptor of the anterior lateral line system and is composed of a population of sensory hair cells, and nonsensory supporting cells and mantle cells. Neuromast are located superficially on the epithelium or in lateral line canals." ! PROPOSED: neuromast development that OBO_REL:results_in_developmental_progression_of anterior lateral line [cdef(GO:0048884, [OBO_REL:results_in_developmental_progression_of=ZFA:0001470])] [Term] id: GO:0048901 ! anterior lateral line neuromast development intersection_of: GO:0048884 ! neuromast development intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0001470 ! anterior lateral line ! seconds spent parsing GO:0048901: 6.68 ! No parse for: GO:0048902 anterior lateral line neuromast deposition ! parse: GO:0048903 using "anterior lateral line neuromast hair cell differentiation" => cdef(GO:0010054, [OBO_REL:results_in_acquisition_of_features_of=anon(anterior lateral line neuromast, cell)]) [-32] ! parse: GO:0048903 using "anterior lateral line neuromast hair cell differentiation" => cdef(GO:0010054, [OBO_REL:results_in_developmental_progression_of=ZFA:0000243, OBO_REL:unfolds_in=ZFA:0001470]) [-3] ! parse: GO:0048903 using "anterior lateral line neuromast hair cell differentiation" => cdef(GO:0010054, [OBO_REL:results_in_developmental_progression_of=cdef(ZFA:0000243, [OBO_REL:part_of=ZFA:0001470])]) [-3] ! parse: GO:0048903 using "anterior lateral line neuromast hair cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000000, OBO_REL:unfolds_in=cdef(cdef(FBbt:00005182, [OBO_REL:part_of=ZFA:0000243]), [OBO_REL:part_of=ZFA:0001470])]) [-5] ! parse: GO:0048903 using "anterior lateral line neuromast hair cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000299, OBO_REL:unfolds_in=cdef(ZFA:0000243, [OBO_REL:part_of=ZFA:0001470])]) [-4] ! parse: GO:0048903 using "anterior lateral line neuromast hair cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000374, OBO_REL:unfolds_in=cdef(ZFA:0000243, [OBO_REL:part_of=ZFA:0001470])]) [-4] ! parse: GO:0048903 using "anterior lateral line neuromast hair cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000855, OBO_REL:unfolds_in=cdef(ZFA:0000243, [OBO_REL:part_of=ZFA:0001470])]) [-4] ! parse: GO:0048903 using "anterior lateral line neuromast hair cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000856, OBO_REL:unfolds_in=ZFA:0001470]) [-3] ! parse: GO:0048903 using "anterior lateral line neuromast hair cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(anterior lateral line neuromast hair, cell)]) [-37] ! parse: GO:0048903 using "anterior lateral line neuromast hair cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(anterior lateral line neuromast hair cell, cell)]) [-42] ! parse: GO:0048903 using "anterior lateral line neuromast hair cell differentiation" => cdef(GO:0030154, [and=results_in_acquisition_of_features_of(CL:0000000)/unfolds_in(FBbt:00005182), OBO_REL:unfolds_in=cdef(ZFA:0000243, [OBO_REL:part_of=ZFA:0001470])]) [-4] ! parse: GO:0048903 using "anterior lateral line neuromast hair cell differentiation" => cdef(GO:0030154, [and=results_in_acquisition_of_features_of(CL:0000000)/unfolds_in(that(FBbt:00005182, part_of(ZFA:0000243))), OBO_REL:unfolds_in=ZFA:0001470]) [-3] ! parse: GO:0048903 using "anterior lateral line neuromast hair cell differentiation" => cdef(GO:0030154, [and=results_in_acquisition_of_features_of(CL:0000299)/unfolds_in(ZFA:0000243), OBO_REL:unfolds_in=ZFA:0001470]) [-3] ! parse: GO:0048903 using "anterior lateral line neuromast hair cell differentiation" => cdef(GO:0030154, [and=results_in_acquisition_of_features_of(CL:0000374)/unfolds_in(ZFA:0000243), OBO_REL:unfolds_in=ZFA:0001470]) [-3] ! parse: GO:0048903 using "anterior lateral line neuromast hair cell differentiation" => cdef(GO:0030154, [and=results_in_acquisition_of_features_of(CL:0000855)/unfolds_in(ZFA:0000243), OBO_REL:unfolds_in=ZFA:0001470]) [-3] ! parse: GO:0048903 using "anterior lateral line neuromast hair cell differentiation" => cdef(GO:0030154, [and=and(results_in_acquisition_of_features_of(CL:0000000), unfolds_in(FBbt:00005182))/unfolds_in(ZFA:0000243), OBO_REL:unfolds_in=ZFA:0001470]) [-3] ! parse: GO:0048903 using "anterior lateral line neuromast hair cell differentiation" => cdef(GO:0035315, [OBO_REL:results_in_acquisition_of_features_of=anon(anterior lateral line neuromast, cell)]) [-32] ! parse: GO:0048903 using "anterior lateral line neuromast hair cell differentiation" => cdef(GO:0035315, [OBO_REL:results_in_developmental_progression_of=ZFA:0000243, OBO_REL:unfolds_in=ZFA:0001470]) [-3] ! parse: GO:0048903 using "anterior lateral line neuromast hair cell differentiation" => cdef(GO:0035315, [OBO_REL:results_in_developmental_progression_of=cdef(ZFA:0000243, [OBO_REL:part_of=ZFA:0001470])]) [-3] ! parse: GO:0048903 using "anterior lateral line neuromast hair cell differentiation" => cdef(GO:0048886, [OBO_REL:results_in_acquisition_of_features_of=anon(anterior lateral line, cell)]) [-22] ! parse: GO:0048903 using "anterior lateral line neuromast hair cell differentiation" => cdef(GO:0048886, [OBO_REL:results_in_developmental_progression_of=ZFA:0001470]) [-2] ! no existing xp def ! def: "The process whereby a relatively unspecialized cell acquires specialized features of a neuromast hair cell. Neuromast hair cells are the sensory receptors of the neuromast and are located in a portion of the neuromast called the sensory strip. Each hair cell of the neuromast is morphologically polarized as a result of the relative position of the single kinocilium and the clusters of stereocilia on its apical surface. There are approximately seven hair cells within each neuromast, with each hair cell innervated by afferent and efferent neurons." ! PROPOSED: neuromast hair cell differentiation that OBO_REL:results_in_developmental_progression_of anterior lateral line [cdef(GO:0048886, [OBO_REL:results_in_developmental_progression_of=ZFA:0001470])] [Term] id: GO:0048903 ! anterior lateral line neuromast hair cell differentiation intersection_of: GO:0048886 ! neuromast hair cell differentiation intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0001470 ! anterior lateral line ! seconds spent parsing GO:0048903: 32.53 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0048904 using "anterior lateral line neuromast cupula development" => cdef(GO:0032502, [and=results_in_complete_developmental_of(anon(cupula, anatomy))/unfolds_in(ZFA:0000243), OBO_REL:unfolds_in=ZFA:0001470]) [-3] ! parse: GO:0048904 using "anterior lateral line neuromast cupula development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(cupula, anatomy), OBO_REL:unfolds_in=cdef(ZFA:0000243, [OBO_REL:part_of=ZFA:0001470])]) [-9] ! parse: GO:0048904 using "anterior lateral line neuromast cupula development" => cdef(GO:0048887, [OBO_REL:results_in_developmental_progression_of=ZFA:0000243, OBO_REL:unfolds_in=ZFA:0001470]) [-3] ! parse: GO:0048904 using "anterior lateral line neuromast cupula development" => cdef(GO:0048887, [OBO_REL:results_in_developmental_progression_of=cdef(ZFA:0000243, [OBO_REL:part_of=ZFA:0001470])]) [-3] ! no existing xp def ! def: "The process whose specific outcome is the progression of the anterior lateral line neuromast cupula over time, from its formation to the mature structure. The cupula is secreted by mantle cells and the ciliary bundles of all of the hair cells of the neuromast are embedded in it. The cupula provides a mechanical linkage between the hair cells and the external hydrodynamic environment. The cupula of superficial neuromasts grows continuously, while the height of the cupula of canal neuromasts is limited by canal diameter." ! PROPOSED: cupula development that OBO_REL:results_in_developmental_progression_of cdef(ZFA:0000243, [OBO_REL:part_of=ZFA:0001470]) [cdef(GO:0048887, [OBO_REL:results_in_developmental_progression_of=cdef(ZFA:0000243, [OBO_REL:part_of=ZFA:0001470])])] [Term] id: GO:0048904 ! anterior lateral line neuromast cupula development intersection_of: GO:0048887 ! cupula development intersection_of: OBO_REL:results_in_developmental_progression_of anterior_lateral_line_lateral_line_neuromast ! seconds spent parsing GO:0048904: 15.87 ! parse: GO:0048905 using "anterior lateral line neuromast mantle cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000851, OBO_REL:unfolds_in=ZFA:0001470]) [-3] ! parse: GO:0048905 using "anterior lateral line neuromast mantle cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(anterior lateral line neuromast mantle, cell)]) [-39] ! parse: GO:0048905 using "anterior lateral line neuromast mantle cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(anterior lateral line neuromast mantle cell, cell)]) [-44] ! parse: GO:0048905 using "anterior lateral line neuromast mantle cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(mantle, cell), OBO_REL:unfolds_in=cdef(ZFA:0000243, [OBO_REL:part_of=ZFA:0001470])]) [-9] ! parse: GO:0048905 using "anterior lateral line neuromast mantle cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(mantle cell, cell), OBO_REL:unfolds_in=cdef(ZFA:0000243, [OBO_REL:part_of=ZFA:0001470])]) [-14] ! parse: GO:0048905 using "anterior lateral line neuromast mantle cell differentiation" => cdef(GO:0030154, [and=results_in_acquisition_of_features_of(anon(mantle, cell))/unfolds_in(ZFA:0000243), OBO_REL:unfolds_in=ZFA:0001470]) [-3] ! parse: GO:0048905 using "anterior lateral line neuromast mantle cell differentiation" => cdef(GO:0030154, [and=results_in_acquisition_of_features_of(anon(mantle cell, cell))/unfolds_in(ZFA:0000243), OBO_REL:unfolds_in=ZFA:0001470]) [-3] ! parse: GO:0048905 using "anterior lateral line neuromast mantle cell differentiation" => cdef(GO:0048888, [OBO_REL:results_in_acquisition_of_features_of=anon(anterior lateral line, cell)]) [-22] ! parse: GO:0048905 using "anterior lateral line neuromast mantle cell differentiation" => cdef(GO:0048888, [OBO_REL:results_in_developmental_progression_of=ZFA:0001470]) [-2] ! no existing xp def ! def: "The process whereby a relatively unspecialized cell acquires specialized features of a neuromast mantle cell. Mantle cells are non-sensory cells that surround the sensory strip, separating the neuromast from the epidermis. Mantle cells secrete the cupula in which the ciliary bundles of all of the hair cells are embedded." ! PROPOSED: neuromast mantle cell differentiation that OBO_REL:results_in_developmental_progression_of anterior lateral line [cdef(GO:0048888, [OBO_REL:results_in_developmental_progression_of=ZFA:0001470])] [Term] id: GO:0048905 ! anterior lateral line neuromast mantle cell differentiation intersection_of: GO:0048888 ! neuromast mantle cell differentiation intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0001470 ! anterior lateral line ! seconds spent parsing GO:0048905: 19.8 ! parse: GO:0048906 using "anterior lateral line neuromast support cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000852, OBO_REL:unfolds_in=ZFA:0001470]) [-3] ! parse: GO:0048906 using "anterior lateral line neuromast support cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(anterior lateral line neuromast support, cell)]) [-40] ! parse: GO:0048906 using "anterior lateral line neuromast support cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(anterior lateral line neuromast support cell, cell)]) [-45] ! parse: GO:0048906 using "anterior lateral line neuromast support cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(support, cell), OBO_REL:unfolds_in=cdef(ZFA:0000243, [OBO_REL:part_of=ZFA:0001470])]) [-10] ! parse: GO:0048906 using "anterior lateral line neuromast support cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(support cell, cell), OBO_REL:unfolds_in=cdef(ZFA:0000243, [OBO_REL:part_of=ZFA:0001470])]) [-15] ! parse: GO:0048906 using "anterior lateral line neuromast support cell differentiation" => cdef(GO:0030154, [and=results_in_acquisition_of_features_of(anon(support, cell))/unfolds_in(ZFA:0000243), OBO_REL:unfolds_in=ZFA:0001470]) [-3] ! parse: GO:0048906 using "anterior lateral line neuromast support cell differentiation" => cdef(GO:0030154, [and=results_in_acquisition_of_features_of(anon(support cell, cell))/unfolds_in(ZFA:0000243), OBO_REL:unfolds_in=ZFA:0001470]) [-3] ! parse: GO:0048906 using "anterior lateral line neuromast support cell differentiation" => cdef(GO:0048889, [OBO_REL:results_in_acquisition_of_features_of=anon(anterior lateral line, cell)]) [-22] ! parse: GO:0048906 using "anterior lateral line neuromast support cell differentiation" => cdef(GO:0048889, [OBO_REL:results_in_developmental_progression_of=ZFA:0001470]) [-2] ! no existing xp def ! def: "The process whereby a relatively unspecialized cell acquires specialized features of an anterior lateral line neuromast support cell. Support cells are non-sensory cells of the neuromast that extend between the sensory hair cells from the basement membrane to the apical surface; they are surrounded by mantle cells." ! PROPOSED: neuromast support cell differentiation that OBO_REL:results_in_developmental_progression_of anterior lateral line [cdef(GO:0048889, [OBO_REL:results_in_developmental_progression_of=ZFA:0001470])] [Term] id: GO:0048906 ! anterior lateral line neuromast support cell differentiation intersection_of: GO:0048889 ! neuromast support cell differentiation intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0001470 ! anterior lateral line ! seconds spent parsing GO:0048906: 21.48 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0048907 using "anterior lateral line ganglion development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=FBbt:00005137, OBO_REL:unfolds_in=ZFA:0001470]) [-3] ! parse: GO:0048907 using "anterior lateral line ganglion development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=MA:0002406, OBO_REL:unfolds_in=ZFA:0001470]) [-3] ! parse: GO:0048907 using "anterior lateral line ganglion development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=ZFA:0000190, OBO_REL:unfolds_in=ZFA:0001470]) [-3] ! parse: GO:0048907 using "anterior lateral line ganglion development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00005137, OBO_REL:unfolds_in=ZFA:0001470]) [-3] ! parse: GO:0048907 using "anterior lateral line ganglion development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0002406, OBO_REL:unfolds_in=ZFA:0001470]) [-3] ! parse: GO:0048907 using "anterior lateral line ganglion development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000190, OBO_REL:unfolds_in=ZFA:0001470]) [-3] ! parse: GO:0048907 using "anterior lateral line ganglion development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(FBbt:00005137, [OBO_REL:part_of=ZFA:0001470])]) [-3] ! parse: GO:0048907 using "anterior lateral line ganglion development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(MA:0002406, [OBO_REL:part_of=ZFA:0001470])]) [-3] ! parse: GO:0048907 using "anterior lateral line ganglion development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(ZFA:0000190, [OBO_REL:part_of=ZFA:0001470])]) [-3] ! parse: GO:0048907 using "gALL development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(gALL, anatomy)]) [-5] ! no existing xp def ! def: "The process whose specific outcome is the progression of the anterior lateral line ganglion over time, from its formation to the mature structure. The anterior lateral line ganglion develops from cranial ectodermal placodes situated between the eye and ear." ! PROPOSED: developmental process that results_in_complete_developmental_of cdef(ZFA:0000190, [OBO_REL:part_of=ZFA:0001470]) [cdef(GO:0032502, [results_in_complete_developmental_of=cdef(ZFA:0000190, [OBO_REL:part_of=ZFA:0001470])])] [Term] id: GO:0048907 ! anterior lateral line ganglion development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of anterior_lateral_line_ganglia synonym: "ganglia of anterior lateral line development" EXACT [OBOL:automatic] synonym: "ganglia of the anterior lateral line development" EXACT [OBOL:automatic] synonym: "ganglion of anterior lateral line development" EXACT [OBOL:automatic] synonym: "ganglion of the anterior lateral line development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0048907: 12.21 ! parse: GO:0048908 using "anterior lateral line ganglion neuron differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000540, OBO_REL:unfolds_in=cdef(FBbt:00005137, [OBO_REL:part_of=ZFA:0001470])]) [-4] ! parse: GO:0048908 using "anterior lateral line ganglion neuron differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000540, OBO_REL:unfolds_in=cdef(MA:0002406, [OBO_REL:part_of=ZFA:0001470])]) [-4] ! parse: GO:0048908 using "anterior lateral line ganglion neuron differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000540, OBO_REL:unfolds_in=cdef(ZFA:0000190, [OBO_REL:part_of=ZFA:0001470])]) [-4] ! parse: GO:0048908 using "anterior lateral line ganglion neuron differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(anterior lateral line ganglion neuron, cell)]) [-38] ! parse: GO:0048908 using "anterior lateral line ganglion neuron differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(ganglion neuron, cell), OBO_REL:unfolds_in=ZFA:0001470]) [-17] ! parse: GO:0048908 using "anterior lateral line ganglion neuron differentiation" => cdef(GO:0030154, [and=results_in_acquisition_of_features_of(CL:0000540)/unfolds_in(FBbt:00005137), OBO_REL:unfolds_in=ZFA:0001470]) [-3] ! parse: GO:0048908 using "anterior lateral line ganglion neuron differentiation" => cdef(GO:0030154, [and=results_in_acquisition_of_features_of(CL:0000540)/unfolds_in(MA:0002406), OBO_REL:unfolds_in=ZFA:0001470]) [-3] ! parse: GO:0048908 using "anterior lateral line ganglion neuron differentiation" => cdef(GO:0030154, [and=results_in_acquisition_of_features_of(CL:0000540)/unfolds_in(ZFA:0000190), OBO_REL:unfolds_in=ZFA:0001470]) [-3] ! parse: GO:0048908 using "anterior lateral line ganglion neuron differentiation" => cdef(GO:0030182, [OBO_REL:results_in_acquisition_of_features_of=anon(anterior lateral line ganglion, cell)]) [-31] ! parse: GO:0048908 using "anterior lateral line ganglion neuron differentiation" => cdef(GO:0030182, [OBO_REL:results_in_acquisition_of_features_of=anon(ganglion, cell), OBO_REL:unfolds_in=ZFA:0001470]) [-10] ! parse: GO:0048908 using "anterior lateral line ganglion neuron differentiation" => cdef(GO:0030182, [OBO_REL:results_in_developmental_progression_of=FBbt:00005137, OBO_REL:unfolds_in=ZFA:0001470]) [-3] ! parse: GO:0048908 using "anterior lateral line ganglion neuron differentiation" => cdef(GO:0030182, [OBO_REL:results_in_developmental_progression_of=MA:0002406, OBO_REL:unfolds_in=ZFA:0001470]) [-3] ! parse: GO:0048908 using "anterior lateral line ganglion neuron differentiation" => cdef(GO:0030182, [OBO_REL:results_in_developmental_progression_of=ZFA:0000190, OBO_REL:unfolds_in=ZFA:0001470]) [-3] ! parse: GO:0048908 using "anterior lateral line ganglion neuron differentiation" => cdef(GO:0030182, [OBO_REL:results_in_developmental_progression_of=cdef(FBbt:00005137, [OBO_REL:part_of=ZFA:0001470])]) [-3] ! parse: GO:0048908 using "anterior lateral line ganglion neuron differentiation" => cdef(GO:0030182, [OBO_REL:results_in_developmental_progression_of=cdef(MA:0002406, [OBO_REL:part_of=ZFA:0001470])]) [-3] ! parse: GO:0048908 using "anterior lateral line ganglion neuron differentiation" => cdef(GO:0030182, [OBO_REL:results_in_developmental_progression_of=cdef(ZFA:0000190, [OBO_REL:part_of=ZFA:0001470])]) [-3] ! parse: GO:0048908 using "anterior lateral line ganglion neuron differentiation" => cdef(GO:0048891, [OBO_REL:results_in_acquisition_of_features_of=anon(anterior, cell)]) [-9] ! no existing xp def ! def: "The process whereby a relatively unspecialized cell acquires specialized features of a neuron of the anterior lateral line ganglion." ! PROPOSED: neuron differentiation that OBO_REL:results_in_developmental_progression_of cdef(ZFA:0000190, [OBO_REL:part_of=ZFA:0001470]) [cdef(GO:0030182, [OBO_REL:results_in_developmental_progression_of=cdef(ZFA:0000190, [OBO_REL:part_of=ZFA:0001470])])] [Term] id: GO:0048908 ! anterior lateral line ganglion neuron differentiation intersection_of: GO:0030182 ! neuron differentiation intersection_of: OBO_REL:results_in_developmental_progression_of anterior_lateral_line_ganglia ! seconds spent parsing GO:0048908: 16.95 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0048909 using "anterior lateral line nerve development" => cdef(GO:0021675, [OBO_REL:results_in_developmental_progression_of=ZFA:0001470]) [-2] ! parse: GO:0048909 using "anterior lateral line nerve development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=FBbt:00005105, OBO_REL:unfolds_in=ZFA:0001470]) [-3] ! parse: GO:0048909 using "anterior lateral line nerve development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=MA:0000217, OBO_REL:unfolds_in=ZFA:0001470]) [-3] ! parse: GO:0048909 using "anterior lateral line nerve development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00005105, OBO_REL:unfolds_in=ZFA:0001470]) [-3] ! parse: GO:0048909 using "anterior lateral line nerve development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000217, OBO_REL:unfolds_in=ZFA:0001470]) [-3] ! parse: GO:0048909 using "anterior lateral line nerve development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000425]) [-2] ! parse: GO:0048909 using "anterior lateral line nerve development" => cdef(GO:0032502, [results_in_complete_developmental_of=cell:anterior_lateral_line_nerve]) [-2] ! parse: GO:0048909 using "anterior lateral line nerve development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(FBbt:00005105, [OBO_REL:part_of=ZFA:0001470])]) [-3] ! parse: GO:0048909 using "anterior lateral line nerve development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(MA:0000217, [OBO_REL:part_of=ZFA:0001470])]) [-3] ! parse: GO:0048909 using "nALL development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(nALL, anatomy)]) [-5] ! no existing xp def ! def: "The process whose specific outcome is the progression of the anterior lateral line nerve over time, form its formation to the mature structure. The anterior lateral line nerve contains efferent axons that innervate hair cells of the ALL and afferent axons that project to an octavolateralis column in the hindbrain. The octavolateralis column consists of the medial octavolateralis nucleus (MON), the caudal octavolateralis nucleus, and the magnocellular nucleus." ! PROPOSED: developmental process that results_in_complete_developmental_of anterior lateral line nerve [cdef(GO:0032502, [results_in_complete_developmental_of=cell:anterior_lateral_line_nerve])] [Term] id: GO:0048909 ! anterior lateral line nerve development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of cell:anterior_lateral_line_nerve ! anterior lateral line nerve ! seconds spent parsing GO:0048909: 4.33 ! Already have xp for: GO:0048912 glial cell migration in the anterior lateral line nerve ! CURRENT : glial cell migration that OBO_REL:unfolds_in anterior lateral line nerve and OBO_REL:unfolds_in anterior lateral line nerve [cdef(GO:0008347, [OBO_REL:unfolds_in=cell:anterior_lateral_line_nerve, OBO_REL:unfolds_in=continuant:anterior_lateral_line_nerve])] ! parse: GO:0048913 using "anterior lateral line nerve glial cell differentiation" => cdef(GO:0010001, [OBO_REL:results_in_acquisition_of_features_of=cell:anterior_lateral_line_nerve]) [-2] ! parse: GO:0048913 using "anterior lateral line nerve glial cell differentiation" => cdef(GO:0010001, [OBO_REL:results_in_acquisition_of_features_of=anon(nerve, cell), OBO_REL:unfolds_in=ZFA:0001470]) [-7] ! parse: GO:0048913 using "anterior lateral line nerve glial cell differentiation" => cdef(GO:0010001, [OBO_REL:results_in_developmental_progression_of=FBbt:00005105, OBO_REL:unfolds_in=ZFA:0001470]) [-3] ! parse: GO:0048913 using "anterior lateral line nerve glial cell differentiation" => cdef(GO:0010001, [OBO_REL:results_in_developmental_progression_of=MA:0000217, OBO_REL:unfolds_in=ZFA:0001470]) [-3] ! parse: GO:0048913 using "anterior lateral line nerve glial cell differentiation" => cdef(GO:0010001, [OBO_REL:results_in_developmental_progression_of=ZFA:0000425]) [-2] ! parse: GO:0048913 using "anterior lateral line nerve glial cell differentiation" => cdef(GO:0010001, [OBO_REL:results_in_developmental_progression_of=cell:anterior_lateral_line_nerve]) [-2] ! parse: GO:0048913 using "anterior lateral line nerve glial cell differentiation" => cdef(GO:0010001, [OBO_REL:results_in_developmental_progression_of=cdef(FBbt:00005105, [OBO_REL:part_of=ZFA:0001470])]) [-3] ! parse: GO:0048913 using "anterior lateral line nerve glial cell differentiation" => cdef(GO:0010001, [OBO_REL:results_in_developmental_progression_of=cdef(MA:0000217, [OBO_REL:part_of=ZFA:0001470])]) [-3] ! parse: GO:0048913 using "anterior lateral line nerve glial cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000125, OBO_REL:unfolds_in=ZFA:0000425]) [-3] ! parse: GO:0048913 using "anterior lateral line nerve glial cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000125, OBO_REL:unfolds_in=cell:anterior_lateral_line_nerve]) [-3] ! parse: GO:0048913 using "anterior lateral line nerve glial cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000125, OBO_REL:unfolds_in=cdef(FBbt:00005105, [OBO_REL:part_of=ZFA:0001470])]) [-4] ! parse: GO:0048913 using "anterior lateral line nerve glial cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000125, OBO_REL:unfolds_in=cdef(MA:0000217, [OBO_REL:part_of=ZFA:0001470])]) [-4] ! parse: GO:0048913 using "anterior lateral line nerve glial cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(nerve glial, cell), OBO_REL:unfolds_in=ZFA:0001470]) [-13] ! parse: GO:0048913 using "anterior lateral line nerve glial cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(nerve glial cell, cell), OBO_REL:unfolds_in=ZFA:0001470]) [-18] ! parse: GO:0048913 using "anterior lateral line nerve glial cell differentiation" => cdef(GO:0030154, [and=results_in_acquisition_of_features_of(CL:0000125)/unfolds_in(FBbt:00005105), OBO_REL:unfolds_in=ZFA:0001470]) [-3] ! parse: GO:0048913 using "anterior lateral line nerve glial cell differentiation" => cdef(GO:0030154, [and=results_in_acquisition_of_features_of(CL:0000125)/unfolds_in(MA:0000217), OBO_REL:unfolds_in=ZFA:0001470]) [-3] ! no existing xp def ! def: "The process whereby a relatively unspecialized cell acquires specialized features of a glial cell in the anterior lateral line nerve." ! PROPOSED: glial cell differentiation that OBO_REL:results_in_developmental_progression_of anterior lateral line nerve [cdef(GO:0010001, [OBO_REL:results_in_developmental_progression_of=cell:anterior_lateral_line_nerve])] [Term] id: GO:0048913 ! anterior lateral line nerve glial cell differentiation intersection_of: GO:0010001 ! glial cell differentiation intersection_of: OBO_REL:results_in_developmental_progression_of cell:anterior_lateral_line_nerve ! anterior lateral line nerve synonym: "anterior lateral line nerve glia cell differentiation" EXACT [OBOL:automatic] synonym: "anterior lateral line nerve glial cell cell differentiation" EXACT [OBOL:automatic] synonym: "anterior lateral line nerve neuroglia differentiation" EXACT [OBOL:automatic] synonym: "anterior lateral line nerve neuroglial cell cell differentiation" EXACT [OBOL:automatic] synonym: "anterior lateral line nerve neuroglial cell differentiation" EXACT [OBOL:automatic] ! seconds spent parsing GO:0048913: 21.34 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0048915 using "posterior lateral line system development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0001471]) [-2] ! parse: GO:0048915 using "posterior lateral line system development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(system, anatomy), OBO_REL:unfolds_in=ZFA:0000944]) [-8] ! parse: GO:0048915 using "posterior lateral line system development" => cdef(GO:0048731, [OBO_REL:results_in_developmental_progression_of=ZFA:0000944]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the posterior lateral line system over time, from its formation to the mature structure. The posterior lateral line system develops from cranial ectodermal placodes, situated behind the ear, that give rise to both the neuromasts and the posterior lateral line sensory nerves that innervate the neuromasts. The posterior lateral line system consists of small sensory patches (neuromasts) located superficially on the skin or just under the skin in fluid-filled canals on the head of all fishes and most amphibians. The neuromasts are innervated by several lateral line nerves, which project primarily to the hindbrain. The posterior mechanosensory lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance." ! PROPOSED: system development that OBO_REL:results_in_developmental_progression_of posterior lateral line [cdef(GO:0048731, [OBO_REL:results_in_developmental_progression_of=ZFA:0000944])] [Term] id: GO:0048915 ! posterior lateral line system development intersection_of: GO:0048731 ! system development intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0000944 ! posterior lateral line synonym: "pll system development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0048915: 10.61 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0048916 using "PLL development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(PLL, anatomy)]) [-4] ! parse: GO:0048916 using "posterior lateral line development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000944]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the posterior lateral line over time, from its formation to the mature structure. The posterior lateral line consists of small sensory patches (neuromasts) located superficially on the skin or just under the skin in fluid-filled canals on the body and trunk of all fishes and most amphibians. The posterior lateral line develops from cranial ectodermal placodes situated behind the ear." ! PROPOSED: developmental process that results_in_complete_developmental_of posterior lateral line [cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000944])] [Term] id: GO:0048916 ! posterior lateral line development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of ZFA:0000944 ! posterior lateral line synonym: "pll development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0048916: 9.68 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0048917 using "gPLL development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(gPLL, anatomy)]) [-5] ! parse: GO:0048917 using "posterior lateral line ganglion development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=FBbt:00005137, OBO_REL:unfolds_in=ZFA:0000944]) [-3] ! parse: GO:0048917 using "posterior lateral line ganglion development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=MA:0002406, OBO_REL:unfolds_in=ZFA:0000944]) [-3] ! parse: GO:0048917 using "posterior lateral line ganglion development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=ZFA:0000190, OBO_REL:unfolds_in=ZFA:0000944]) [-3] ! parse: GO:0048917 using "posterior lateral line ganglion development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00005137, OBO_REL:unfolds_in=ZFA:0000944]) [-3] ! parse: GO:0048917 using "posterior lateral line ganglion development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0002406, OBO_REL:unfolds_in=ZFA:0000944]) [-3] ! parse: GO:0048917 using "posterior lateral line ganglion development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000190, OBO_REL:unfolds_in=ZFA:0000944]) [-3] ! parse: GO:0048917 using "posterior lateral line ganglion development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0001314]) [-2] ! parse: GO:0048917 using "posterior lateral line ganglion development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(FBbt:00005137, [OBO_REL:part_of=ZFA:0000944])]) [-3] ! parse: GO:0048917 using "posterior lateral line ganglion development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(MA:0002406, [OBO_REL:part_of=ZFA:0000944])]) [-3] ! parse: GO:0048917 using "posterior lateral line ganglion development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(ZFA:0000190, [OBO_REL:part_of=ZFA:0000944])]) [-3] ! no existing xp def ! def: "The process whose specific outcome is the progression of the posterior lateral line ganglion over time, from its formation to the mature structure. The posterior lateral line ganglion develops from cranial ectodermal placodes situated behind the ear." ! PROPOSED: developmental process that results_in_complete_developmental_of posterior lateral line ganglion [cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0001314])] [Term] id: GO:0048917 ! posterior lateral line ganglion development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of ZFA:0001314 ! posterior lateral line ganglion ! seconds spent parsing GO:0048917: 12.87 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0048918 using "posterior lateral line nerve development" => cdef(GO:0021675, [OBO_REL:results_in_developmental_progression_of=ZFA:0000944]) [-2] ! parse: GO:0048918 using "posterior lateral line nerve development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=FBbt:00005105, OBO_REL:unfolds_in=ZFA:0000944]) [-3] ! parse: GO:0048918 using "posterior lateral line nerve development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=MA:0000217, OBO_REL:unfolds_in=ZFA:0000944]) [-3] ! parse: GO:0048918 using "posterior lateral line nerve development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00005105, OBO_REL:unfolds_in=ZFA:0000944]) [-3] ! parse: GO:0048918 using "posterior lateral line nerve development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000217, OBO_REL:unfolds_in=ZFA:0000944]) [-3] ! parse: GO:0048918 using "posterior lateral line nerve development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000175]) [-2] ! parse: GO:0048918 using "posterior lateral line nerve development" => cdef(GO:0032502, [results_in_complete_developmental_of=cell:posterior_lateral_line_nerve]) [-2] ! parse: GO:0048918 using "posterior lateral line nerve development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(FBbt:00005105, [OBO_REL:part_of=ZFA:0000944])]) [-3] ! parse: GO:0048918 using "posterior lateral line nerve development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(MA:0000217, [OBO_REL:part_of=ZFA:0000944])]) [-3] ! no existing xp def ! def: "The process whose specific outcome is the progression of the posterior lateral line nerve over time, form its formation to the mature structure. The posterior lateral line nerve innervates hair cells of the PLL and projects to an octavolateralis column in the hindbrain that consists of the medial octavolateralis nucleus (MON), the caudal octavolateralis nucleus, and the magnocellular nucleus." ! PROPOSED: developmental process that results_in_complete_developmental_of posterior lateral line nerve [cdef(GO:0032502, [results_in_complete_developmental_of=cell:posterior_lateral_line_nerve])] [Term] id: GO:0048918 ! posterior lateral line nerve development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of cell:posterior_lateral_line_nerve ! posterior lateral line nerve ! seconds spent parsing GO:0048918: 0.12 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0048919 using "posterior lateral line neuromast development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=ZFA:0000243, OBO_REL:unfolds_in=ZFA:0000944]) [-3] ! parse: GO:0048919 using "posterior lateral line neuromast development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000243, OBO_REL:unfolds_in=ZFA:0000944]) [-3] ! parse: GO:0048919 using "posterior lateral line neuromast development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(ZFA:0000243, [OBO_REL:part_of=ZFA:0000944])]) [-3] ! parse: GO:0048919 using "posterior lateral line neuromast development" => cdef(GO:0048884, [OBO_REL:results_in_developmental_progression_of=ZFA:0000944]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the posterior lateral line neuromast over time, from its formation to the mature structure. The neuromast is the sensory receptor of the anterior lateral line system and is composed of a population of sensory hair cells, and nonsensory supporting cells and mantle cells. Neuromast are located superficially on the epithelium or in lateral line canals." ! PROPOSED: neuromast development that OBO_REL:results_in_developmental_progression_of posterior lateral line [cdef(GO:0048884, [OBO_REL:results_in_developmental_progression_of=ZFA:0000944])] [Term] id: GO:0048919 ! posterior lateral line neuromast development intersection_of: GO:0048884 ! neuromast development intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0000944 ! posterior lateral line synonym: "pll neuromast development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0048919: 6.58 ! No parse for: GO:0048920 posterior lateral line neuromast primordium migration ! No relation defined: results_in_complete_developmental_of ! parse: GO:0048921 using "posterior lateral line neuromast cupula development" => cdef(GO:0032502, [and=results_in_complete_developmental_of(anon(cupula, anatomy))/unfolds_in(ZFA:0000243), OBO_REL:unfolds_in=ZFA:0000944]) [-3] ! parse: GO:0048921 using "posterior lateral line neuromast cupula development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(cupula, anatomy), OBO_REL:unfolds_in=cdef(ZFA:0000243, [OBO_REL:part_of=ZFA:0000944])]) [-9] ! parse: GO:0048921 using "posterior lateral line neuromast cupula development" => cdef(GO:0048887, [OBO_REL:results_in_developmental_progression_of=ZFA:0000243, OBO_REL:unfolds_in=ZFA:0000944]) [-3] ! parse: GO:0048921 using "posterior lateral line neuromast cupula development" => cdef(GO:0048887, [OBO_REL:results_in_developmental_progression_of=cdef(ZFA:0000243, [OBO_REL:part_of=ZFA:0000944])]) [-3] ! no existing xp def ! def: "The process whose specific outcome is the progression of the posterior lateral line neuromast cupula over time, from its formation to the mature structure. The cupula is secreted by mantle cells and the ciliary bundles of all of the hair cells of the neuromast are embedded in it. The cupula provides a mechanical linkage between the hair cells and the external hydrodynamic environment. The cupula of superficial neuromasts grows continuously, while the height of the cupula of canal neuromasts is limited by canal diameter." ! PROPOSED: cupula development that OBO_REL:results_in_developmental_progression_of cdef(ZFA:0000243, [OBO_REL:part_of=ZFA:0000944]) [cdef(GO:0048887, [OBO_REL:results_in_developmental_progression_of=cdef(ZFA:0000243, [OBO_REL:part_of=ZFA:0000944])])] [Term] id: GO:0048921 ! posterior lateral line neuromast cupula development intersection_of: GO:0048887 ! cupula development intersection_of: OBO_REL:results_in_developmental_progression_of pll_lateral_line_neuromast synonym: "pll neuromast cupula development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0048921: 6.59 ! No parse for: GO:0048922 posterior lateral line neuromast deposition ! parse: GO:0048923 using "posterior lateral line neuromast hair cell differentiation" => cdef(GO:0010054, [OBO_REL:results_in_acquisition_of_features_of=anon(posterior lateral line neuromast, cell)]) [-33] ! parse: GO:0048923 using "posterior lateral line neuromast hair cell differentiation" => cdef(GO:0010054, [OBO_REL:results_in_developmental_progression_of=ZFA:0000243, OBO_REL:unfolds_in=ZFA:0000944]) [-3] ! parse: GO:0048923 using "posterior lateral line neuromast hair cell differentiation" => cdef(GO:0010054, [OBO_REL:results_in_developmental_progression_of=cdef(ZFA:0000243, [OBO_REL:part_of=ZFA:0000944])]) [-3] ! parse: GO:0048923 using "posterior lateral line neuromast hair cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000000, OBO_REL:unfolds_in=cdef(cdef(FBbt:00005182, [OBO_REL:part_of=ZFA:0000243]), [OBO_REL:part_of=ZFA:0000944])]) [-5] ! parse: GO:0048923 using "posterior lateral line neuromast hair cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000299, OBO_REL:unfolds_in=cdef(ZFA:0000243, [OBO_REL:part_of=ZFA:0000944])]) [-4] ! parse: GO:0048923 using "posterior lateral line neuromast hair cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000374, OBO_REL:unfolds_in=cdef(ZFA:0000243, [OBO_REL:part_of=ZFA:0000944])]) [-4] ! parse: GO:0048923 using "posterior lateral line neuromast hair cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000855, OBO_REL:unfolds_in=cdef(ZFA:0000243, [OBO_REL:part_of=ZFA:0000944])]) [-4] ! parse: GO:0048923 using "posterior lateral line neuromast hair cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000856, OBO_REL:unfolds_in=ZFA:0000944]) [-3] ! parse: GO:0048923 using "posterior lateral line neuromast hair cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(posterior lateral line neuromast hair, cell)]) [-38] ! parse: GO:0048923 using "posterior lateral line neuromast hair cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(posterior lateral line neuromast hair cell, cell)]) [-43] ! parse: GO:0048923 using "posterior lateral line neuromast hair cell differentiation" => cdef(GO:0030154, [and=results_in_acquisition_of_features_of(CL:0000000)/unfolds_in(FBbt:00005182), OBO_REL:unfolds_in=cdef(ZFA:0000243, [OBO_REL:part_of=ZFA:0000944])]) [-4] ! parse: GO:0048923 using "posterior lateral line neuromast hair cell differentiation" => cdef(GO:0030154, [and=results_in_acquisition_of_features_of(CL:0000000)/unfolds_in(that(FBbt:00005182, part_of(ZFA:0000243))), OBO_REL:unfolds_in=ZFA:0000944]) [-3] ! parse: GO:0048923 using "posterior lateral line neuromast hair cell differentiation" => cdef(GO:0030154, [and=results_in_acquisition_of_features_of(CL:0000299)/unfolds_in(ZFA:0000243), OBO_REL:unfolds_in=ZFA:0000944]) [-3] ! parse: GO:0048923 using "posterior lateral line neuromast hair cell differentiation" => cdef(GO:0030154, [and=results_in_acquisition_of_features_of(CL:0000374)/unfolds_in(ZFA:0000243), OBO_REL:unfolds_in=ZFA:0000944]) [-3] ! parse: GO:0048923 using "posterior lateral line neuromast hair cell differentiation" => cdef(GO:0030154, [and=results_in_acquisition_of_features_of(CL:0000855)/unfolds_in(ZFA:0000243), OBO_REL:unfolds_in=ZFA:0000944]) [-3] ! parse: GO:0048923 using "posterior lateral line neuromast hair cell differentiation" => cdef(GO:0030154, [and=and(results_in_acquisition_of_features_of(CL:0000000), unfolds_in(FBbt:00005182))/unfolds_in(ZFA:0000243), OBO_REL:unfolds_in=ZFA:0000944]) [-3] ! parse: GO:0048923 using "posterior lateral line neuromast hair cell differentiation" => cdef(GO:0035315, [OBO_REL:results_in_acquisition_of_features_of=anon(posterior lateral line neuromast, cell)]) [-33] ! parse: GO:0048923 using "posterior lateral line neuromast hair cell differentiation" => cdef(GO:0035315, [OBO_REL:results_in_developmental_progression_of=ZFA:0000243, OBO_REL:unfolds_in=ZFA:0000944]) [-3] ! parse: GO:0048923 using "posterior lateral line neuromast hair cell differentiation" => cdef(GO:0035315, [OBO_REL:results_in_developmental_progression_of=cdef(ZFA:0000243, [OBO_REL:part_of=ZFA:0000944])]) [-3] ! parse: GO:0048923 using "posterior lateral line neuromast hair cell differentiation" => cdef(GO:0048886, [OBO_REL:results_in_acquisition_of_features_of=anon(posterior lateral line, cell)]) [-23] ! parse: GO:0048923 using "posterior lateral line neuromast hair cell differentiation" => cdef(GO:0048886, [OBO_REL:results_in_developmental_progression_of=ZFA:0000944]) [-2] ! no existing xp def ! def: "The process whereby a relatively unspecialized cell acquires specialized features of a posterior lateral line neuromast hair cell. (N.B. This may be development of neuromast hair cell type or a set of cell of neuromast hair cell type. This will involve the change of a cell or set of cells from one cell identity to another). Hair cells are the sensory receptors of the neuromast and are located in a portion of the neuromast called the sensory strip. Each hair cell of the neuromast is morphologically polarized as a result of the relative position of the single kinocilium and the clusters of stereocilia on its apical surface. There are approximately seven hair cells within each neuromast, with each hair cell innervated by afferent and efferent neurons." ! PROPOSED: neuromast hair cell differentiation that OBO_REL:results_in_developmental_progression_of posterior lateral line [cdef(GO:0048886, [OBO_REL:results_in_developmental_progression_of=ZFA:0000944])] [Term] id: GO:0048923 ! posterior lateral line neuromast hair cell differentiation intersection_of: GO:0048886 ! neuromast hair cell differentiation intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0000944 ! posterior lateral line synonym: "pll neuromast hair cell cell differentiation" EXACT [OBOL:automatic] synonym: "pll neuromast hair cell differentiation" EXACT [OBOL:automatic] ! seconds spent parsing GO:0048923: 17.63 ! parse: GO:0048924 using "posterior lateral line neuromast mantle cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000851, OBO_REL:unfolds_in=ZFA:0000944]) [-3] ! parse: GO:0048924 using "posterior lateral line neuromast mantle cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(mantle, cell), OBO_REL:unfolds_in=cdef(ZFA:0000243, [OBO_REL:part_of=ZFA:0000944])]) [-9] ! parse: GO:0048924 using "posterior lateral line neuromast mantle cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(mantle cell, cell), OBO_REL:unfolds_in=cdef(ZFA:0000243, [OBO_REL:part_of=ZFA:0000944])]) [-14] ! parse: GO:0048924 using "posterior lateral line neuromast mantle cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(posterior lateral line neuromast mantle, cell)]) [-40] ! parse: GO:0048924 using "posterior lateral line neuromast mantle cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(posterior lateral line neuromast mantle cell, cell)]) [-45] ! parse: GO:0048924 using "posterior lateral line neuromast mantle cell differentiation" => cdef(GO:0030154, [and=results_in_acquisition_of_features_of(anon(mantle, cell))/unfolds_in(ZFA:0000243), OBO_REL:unfolds_in=ZFA:0000944]) [-3] ! parse: GO:0048924 using "posterior lateral line neuromast mantle cell differentiation" => cdef(GO:0030154, [and=results_in_acquisition_of_features_of(anon(mantle cell, cell))/unfolds_in(ZFA:0000243), OBO_REL:unfolds_in=ZFA:0000944]) [-3] ! parse: GO:0048924 using "posterior lateral line neuromast mantle cell differentiation" => cdef(GO:0048888, [OBO_REL:results_in_acquisition_of_features_of=anon(posterior lateral line, cell)]) [-23] ! parse: GO:0048924 using "posterior lateral line neuromast mantle cell differentiation" => cdef(GO:0048888, [OBO_REL:results_in_developmental_progression_of=ZFA:0000944]) [-2] ! no existing xp def ! def: "The process whereby a relatively unspecialized cell acquires specialized features of a posterior lateral line neuromast mantle cell. (N.B. This may be development of neuromast mantle cell type or a set of cells of neuromast mantle cell type. This will involve the change of a cell or set of cells from one cell identity to another). Mantle cells are non-sensory cells that surround the sensory strip, separating the neuromast from the epidermis. Mantle cells secrete the cupula in which the ciliary bundles of all of the hair cells are embedded." ! PROPOSED: neuromast mantle cell differentiation that OBO_REL:results_in_developmental_progression_of posterior lateral line [cdef(GO:0048888, [OBO_REL:results_in_developmental_progression_of=ZFA:0000944])] [Term] id: GO:0048924 ! posterior lateral line neuromast mantle cell differentiation intersection_of: GO:0048888 ! neuromast mantle cell differentiation intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0000944 ! posterior lateral line synonym: "pll neuromast mantle cell cell differentiation" EXACT [OBOL:automatic] synonym: "pll neuromast mantle cell differentiation" EXACT [OBOL:automatic] ! seconds spent parsing GO:0048924: 8.68 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0048925 using "lateral line system development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000034]) [-2] ! parse: GO:0048925 using "lateral line system development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(system, anatomy), OBO_REL:unfolds_in=ZFA:0001469]) [-8] ! parse: GO:0048925 using "lateral line system development" => cdef(GO:0048731, [OBO_REL:results_in_developmental_progression_of=ZFA:0001469]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the lateral line system over time, from its formation to the mature structure. The lateral line system is a network of sensory organs (neuromasts) and lateral line nerves located superficially on the skin or just under the skin in fluid-filled canals on the head and body of all fishes and most amphibians. The lateral line system develops from cranial ectodermal placodes situated between the eye and ear." ! PROPOSED: system development that OBO_REL:results_in_developmental_progression_of lateral line [cdef(GO:0048731, [OBO_REL:results_in_developmental_progression_of=ZFA:0001469])] [Term] id: GO:0048925 ! lateral line system development intersection_of: GO:0048731 ! system development intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0001469 ! lateral line ! seconds spent parsing GO:0048925: 6.21 ! parse: GO:0048927 using "posterior lateral line neuromast support cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000852, OBO_REL:unfolds_in=ZFA:0000944]) [-3] ! parse: GO:0048927 using "posterior lateral line neuromast support cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(posterior lateral line neuromast support, cell)]) [-41] ! parse: GO:0048927 using "posterior lateral line neuromast support cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(posterior lateral line neuromast support cell, cell)]) [-46] ! parse: GO:0048927 using "posterior lateral line neuromast support cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(support, cell), OBO_REL:unfolds_in=cdef(ZFA:0000243, [OBO_REL:part_of=ZFA:0000944])]) [-10] ! parse: GO:0048927 using "posterior lateral line neuromast support cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(support cell, cell), OBO_REL:unfolds_in=cdef(ZFA:0000243, [OBO_REL:part_of=ZFA:0000944])]) [-15] ! parse: GO:0048927 using "posterior lateral line neuromast support cell differentiation" => cdef(GO:0030154, [and=results_in_acquisition_of_features_of(anon(support, cell))/unfolds_in(ZFA:0000243), OBO_REL:unfolds_in=ZFA:0000944]) [-3] ! parse: GO:0048927 using "posterior lateral line neuromast support cell differentiation" => cdef(GO:0030154, [and=results_in_acquisition_of_features_of(anon(support cell, cell))/unfolds_in(ZFA:0000243), OBO_REL:unfolds_in=ZFA:0000944]) [-3] ! parse: GO:0048927 using "posterior lateral line neuromast support cell differentiation" => cdef(GO:0048889, [OBO_REL:results_in_acquisition_of_features_of=anon(posterior lateral line, cell)]) [-23] ! parse: GO:0048927 using "posterior lateral line neuromast support cell differentiation" => cdef(GO:0048889, [OBO_REL:results_in_developmental_progression_of=ZFA:0000944]) [-2] ! no existing xp def ! def: "The process whereby a relatively unspecialized cell acquires specialized features of a posterior lateral line neuromast support cell. Support cells are non-sensory cells of the neuromast that extend between the sensory hair cells from the basement membrane to the apical surface; they are surrounded by mantle cells." ! PROPOSED: neuromast support cell differentiation that OBO_REL:results_in_developmental_progression_of posterior lateral line [cdef(GO:0048889, [OBO_REL:results_in_developmental_progression_of=ZFA:0000944])] [Term] id: GO:0048927 ! posterior lateral line neuromast support cell differentiation intersection_of: GO:0048889 ! neuromast support cell differentiation intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0000944 ! posterior lateral line synonym: "pll neuromast support cell cell differentiation" EXACT [OBOL:automatic] synonym: "pll neuromast support cell differentiation" EXACT [OBOL:automatic] ! seconds spent parsing GO:0048927: 9.46 ! parse: GO:0048928 using "posterior lateral line ganglion neuron differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000540, OBO_REL:unfolds_in=ZFA:0001314]) [-3] ! parse: GO:0048928 using "posterior lateral line ganglion neuron differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000540, OBO_REL:unfolds_in=cdef(FBbt:00005137, [OBO_REL:part_of=ZFA:0000944])]) [-4] ! parse: GO:0048928 using "posterior lateral line ganglion neuron differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000540, OBO_REL:unfolds_in=cdef(MA:0002406, [OBO_REL:part_of=ZFA:0000944])]) [-4] ! parse: GO:0048928 using "posterior lateral line ganglion neuron differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000540, OBO_REL:unfolds_in=cdef(ZFA:0000190, [OBO_REL:part_of=ZFA:0000944])]) [-4] ! parse: GO:0048928 using "posterior lateral line ganglion neuron differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(ganglion neuron, cell), OBO_REL:unfolds_in=ZFA:0000944]) [-17] ! parse: GO:0048928 using "posterior lateral line ganglion neuron differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(posterior lateral line ganglion neuron, cell)]) [-39] ! parse: GO:0048928 using "posterior lateral line ganglion neuron differentiation" => cdef(GO:0030154, [and=results_in_acquisition_of_features_of(CL:0000540)/unfolds_in(FBbt:00005137), OBO_REL:unfolds_in=ZFA:0000944]) [-3] ! parse: GO:0048928 using "posterior lateral line ganglion neuron differentiation" => cdef(GO:0030154, [and=results_in_acquisition_of_features_of(CL:0000540)/unfolds_in(MA:0002406), OBO_REL:unfolds_in=ZFA:0000944]) [-3] ! parse: GO:0048928 using "posterior lateral line ganglion neuron differentiation" => cdef(GO:0030154, [and=results_in_acquisition_of_features_of(CL:0000540)/unfolds_in(ZFA:0000190), OBO_REL:unfolds_in=ZFA:0000944]) [-3] ! parse: GO:0048928 using "posterior lateral line ganglion neuron differentiation" => cdef(GO:0030182, [OBO_REL:results_in_acquisition_of_features_of=anon(ganglion, cell), OBO_REL:unfolds_in=ZFA:0000944]) [-10] ! parse: GO:0048928 using "posterior lateral line ganglion neuron differentiation" => cdef(GO:0030182, [OBO_REL:results_in_acquisition_of_features_of=anon(posterior lateral line ganglion, cell)]) [-32] ! parse: GO:0048928 using "posterior lateral line ganglion neuron differentiation" => cdef(GO:0030182, [OBO_REL:results_in_developmental_progression_of=FBbt:00005137, OBO_REL:unfolds_in=ZFA:0000944]) [-3] ! parse: GO:0048928 using "posterior lateral line ganglion neuron differentiation" => cdef(GO:0030182, [OBO_REL:results_in_developmental_progression_of=MA:0002406, OBO_REL:unfolds_in=ZFA:0000944]) [-3] ! parse: GO:0048928 using "posterior lateral line ganglion neuron differentiation" => cdef(GO:0030182, [OBO_REL:results_in_developmental_progression_of=ZFA:0000190, OBO_REL:unfolds_in=ZFA:0000944]) [-3] ! parse: GO:0048928 using "posterior lateral line ganglion neuron differentiation" => cdef(GO:0030182, [OBO_REL:results_in_developmental_progression_of=ZFA:0001314]) [-2] ! parse: GO:0048928 using "posterior lateral line ganglion neuron differentiation" => cdef(GO:0030182, [OBO_REL:results_in_developmental_progression_of=cdef(FBbt:00005137, [OBO_REL:part_of=ZFA:0000944])]) [-3] ! parse: GO:0048928 using "posterior lateral line ganglion neuron differentiation" => cdef(GO:0030182, [OBO_REL:results_in_developmental_progression_of=cdef(MA:0002406, [OBO_REL:part_of=ZFA:0000944])]) [-3] ! parse: GO:0048928 using "posterior lateral line ganglion neuron differentiation" => cdef(GO:0030182, [OBO_REL:results_in_developmental_progression_of=cdef(ZFA:0000190, [OBO_REL:part_of=ZFA:0000944])]) [-3] ! parse: GO:0048928 using "posterior lateral line ganglion neuron differentiation" => cdef(GO:0048891, [OBO_REL:results_in_acquisition_of_features_of=anon(posterior, cell)]) [-10] ! no existing xp def ! def: "The process whereby a relatively unspecialized cell acquires specialized features of a neuron of the posterior lateral line ganglion." ! PROPOSED: neuron differentiation that OBO_REL:results_in_developmental_progression_of posterior lateral line ganglion [cdef(GO:0030182, [OBO_REL:results_in_developmental_progression_of=ZFA:0001314])] [Term] id: GO:0048928 ! posterior lateral line ganglion neuron differentiation intersection_of: GO:0030182 ! neuron differentiation intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0001314 ! posterior lateral line ganglion ! seconds spent parsing GO:0048928: 20.43 ! Already have xp for: GO:0048930 glial cell migration in the posterior lateral line nerve ! CURRENT : glial cell migration that OBO_REL:unfolds_in posterior lateral line nerve and OBO_REL:unfolds_in posterior lateral line nerve [cdef(GO:0008347, [OBO_REL:unfolds_in=cell:posterior_lateral_line_nerve, OBO_REL:unfolds_in=continuant:posterior_lateral_line_nerve])] ! parse: GO:0048931 using "posterior lateral line nerve glial cell differentiation" => cdef(GO:0010001, [OBO_REL:results_in_acquisition_of_features_of=cell:posterior_lateral_line_nerve]) [-2] ! parse: GO:0048931 using "posterior lateral line nerve glial cell differentiation" => cdef(GO:0010001, [OBO_REL:results_in_acquisition_of_features_of=anon(nerve, cell), OBO_REL:unfolds_in=ZFA:0000944]) [-7] ! parse: GO:0048931 using "posterior lateral line nerve glial cell differentiation" => cdef(GO:0010001, [OBO_REL:results_in_developmental_progression_of=FBbt:00005105, OBO_REL:unfolds_in=ZFA:0000944]) [-3] ! parse: GO:0048931 using "posterior lateral line nerve glial cell differentiation" => cdef(GO:0010001, [OBO_REL:results_in_developmental_progression_of=MA:0000217, OBO_REL:unfolds_in=ZFA:0000944]) [-3] ! parse: GO:0048931 using "posterior lateral line nerve glial cell differentiation" => cdef(GO:0010001, [OBO_REL:results_in_developmental_progression_of=ZFA:0000175]) [-2] ! parse: GO:0048931 using "posterior lateral line nerve glial cell differentiation" => cdef(GO:0010001, [OBO_REL:results_in_developmental_progression_of=cell:posterior_lateral_line_nerve]) [-2] ! parse: GO:0048931 using "posterior lateral line nerve glial cell differentiation" => cdef(GO:0010001, [OBO_REL:results_in_developmental_progression_of=cdef(FBbt:00005105, [OBO_REL:part_of=ZFA:0000944])]) [-3] ! parse: GO:0048931 using "posterior lateral line nerve glial cell differentiation" => cdef(GO:0010001, [OBO_REL:results_in_developmental_progression_of=cdef(MA:0000217, [OBO_REL:part_of=ZFA:0000944])]) [-3] ! parse: GO:0048931 using "posterior lateral line nerve glial cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000125, OBO_REL:unfolds_in=ZFA:0000175]) [-3] ! parse: GO:0048931 using "posterior lateral line nerve glial cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000125, OBO_REL:unfolds_in=cell:posterior_lateral_line_nerve]) [-3] ! parse: GO:0048931 using "posterior lateral line nerve glial cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000125, OBO_REL:unfolds_in=cdef(FBbt:00005105, [OBO_REL:part_of=ZFA:0000944])]) [-4] ! parse: GO:0048931 using "posterior lateral line nerve glial cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000125, OBO_REL:unfolds_in=cdef(MA:0000217, [OBO_REL:part_of=ZFA:0000944])]) [-4] ! parse: GO:0048931 using "posterior lateral line nerve glial cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(nerve glial, cell), OBO_REL:unfolds_in=ZFA:0000944]) [-13] ! parse: GO:0048931 using "posterior lateral line nerve glial cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(nerve glial cell, cell), OBO_REL:unfolds_in=ZFA:0000944]) [-18] ! parse: GO:0048931 using "posterior lateral line nerve glial cell differentiation" => cdef(GO:0030154, [and=results_in_acquisition_of_features_of(CL:0000125)/unfolds_in(FBbt:00005105), OBO_REL:unfolds_in=ZFA:0000944]) [-3] ! parse: GO:0048931 using "posterior lateral line nerve glial cell differentiation" => cdef(GO:0030154, [and=results_in_acquisition_of_features_of(CL:0000125)/unfolds_in(MA:0000217), OBO_REL:unfolds_in=ZFA:0000944]) [-3] ! no existing xp def ! def: "The process whereby a relatively unspecialized cell acquires specialized features of a glial cell in the posterior lateral line nerve." ! PROPOSED: glial cell differentiation that OBO_REL:results_in_developmental_progression_of posterior lateral line nerve [cdef(GO:0010001, [OBO_REL:results_in_developmental_progression_of=cell:posterior_lateral_line_nerve])] [Term] id: GO:0048931 ! posterior lateral line nerve glial cell differentiation intersection_of: GO:0010001 ! glial cell differentiation intersection_of: OBO_REL:results_in_developmental_progression_of cell:posterior_lateral_line_nerve ! posterior lateral line nerve synonym: "posterior lateral line nerve glia cell differentiation" EXACT [OBOL:automatic] synonym: "posterior lateral line nerve glial cell cell differentiation" EXACT [OBOL:automatic] synonym: "posterior lateral line nerve neuroglia differentiation" EXACT [OBOL:automatic] synonym: "posterior lateral line nerve neuroglial cell cell differentiation" EXACT [OBOL:automatic] synonym: "posterior lateral line nerve neuroglial cell differentiation" EXACT [OBOL:automatic] ! seconds spent parsing GO:0048931: 21.49 ! parse: GO:0048934 using "peripheral nervous system neuron differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000540, OBO_REL:unfolds_in=FBbt:00005098]) [-3] ! parse: GO:0048934 using "peripheral nervous system neuron differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000540, OBO_REL:unfolds_in=MA:0000218]) [-3] ! parse: GO:0048934 using "peripheral nervous system neuron differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000540, OBO_REL:unfolds_in=ZFA:0000142]) [-3] ! parse: GO:0048934 using "peripheral nervous system neuron differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(peripheral nervous system neuron, cell)]) [-33] ! parse: GO:0048934 using "peripheral nervous system neuron differentiation" => cdef(GO:0030182, [OBO_REL:results_in_acquisition_of_features_of=anon(peripheral nervous system, cell)]) [-26] ! parse: GO:0048934 using "peripheral nervous system neuron differentiation" => cdef(GO:0030182, [OBO_REL:results_in_developmental_progression_of=FBbt:00005098]) [-2] ! parse: GO:0048934 using "peripheral nervous system neuron differentiation" => cdef(GO:0030182, [OBO_REL:results_in_developmental_progression_of=MA:0000218]) [-2] ! parse: GO:0048934 using "peripheral nervous system neuron differentiation" => cdef(GO:0030182, [OBO_REL:results_in_developmental_progression_of=ZFA:0000142]) [-2] ! no existing xp def ! def: "The process whereby a relatively unspecialized cell acquires specialized features of a neuron whose cell body resides in the peripheral nervous system." ! PROPOSED: neuron differentiation that OBO_REL:results_in_developmental_progression_of peripheral nervous system [cdef(GO:0030182, [OBO_REL:results_in_developmental_progression_of=ZFA:0000142])] [Term] id: GO:0048934 ! peripheral nervous system neuron differentiation intersection_of: GO:0030182 ! neuron differentiation intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0000142 ! peripheral nervous system synonym: "pns nerve cell cell differentiation" EXACT [OBOL:automatic] synonym: "pns nerve cell differentiation" EXACT [OBOL:automatic] synonym: "pns neuron cell differentiation" EXACT [OBOL:automatic] synonym: "pns neuron differentiation" EXACT [OBOL:automatic] ! seconds spent parsing GO:0048934: 15.31 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0048935 using "peripheral nervous system neuron development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=CL:0000540, OBO_REL:unfolds_in=FBbt:00005098]) [-3] ! parse: GO:0048935 using "peripheral nervous system neuron development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=CL:0000540, OBO_REL:unfolds_in=MA:0000218]) [-3] ! parse: GO:0048935 using "peripheral nervous system neuron development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=CL:0000540, OBO_REL:unfolds_in=ZFA:0000142]) [-3] ! parse: GO:0048935 using "peripheral nervous system neuron development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=FBbt:00005106, OBO_REL:unfolds_in=FBbt:00005098]) [-3] ! parse: GO:0048935 using "peripheral nervous system neuron development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=FBbt:00005106, OBO_REL:unfolds_in=MA:0000218]) [-3] ! parse: GO:0048935 using "peripheral nervous system neuron development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=FBbt:00005106, OBO_REL:unfolds_in=ZFA:0000142]) [-3] ! parse: GO:0048935 using "peripheral nervous system neuron development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=ZFA:0009248, OBO_REL:unfolds_in=FBbt:00005098]) [-3] ! parse: GO:0048935 using "peripheral nervous system neuron development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=ZFA:0009248, OBO_REL:unfolds_in=MA:0000218]) [-3] ! parse: GO:0048935 using "peripheral nervous system neuron development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=ZFA:0009248, OBO_REL:unfolds_in=ZFA:0000142]) [-3] ! parse: GO:0048935 using "peripheral nervous system neuron development" => cdef(GO:0032502, [results_in_complete_developmental_of=CL:0000540, OBO_REL:unfolds_in=FBbt:00005098]) [-3] ! parse: GO:0048935 using "peripheral nervous system neuron development" => cdef(GO:0032502, [results_in_complete_developmental_of=CL:0000540, OBO_REL:unfolds_in=MA:0000218]) [-3] ! parse: GO:0048935 using "peripheral nervous system neuron development" => cdef(GO:0032502, [results_in_complete_developmental_of=CL:0000540, OBO_REL:unfolds_in=ZFA:0000142]) [-3] ! parse: GO:0048935 using "peripheral nervous system neuron development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00005106, OBO_REL:unfolds_in=FBbt:00005098]) [-3] ! parse: GO:0048935 using "peripheral nervous system neuron development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00005106, OBO_REL:unfolds_in=MA:0000218]) [-3] ! parse: GO:0048935 using "peripheral nervous system neuron development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00005106, OBO_REL:unfolds_in=ZFA:0000142]) [-3] ! parse: GO:0048935 using "peripheral nervous system neuron development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0009248, OBO_REL:unfolds_in=FBbt:00005098]) [-3] ! parse: GO:0048935 using "peripheral nervous system neuron development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0009248, OBO_REL:unfolds_in=MA:0000218]) [-3] ! parse: GO:0048935 using "peripheral nervous system neuron development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0009248, OBO_REL:unfolds_in=ZFA:0000142]) [-3] ! parse: GO:0048935 using "peripheral nervous system neuron development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(FBbt:00005106, [OBO_REL:part_of=FBbt:00005098])]) [-3] ! parse: GO:0048935 using "peripheral nervous system neuron development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(FBbt:00005106, [OBO_REL:part_of=MA:0000218])]) [-3] ! parse: GO:0048935 using "peripheral nervous system neuron development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(FBbt:00005106, [OBO_REL:part_of=ZFA:0000142])]) [-3] ! parse: GO:0048935 using "peripheral nervous system neuron development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(ZFA:0009248, [OBO_REL:part_of=FBbt:00005098])]) [-3] ! parse: GO:0048935 using "peripheral nervous system neuron development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(ZFA:0009248, [OBO_REL:part_of=MA:0000218])]) [-3] ! parse: GO:0048935 using "peripheral nervous system neuron development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(ZFA:0009248, [OBO_REL:part_of=ZFA:0000142])]) [-3] ! no existing xp def ! def: "The process whose specific outcome is the progression of a neuron whose cell body is located in the peripheral nervous system, from initial commitment of the cell to a neuronal fate, to the fully functional differentiated neuron." ! PROPOSED: developmental process that results_in_complete_developmental_of cdef(ZFA:0009248, [OBO_REL:part_of=ZFA:0000142]) [cdef(GO:0032502, [results_in_complete_developmental_of=cdef(ZFA:0009248, [OBO_REL:part_of=ZFA:0000142])])] [Term] id: GO:0048935 ! peripheral nervous system neuron development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of peripheral_nervous_system_neuron synonym: "neuron of peripheral nervous system development" EXACT [OBOL:automatic] synonym: "neuron of the peripheral nervous system development" EXACT [OBOL:automatic] synonym: "pns neuron development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0048935: 16.2 ! parse: GO:0048936 using "peripheral nervous system neuron axonogenesis" => cdef(GO:0007409, [OBO_REL:results_in_developmental_progression_of=CL:0000540, OBO_REL:unfolds_in=FBbt:00005098]) [-3] ! parse: GO:0048936 using "peripheral nervous system neuron axonogenesis" => cdef(GO:0007409, [OBO_REL:results_in_developmental_progression_of=CL:0000540, OBO_REL:unfolds_in=MA:0000218]) [-3] ! parse: GO:0048936 using "peripheral nervous system neuron axonogenesis" => cdef(GO:0007409, [OBO_REL:results_in_developmental_progression_of=CL:0000540, OBO_REL:unfolds_in=ZFA:0000142]) [-3] ! parse: GO:0048936 using "peripheral nervous system neuron axonogenesis" => cdef(GO:0007409, [OBO_REL:results_in_developmental_progression_of=FBbt:00005106, OBO_REL:unfolds_in=FBbt:00005098]) [-3] ! parse: GO:0048936 using "peripheral nervous system neuron axonogenesis" => cdef(GO:0007409, [OBO_REL:results_in_developmental_progression_of=FBbt:00005106, OBO_REL:unfolds_in=MA:0000218]) [-3] ! parse: GO:0048936 using "peripheral nervous system neuron axonogenesis" => cdef(GO:0007409, [OBO_REL:results_in_developmental_progression_of=FBbt:00005106, OBO_REL:unfolds_in=ZFA:0000142]) [-3] ! parse: GO:0048936 using "peripheral nervous system neuron axonogenesis" => cdef(GO:0007409, [OBO_REL:results_in_developmental_progression_of=ZFA:0009248, OBO_REL:unfolds_in=FBbt:00005098]) [-3] ! parse: GO:0048936 using "peripheral nervous system neuron axonogenesis" => cdef(GO:0007409, [OBO_REL:results_in_developmental_progression_of=ZFA:0009248, OBO_REL:unfolds_in=MA:0000218]) [-3] ! parse: GO:0048936 using "peripheral nervous system neuron axonogenesis" => cdef(GO:0007409, [OBO_REL:results_in_developmental_progression_of=ZFA:0009248, OBO_REL:unfolds_in=ZFA:0000142]) [-3] ! parse: GO:0048936 using "peripheral nervous system neuron axonogenesis" => cdef(GO:0007409, [OBO_REL:results_in_developmental_progression_of=cdef(FBbt:00005106, [OBO_REL:part_of=FBbt:00005098])]) [-3] ! parse: GO:0048936 using "peripheral nervous system neuron axonogenesis" => cdef(GO:0007409, [OBO_REL:results_in_developmental_progression_of=cdef(FBbt:00005106, [OBO_REL:part_of=MA:0000218])]) [-3] ! parse: GO:0048936 using "peripheral nervous system neuron axonogenesis" => cdef(GO:0007409, [OBO_REL:results_in_developmental_progression_of=cdef(FBbt:00005106, [OBO_REL:part_of=ZFA:0000142])]) [-3] ! parse: GO:0048936 using "peripheral nervous system neuron axonogenesis" => cdef(GO:0007409, [OBO_REL:results_in_developmental_progression_of=cdef(ZFA:0009248, [OBO_REL:part_of=FBbt:00005098])]) [-3] ! parse: GO:0048936 using "peripheral nervous system neuron axonogenesis" => cdef(GO:0007409, [OBO_REL:results_in_developmental_progression_of=cdef(ZFA:0009248, [OBO_REL:part_of=MA:0000218])]) [-3] ! parse: GO:0048936 using "peripheral nervous system neuron axonogenesis" => cdef(GO:0007409, [OBO_REL:results_in_developmental_progression_of=cdef(ZFA:0009248, [OBO_REL:part_of=ZFA:0000142])]) [-3] ! no existing xp def ! def: "Generation of a long process from a neuron whose cell body resides in the peripheral nervous system. The axon carries action potential from the cell body towards target cells." ! PROPOSED: axonogenesis that OBO_REL:results_in_developmental_progression_of cdef(ZFA:0009248, [OBO_REL:part_of=ZFA:0000142]) [cdef(GO:0007409, [OBO_REL:results_in_developmental_progression_of=cdef(ZFA:0009248, [OBO_REL:part_of=ZFA:0000142])])] [Term] id: GO:0048936 ! peripheral nervous system neuron axonogenesis intersection_of: GO:0007409 ! axonogenesis intersection_of: OBO_REL:results_in_developmental_progression_of peripheral_nervous_system_neuron synonym: "pns neuron axonogenesis" EXACT [OBOL:automatic] ! seconds spent parsing GO:0048936: 15.51 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0048937 using "lateral line nerve glial cell development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=CL:0000125, OBO_REL:unfolds_in=ZFA:0001479]) [-3] ! parse: GO:0048937 using "lateral line nerve glial cell development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=CL:0000125, OBO_REL:unfolds_in=cdef(FBbt:00005105, [OBO_REL:part_of=ZFA:0001469])]) [-4] ! parse: GO:0048937 using "lateral line nerve glial cell development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=CL:0000125, OBO_REL:unfolds_in=cdef(MA:0000217, [OBO_REL:part_of=ZFA:0001469])]) [-4] ! parse: GO:0048937 using "lateral line nerve glial cell development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=FBbt:00005144, OBO_REL:unfolds_in=ZFA:0001479]) [-3] ! parse: GO:0048937 using "lateral line nerve glial cell development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=FBbt:00005144, OBO_REL:unfolds_in=cdef(FBbt:00005105, [OBO_REL:part_of=ZFA:0001469])]) [-4] ! parse: GO:0048937 using "lateral line nerve glial cell development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=FBbt:00005144, OBO_REL:unfolds_in=cdef(MA:0000217, [OBO_REL:part_of=ZFA:0001469])]) [-4] ! parse: GO:0048937 using "lateral line nerve glial cell development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=ZFA:0009073, OBO_REL:unfolds_in=ZFA:0001479]) [-3] ! parse: GO:0048937 using "lateral line nerve glial cell development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=ZFA:0009073, OBO_REL:unfolds_in=cdef(FBbt:00005105, [OBO_REL:part_of=ZFA:0001469])]) [-4] ! parse: GO:0048937 using "lateral line nerve glial cell development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=ZFA:0009073, OBO_REL:unfolds_in=cdef(MA:0000217, [OBO_REL:part_of=ZFA:0001469])]) [-4] ! parse: GO:0048937 using "lateral line nerve glial cell development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=cdef(FBbt:00005144, [OBO_REL:part_of=FBbt:00005105]), OBO_REL:unfolds_in=ZFA:0001469]) [-4] ! parse: GO:0048937 using "lateral line nerve glial cell development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=cdef(FBbt:00005144, [OBO_REL:part_of=MA:0000217]), OBO_REL:unfolds_in=ZFA:0001469]) [-4] ! parse: GO:0048937 using "lateral line nerve glial cell development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=cdef(ZFA:0009073, [OBO_REL:part_of=FBbt:00005105]), OBO_REL:unfolds_in=ZFA:0001469]) [-4] ! parse: GO:0048937 using "lateral line nerve glial cell development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=cdef(ZFA:0009073, [OBO_REL:part_of=MA:0000217]), OBO_REL:unfolds_in=ZFA:0001469]) [-4] ! parse: GO:0048937 using "lateral line nerve glial cell development" => cdef(GO:0032502, [and=results_in_complete_developmental_of(CL:0000125)/unfolds_in(FBbt:00005105), OBO_REL:unfolds_in=ZFA:0001469]) [-3] ! parse: GO:0048937 using "lateral line nerve glial cell development" => cdef(GO:0032502, [and=results_in_complete_developmental_of(CL:0000125)/unfolds_in(MA:0000217), OBO_REL:unfolds_in=ZFA:0001469]) [-3] ! parse: GO:0048937 using "lateral line nerve glial cell development" => cdef(GO:0032502, [and=results_in_complete_developmental_of(FBbt:00005144)/unfolds_in(FBbt:00005105), OBO_REL:unfolds_in=ZFA:0001469]) [-3] ! parse: GO:0048937 using "lateral line nerve glial cell development" => cdef(GO:0032502, [and=results_in_complete_developmental_of(FBbt:00005144)/unfolds_in(MA:0000217), OBO_REL:unfolds_in=ZFA:0001469]) [-3] ! parse: GO:0048937 using "lateral line nerve glial cell development" => cdef(GO:0032502, [and=results_in_complete_developmental_of(ZFA:0009073)/unfolds_in(FBbt:00005105), OBO_REL:unfolds_in=ZFA:0001469]) [-3] ! parse: GO:0048937 using "lateral line nerve glial cell development" => cdef(GO:0032502, [and=results_in_complete_developmental_of(ZFA:0009073)/unfolds_in(MA:0000217), OBO_REL:unfolds_in=ZFA:0001469]) [-3] ! parse: GO:0048937 using "lateral line nerve glial cell development" => cdef(GO:0032502, [and=results_in_developmental_progression_of(CL:0000125)/unfolds_in(FBbt:00005105), OBO_REL:unfolds_in=ZFA:0001469]) [-3] ! parse: GO:0048937 using "lateral line nerve glial cell development" => cdef(GO:0032502, [and=results_in_developmental_progression_of(CL:0000125)/unfolds_in(MA:0000217), OBO_REL:unfolds_in=ZFA:0001469]) [-3] ! parse: GO:0048937 using "lateral line nerve glial cell development" => cdef(GO:0032502, [and=results_in_developmental_progression_of(FBbt:00005144)/unfolds_in(FBbt:00005105), OBO_REL:unfolds_in=ZFA:0001469]) [-3] ! parse: GO:0048937 using "lateral line nerve glial cell development" => cdef(GO:0032502, [and=results_in_developmental_progression_of(FBbt:00005144)/unfolds_in(MA:0000217), OBO_REL:unfolds_in=ZFA:0001469]) [-3] ! parse: GO:0048937 using "lateral line nerve glial cell development" => cdef(GO:0032502, [and=results_in_developmental_progression_of(ZFA:0009073)/unfolds_in(FBbt:00005105), OBO_REL:unfolds_in=ZFA:0001469]) [-3] ! parse: GO:0048937 using "lateral line nerve glial cell development" => cdef(GO:0032502, [and=results_in_developmental_progression_of(ZFA:0009073)/unfolds_in(MA:0000217), OBO_REL:unfolds_in=ZFA:0001469]) [-3] ! parse: GO:0048937 using "lateral line nerve glial cell development" => cdef(GO:0032502, [results_in_complete_developmental_of=CL:0000125, OBO_REL:unfolds_in=ZFA:0001479]) [-3] ! parse: GO:0048937 using "lateral line nerve glial cell development" => cdef(GO:0032502, [results_in_complete_developmental_of=CL:0000125, OBO_REL:unfolds_in=cdef(FBbt:00005105, [OBO_REL:part_of=ZFA:0001469])]) [-4] ! parse: GO:0048937 using "lateral line nerve glial cell development" => cdef(GO:0032502, [results_in_complete_developmental_of=CL:0000125, OBO_REL:unfolds_in=cdef(MA:0000217, [OBO_REL:part_of=ZFA:0001469])]) [-4] ! parse: GO:0048937 using "lateral line nerve glial cell development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00005144, OBO_REL:unfolds_in=ZFA:0001479]) [-3] ! parse: GO:0048937 using "lateral line nerve glial cell development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00005144, OBO_REL:unfolds_in=cdef(FBbt:00005105, [OBO_REL:part_of=ZFA:0001469])]) [-4] ! parse: GO:0048937 using "lateral line nerve glial cell development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00005144, OBO_REL:unfolds_in=cdef(MA:0000217, [OBO_REL:part_of=ZFA:0001469])]) [-4] ! parse: GO:0048937 using "lateral line nerve glial cell development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0009073, OBO_REL:unfolds_in=ZFA:0001479]) [-3] ! parse: GO:0048937 using "lateral line nerve glial cell development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0009073, OBO_REL:unfolds_in=cdef(FBbt:00005105, [OBO_REL:part_of=ZFA:0001469])]) [-4] ! parse: GO:0048937 using "lateral line nerve glial cell development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0009073, OBO_REL:unfolds_in=cdef(MA:0000217, [OBO_REL:part_of=ZFA:0001469])]) [-4] ! parse: GO:0048937 using "lateral line nerve glial cell development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(FBbt:00005144, [OBO_REL:part_of=FBbt:00005105]), OBO_REL:unfolds_in=ZFA:0001469]) [-4] ! parse: GO:0048937 using "lateral line nerve glial cell development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(FBbt:00005144, [OBO_REL:part_of=MA:0000217]), OBO_REL:unfolds_in=ZFA:0001469]) [-4] ! parse: GO:0048937 using "lateral line nerve glial cell development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(FBbt:00005144, [OBO_REL:part_of=ZFA:0001479])]) [-3] ! parse: GO:0048937 using "lateral line nerve glial cell development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(ZFA:0009073, [OBO_REL:part_of=FBbt:00005105]), OBO_REL:unfolds_in=ZFA:0001469]) [-4] ! parse: GO:0048937 using "lateral line nerve glial cell development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(ZFA:0009073, [OBO_REL:part_of=MA:0000217]), OBO_REL:unfolds_in=ZFA:0001469]) [-4] ! parse: GO:0048937 using "lateral line nerve glial cell development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(ZFA:0009073, [OBO_REL:part_of=ZFA:0001479])]) [-3] ! parse: GO:0048937 using "lateral line nerve glial cell development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(cdef(FBbt:00005144, [OBO_REL:part_of=FBbt:00005105]), [OBO_REL:part_of=ZFA:0001469])]) [-4] ! parse: GO:0048937 using "lateral line nerve glial cell development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(cdef(FBbt:00005144, [OBO_REL:part_of=MA:0000217]), [OBO_REL:part_of=ZFA:0001469])]) [-4] ! parse: GO:0048937 using "lateral line nerve glial cell development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(cdef(ZFA:0009073, [OBO_REL:part_of=FBbt:00005105]), [OBO_REL:part_of=ZFA:0001469])]) [-4] ! parse: GO:0048937 using "lateral line nerve glial cell development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(cdef(ZFA:0009073, [OBO_REL:part_of=MA:0000217]), [OBO_REL:part_of=ZFA:0001469])]) [-4] ! no existing xp def ! def: "The process aimed at the progression of a lateral line glial cell over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell." ! PROPOSED: developmental process that results_in_complete_developmental_of cdef(ZFA:0009073, [OBO_REL:part_of=ZFA:0001479]) [cdef(GO:0032502, [results_in_complete_developmental_of=cdef(ZFA:0009073, [OBO_REL:part_of=ZFA:0001479])])] [Term] id: GO:0048937 ! lateral line nerve glial cell development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of lateral_line_nerve_glial_cell synonym: "glial cell of lateral line nerve development" EXACT [OBOL:automatic] synonym: "glial cell of the lateral line nerve development" EXACT [OBOL:automatic] synonym: "neuroglia of lateral line nerve development" EXACT [OBOL:automatic] synonym: "neuroglia of the lateral line nerve development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0048937: 36.15 ! parse: GO:0048938 using "lateral line nerve glial cell morphogenesis during differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(lateral line nerve glial cell morphogenesis during, cell)]) [-51] ! parse: GO:0048938 using "lateral line nerve glial cell morphogenesis during differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(morphogenesis during, cell), OBO_REL:unfolds_in=cdef(FBbt:00005144, [OBO_REL:part_of=ZFA:0001479])]) [-23] ! parse: GO:0048938 using "lateral line nerve glial cell morphogenesis during differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(morphogenesis during, cell), OBO_REL:unfolds_in=cdef(ZFA:0009073, [OBO_REL:part_of=ZFA:0001479])]) [-23] ! parse: GO:0048938 using "lateral line nerve glial cell morphogenesis during differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(morphogenesis during, cell), OBO_REL:unfolds_in=cdef(cdef(FBbt:00005144, [OBO_REL:part_of=FBbt:00005105]), [OBO_REL:part_of=ZFA:0001469])]) [-24] ! parse: GO:0048938 using "lateral line nerve glial cell morphogenesis during differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(morphogenesis during, cell), OBO_REL:unfolds_in=cdef(cdef(FBbt:00005144, [OBO_REL:part_of=MA:0000217]), [OBO_REL:part_of=ZFA:0001469])]) [-24] ! parse: GO:0048938 using "lateral line nerve glial cell morphogenesis during differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(morphogenesis during, cell), OBO_REL:unfolds_in=cdef(cdef(ZFA:0009073, [OBO_REL:part_of=FBbt:00005105]), [OBO_REL:part_of=ZFA:0001469])]) [-24] ! parse: GO:0048938 using "lateral line nerve glial cell morphogenesis during differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(morphogenesis during, cell), OBO_REL:unfolds_in=cdef(cdef(ZFA:0009073, [OBO_REL:part_of=MA:0000217]), [OBO_REL:part_of=ZFA:0001469])]) [-24] ! parse: GO:0048938 using "lateral line nerve glial cell morphogenesis during differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(nerve glial cell morphogenesis during, cell), OBO_REL:unfolds_in=ZFA:0001469]) [-39] ! parse: GO:0048938 using "lateral line nerve glial cell morphogenesis during differentiation" => cdef(GO:0030154, [and=results_in_acquisition_of_features_of(anon(morphogenesis during, cell))/unfolds_in(CL:0000125), OBO_REL:unfolds_in=ZFA:0001479]) [-3] ! parse: GO:0048938 using "lateral line nerve glial cell morphogenesis during differentiation" => cdef(GO:0030154, [and=results_in_acquisition_of_features_of(anon(morphogenesis during, cell))/unfolds_in(CL:0000125), OBO_REL:unfolds_in=cdef(FBbt:00005105, [OBO_REL:part_of=ZFA:0001469])]) [-4] ! parse: GO:0048938 using "lateral line nerve glial cell morphogenesis during differentiation" => cdef(GO:0030154, [and=results_in_acquisition_of_features_of(anon(morphogenesis during, cell))/unfolds_in(CL:0000125), OBO_REL:unfolds_in=cdef(MA:0000217, [OBO_REL:part_of=ZFA:0001469])]) [-4] ! parse: GO:0048938 using "lateral line nerve glial cell morphogenesis during differentiation" => cdef(GO:0030154, [and=results_in_acquisition_of_features_of(anon(morphogenesis during, cell))/unfolds_in(FBbt:00005144), OBO_REL:unfolds_in=ZFA:0001479]) [-3] ! parse: GO:0048938 using "lateral line nerve glial cell morphogenesis during differentiation" => cdef(GO:0030154, [and=results_in_acquisition_of_features_of(anon(morphogenesis during, cell))/unfolds_in(FBbt:00005144), OBO_REL:unfolds_in=cdef(FBbt:00005105, [OBO_REL:part_of=ZFA:0001469])]) [-4] ! parse: GO:0048938 using "lateral line nerve glial cell morphogenesis during differentiation" => cdef(GO:0030154, [and=results_in_acquisition_of_features_of(anon(morphogenesis during, cell))/unfolds_in(FBbt:00005144), OBO_REL:unfolds_in=cdef(MA:0000217, [OBO_REL:part_of=ZFA:0001469])]) [-4] ! parse: GO:0048938 using "lateral line nerve glial cell morphogenesis during differentiation" => cdef(GO:0030154, [and=results_in_acquisition_of_features_of(anon(morphogenesis during, cell))/unfolds_in(ZFA:0009073), OBO_REL:unfolds_in=ZFA:0001479]) [-3] ! parse: GO:0048938 using "lateral line nerve glial cell morphogenesis during differentiation" => cdef(GO:0030154, [and=results_in_acquisition_of_features_of(anon(morphogenesis during, cell))/unfolds_in(ZFA:0009073), OBO_REL:unfolds_in=cdef(FBbt:00005105, [OBO_REL:part_of=ZFA:0001469])]) [-4] ! parse: GO:0048938 using "lateral line nerve glial cell morphogenesis during differentiation" => cdef(GO:0030154, [and=results_in_acquisition_of_features_of(anon(morphogenesis during, cell))/unfolds_in(ZFA:0009073), OBO_REL:unfolds_in=cdef(MA:0000217, [OBO_REL:part_of=ZFA:0001469])]) [-4] ! parse: GO:0048938 using "lateral line nerve glial cell morphogenesis during differentiation" => cdef(GO:0030154, [and=results_in_acquisition_of_features_of(anon(morphogenesis during, cell))/unfolds_in(that(FBbt:00005144, part_of(FBbt:00005105))), OBO_REL:unfolds_in=ZFA:0001469]) [-3] ! parse: GO:0048938 using "lateral line nerve glial cell morphogenesis during differentiation" => cdef(GO:0030154, [and=results_in_acquisition_of_features_of(anon(morphogenesis during, cell))/unfolds_in(that(FBbt:00005144, part_of(MA:0000217))), OBO_REL:unfolds_in=ZFA:0001469]) [-3] ! parse: GO:0048938 using "lateral line nerve glial cell morphogenesis during differentiation" => cdef(GO:0030154, [and=results_in_acquisition_of_features_of(anon(morphogenesis during, cell))/unfolds_in(that(ZFA:0009073, part_of(FBbt:00005105))), OBO_REL:unfolds_in=ZFA:0001469]) [-3] ! parse: GO:0048938 using "lateral line nerve glial cell morphogenesis during differentiation" => cdef(GO:0030154, [and=results_in_acquisition_of_features_of(anon(morphogenesis during, cell))/unfolds_in(that(ZFA:0009073, part_of(MA:0000217))), OBO_REL:unfolds_in=ZFA:0001469]) [-3] ! parse: GO:0048938 using "lateral line nerve glial cell morphogenesis during differentiation" => cdef(GO:0030154, [and=and(results_in_acquisition_of_features_of(anon(morphogenesis during, cell)), unfolds_in(CL:0000125))/unfolds_in(FBbt:00005105), OBO_REL:unfolds_in=ZFA:0001469]) [-3] ! parse: GO:0048938 using "lateral line nerve glial cell morphogenesis during differentiation" => cdef(GO:0030154, [and=and(results_in_acquisition_of_features_of(anon(morphogenesis during, cell)), unfolds_in(CL:0000125))/unfolds_in(MA:0000217), OBO_REL:unfolds_in=ZFA:0001469]) [-3] ! parse: GO:0048938 using "lateral line nerve glial cell morphogenesis during differentiation" => cdef(GO:0030154, [and=and(results_in_acquisition_of_features_of(anon(morphogenesis during, cell)), unfolds_in(FBbt:00005144))/unfolds_in(FBbt:00005105), OBO_REL:unfolds_in=ZFA:0001469]) [-3] ! parse: GO:0048938 using "lateral line nerve glial cell morphogenesis during differentiation" => cdef(GO:0030154, [and=and(results_in_acquisition_of_features_of(anon(morphogenesis during, cell)), unfolds_in(FBbt:00005144))/unfolds_in(MA:0000217), OBO_REL:unfolds_in=ZFA:0001469]) [-3] ! parse: GO:0048938 using "lateral line nerve glial cell morphogenesis during differentiation" => cdef(GO:0030154, [and=and(results_in_acquisition_of_features_of(anon(morphogenesis during, cell)), unfolds_in(ZFA:0009073))/unfolds_in(FBbt:00005105), OBO_REL:unfolds_in=ZFA:0001469]) [-3] ! parse: GO:0048938 using "lateral line nerve glial cell morphogenesis during differentiation" => cdef(GO:0030154, [and=and(results_in_acquisition_of_features_of(anon(morphogenesis during, cell)), unfolds_in(ZFA:0009073))/unfolds_in(MA:0000217), OBO_REL:unfolds_in=ZFA:0001469]) [-3] ! no existing xp def ! def: "The process by which the structure of a glial cell in a lateral line nerve is generated and organized. This process occurs while the initally relatively unspecialized cell is acquiring the specialized features of a glial cell in a lateral line nerve." ! PROPOSED: cell differentiation that and and(results_in_acquisition_of_features_of(anon(morphogenesis during, cell)), unfolds_in(ZFA:0009073))/unfolds_in(MA:0000217) and OBO_REL:unfolds_in lateral line [cdef(GO:0030154, [and=and(results_in_acquisition_of_features_of(anon(morphogenesis during, cell)), unfolds_in(ZFA:0009073))/unfolds_in(MA:0000217), OBO_REL:unfolds_in=ZFA:0001469])] [Term] id: GO:0048938 ! lateral line nerve glial cell morphogenesis during differentiation intersection_of: GO:0030154 ! cell differentiation intersection_of: and and(results_in_acquisition_of_features_of(anon(morphogenesis during, cell)), unfolds_in(ZFA:0009073))/unfolds_in(MA:0000217) intersection_of: OBO_REL:unfolds_in ZFA:0001469 ! lateral line ! seconds spent parsing GO:0048938: 36.21 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0048939 using "anterior lateral line nerve glial cell development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=CL:0000125, OBO_REL:unfolds_in=ZFA:0000425]) [-3] ! parse: GO:0048939 using "anterior lateral line nerve glial cell development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=CL:0000125, OBO_REL:unfolds_in=cell:anterior_lateral_line_nerve]) [-3] ! parse: GO:0048939 using "anterior lateral line nerve glial cell development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=CL:0000125, OBO_REL:unfolds_in=cdef(FBbt:00005105, [OBO_REL:part_of=ZFA:0001470])]) [-4] ! parse: GO:0048939 using "anterior lateral line nerve glial cell development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=CL:0000125, OBO_REL:unfolds_in=cdef(MA:0000217, [OBO_REL:part_of=ZFA:0001470])]) [-4] ! parse: GO:0048939 using "anterior lateral line nerve glial cell development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=FBbt:00005144, OBO_REL:unfolds_in=ZFA:0000425]) [-3] ! parse: GO:0048939 using "anterior lateral line nerve glial cell development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=FBbt:00005144, OBO_REL:unfolds_in=cell:anterior_lateral_line_nerve]) [-3] ! parse: GO:0048939 using "anterior lateral line nerve glial cell development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=FBbt:00005144, OBO_REL:unfolds_in=cdef(FBbt:00005105, [OBO_REL:part_of=ZFA:0001470])]) [-4] ! parse: GO:0048939 using "anterior lateral line nerve glial cell development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=FBbt:00005144, OBO_REL:unfolds_in=cdef(MA:0000217, [OBO_REL:part_of=ZFA:0001470])]) [-4] ! parse: GO:0048939 using "anterior lateral line nerve glial cell development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=ZFA:0009073, OBO_REL:unfolds_in=ZFA:0000425]) [-3] ! parse: GO:0048939 using "anterior lateral line nerve glial cell development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=ZFA:0009073, OBO_REL:unfolds_in=cell:anterior_lateral_line_nerve]) [-3] ! parse: GO:0048939 using "anterior lateral line nerve glial cell development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=ZFA:0009073, OBO_REL:unfolds_in=cdef(FBbt:00005105, [OBO_REL:part_of=ZFA:0001470])]) [-4] ! parse: GO:0048939 using "anterior lateral line nerve glial cell development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=ZFA:0009073, OBO_REL:unfolds_in=cdef(MA:0000217, [OBO_REL:part_of=ZFA:0001470])]) [-4] ! parse: GO:0048939 using "anterior lateral line nerve glial cell development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=cdef(FBbt:00005144, [OBO_REL:part_of=FBbt:00005105]), OBO_REL:unfolds_in=ZFA:0001470]) [-4] ! parse: GO:0048939 using "anterior lateral line nerve glial cell development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=cdef(FBbt:00005144, [OBO_REL:part_of=MA:0000217]), OBO_REL:unfolds_in=ZFA:0001470]) [-4] ! parse: GO:0048939 using "anterior lateral line nerve glial cell development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=cdef(ZFA:0009073, [OBO_REL:part_of=FBbt:00005105]), OBO_REL:unfolds_in=ZFA:0001470]) [-4] ! parse: GO:0048939 using "anterior lateral line nerve glial cell development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=cdef(ZFA:0009073, [OBO_REL:part_of=MA:0000217]), OBO_REL:unfolds_in=ZFA:0001470]) [-4] ! parse: GO:0048939 using "anterior lateral line nerve glial cell development" => cdef(GO:0032502, [and=results_in_complete_developmental_of(CL:0000125)/unfolds_in(FBbt:00005105), OBO_REL:unfolds_in=ZFA:0001470]) [-3] ! parse: GO:0048939 using "anterior lateral line nerve glial cell development" => cdef(GO:0032502, [and=results_in_complete_developmental_of(CL:0000125)/unfolds_in(MA:0000217), OBO_REL:unfolds_in=ZFA:0001470]) [-3] ! parse: GO:0048939 using "anterior lateral line nerve glial cell development" => cdef(GO:0032502, [and=results_in_complete_developmental_of(FBbt:00005144)/unfolds_in(FBbt:00005105), OBO_REL:unfolds_in=ZFA:0001470]) [-3] ! parse: GO:0048939 using "anterior lateral line nerve glial cell development" => cdef(GO:0032502, [and=results_in_complete_developmental_of(FBbt:00005144)/unfolds_in(MA:0000217), OBO_REL:unfolds_in=ZFA:0001470]) [-3] ! parse: GO:0048939 using "anterior lateral line nerve glial cell development" => cdef(GO:0032502, [and=results_in_complete_developmental_of(ZFA:0009073)/unfolds_in(FBbt:00005105), OBO_REL:unfolds_in=ZFA:0001470]) [-3] ! parse: GO:0048939 using "anterior lateral line nerve glial cell development" => cdef(GO:0032502, [and=results_in_complete_developmental_of(ZFA:0009073)/unfolds_in(MA:0000217), OBO_REL:unfolds_in=ZFA:0001470]) [-3] ! parse: GO:0048939 using "anterior lateral line nerve glial cell development" => cdef(GO:0032502, [and=results_in_developmental_progression_of(CL:0000125)/unfolds_in(FBbt:00005105), OBO_REL:unfolds_in=ZFA:0001470]) [-3] ! parse: GO:0048939 using "anterior lateral line nerve glial cell development" => cdef(GO:0032502, [and=results_in_developmental_progression_of(CL:0000125)/unfolds_in(MA:0000217), OBO_REL:unfolds_in=ZFA:0001470]) [-3] ! parse: GO:0048939 using "anterior lateral line nerve glial cell development" => cdef(GO:0032502, [and=results_in_developmental_progression_of(FBbt:00005144)/unfolds_in(FBbt:00005105), OBO_REL:unfolds_in=ZFA:0001470]) [-3] ! parse: GO:0048939 using "anterior lateral line nerve glial cell development" => cdef(GO:0032502, [and=results_in_developmental_progression_of(FBbt:00005144)/unfolds_in(MA:0000217), OBO_REL:unfolds_in=ZFA:0001470]) [-3] ! parse: GO:0048939 using "anterior lateral line nerve glial cell development" => cdef(GO:0032502, [and=results_in_developmental_progression_of(ZFA:0009073)/unfolds_in(FBbt:00005105), OBO_REL:unfolds_in=ZFA:0001470]) [-3] ! parse: GO:0048939 using "anterior lateral line nerve glial cell development" => cdef(GO:0032502, [and=results_in_developmental_progression_of(ZFA:0009073)/unfolds_in(MA:0000217), OBO_REL:unfolds_in=ZFA:0001470]) [-3] ! parse: GO:0048939 using "anterior lateral line nerve glial cell development" => cdef(GO:0032502, [results_in_complete_developmental_of=CL:0000125, OBO_REL:unfolds_in=ZFA:0000425]) [-3] ! parse: GO:0048939 using "anterior lateral line nerve glial cell development" => cdef(GO:0032502, [results_in_complete_developmental_of=CL:0000125, OBO_REL:unfolds_in=cell:anterior_lateral_line_nerve]) [-3] ! parse: GO:0048939 using "anterior lateral line nerve glial cell development" => cdef(GO:0032502, [results_in_complete_developmental_of=CL:0000125, OBO_REL:unfolds_in=cdef(FBbt:00005105, [OBO_REL:part_of=ZFA:0001470])]) [-4] ! parse: GO:0048939 using "anterior lateral line nerve glial cell development" => cdef(GO:0032502, [results_in_complete_developmental_of=CL:0000125, OBO_REL:unfolds_in=cdef(MA:0000217, [OBO_REL:part_of=ZFA:0001470])]) [-4] ! parse: GO:0048939 using "anterior lateral line nerve glial cell development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00005144, OBO_REL:unfolds_in=ZFA:0000425]) [-3] ! parse: GO:0048939 using "anterior lateral line nerve glial cell development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00005144, OBO_REL:unfolds_in=cell:anterior_lateral_line_nerve]) [-3] ! parse: GO:0048939 using "anterior lateral line nerve glial cell development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00005144, OBO_REL:unfolds_in=cdef(FBbt:00005105, [OBO_REL:part_of=ZFA:0001470])]) [-4] ! parse: GO:0048939 using "anterior lateral line nerve glial cell development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00005144, OBO_REL:unfolds_in=cdef(MA:0000217, [OBO_REL:part_of=ZFA:0001470])]) [-4] ! parse: GO:0048939 using "anterior lateral line nerve glial cell development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0009073, OBO_REL:unfolds_in=ZFA:0000425]) [-3] ! parse: GO:0048939 using "anterior lateral line nerve glial cell development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0009073, OBO_REL:unfolds_in=cell:anterior_lateral_line_nerve]) [-3] ! parse: GO:0048939 using "anterior lateral line nerve glial cell development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0009073, OBO_REL:unfolds_in=cdef(FBbt:00005105, [OBO_REL:part_of=ZFA:0001470])]) [-4] ! parse: GO:0048939 using "anterior lateral line nerve glial cell development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0009073, OBO_REL:unfolds_in=cdef(MA:0000217, [OBO_REL:part_of=ZFA:0001470])]) [-4] ! parse: GO:0048939 using "anterior lateral line nerve glial cell development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(FBbt:00005144, [OBO_REL:part_of=FBbt:00005105]), OBO_REL:unfolds_in=ZFA:0001470]) [-4] ! parse: GO:0048939 using "anterior lateral line nerve glial cell development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(FBbt:00005144, [OBO_REL:part_of=MA:0000217]), OBO_REL:unfolds_in=ZFA:0001470]) [-4] ! parse: GO:0048939 using "anterior lateral line nerve glial cell development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(FBbt:00005144, [OBO_REL:part_of=ZFA:0000425])]) [-3] ! parse: GO:0048939 using "anterior lateral line nerve glial cell development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(ZFA:0009073, [OBO_REL:part_of=FBbt:00005105]), OBO_REL:unfolds_in=ZFA:0001470]) [-4] ! parse: GO:0048939 using "anterior lateral line nerve glial cell development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(ZFA:0009073, [OBO_REL:part_of=MA:0000217]), OBO_REL:unfolds_in=ZFA:0001470]) [-4] ! parse: GO:0048939 using "anterior lateral line nerve glial cell development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(ZFA:0009073, [OBO_REL:part_of=ZFA:0000425])]) [-3] ! parse: GO:0048939 using "anterior lateral line nerve glial cell development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(cdef(FBbt:00005144, [OBO_REL:part_of=FBbt:00005105]), [OBO_REL:part_of=ZFA:0001470])]) [-4] ! parse: GO:0048939 using "anterior lateral line nerve glial cell development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(cdef(FBbt:00005144, [OBO_REL:part_of=MA:0000217]), [OBO_REL:part_of=ZFA:0001470])]) [-4] ! parse: GO:0048939 using "anterior lateral line nerve glial cell development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(cdef(ZFA:0009073, [OBO_REL:part_of=FBbt:00005105]), [OBO_REL:part_of=ZFA:0001470])]) [-4] ! parse: GO:0048939 using "anterior lateral line nerve glial cell development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(cdef(ZFA:0009073, [OBO_REL:part_of=MA:0000217]), [OBO_REL:part_of=ZFA:0001470])]) [-4] ! no existing xp def ! def: "The process aimed at the progression of a glial cell in the anterior lateral line nerve over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell." ! PROPOSED: developmental process that results_in_complete_developmental_of cdef(ZFA:0009073, [OBO_REL:part_of=ZFA:0000425]) [cdef(GO:0032502, [results_in_complete_developmental_of=cdef(ZFA:0009073, [OBO_REL:part_of=ZFA:0000425])])] [Term] id: GO:0048939 ! anterior lateral line nerve glial cell development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of anterior_lateral_line_nerve_glial_cell synonym: "glial cell of anterior lateral line nerve development" EXACT [OBOL:automatic] synonym: "glial cell of rostral lateral line nerve development" EXACT [OBOL:automatic] synonym: "glial cell of the anterior lateral line nerve development" EXACT [OBOL:automatic] synonym: "glial cell of the rostral lateral line nerve development" EXACT [OBOL:automatic] synonym: "neuroglia of anterior lateral line nerve development" EXACT [OBOL:automatic] synonym: "neuroglia of rostral lateral line nerve development" EXACT [OBOL:automatic] synonym: "neuroglia of the anterior lateral line nerve development" EXACT [OBOL:automatic] synonym: "neuroglia of the rostral lateral line nerve development" EXACT [OBOL:automatic] synonym: "rostral lateral line nerve glial cell development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0048939: 23.2 ! parse: GO:0048940 using "anterior lateral line nerve glial cell morphogenesis during differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(morphogenesis during, cell), OBO_REL:unfolds_in=cdef(FBbt:00005144, [OBO_REL:part_of=ZFA:0000425])]) [-23] ! parse: GO:0048940 using "anterior lateral line nerve glial cell morphogenesis during differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(morphogenesis during, cell), OBO_REL:unfolds_in=cdef(ZFA:0009073, [OBO_REL:part_of=ZFA:0000425])]) [-23] ! parse: GO:0048940 using "anterior lateral line nerve glial cell morphogenesis during differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(morphogenesis during, cell), OBO_REL:unfolds_in=cdef(cdef(FBbt:00005144, [OBO_REL:part_of=FBbt:00005105]), [OBO_REL:part_of=ZFA:0001470])]) [-24] ! parse: GO:0048940 using "anterior lateral line nerve glial cell morphogenesis during differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(morphogenesis during, cell), OBO_REL:unfolds_in=cdef(cdef(FBbt:00005144, [OBO_REL:part_of=MA:0000217]), [OBO_REL:part_of=ZFA:0001470])]) [-24] ! parse: GO:0048940 using "anterior lateral line nerve glial cell morphogenesis during differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(morphogenesis during, cell), OBO_REL:unfolds_in=cdef(cdef(ZFA:0009073, [OBO_REL:part_of=FBbt:00005105]), [OBO_REL:part_of=ZFA:0001470])]) [-24] ! parse: GO:0048940 using "anterior lateral line nerve glial cell morphogenesis during differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(morphogenesis during, cell), OBO_REL:unfolds_in=cdef(cdef(ZFA:0009073, [OBO_REL:part_of=MA:0000217]), [OBO_REL:part_of=ZFA:0001470])]) [-24] ! parse: GO:0048940 using "anterior lateral line nerve glial cell morphogenesis during differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(nerve glial cell morphogenesis during, cell), OBO_REL:unfolds_in=ZFA:0001470]) [-39] ! parse: GO:0048940 using "anterior lateral line nerve glial cell morphogenesis during differentiation" => cdef(GO:0030154, [and=results_in_acquisition_of_features_of(anon(morphogenesis during, cell))/unfolds_in(CL:0000125), OBO_REL:unfolds_in=ZFA:0000425]) [-3] ! parse: GO:0048940 using "anterior lateral line nerve glial cell morphogenesis during differentiation" => cdef(GO:0030154, [and=results_in_acquisition_of_features_of(anon(morphogenesis during, cell))/unfolds_in(CL:0000125), OBO_REL:unfolds_in=cell:anterior_lateral_line_nerve]) [-3] ! parse: GO:0048940 using "anterior lateral line nerve glial cell morphogenesis during differentiation" => cdef(GO:0030154, [and=results_in_acquisition_of_features_of(anon(morphogenesis during, cell))/unfolds_in(CL:0000125), OBO_REL:unfolds_in=cdef(FBbt:00005105, [OBO_REL:part_of=ZFA:0001470])]) [-4] ! parse: GO:0048940 using "anterior lateral line nerve glial cell morphogenesis during differentiation" => cdef(GO:0030154, [and=results_in_acquisition_of_features_of(anon(morphogenesis during, cell))/unfolds_in(CL:0000125), OBO_REL:unfolds_in=cdef(MA:0000217, [OBO_REL:part_of=ZFA:0001470])]) [-4] ! parse: GO:0048940 using "anterior lateral line nerve glial cell morphogenesis during differentiation" => cdef(GO:0030154, [and=results_in_acquisition_of_features_of(anon(morphogenesis during, cell))/unfolds_in(FBbt:00005144), OBO_REL:unfolds_in=ZFA:0000425]) [-3] ! parse: GO:0048940 using "anterior lateral line nerve glial cell morphogenesis during differentiation" => cdef(GO:0030154, [and=results_in_acquisition_of_features_of(anon(morphogenesis during, cell))/unfolds_in(FBbt:00005144), OBO_REL:unfolds_in=cell:anterior_lateral_line_nerve]) [-3] ! parse: GO:0048940 using "anterior lateral line nerve glial cell morphogenesis during differentiation" => cdef(GO:0030154, [and=results_in_acquisition_of_features_of(anon(morphogenesis during, cell))/unfolds_in(FBbt:00005144), OBO_REL:unfolds_in=cdef(FBbt:00005105, [OBO_REL:part_of=ZFA:0001470])]) [-4] ! parse: GO:0048940 using "anterior lateral line nerve glial cell morphogenesis during differentiation" => cdef(GO:0030154, [and=results_in_acquisition_of_features_of(anon(morphogenesis during, cell))/unfolds_in(FBbt:00005144), OBO_REL:unfolds_in=cdef(MA:0000217, [OBO_REL:part_of=ZFA:0001470])]) [-4] ! parse: GO:0048940 using "anterior lateral line nerve glial cell morphogenesis during differentiation" => cdef(GO:0030154, [and=results_in_acquisition_of_features_of(anon(morphogenesis during, cell))/unfolds_in(ZFA:0009073), OBO_REL:unfolds_in=ZFA:0000425]) [-3] ! parse: GO:0048940 using "anterior lateral line nerve glial cell morphogenesis during differentiation" => cdef(GO:0030154, [and=results_in_acquisition_of_features_of(anon(morphogenesis during, cell))/unfolds_in(ZFA:0009073), OBO_REL:unfolds_in=cell:anterior_lateral_line_nerve]) [-3] ! parse: GO:0048940 using "anterior lateral line nerve glial cell morphogenesis during differentiation" => cdef(GO:0030154, [and=results_in_acquisition_of_features_of(anon(morphogenesis during, cell))/unfolds_in(ZFA:0009073), OBO_REL:unfolds_in=cdef(FBbt:00005105, [OBO_REL:part_of=ZFA:0001470])]) [-4] ! parse: GO:0048940 using "anterior lateral line nerve glial cell morphogenesis during differentiation" => cdef(GO:0030154, [and=results_in_acquisition_of_features_of(anon(morphogenesis during, cell))/unfolds_in(ZFA:0009073), OBO_REL:unfolds_in=cdef(MA:0000217, [OBO_REL:part_of=ZFA:0001470])]) [-4] ! parse: GO:0048940 using "anterior lateral line nerve glial cell morphogenesis during differentiation" => cdef(GO:0030154, [and=results_in_acquisition_of_features_of(anon(morphogenesis during, cell))/unfolds_in(that(FBbt:00005144, part_of(FBbt:00005105))), OBO_REL:unfolds_in=ZFA:0001470]) [-3] ! parse: GO:0048940 using "anterior lateral line nerve glial cell morphogenesis during differentiation" => cdef(GO:0030154, [and=results_in_acquisition_of_features_of(anon(morphogenesis during, cell))/unfolds_in(that(FBbt:00005144, part_of(MA:0000217))), OBO_REL:unfolds_in=ZFA:0001470]) [-3] ! parse: GO:0048940 using "anterior lateral line nerve glial cell morphogenesis during differentiation" => cdef(GO:0030154, [and=results_in_acquisition_of_features_of(anon(morphogenesis during, cell))/unfolds_in(that(ZFA:0009073, part_of(FBbt:00005105))), OBO_REL:unfolds_in=ZFA:0001470]) [-3] ! parse: GO:0048940 using "anterior lateral line nerve glial cell morphogenesis during differentiation" => cdef(GO:0030154, [and=results_in_acquisition_of_features_of(anon(morphogenesis during, cell))/unfolds_in(that(ZFA:0009073, part_of(MA:0000217))), OBO_REL:unfolds_in=ZFA:0001470]) [-3] ! parse: GO:0048940 using "anterior lateral line nerve glial cell morphogenesis during differentiation" => cdef(GO:0030154, [and=and(results_in_acquisition_of_features_of(anon(morphogenesis during, cell)), unfolds_in(CL:0000125))/unfolds_in(FBbt:00005105), OBO_REL:unfolds_in=ZFA:0001470]) [-3] ! parse: GO:0048940 using "anterior lateral line nerve glial cell morphogenesis during differentiation" => cdef(GO:0030154, [and=and(results_in_acquisition_of_features_of(anon(morphogenesis during, cell)), unfolds_in(CL:0000125))/unfolds_in(MA:0000217), OBO_REL:unfolds_in=ZFA:0001470]) [-3] ! parse: GO:0048940 using "anterior lateral line nerve glial cell morphogenesis during differentiation" => cdef(GO:0030154, [and=and(results_in_acquisition_of_features_of(anon(morphogenesis during, cell)), unfolds_in(FBbt:00005144))/unfolds_in(FBbt:00005105), OBO_REL:unfolds_in=ZFA:0001470]) [-3] ! parse: GO:0048940 using "anterior lateral line nerve glial cell morphogenesis during differentiation" => cdef(GO:0030154, [and=and(results_in_acquisition_of_features_of(anon(morphogenesis during, cell)), unfolds_in(FBbt:00005144))/unfolds_in(MA:0000217), OBO_REL:unfolds_in=ZFA:0001470]) [-3] ! parse: GO:0048940 using "anterior lateral line nerve glial cell morphogenesis during differentiation" => cdef(GO:0030154, [and=and(results_in_acquisition_of_features_of(anon(morphogenesis during, cell)), unfolds_in(ZFA:0009073))/unfolds_in(FBbt:00005105), OBO_REL:unfolds_in=ZFA:0001470]) [-3] ! parse: GO:0048940 using "anterior lateral line nerve glial cell morphogenesis during differentiation" => cdef(GO:0030154, [and=and(results_in_acquisition_of_features_of(anon(morphogenesis during, cell)), unfolds_in(ZFA:0009073))/unfolds_in(MA:0000217), OBO_REL:unfolds_in=ZFA:0001470]) [-3] ! no existing xp def ! def: "The process by which the structures of a glial cell in the anterior lateral line nerve are generated and organized. This process occurs while the initally relatively unspecialized cell is acquiring the specialized features of a glial cell in the anterior lateral line nerve." ! PROPOSED: cell differentiation that and and(results_in_acquisition_of_features_of(anon(morphogenesis during, cell)), unfolds_in(ZFA:0009073))/unfolds_in(MA:0000217) and OBO_REL:unfolds_in anterior lateral line [cdef(GO:0030154, [and=and(results_in_acquisition_of_features_of(anon(morphogenesis during, cell)), unfolds_in(ZFA:0009073))/unfolds_in(MA:0000217), OBO_REL:unfolds_in=ZFA:0001470])] [Term] id: GO:0048940 ! anterior lateral line nerve glial cell morphogenesis during differentiation intersection_of: GO:0030154 ! cell differentiation intersection_of: and and(results_in_acquisition_of_features_of(anon(morphogenesis during, cell)), unfolds_in(ZFA:0009073))/unfolds_in(MA:0000217) intersection_of: OBO_REL:unfolds_in ZFA:0001470 ! anterior lateral line ! seconds spent parsing GO:0048940: 20.18 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0048941 using "posterior lateral line nerve glial cell development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=CL:0000125, OBO_REL:unfolds_in=ZFA:0000175]) [-3] ! parse: GO:0048941 using "posterior lateral line nerve glial cell development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=CL:0000125, OBO_REL:unfolds_in=cell:posterior_lateral_line_nerve]) [-3] ! parse: GO:0048941 using "posterior lateral line nerve glial cell development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=CL:0000125, OBO_REL:unfolds_in=cdef(FBbt:00005105, [OBO_REL:part_of=ZFA:0000944])]) [-4] ! parse: GO:0048941 using "posterior lateral line nerve glial cell development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=CL:0000125, OBO_REL:unfolds_in=cdef(MA:0000217, [OBO_REL:part_of=ZFA:0000944])]) [-4] ! parse: GO:0048941 using "posterior lateral line nerve glial cell development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=FBbt:00005144, OBO_REL:unfolds_in=ZFA:0000175]) [-3] ! parse: GO:0048941 using "posterior lateral line nerve glial cell development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=FBbt:00005144, OBO_REL:unfolds_in=cell:posterior_lateral_line_nerve]) [-3] ! parse: GO:0048941 using "posterior lateral line nerve glial cell development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=FBbt:00005144, OBO_REL:unfolds_in=cdef(FBbt:00005105, [OBO_REL:part_of=ZFA:0000944])]) [-4] ! parse: GO:0048941 using "posterior lateral line nerve glial cell development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=FBbt:00005144, OBO_REL:unfolds_in=cdef(MA:0000217, [OBO_REL:part_of=ZFA:0000944])]) [-4] ! parse: GO:0048941 using "posterior lateral line nerve glial cell development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=ZFA:0009073, OBO_REL:unfolds_in=ZFA:0000175]) [-3] ! parse: GO:0048941 using "posterior lateral line nerve glial cell development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=ZFA:0009073, OBO_REL:unfolds_in=cell:posterior_lateral_line_nerve]) [-3] ! parse: GO:0048941 using "posterior lateral line nerve glial cell development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=ZFA:0009073, OBO_REL:unfolds_in=cdef(FBbt:00005105, [OBO_REL:part_of=ZFA:0000944])]) [-4] ! parse: GO:0048941 using "posterior lateral line nerve glial cell development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=ZFA:0009073, OBO_REL:unfolds_in=cdef(MA:0000217, [OBO_REL:part_of=ZFA:0000944])]) [-4] ! parse: GO:0048941 using "posterior lateral line nerve glial cell development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=cdef(FBbt:00005144, [OBO_REL:part_of=FBbt:00005105]), OBO_REL:unfolds_in=ZFA:0000944]) [-4] ! parse: GO:0048941 using "posterior lateral line nerve glial cell development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=cdef(FBbt:00005144, [OBO_REL:part_of=MA:0000217]), OBO_REL:unfolds_in=ZFA:0000944]) [-4] ! parse: GO:0048941 using "posterior lateral line nerve glial cell development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=cdef(ZFA:0009073, [OBO_REL:part_of=FBbt:00005105]), OBO_REL:unfolds_in=ZFA:0000944]) [-4] ! parse: GO:0048941 using "posterior lateral line nerve glial cell development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=cdef(ZFA:0009073, [OBO_REL:part_of=MA:0000217]), OBO_REL:unfolds_in=ZFA:0000944]) [-4] ! parse: GO:0048941 using "posterior lateral line nerve glial cell development" => cdef(GO:0032502, [and=results_in_complete_developmental_of(CL:0000125)/unfolds_in(FBbt:00005105), OBO_REL:unfolds_in=ZFA:0000944]) [-3] ! parse: GO:0048941 using "posterior lateral line nerve glial cell development" => cdef(GO:0032502, [and=results_in_complete_developmental_of(CL:0000125)/unfolds_in(MA:0000217), OBO_REL:unfolds_in=ZFA:0000944]) [-3] ! parse: GO:0048941 using "posterior lateral line nerve glial cell development" => cdef(GO:0032502, [and=results_in_complete_developmental_of(FBbt:00005144)/unfolds_in(FBbt:00005105), OBO_REL:unfolds_in=ZFA:0000944]) [-3] ! parse: GO:0048941 using "posterior lateral line nerve glial cell development" => cdef(GO:0032502, [and=results_in_complete_developmental_of(FBbt:00005144)/unfolds_in(MA:0000217), OBO_REL:unfolds_in=ZFA:0000944]) [-3] ! parse: GO:0048941 using "posterior lateral line nerve glial cell development" => cdef(GO:0032502, [and=results_in_complete_developmental_of(ZFA:0009073)/unfolds_in(FBbt:00005105), OBO_REL:unfolds_in=ZFA:0000944]) [-3] ! parse: GO:0048941 using "posterior lateral line nerve glial cell development" => cdef(GO:0032502, [and=results_in_complete_developmental_of(ZFA:0009073)/unfolds_in(MA:0000217), OBO_REL:unfolds_in=ZFA:0000944]) [-3] ! parse: GO:0048941 using "posterior lateral line nerve glial cell development" => cdef(GO:0032502, [and=results_in_developmental_progression_of(CL:0000125)/unfolds_in(FBbt:00005105), OBO_REL:unfolds_in=ZFA:0000944]) [-3] ! parse: GO:0048941 using "posterior lateral line nerve glial cell development" => cdef(GO:0032502, [and=results_in_developmental_progression_of(CL:0000125)/unfolds_in(MA:0000217), OBO_REL:unfolds_in=ZFA:0000944]) [-3] ! parse: GO:0048941 using "posterior lateral line nerve glial cell development" => cdef(GO:0032502, [and=results_in_developmental_progression_of(FBbt:00005144)/unfolds_in(FBbt:00005105), OBO_REL:unfolds_in=ZFA:0000944]) [-3] ! parse: GO:0048941 using "posterior lateral line nerve glial cell development" => cdef(GO:0032502, [and=results_in_developmental_progression_of(FBbt:00005144)/unfolds_in(MA:0000217), OBO_REL:unfolds_in=ZFA:0000944]) [-3] ! parse: GO:0048941 using "posterior lateral line nerve glial cell development" => cdef(GO:0032502, [and=results_in_developmental_progression_of(ZFA:0009073)/unfolds_in(FBbt:00005105), OBO_REL:unfolds_in=ZFA:0000944]) [-3] ! parse: GO:0048941 using "posterior lateral line nerve glial cell development" => cdef(GO:0032502, [and=results_in_developmental_progression_of(ZFA:0009073)/unfolds_in(MA:0000217), OBO_REL:unfolds_in=ZFA:0000944]) [-3] ! parse: GO:0048941 using "posterior lateral line nerve glial cell development" => cdef(GO:0032502, [results_in_complete_developmental_of=CL:0000125, OBO_REL:unfolds_in=ZFA:0000175]) [-3] ! parse: GO:0048941 using "posterior lateral line nerve glial cell development" => cdef(GO:0032502, [results_in_complete_developmental_of=CL:0000125, OBO_REL:unfolds_in=cell:posterior_lateral_line_nerve]) [-3] ! parse: GO:0048941 using "posterior lateral line nerve glial cell development" => cdef(GO:0032502, [results_in_complete_developmental_of=CL:0000125, OBO_REL:unfolds_in=cdef(FBbt:00005105, [OBO_REL:part_of=ZFA:0000944])]) [-4] ! parse: GO:0048941 using "posterior lateral line nerve glial cell development" => cdef(GO:0032502, [results_in_complete_developmental_of=CL:0000125, OBO_REL:unfolds_in=cdef(MA:0000217, [OBO_REL:part_of=ZFA:0000944])]) [-4] ! parse: GO:0048941 using "posterior lateral line nerve glial cell development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00005144, OBO_REL:unfolds_in=ZFA:0000175]) [-3] ! parse: GO:0048941 using "posterior lateral line nerve glial cell development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00005144, OBO_REL:unfolds_in=cell:posterior_lateral_line_nerve]) [-3] ! parse: GO:0048941 using "posterior lateral line nerve glial cell development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00005144, OBO_REL:unfolds_in=cdef(FBbt:00005105, [OBO_REL:part_of=ZFA:0000944])]) [-4] ! parse: GO:0048941 using "posterior lateral line nerve glial cell development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00005144, OBO_REL:unfolds_in=cdef(MA:0000217, [OBO_REL:part_of=ZFA:0000944])]) [-4] ! parse: GO:0048941 using "posterior lateral line nerve glial cell development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0009073, OBO_REL:unfolds_in=ZFA:0000175]) [-3] ! parse: GO:0048941 using "posterior lateral line nerve glial cell development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0009073, OBO_REL:unfolds_in=cell:posterior_lateral_line_nerve]) [-3] ! parse: GO:0048941 using "posterior lateral line nerve glial cell development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0009073, OBO_REL:unfolds_in=cdef(FBbt:00005105, [OBO_REL:part_of=ZFA:0000944])]) [-4] ! parse: GO:0048941 using "posterior lateral line nerve glial cell development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0009073, OBO_REL:unfolds_in=cdef(MA:0000217, [OBO_REL:part_of=ZFA:0000944])]) [-4] ! parse: GO:0048941 using "posterior lateral line nerve glial cell development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(FBbt:00005144, [OBO_REL:part_of=FBbt:00005105]), OBO_REL:unfolds_in=ZFA:0000944]) [-4] ! parse: GO:0048941 using "posterior lateral line nerve glial cell development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(FBbt:00005144, [OBO_REL:part_of=MA:0000217]), OBO_REL:unfolds_in=ZFA:0000944]) [-4] ! parse: GO:0048941 using "posterior lateral line nerve glial cell development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(FBbt:00005144, [OBO_REL:part_of=ZFA:0000175])]) [-3] ! parse: GO:0048941 using "posterior lateral line nerve glial cell development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(ZFA:0009073, [OBO_REL:part_of=FBbt:00005105]), OBO_REL:unfolds_in=ZFA:0000944]) [-4] ! parse: GO:0048941 using "posterior lateral line nerve glial cell development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(ZFA:0009073, [OBO_REL:part_of=MA:0000217]), OBO_REL:unfolds_in=ZFA:0000944]) [-4] ! parse: GO:0048941 using "posterior lateral line nerve glial cell development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(ZFA:0009073, [OBO_REL:part_of=ZFA:0000175])]) [-3] ! parse: GO:0048941 using "posterior lateral line nerve glial cell development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(cdef(FBbt:00005144, [OBO_REL:part_of=FBbt:00005105]), [OBO_REL:part_of=ZFA:0000944])]) [-4] ! parse: GO:0048941 using "posterior lateral line nerve glial cell development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(cdef(FBbt:00005144, [OBO_REL:part_of=MA:0000217]), [OBO_REL:part_of=ZFA:0000944])]) [-4] ! parse: GO:0048941 using "posterior lateral line nerve glial cell development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(cdef(ZFA:0009073, [OBO_REL:part_of=FBbt:00005105]), [OBO_REL:part_of=ZFA:0000944])]) [-4] ! parse: GO:0048941 using "posterior lateral line nerve glial cell development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(cdef(ZFA:0009073, [OBO_REL:part_of=MA:0000217]), [OBO_REL:part_of=ZFA:0000944])]) [-4] ! no existing xp def ! def: "The process aimed at the progression of a glial cell in the posterior lateral line nerve over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell." ! PROPOSED: developmental process that results_in_complete_developmental_of cdef(ZFA:0009073, [OBO_REL:part_of=ZFA:0000175]) [cdef(GO:0032502, [results_in_complete_developmental_of=cdef(ZFA:0009073, [OBO_REL:part_of=ZFA:0000175])])] [Term] id: GO:0048941 ! posterior lateral line nerve glial cell development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of caudal_lateral_line_nerve_glial_cell synonym: "caudal lateral line nerve glial cell development" EXACT [OBOL:automatic] synonym: "glial cell of caudal lateral line nerve development" EXACT [OBOL:automatic] synonym: "glial cell of posterior lateral line nerve development" EXACT [OBOL:automatic] synonym: "glial cell of the caudal lateral line nerve development" EXACT [OBOL:automatic] synonym: "glial cell of the posterior lateral line nerve development" EXACT [OBOL:automatic] synonym: "neuroglia of caudal lateral line nerve development" EXACT [OBOL:automatic] synonym: "neuroglia of posterior lateral line nerve development" EXACT [OBOL:automatic] synonym: "neuroglia of the caudal lateral line nerve development" EXACT [OBOL:automatic] synonym: "neuroglia of the posterior lateral line nerve development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0048941: 22.73 ! parse: GO:0048942 using "posterior lateral line nerve glial cell morphogenesis during differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(morphogenesis during, cell), OBO_REL:unfolds_in=cdef(FBbt:00005144, [OBO_REL:part_of=ZFA:0000175])]) [-23] ! parse: GO:0048942 using "posterior lateral line nerve glial cell morphogenesis during differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(morphogenesis during, cell), OBO_REL:unfolds_in=cdef(ZFA:0009073, [OBO_REL:part_of=ZFA:0000175])]) [-23] ! parse: GO:0048942 using "posterior lateral line nerve glial cell morphogenesis during differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(morphogenesis during, cell), OBO_REL:unfolds_in=cdef(cdef(FBbt:00005144, [OBO_REL:part_of=FBbt:00005105]), [OBO_REL:part_of=ZFA:0000944])]) [-24] ! parse: GO:0048942 using "posterior lateral line nerve glial cell morphogenesis during differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(morphogenesis during, cell), OBO_REL:unfolds_in=cdef(cdef(FBbt:00005144, [OBO_REL:part_of=MA:0000217]), [OBO_REL:part_of=ZFA:0000944])]) [-24] ! parse: GO:0048942 using "posterior lateral line nerve glial cell morphogenesis during differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(morphogenesis during, cell), OBO_REL:unfolds_in=cdef(cdef(ZFA:0009073, [OBO_REL:part_of=FBbt:00005105]), [OBO_REL:part_of=ZFA:0000944])]) [-24] ! parse: GO:0048942 using "posterior lateral line nerve glial cell morphogenesis during differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(morphogenesis during, cell), OBO_REL:unfolds_in=cdef(cdef(ZFA:0009073, [OBO_REL:part_of=MA:0000217]), [OBO_REL:part_of=ZFA:0000944])]) [-24] ! parse: GO:0048942 using "posterior lateral line nerve glial cell morphogenesis during differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(nerve glial cell morphogenesis during, cell), OBO_REL:unfolds_in=ZFA:0000944]) [-39] ! parse: GO:0048942 using "posterior lateral line nerve glial cell morphogenesis during differentiation" => cdef(GO:0030154, [and=results_in_acquisition_of_features_of(anon(morphogenesis during, cell))/unfolds_in(CL:0000125), OBO_REL:unfolds_in=ZFA:0000175]) [-3] ! parse: GO:0048942 using "posterior lateral line nerve glial cell morphogenesis during differentiation" => cdef(GO:0030154, [and=results_in_acquisition_of_features_of(anon(morphogenesis during, cell))/unfolds_in(CL:0000125), OBO_REL:unfolds_in=cell:posterior_lateral_line_nerve]) [-3] ! parse: GO:0048942 using "posterior lateral line nerve glial cell morphogenesis during differentiation" => cdef(GO:0030154, [and=results_in_acquisition_of_features_of(anon(morphogenesis during, cell))/unfolds_in(CL:0000125), OBO_REL:unfolds_in=cdef(FBbt:00005105, [OBO_REL:part_of=ZFA:0000944])]) [-4] ! parse: GO:0048942 using "posterior lateral line nerve glial cell morphogenesis during differentiation" => cdef(GO:0030154, [and=results_in_acquisition_of_features_of(anon(morphogenesis during, cell))/unfolds_in(CL:0000125), OBO_REL:unfolds_in=cdef(MA:0000217, [OBO_REL:part_of=ZFA:0000944])]) [-4] ! parse: GO:0048942 using "posterior lateral line nerve glial cell morphogenesis during differentiation" => cdef(GO:0030154, [and=results_in_acquisition_of_features_of(anon(morphogenesis during, cell))/unfolds_in(FBbt:00005144), OBO_REL:unfolds_in=ZFA:0000175]) [-3] ! parse: GO:0048942 using "posterior lateral line nerve glial cell morphogenesis during differentiation" => cdef(GO:0030154, [and=results_in_acquisition_of_features_of(anon(morphogenesis during, cell))/unfolds_in(FBbt:00005144), OBO_REL:unfolds_in=cell:posterior_lateral_line_nerve]) [-3] ! parse: GO:0048942 using "posterior lateral line nerve glial cell morphogenesis during differentiation" => cdef(GO:0030154, [and=results_in_acquisition_of_features_of(anon(morphogenesis during, cell))/unfolds_in(FBbt:00005144), OBO_REL:unfolds_in=cdef(FBbt:00005105, [OBO_REL:part_of=ZFA:0000944])]) [-4] ! parse: GO:0048942 using "posterior lateral line nerve glial cell morphogenesis during differentiation" => cdef(GO:0030154, [and=results_in_acquisition_of_features_of(anon(morphogenesis during, cell))/unfolds_in(FBbt:00005144), OBO_REL:unfolds_in=cdef(MA:0000217, [OBO_REL:part_of=ZFA:0000944])]) [-4] ! parse: GO:0048942 using "posterior lateral line nerve glial cell morphogenesis during differentiation" => cdef(GO:0030154, [and=results_in_acquisition_of_features_of(anon(morphogenesis during, cell))/unfolds_in(ZFA:0009073), OBO_REL:unfolds_in=ZFA:0000175]) [-3] ! parse: GO:0048942 using "posterior lateral line nerve glial cell morphogenesis during differentiation" => cdef(GO:0030154, [and=results_in_acquisition_of_features_of(anon(morphogenesis during, cell))/unfolds_in(ZFA:0009073), OBO_REL:unfolds_in=cell:posterior_lateral_line_nerve]) [-3] ! parse: GO:0048942 using "posterior lateral line nerve glial cell morphogenesis during differentiation" => cdef(GO:0030154, [and=results_in_acquisition_of_features_of(anon(morphogenesis during, cell))/unfolds_in(ZFA:0009073), OBO_REL:unfolds_in=cdef(FBbt:00005105, [OBO_REL:part_of=ZFA:0000944])]) [-4] ! parse: GO:0048942 using "posterior lateral line nerve glial cell morphogenesis during differentiation" => cdef(GO:0030154, [and=results_in_acquisition_of_features_of(anon(morphogenesis during, cell))/unfolds_in(ZFA:0009073), OBO_REL:unfolds_in=cdef(MA:0000217, [OBO_REL:part_of=ZFA:0000944])]) [-4] ! parse: GO:0048942 using "posterior lateral line nerve glial cell morphogenesis during differentiation" => cdef(GO:0030154, [and=results_in_acquisition_of_features_of(anon(morphogenesis during, cell))/unfolds_in(that(FBbt:00005144, part_of(FBbt:00005105))), OBO_REL:unfolds_in=ZFA:0000944]) [-3] ! parse: GO:0048942 using "posterior lateral line nerve glial cell morphogenesis during differentiation" => cdef(GO:0030154, [and=results_in_acquisition_of_features_of(anon(morphogenesis during, cell))/unfolds_in(that(FBbt:00005144, part_of(MA:0000217))), OBO_REL:unfolds_in=ZFA:0000944]) [-3] ! parse: GO:0048942 using "posterior lateral line nerve glial cell morphogenesis during differentiation" => cdef(GO:0030154, [and=results_in_acquisition_of_features_of(anon(morphogenesis during, cell))/unfolds_in(that(ZFA:0009073, part_of(FBbt:00005105))), OBO_REL:unfolds_in=ZFA:0000944]) [-3] ! parse: GO:0048942 using "posterior lateral line nerve glial cell morphogenesis during differentiation" => cdef(GO:0030154, [and=results_in_acquisition_of_features_of(anon(morphogenesis during, cell))/unfolds_in(that(ZFA:0009073, part_of(MA:0000217))), OBO_REL:unfolds_in=ZFA:0000944]) [-3] ! parse: GO:0048942 using "posterior lateral line nerve glial cell morphogenesis during differentiation" => cdef(GO:0030154, [and=and(results_in_acquisition_of_features_of(anon(morphogenesis during, cell)), unfolds_in(CL:0000125))/unfolds_in(FBbt:00005105), OBO_REL:unfolds_in=ZFA:0000944]) [-3] ! parse: GO:0048942 using "posterior lateral line nerve glial cell morphogenesis during differentiation" => cdef(GO:0030154, [and=and(results_in_acquisition_of_features_of(anon(morphogenesis during, cell)), unfolds_in(CL:0000125))/unfolds_in(MA:0000217), OBO_REL:unfolds_in=ZFA:0000944]) [-3] ! parse: GO:0048942 using "posterior lateral line nerve glial cell morphogenesis during differentiation" => cdef(GO:0030154, [and=and(results_in_acquisition_of_features_of(anon(morphogenesis during, cell)), unfolds_in(FBbt:00005144))/unfolds_in(FBbt:00005105), OBO_REL:unfolds_in=ZFA:0000944]) [-3] ! parse: GO:0048942 using "posterior lateral line nerve glial cell morphogenesis during differentiation" => cdef(GO:0030154, [and=and(results_in_acquisition_of_features_of(anon(morphogenesis during, cell)), unfolds_in(FBbt:00005144))/unfolds_in(MA:0000217), OBO_REL:unfolds_in=ZFA:0000944]) [-3] ! parse: GO:0048942 using "posterior lateral line nerve glial cell morphogenesis during differentiation" => cdef(GO:0030154, [and=and(results_in_acquisition_of_features_of(anon(morphogenesis during, cell)), unfolds_in(ZFA:0009073))/unfolds_in(FBbt:00005105), OBO_REL:unfolds_in=ZFA:0000944]) [-3] ! parse: GO:0048942 using "posterior lateral line nerve glial cell morphogenesis during differentiation" => cdef(GO:0030154, [and=and(results_in_acquisition_of_features_of(anon(morphogenesis during, cell)), unfolds_in(ZFA:0009073))/unfolds_in(MA:0000217), OBO_REL:unfolds_in=ZFA:0000944]) [-3] ! no existing xp def ! def: "The process by which the structures of a glial cell in the posterior lateral line nerve are generated and organized. This process occurs while the initally relatively unspecialized cell is acquiring the specialized features of a glial cell in the posterior lateral line nerve." ! PROPOSED: cell differentiation that and and(results_in_acquisition_of_features_of(anon(morphogenesis during, cell)), unfolds_in(ZFA:0009073))/unfolds_in(MA:0000217) and OBO_REL:unfolds_in posterior lateral line [cdef(GO:0030154, [and=and(results_in_acquisition_of_features_of(anon(morphogenesis during, cell)), unfolds_in(ZFA:0009073))/unfolds_in(MA:0000217), OBO_REL:unfolds_in=ZFA:0000944])] [Term] id: GO:0048942 ! posterior lateral line nerve glial cell morphogenesis during differentiation intersection_of: GO:0030154 ! cell differentiation intersection_of: and and(results_in_acquisition_of_features_of(anon(morphogenesis during, cell)), unfolds_in(ZFA:0009073))/unfolds_in(MA:0000217) intersection_of: OBO_REL:unfolds_in ZFA:0000944 ! posterior lateral line ! seconds spent parsing GO:0048942: 20.12 ! parse: GO:0050000 using "chromosome localization" => cdef(GO:0051179, [OBO_REL:results_in_localization_of=GO:0005694]) [-2] ! no existing xp def ! def: "The processes by which a chromosome is transported to, or maintained in, a specific location." ! PROPOSED: localization that OBO_REL:results_in_localization_of chromosome [cdef(GO:0051179, [OBO_REL:results_in_localization_of=GO:0005694])] [Term] id: GO:0050000 ! chromosome localization intersection_of: GO:0051179 ! localization intersection_of: OBO_REL:results_in_localization_of GO:0005694 ! chromosome synonym: "chromatid establishment and maintenance of localization" EXACT [OBOL:automatic] synonym: "chromatid establishment and maintenance of position" EXACT [OBOL:automatic] synonym: "chromatid localization" EXACT [OBOL:automatic] ! seconds spent parsing GO:0050000: 15.37 ! Already have xp for: GO:0050673 epithelial cell proliferation ! CURRENT : cell proliferation that OBO_REL:increases_population_size_of epithelial cell [cdef(GO:0008283, [OBO_REL:increases_population_size_of=CL:0000066])] ! Already have xp for: GO:0050674 urothelial cell proliferation ! CURRENT : cell proliferation that OBO_REL:increases_population_size_of urothelial cell [cdef(GO:0008283, [OBO_REL:increases_population_size_of=CL:0000731])] ! Already have xp for: GO:0050691 regulation of antiviral response by host ! CURRENT : regulation of antiviral response that OBO_REL:has_enabler host [cdef(GO:0050688, [OBO_REL:has_enabler=obol:host])] ! No parse for: GO:0050701 interleukin-1 secretion ! No parse for: GO:0050702 interleukin-1 beta secretion ! No parse for: GO:0050703 interleukin-1 alpha secretion ! Already have xp for: GO:0050796 regulation of insulin secretion ! CURRENT : biological regulation that OBO_REL:regulates insulin secretion and regulates insulin secretion [cdef(GO:0065007, [OBO_REL:regulates=GO:0030073, regulates=GO:0030073])] ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0050808 using "synapse development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00005114]) [-2] ! parse: GO:0050808 using "synapse development" => cdef(GO:0032502, [results_in_complete_developmental_of=GO:0045202]) [-2] ! parse: GO:0050808 using "synapse organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0045202]) [-2] ! no existing xp def ! def: "A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a synapse, the junction between a neuron and a target (neuron, muscle, or secretory cell)." ! PROPOSED: developmental process that results_in_complete_developmental_of synapse [cdef(GO:0032502, [results_in_complete_developmental_of=GO:0045202])] [Term] id: GO:0050808 ! synapse organization and biogenesis intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of GO:0045202 ! synapse synonym: "synaptic junction development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0050808: 19.02 ! Already have xp for: GO:0050810 regulation of steroid biosynthetic process ! CURRENT : biological regulation that OBO_REL:regulates steroid biosynthetic process and regulates steroid biosynthetic process [cdef(GO:0065007, [OBO_REL:regulates=GO:0006694, regulates=GO:0006694])] ! Already have xp for: GO:0050812 regulation of acyl-CoA biosynthetic process ! CURRENT : biological regulation that OBO_REL:regulates acyl-CoA biosynthetic process and regulates acyl-CoA biosynthetic process [cdef(GO:0065007, [OBO_REL:regulates=GO:0046949, regulates=GO:0046949])] ! No parse for: GO:0050821 protein stabilization ! No parse for: GO:0050852 T cell receptor signaling pathway ! No parse for: GO:0050853 B cell receptor signaling pathway ! Already have xp for: GO:0050872 white fat cell differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of white fat cell [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000448])] ! Already have xp for: GO:0050873 brown fat cell differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of brown fat cell [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000449])] ! No parse for: GO:0050879 multicellular organismal movement ! No parse for: GO:0050891 body fluid osmoregulation ! No parse for: GO:0050892 intestinal absorption ! Already have xp for: GO:0050900 leukocyte migration ! CURRENT : cell migration that OBO_REL:results_in_movement_of leukocyte [cdef(GO:0016477, [OBO_REL:results_in_movement_of=CL:0000738])] ! No parse for: GO:0050901 leukocyte tethering or rolling ! No parse for: GO:0050902 leukocyte adhesive activation ! No parse for: GO:0050903 leukocyte activation-dependent arrest ! Already have xp for: GO:0050931 pigment cell differentiation ! CURRENT : cell differentiation that OBO_REL:part_of pigmentation and OBO_REL:results_in_acquisition_of_features_of pigment cell [cdef(GO:0030154, [OBO_REL:part_of=GO:0043473, OBO_REL:results_in_acquisition_of_features_of=CL:0000147])] ! Already have xp for: GO:0050935 iridophore differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of iridophore [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000431])] ! Already have xp for: GO:0050936 xanthophore differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of xanthophore [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000430])] ! No parse for: GO:0050983 spermidine catabolic process to deoxyhypusine, using deoxyhypusine synthase ! No parse for: GO:0050987 enzyme active site formation via O-sulfo-L-serine ! No parse for: GO:0050991 enzyme active site formation via O-sulfo-L-threonine ! No parse for: GO:0051012 microtubule sliding ! No parse for: GO:0051013 microtubule severing ! No parse for: GO:0051014 actin filament severing ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0051017 using "actin filament bundle formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=GO:0032432]) [-2] ! parse: GO:0051017 using "actin filament bundle formation" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0032432]) [-2] ! parse: GO:0051017 using "actin filament bundle formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0032432]) [-2] ! parse: GO:0051017 using "actin filament bundle formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(bundle, anatomy), OBO_REL:unfolds_in=GO:0005884]) [-8] ! no existing xp def ! def: "The assembly of actin filament bundles; actin filaments are on the same axis but may be oriented with the same or opposite polarities and may be packed with different levels of tightness." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of actin filament bundle [cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0032432])] [Term] id: GO:0051017 ! actin filament bundle formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of GO:0032432 ! actin filament bundle synonym: "actin filament bundle anatomical structure formation" EXACT [OBOL:automatic] synonym: "actin filament bundle formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0051017: 12.38 ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0051026 using "chiasma formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=FBbt:00005814]) [-2] ! parse: GO:0051026 using "chiasma formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=GO:0005712]) [-2] ! parse: GO:0051026 using "chiasma formation" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0005712]) [-2] ! parse: GO:0051026 using "chiasma formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=FBbt:00005814]) [-2] ! parse: GO:0051026 using "chiasma formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0005712]) [-2] ! no existing xp def ! def: "The cell cycle process whereby a connection between chromatids forms, indicating where an exchange of homologous segments has taken place by the crossing-over of non-sister chromatids." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of chiasma [cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0005712])] [Term] id: GO:0051026 ! chiasma formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of GO:0005712 ! chiasma synonym: "chiasma anatomical structure formation" EXACT [OBOL:automatic] synonym: "chiasma formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0051026: 7.45 ! No parse for: GO:0051031 tRNA transport ! parse: GO:0051081 using "nuclear envelope disassembly" => cdef(GO:0022411, [OBO_REL:results_in_breakdown_of=GO:0005635]) [-2] ! no existing xp def ! def: "The controlled breakdown of the nuclear envelope in the context of a normal process." ! PROPOSED: cellular component disassembly that OBO_REL:results_in_breakdown_of nuclear envelope [cdef(GO:0022411, [OBO_REL:results_in_breakdown_of=GO:0005635])] [Term] id: GO:0051081 ! nuclear envelope disassembly intersection_of: GO:0022411 ! cellular component disassembly intersection_of: OBO_REL:results_in_breakdown_of GO:0005635 ! nuclear envelope synonym: "cell structure disassembly of nuclear envelope" EXACT [OBOL:automatic] synonym: "cellular component disassembly of nuclear envelope" EXACT [OBOL:automatic] synonym: "disassembly of nuclear envelope" EXACT [OBOL:automatic] synonym: "nuclear envelope cell structure disassembly" EXACT [OBOL:automatic] synonym: "nuclear envelope cellular component disassembly" EXACT [OBOL:automatic] ! seconds spent parsing GO:0051081: 24.4 ! No parse for: GO:0051113 enzyme active site formation via 1'-(phospho-5'-adenosine)-L-histidine ! No parse for: GO:0051115 enzyme active site formation via 1'-(phospho-5'-uridine)-L-histidine ! No parse for: GO:0051131 chaperone-mediated protein complex assembly ! Already have xp for: GO:0051145 smooth muscle cell differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of smooth muscle cell [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000192])] ! Already have xp for: GO:0051146 striated muscle cell differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of striated muscle cell [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000737])] ! parse: GO:0051168 using "export from nucleus" => cdef(GO:0006810, [OBO_REL:results_in_transport_from=GO:0005634]) [-2] ! no existing xp def ! def: "The directed movement of substances out of the nucleus." ! PROPOSED: transport that OBO_REL:results_in_transport_from nucleus [cdef(GO:0006810, [OBO_REL:results_in_transport_from=GO:0005634])] [Term] id: GO:0051168 ! nuclear export intersection_of: GO:0006810 ! transport intersection_of: OBO_REL:results_in_transport_from GO:0005634 ! nucleus ! seconds spent parsing GO:0051168: 17.98 ! parse: GO:0051169 using "nucleus transport" => cdef(GO:0006810, [OBO_REL:results_in_transport_of=GO:0005634]) [-2] ! no existing xp def ! def: "The directed movement of substances into, out of, or within the nucleus." ! PROPOSED: transport that OBO_REL:results_in_transport_of nucleus [cdef(GO:0006810, [OBO_REL:results_in_transport_of=GO:0005634])] [Term] id: GO:0051169 ! nuclear transport intersection_of: GO:0006810 ! transport intersection_of: OBO_REL:results_in_transport_of GO:0005634 ! nucleus ! seconds spent parsing GO:0051169: 10.46 ! parse: GO:0051170 using "import into nucleus" => cdef(GO:0006810, [OBO_REL:results_in_transport_to=GO:0005634]) [-2] ! no existing xp def ! def: "The directed movement of substances into the nucleus." ! PROPOSED: transport that OBO_REL:results_in_transport_to nucleus [cdef(GO:0006810, [OBO_REL:results_in_transport_to=GO:0005634])] [Term] id: GO:0051170 ! nuclear import intersection_of: GO:0006810 ! transport intersection_of: OBO_REL:results_in_transport_to GO:0005634 ! nucleus synonym: "hydrolase activity, acting on acid anhydrides, acting on GTP, involved in cellular and subcellular movement to nucleus" EXACT [OBOL:automatic] synonym: "transport to nucleus" EXACT [OBOL:automatic] ! seconds spent parsing GO:0051170: 22.38 ! Already have xp for: GO:0051178 meiotic chromosome decondensation ! CURRENT : chromosome decondensation that OBO_REL:part_of meiosis [cdef(GO:0051312, [OBO_REL:part_of=GO:0007126])] ! parse: GO:0051205 using "membrane protein localization" => cdef(GO:0008104, [OBO_REL:results_in_localization_of=GO:0016020]) [-2] ! no existing xp def ! def: "The process by which a protein is incorporated into a biological membrane." ! PROPOSED: protein localization that OBO_REL:results_in_localization_of membrane [cdef(GO:0008104, [OBO_REL:results_in_localization_of=GO:0016020])] [Term] id: GO:0051205 ! protein insertion into membrane intersection_of: GO:0008104 ! protein localization intersection_of: OBO_REL:results_in_localization_of GO:0016020 ! membrane ! seconds spent parsing GO:0051205: 39.07 ! No parse for: GO:0051209 release of sequestered calcium ion into cytosol ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0051216 using "cartilage biosynthesis" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=MA:0000104]) [-2] ! parse: GO:0051216 using "cartilage biosynthesis" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=ZFA:0001501]) [-2] ! parse: GO:0051216 using "cartilage development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000104]) [-2] ! parse: GO:0051216 using "cartilage development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0001501]) [-2] ! parse: GO:0051216 using "cartilage formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=MA:0000104]) [-2] ! parse: GO:0051216 using "cartilage formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=ZFA:0001501]) [-2] ! parse: GO:0051216 using "cartilage formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=MA:0000104]) [-2] ! parse: GO:0051216 using "cartilage formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0001501]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of cartilage [cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0001501])] [Term] id: GO:0051216 ! cartilage development intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of ZFA:0001501 ! cartilage ! seconds spent parsing GO:0051216: 27.9 ! No parse for: GO:0051220 cytoplasmic sequestering of protein ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0051225 using "bipolar spindle formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(bipolar spindle, anatomy)]) [-16] ! parse: GO:0051225 using "spindle assembly" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0005819]) [-2] ! parse: GO:0051225 using "spindle biogenesis" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0005819]) [-2] ! parse: GO:0051225 using "spindle biosynthesis" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=GO:0005819]) [-2] ! parse: GO:0051225 using "spindle formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=GO:0005819]) [-2] ! parse: GO:0051225 using "spindle formation" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0005819]) [-2] ! parse: GO:0051225 using "spindle formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0005819]) [-2] ! no existing xp def ! def: "The aggregation and bonding together of a set of components to form the spindle, the array of microtubules and associated molecules that serves to move duplicated chromosomes apart." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of spindle [cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0005819])] [Term] id: GO:0051225 ! spindle assembly intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of GO:0005819 ! spindle synonym: "spindle anatomical structure formation" EXACT [OBOL:automatic] synonym: "spindle formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0051225: 33.12 ! Already have xp for: GO:0051228 mitotic spindle disassembly ! CURRENT : spindle disassembly that OBO_REL:part_of mitosis [cdef(GO:0051230, [OBO_REL:part_of=GO:0007067])] ! Already have xp for: GO:0051229 meiotic spindle disassembly ! CURRENT : spindle disassembly that OBO_REL:part_of meiosis [cdef(GO:0051230, [OBO_REL:part_of=GO:0007126])] ! parse: GO:0051230 using "spindle disassembly" => cdef(GO:0022411, [OBO_REL:results_in_breakdown_of=GO:0005819]) [-2] ! no existing xp def ! def: "The controlled breakdown of the spindle, the array of microtubules and associated molecules that serves to move duplicated chromosomes apart." ! PROPOSED: cellular component disassembly that OBO_REL:results_in_breakdown_of spindle [cdef(GO:0022411, [OBO_REL:results_in_breakdown_of=GO:0005819])] [Term] id: GO:0051230 ! spindle disassembly intersection_of: GO:0022411 ! cellular component disassembly intersection_of: OBO_REL:results_in_breakdown_of GO:0005819 ! spindle synonym: "cell structure disassembly of spindle" EXACT [OBOL:automatic] synonym: "cellular component disassembly of spindle" EXACT [OBOL:automatic] synonym: "disassembly of spindle" EXACT [OBOL:automatic] synonym: "spindle cell structure disassembly" EXACT [OBOL:automatic] synonym: "spindle cellular component disassembly" EXACT [OBOL:automatic] ! seconds spent parsing GO:0051230: 24.31 ! No relation defined: results_in_increased_length_of ! parse: GO:0051231 using "spindle elongation" => cdef(GO:0008150, [results_in_increased_length_of=GO:0005819]) [-2] ! no existing xp def ! def: "The cell cycle process whereby the distance is lengthened between poles of the spindle." ! PROPOSED: biological_process that results_in_increased_length_of spindle [cdef(GO:0008150, [results_in_increased_length_of=GO:0005819])] [Term] id: GO:0051231 ! spindle elongation intersection_of: GO:0008150 ! biological_process intersection_of: results_in_increased_length_of GO:0005819 ! spindle synonym: "elongation of spindle" EXACT [OBOL:automatic] ! seconds spent parsing GO:0051231: 5.7 ! Already have xp for: GO:0051232 meiotic spindle elongation ! CURRENT : spindle elongation that OBO_REL:part_of meiosis [cdef(GO:0051231, [OBO_REL:part_of=GO:0007126])] ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0051255 using "spindle midzone assembly" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0051233]) [-2] ! parse: GO:0051255 using "spindle midzone biogenesis" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0051233]) [-2] ! parse: GO:0051255 using "spindle midzone biosynthesis" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=GO:0051233]) [-2] ! parse: GO:0051255 using "spindle midzone formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=GO:0051233]) [-2] ! parse: GO:0051255 using "spindle midzone formation" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0051233]) [-2] ! parse: GO:0051255 using "spindle midzone formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0051233]) [-2] ! parse: GO:0051255 using "spindle midzone formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(midzone, anatomy), OBO_REL:unfolds_in=GO:0005819]) [-9] ! no existing xp def ! def: "The cell cycle process whereby aggregation and bonding together of a set of components to form the spindle midzone. The spindle midzone is the area in the center of the spindle where the spindle microtubules from opposite poles overlap." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of spindle midzone [cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0051233])] [Term] id: GO:0051255 ! spindle midzone assembly intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of GO:0051233 ! spindle midzone synonym: "spindle equator anatomical structure formation" EXACT [OBOL:automatic] synonym: "spindle equator formation" EXACT [OBOL:automatic] synonym: "spindle equator formation of an anatomical structure" EXACT [OBOL:automatic] synonym: "spindle midzone anatomical structure formation" EXACT [OBOL:automatic] synonym: "spindle midzone formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0051255: 45.88 ! Already have xp for: GO:0051256 spindle midzone assembly involved in mitosis ! CURRENT : spindle midzone assembly that OBO_REL:part_of mitosis [cdef(GO:0051255, [OBO_REL:part_of=GO:0007067])] ! Already have xp for: GO:0051257 spindle midzone assembly involved in meiosis ! CURRENT : spindle midzone assembly that OBO_REL:part_of meiosis [cdef(GO:0051255, [OBO_REL:part_of=GO:0007126])] ! parse: GO:0051276 using "chromosome organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0005694]) [-2] ! no existing xp def ! def: "A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of chromosomes, structures composed of a very long molecule of DNA and associated proteins that carries hereditary information." ! PROPOSED: cellular component organization and biogenesis that OBO_REL:results_in_structural_change_to chromosome [cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0005694])] [Term] id: GO:0051276 ! chromosome organization and biogenesis intersection_of: GO:0016043 ! cellular component organization and biogenesis intersection_of: OBO_REL:results_in_structural_change_to GO:0005694 ! chromosome synonym: "chromatid organization" EXACT [OBOL:automatic] synonym: "chromatid organization and biogenesis" EXACT [OBOL:automatic] synonym: "chromosome organization" EXACT [OBOL:automatic] ! seconds spent parsing GO:0051276: 5.72 ! No parse for: GO:0051277 chromosome organization and biogenesis (sensu Bacteria) ! parse: GO:0051278 using "chitin- and beta-glucan-containing cell wall polysaccharide biosynthetic process" => cdef(GO:0000271, [OBO_REL:results_in_creation_of=GO:0009277]) [-2] ! no existing xp def ! def: "The chemical reactions and pathways resulting in the formation of the polysaccharides which make up the chitin- and beta-glucan-containing cell wall." ! PROPOSED: polysaccharide biosynthetic process that OBO_REL:results_in_creation_of chitin- and beta-glucan-containing cell wall [cdef(GO:0000271, [OBO_REL:results_in_creation_of=GO:0009277])] [Term] id: GO:0051278 ! chitin- and beta-glucan-containing cell wall polysaccharide biosynthetic process intersection_of: GO:0000271 ! polysaccharide biosynthetic process intersection_of: OBO_REL:results_in_creation_of GO:0009277 ! chitin- and beta-glucan-containing cell wall synonym: "beta-glucan-containing cell wall glycan biosynthesis" EXACT [OBOL:automatic] synonym: "beta-glucan-containing cell wall glycan biosynthetic process" EXACT [OBOL:automatic] synonym: "beta-glucan-containing cell wall polysaccharide anabolism" EXACT [OBOL:automatic] synonym: "beta-glucan-containing cell wall polysaccharide biosynthesis" EXACT [OBOL:automatic] synonym: "beta-glucan-containing cell wall polysaccharide biosynthetic process" EXACT [OBOL:automatic] synonym: "beta-glucan-containing cell wall polysaccharide formation" EXACT [OBOL:automatic] synonym: "beta-glucan-containing cell wall polysaccharide synthesis" EXACT [OBOL:automatic] synonym: "cell wall (sensu Fungi) glycan biosynthesis" EXACT [OBOL:automatic] synonym: "cell wall (sensu Fungi) glycan biosynthetic process" EXACT [OBOL:automatic] synonym: "cell wall (sensu Fungi) polysaccharide anabolism" EXACT [OBOL:automatic] synonym: "cell wall (sensu Fungi) polysaccharide biosynthesis" EXACT [OBOL:automatic] synonym: "cell wall (sensu Fungi) polysaccharide biosynthetic process" EXACT [OBOL:automatic] synonym: "cell wall (sensu Fungi) polysaccharide formation" EXACT [OBOL:automatic] synonym: "cell wall (sensu Fungi) polysaccharide synthesis" EXACT [OBOL:automatic] synonym: "chitin-and beta-glucan-containing cell wall polysaccharide biosynthetic process" EXACT [OBOL:automatic] def: "The aggregation and bonding together of a set of macromolecules to form a beta-glucan-containing cell wall" [OBOL:automatic] ! seconds spent parsing GO:0051278: 59.58 ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0051292 using "NPC assembly" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0005643]) [-2] ! parse: GO:0051292 using "nuclear pore assembly" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0005643]) [-2] ! parse: GO:0051292 using "nuclear pore biogenesis" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0005643]) [-2] ! parse: GO:0051292 using "nuclear pore biosynthesis" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=GO:0005643]) [-2] ! parse: GO:0051292 using "nuclear pore complex assembly" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0005643]) [-2] ! parse: GO:0051292 using "nuclear pore complex biogenesis" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0005643]) [-2] ! parse: GO:0051292 using "nuclear pore complex biosynthesis" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=GO:0005643]) [-2] ! parse: GO:0051292 using "nuclear pore complex formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=GO:0005643]) [-2] ! parse: GO:0051292 using "nuclear pore complex formation" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0005643]) [-2] ! parse: GO:0051292 using "nuclear pore complex formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0005643]) [-2] ! parse: GO:0051292 using "nuclear pore complex formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(complex, anatomy), OBO_REL:unfolds_in=GO:0005643]) [-9] ! parse: GO:0051292 using "nuclear pore formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=GO:0005643]) [-2] ! parse: GO:0051292 using "nuclear pore formation" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0005643]) [-2] ! parse: GO:0051292 using "nuclear pore formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0005643]) [-2] ! no existing xp def ! def: "The aggregation and bonding together of a set of components to form a nuclear pore complex." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of nuclear pore [cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0005643])] [Term] id: GO:0051292 ! nuclear pore complex assembly intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of GO:0005643 ! nuclear pore synonym: "NPC anatomical structure formation" EXACT [OBOL:automatic] synonym: "NPC formation" EXACT [OBOL:automatic] synonym: "NPC formation of an anatomical structure" EXACT [OBOL:automatic] synonym: "nuclear pore anatomical structure formation" EXACT [OBOL:automatic] synonym: "nuclear pore complex anatomical structure formation" EXACT [OBOL:automatic] synonym: "nuclear pore complex formation of an anatomical structure" EXACT [OBOL:automatic] synonym: "nuclear pore formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0051292: 68.34 ! parse: GO:0051293 using "establishment of spindle localization" => cdef(GO:0051179, [OBO_REL:results_in_localization_of=GO:0005819, OBO_REL:unfolds_in=cell:establishment_of]) [-3] ! parse: GO:0051293 using "establishment of spindle localization" => cdef(GO:0051653, [OBO_REL:results_in_localization_of=cell:establishment_of]) [-2] ! no existing xp def ! def: "The directed movement of the spindle to a specific location in the cell." ! PROPOSED: spindle localization that OBO_REL:results_in_localization_of establishment of [cdef(GO:0051653, [OBO_REL:results_in_localization_of=cell:establishment_of])] [Term] id: GO:0051293 ! establishment of spindle localization intersection_of: GO:0051653 ! spindle localization intersection_of: OBO_REL:results_in_localization_of cell:establishment_of ! establishment of ! seconds spent parsing GO:0051293: 18.82 ! No parse for: GO:0051294 establishment of spindle orientation ! Already have xp for: GO:0051295 establishment of meiotic spindle localization ! CURRENT : establishment of spindle localization that OBO_REL:part_of meiosis [cdef(GO:0051293, [OBO_REL:part_of=GO:0007126])] ! parse: GO:0051297 using "centrosome organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0005813]) [-2] ! no existing xp def ! def: "A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a centrosome, a structure comprised of a pair of centrioles and peri-centriolar material from which a microtubule spindle apparatus is organized." ! PROPOSED: cellular component organization and biogenesis that OBO_REL:results_in_structural_change_to centrosome [cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0005813])] [Term] id: GO:0051297 ! centrosome organization and biogenesis intersection_of: GO:0016043 ! cellular component organization and biogenesis intersection_of: OBO_REL:results_in_structural_change_to GO:0005813 ! centrosome synonym: "centrosome organization" EXACT [OBOL:automatic] ! seconds spent parsing GO:0051297: 11.34 ! No parse for: GO:0051298 centrosome duplication ! No parse for: GO:0051299 centrosome separation ! parse: GO:0051300 using "spindle pole body organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0005816]) [-2] ! no existing xp def ! def: "A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the spindle pole body (SPB). The SPB is the microtubule organizing center in fungi, and is functionally homologous to the animal cell centrosome." ! PROPOSED: cellular component organization and biogenesis that OBO_REL:results_in_structural_change_to spindle pole body [cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0005816])] [Term] id: GO:0051300 ! spindle pole body organization and biogenesis intersection_of: GO:0016043 ! cellular component organization and biogenesis intersection_of: OBO_REL:results_in_structural_change_to GO:0005816 ! spindle pole body synonym: "spindle pole body organization" EXACT [OBOL:automatic] ! seconds spent parsing GO:0051300: 40.06 ! parse: GO:0051301 using "cell division" => cdef(ZFA:0000098, [OBO_REL:results_in_division_of=CL:0000000]) [-2] ! no existing xp def ! def: "The processes resulting in the physical partitioning and separation of a cell into daughter cells." ! PROPOSED: proliferative region that OBO_REL:results_in_division_of cell [cdef(ZFA:0000098, [OBO_REL:results_in_division_of=CL:0000000])] [Term] id: GO:0051301 ! cell division intersection_of: ZFA:0000098 ! proliferative region intersection_of: OBO_REL:results_in_division_of CL:0000000 ! cell synonym: "cell cell cycle" EXACT [OBOL:automatic] synonym: "cell cell division" EXACT [OBOL:automatic] synonym: "cell proliferation" EXACT [OBOL:automatic] synonym: "cell proliferative region" EXACT [OBOL:automatic] def: "The creation of two or more CL:0000000 s by division of one CL:0000000" [OBOL:automatic] ! seconds spent parsing GO:0051301: 7.59 ! parse: GO:0051303 using "establishment of chromosome localization" => cdef(GO:0050000, [OBO_REL:results_in_localization_of=cell:establishment_of]) [-2] ! parse: GO:0051303 using "establishment of chromosome localization" => cdef(GO:0051179, [OBO_REL:results_in_localization_of=GO:0005694, OBO_REL:unfolds_in=cell:establishment_of]) [-3] ! no existing xp def ! def: "The directed movement of a chromosome to a specific location." ! PROPOSED: chromosome localization that OBO_REL:results_in_localization_of establishment of [cdef(GO:0050000, [OBO_REL:results_in_localization_of=cell:establishment_of])] [Term] id: GO:0051303 ! establishment of chromosome localization intersection_of: GO:0050000 ! chromosome localization intersection_of: OBO_REL:results_in_localization_of cell:establishment_of ! establishment of ! seconds spent parsing GO:0051303: 12.66 ! No parse for: GO:0051304 chromosome separation ! No parse for: GO:0051305 chromosome movement towards spindle pole ! parse: GO:0051306 using "chromosome separation during mitosis" => cdef(GO:0051304, [OBO_REL:part_of=GO:0007067]) [-2] ! parse: GO:0051306 using "mitotic chromosome separation" => cdef(GO:0051304, [OBO_REL:part_of=GO:0007067]) [-2] ! no existing xp def ! def: "The process by which sister chromatids are physically detached from each other during mitosis." ! PROPOSED: chromosome separation that OBO_REL:part_of mitosis [cdef(GO:0051304, [OBO_REL:part_of=GO:0007067])] [Term] id: GO:0051306 ! mitotic sister chromatid separation intersection_of: GO:0051304 ! chromosome separation intersection_of: OBO_REL:part_of GO:0007067 ! mitosis def: "A chromosome separation that is part of a mitosis" [OBOL:automatic] ! seconds spent parsing GO:0051306: 34.86 ! Already have xp for: GO:0051307 meiotic chromosome separation ! CURRENT : chromosome separation that OBO_REL:part_of meiosis [cdef(GO:0051304, [OBO_REL:part_of=GO:0007126])] ! Already have xp for: GO:0051308 male meiosis chromosome separation ! CURRENT : chromosome separation that OBO_REL:part_of male meiosis [cdef(GO:0051304, [OBO_REL:part_of=GO:0007140])] ! Already have xp for: GO:0051309 female meiosis chromosome separation ! CURRENT : chromosome separation that OBO_REL:part_of female meiosis [cdef(GO:0051304, [OBO_REL:part_of=GO:0007143])] ! No parse for: GO:0051312 chromosome decondensation ! parse: GO:0051313 using "spindle chromosome attachment" => cdef(GO:0008150, [OBO_REL:results_in_attachment_of=GO:0005819, OBO_REL:results_in_attachment_of=GO:0005694]) [-3] ! no existing xp def ! def: "The process by which spindle microtubules become physically associated with a chromosome." ! PROPOSED: biological_process that OBO_REL:results_in_attachment_of spindle and OBO_REL:results_in_attachment_of chromosome [cdef(GO:0008150, [OBO_REL:results_in_attachment_of=GO:0005819, OBO_REL:results_in_attachment_of=GO:0005694])] [Term] id: GO:0051313 ! attachment of spindle microtubules to chromosome intersection_of: GO:0008150 ! biological_process intersection_of: OBO_REL:results_in_attachment_of GO:0005819 ! spindle intersection_of: OBO_REL:results_in_attachment_of GO:0005694 ! chromosome synonym: "spindle chromatid anchoring" EXACT [OBOL:automatic] synonym: "spindle chromatid attachment" EXACT [OBOL:automatic] synonym: "spindle chromosome anchoring" EXACT [OBOL:automatic] def: "A biological process by which a spindle and a chromatid become attached" [OBOL:automatic] ! seconds spent parsing GO:0051313: 17.55 ! No parse for: GO:0051342 regulation of cyclic nucleotide phosphodiesterase activity ! No parse for: GO:0051343 positive regulation of cyclic nucleotide phosphodiesterase activity ! No parse for: GO:0051344 negative regulation of cyclic nucleotide phosphodiesterase activity ! No parse for: GO:0051363 peptidoglycan-protein cross-linking via L-alanyl-pentaglycyl-murein ! No parse for: GO:0051365 cellular response to potassium ion starvation ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0051382 using "kinetochore assembly" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0000776]) [-2] ! parse: GO:0051382 using "kinetochore biogenesis" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0000776]) [-2] ! parse: GO:0051382 using "kinetochore biosynthesis" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=GO:0000776]) [-2] ! parse: GO:0051382 using "kinetochore formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=GO:0000776]) [-2] ! parse: GO:0051382 using "kinetochore formation" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0000776]) [-2] ! parse: GO:0051382 using "kinetochore formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0000776]) [-2] ! no existing xp def ! def: "The aggregation and bonding together of a set of components to form the kinetochore, a multisubunit complex that is located at the pericentric region of DNA and provides an attachment point for the spindle microtubules." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of kinetochore [cdef(GO:0048646, [OBO_REL:results_in_formation_of=GO:0000776])] [Term] id: GO:0051382 ! kinetochore assembly intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of GO:0000776 ! kinetochore synonym: "kinetochore anatomical structure formation" EXACT [OBOL:automatic] synonym: "kinetochore formation of an anatomical structure" EXACT [OBOL:automatic] synonym: "kinetochore motor activity anatomical structure formation" EXACT [OBOL:automatic] synonym: "kinetochore motor activity formation" EXACT [OBOL:automatic] synonym: "kinetochore motor activity formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0051382: 23.99 ! parse: GO:0051383 using "kinetochore organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0000776]) [-2] ! no existing xp def ! def: "A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the kinetochore, a multisubunit complex that is located at the pericentric region of DNA and provides an attachment point for the spindle microtubules." ! PROPOSED: cellular component organization and biogenesis that OBO_REL:results_in_structural_change_to kinetochore [cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0000776])] [Term] id: GO:0051383 ! kinetochore organization and biogenesis intersection_of: GO:0016043 ! cellular component organization and biogenesis intersection_of: OBO_REL:results_in_structural_change_to GO:0000776 ! kinetochore synonym: "kinetochore motor activity organization" EXACT [OBOL:automatic] synonym: "kinetochore motor activity organization and biogenesis" EXACT [OBOL:automatic] synonym: "kinetochore organization" EXACT [OBOL:automatic] ! seconds spent parsing GO:0051383: 11.47 ! No parse for: GO:0051389 inactivation of MAPKK activity ! No parse for: GO:0051390 inactivation of MAPKKK activity ! No parse for: GO:0051391 tRNA acetylation ! Already have xp for: GO:0051402 neuron apoptosis ! CURRENT : apoptosis that OBO_REL:results_in_death_of neuron [cdef(GO:0006915, [OBO_REL:results_in_death_of=CL:0000540])] ! Already have xp for: GO:0051415 interphase microtubule nucleation by interphase microtubule organizing center ! CURRENT : microtubule nucleation that OBO_REL:part_of interphase_by_interphase_microtubule_organizing_center [cdef(GO:0007020, [OBO_REL:part_of=interphase_by_interphase_microtubule_organizing_center])] ! Already have xp for: GO:0051417 microtubule nucleation by spindle pole body ! CURRENT : microtubule nucleation that OBO_REL:has_enabler spindle pole body [cdef(GO:0007020, [OBO_REL:has_enabler=GO:0005816])] ! Already have xp for: GO:0051418 microtubule nucleation by microtubule organizing center ! CURRENT : microtubule nucleation that OBO_REL:has_enabler microtubule organizing center [cdef(GO:0007020, [OBO_REL:has_enabler=GO:0005815])] ! parse: GO:0051426 using "spindle pole body maturation" => cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=GO:0005816]) [-2] ! parse: GO:0051426 using "spindle pole body maturation" => cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=MA:0000004, OBO_REL:unfolds_in=GO:0000922]) [-3] ! no existing xp def ! def: "The processes by which the newly duplicated spindle pole body (SPB) is processed to attain its full functional capacity. In S. pombe, early maturation includes increase in size of the lamellar bodies, invagination of the nuclear envelope, and accumulation of material in a pocket under the SPB. Late maturation includes fenestration of the nuclear envelope, SPB separation and entry into the nucleus, giving rise to the spindle." ! PROPOSED: developmental maturation that OBO_REL:results_in_developmental_progression_of spindle pole body [cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=GO:0005816])] [Term] id: GO:0051426 ! spindle pole body maturation intersection_of: GO:0021700 ! developmental maturation intersection_of: OBO_REL:results_in_developmental_progression_of GO:0005816 ! spindle pole body synonym: "spindle pole body developmental maturation" EXACT [OBOL:automatic] ! seconds spent parsing GO:0051426: 22.01 ! Already have xp for: GO:0051436 negative regulation of ubiquitin ligase activity during mitotic cell cycle ! CURRENT : negative regulation of ubiquitin ligase activity that OBO_REL:part_of mitotic cell cycle [cdef(GO:0051444, [OBO_REL:part_of=GO:0000278])] ! No parse for: GO:0051438 regulation of ubiquitin ligase activity ! Already have xp for: GO:0051442 negative regulation of ubiquitin ligase activity during meiotic cell cycle ! CURRENT : negative regulation of ubiquitin ligase activity that OBO_REL:part_of meiotic cell cycle [cdef(GO:0051444, [OBO_REL:part_of=GO:0051321])] ! No parse for: GO:0051443 positive regulation of ubiquitin ligase activity ! No parse for: GO:0051444 negative regulation of ubiquitin ligase activity ! Already have xp for: GO:0051450 myoblast proliferation ! CURRENT : cell proliferation that OBO_REL:increases_population_size_of myoblast [cdef(GO:0008283, [OBO_REL:increases_population_size_of=CL:0000056])] ! Already have xp for: GO:0051451 myoblast migration ! CURRENT : cell migration that OBO_REL:results_in_movement_of myoblast [cdef(GO:0016477, [OBO_REL:results_in_movement_of=CL:0000056])] ! Already have xp for: GO:0051452 cellular pH reduction ! CURRENT : pH reduction that OBO_REL:part_of cellularization [cdef(GO:0045851, [OBO_REL:part_of=GO:0007349])] ! No parse for: GO:0051453 regulation of cellular pH ! Already have xp for: GO:0051454 cellular pH elevation ! CURRENT : pH elevation that OBO_REL:part_of cellularization [cdef(GO:0045852, [OBO_REL:part_of=GO:0007349])] ! Already have xp for: GO:0051458 adrenocorticotropin hormone secretion ! CURRENT : secretion that OBO_REL:results_in_creation_or_release_of ATCH [cdef(GO:0046903, [OBO_REL:results_in_creation_or_release_of=cell:ATCH])] ! No parse for: GO:0051469 vesicle fusion with vacuole ! parse: GO:0051480 using "calcium ion homeostasis in cytosol" => cdef(GO:0006874, [OBO_REL:unfolds_in=GO:0005829]) [-2] ! parse: GO:0051480 using "regulation of calcium ion concentration in cytosol" => cdef(GO:0006874, [OBO_REL:unfolds_in=GO:0005829]) [-2] ! no existing xp def ! def: "The regulation of the levels, transport, and metabolism of calcium ions within the cytosol of a cell or between the cytosol and its surroundings." ! PROPOSED: calcium ion homeostasis that OBO_REL:unfolds_in cytosol [cdef(GO:0006874, [OBO_REL:unfolds_in=GO:0005829])] [Term] id: GO:0051480 ! cytosolic calcium ion homeostasis intersection_of: GO:0006874 ! calcium ion homeostasis intersection_of: OBO_REL:unfolds_in GO:0005829 ! cytosol ! seconds spent parsing GO:0051480: 31.43 ! No parse for: GO:0051481 reduction of cytosolic calcium ion concentration ! Already have xp for: GO:0051487 anaphase-promoting complex activation during meiotic cell cycle ! CURRENT : anaphase-promoting complex activation that OBO_REL:part_of meiotic cell cycle [cdef(GO:0051488, [OBO_REL:part_of=GO:0051321])] ! No parse for: GO:0051488 anaphase-promoting complex activation ! No parse for: GO:0051520 termination of bipolar cell growth ! No parse for: GO:0051521 termination of monopolar cell growth ! No parse for: GO:0051523 cell growth mode switching, monopolar to bipolar ! No parse for: GO:0051524 cell growth mode switch, bipolar to monopolar ! No parse for: GO:0051541 elastin metabolic process ! No parse for: GO:0051542 elastin biosynthetic process ! Already have xp for: GO:0051546 keratinocyte migration ! CURRENT : cell migration that OBO_REL:results_in_movement_of keratinocyte [cdef(GO:0016477, [OBO_REL:results_in_movement_of=CL:0000312])] ! parse: GO:0051563 using "calcium ion homeostasis in smooth ER" => cdef(GO:0006874, [OBO_REL:unfolds_in=GO:0005790]) [-2] ! parse: GO:0051563 using "calcium ion homeostasis in smooth endoplasmic reticulum" => cdef(GO:0006874, [OBO_REL:unfolds_in=GO:0005790]) [-2] ! parse: GO:0051563 using "regulation of calcium ion concentration in smooth ER" => cdef(GO:0006874, [OBO_REL:unfolds_in=GO:0005790]) [-2] ! parse: GO:0051563 using "regulation of calcium ion concentration in smooth endoplasmic reticulum" => cdef(GO:0006874, [OBO_REL:unfolds_in=GO:0005790]) [-2] ! no existing xp def ! def: "The regulation of the levels, transport, and metabolism of calcium ions within the smooth endoplasmic reticulum of a cell or between the smooth endoplasmic reticulum and its surroundings." ! PROPOSED: calcium ion homeostasis that OBO_REL:unfolds_in smooth endoplasmic reticulum [cdef(GO:0006874, [OBO_REL:unfolds_in=GO:0005790])] [Term] id: GO:0051563 ! smooth endoplasmic reticulum calcium ion homeostasis intersection_of: GO:0006874 ! calcium ion homeostasis intersection_of: OBO_REL:unfolds_in GO:0005790 ! smooth endoplasmic reticulum ! seconds spent parsing GO:0051563: 73.67 ! No parse for: GO:0051564 elevation of smooth endoplasmic reticulum calcium ion concentration ! No parse for: GO:0051565 reduction of smooth endoplasmic reticulum calcium ion concentration ! parse: GO:0051601 using "exocyst localization" => cdef(GO:0051179, [OBO_REL:results_in_localization_of=GO:0000145]) [-2] ! no existing xp def ! def: "The processes by which an exocyst is transported to, or maintained in, a specific location. An exocyst is a protein complex peripherally associated with the plasma membrane that determines where secretory vesicles dock and fuse." ! PROPOSED: localization that OBO_REL:results_in_localization_of exocyst [cdef(GO:0051179, [OBO_REL:results_in_localization_of=GO:0000145])] [Term] id: GO:0051601 ! exocyst localization intersection_of: GO:0051179 ! localization intersection_of: OBO_REL:results_in_localization_of GO:0000145 ! exocyst ! seconds spent parsing GO:0051601: 10.85 ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0051639 using "actin filament network formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(network, anatomy), OBO_REL:unfolds_in=GO:0005884]) [-9] ! parse: GO:0051639 using "actin gel formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(actin gel, anatomy)]) [-10] ! no existing xp def ! def: "The assembly of a network of actin filaments; actin filaments on different axes and with differing orientations are crosslinked together to form a mesh of filaments." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of anon(network, anatomy) and OBO_REL:unfolds_in actin filament [cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(network, anatomy), OBO_REL:unfolds_in=GO:0005884])] [Term] id: GO:0051639 ! actin filament network formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of anatomy:network intersection_of: OBO_REL:unfolds_in GO:0005884 ! actin filament synonym: "actin filament network anatomical structure formation" EXACT [OBOL:automatic] synonym: "actin filament network formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0051639: 18.47 ! parse: GO:0051640 using "organelle localization" => cdef(GO:0051179, [OBO_REL:results_in_localization_of=GO:0043226]) [-2] ! no existing xp def ! def: "The processes by which an organelle is transported to, and/or maintained in, a specific location." ! PROPOSED: localization that OBO_REL:results_in_localization_of organelle [cdef(GO:0051179, [OBO_REL:results_in_localization_of=GO:0043226])] [Term] id: GO:0051640 ! organelle localization intersection_of: GO:0051179 ! localization intersection_of: OBO_REL:results_in_localization_of GO:0043226 ! organelle ! seconds spent parsing GO:0051640: 11.0 ! Already have xp for: GO:0051641 cellular localization ! CURRENT : localization that OBO_REL:part_of cellularization [cdef(GO:0051179, [OBO_REL:part_of=GO:0007349])] ! parse: GO:0051642 using "centrosome localization" => cdef(GO:0051179, [OBO_REL:results_in_localization_of=GO:0005813]) [-2] ! no existing xp def ! def: "The processes by which a centrosome is transported to, and/or maintained in, a specific location within the cell." ! PROPOSED: localization that OBO_REL:results_in_localization_of centrosome [cdef(GO:0051179, [OBO_REL:results_in_localization_of=GO:0005813])] [Term] id: GO:0051642 ! centrosome localization intersection_of: GO:0051179 ! localization intersection_of: OBO_REL:results_in_localization_of GO:0005813 ! centrosome ! seconds spent parsing GO:0051642: 10.94 ! parse: GO:0051644 using "plastid localization" => cdef(GO:0051179, [OBO_REL:results_in_localization_of=GO:0009536]) [-2] ! no existing xp def ! def: "The processes by which a plastid is transported to, and/or maintained in, a specific location within the cell." ! PROPOSED: localization that OBO_REL:results_in_localization_of plastid [cdef(GO:0051179, [OBO_REL:results_in_localization_of=GO:0009536])] [Term] id: GO:0051644 ! plastid localization intersection_of: GO:0051179 ! localization intersection_of: OBO_REL:results_in_localization_of GO:0009536 ! plastid ! seconds spent parsing GO:0051644: 10.98 ! parse: GO:0051645 using "Golgi apparatus localization" => cdef(GO:0051179, [OBO_REL:results_in_localization_of=GO:0005794]) [-2] ! parse: GO:0051645 using "Golgi body localization" => cdef(GO:0051179, [OBO_REL:results_in_localization_of=MA:0000004, OBO_REL:unfolds_in=GO:0005794]) [-3] ! parse: GO:0051645 using "Golgi localization" => cdef(GO:0051179, [OBO_REL:results_in_localization_of=GO:0005794]) [-2] ! no existing xp def ! def: "The processes by which the Golgi is transported to, and/or maintained in, a specific location within the cell." ! PROPOSED: localization that OBO_REL:results_in_localization_of Golgi apparatus [cdef(GO:0051179, [OBO_REL:results_in_localization_of=GO:0005794])] [Term] id: GO:0051645 ! Golgi localization intersection_of: GO:0051179 ! localization intersection_of: OBO_REL:results_in_localization_of GO:0005794 ! Golgi apparatus synonym: "Golgi apparatus establishment and maintenance of localization" EXACT [OBOL:automatic] synonym: "Golgi apparatus establishment and maintenance of position" EXACT [OBOL:automatic] synonym: "Golgi complex establishment and maintenance of localization" EXACT [OBOL:automatic] synonym: "Golgi complex establishment and maintenance of position" EXACT [OBOL:automatic] synonym: "Golgi complex localization" EXACT [OBOL:automatic] ! seconds spent parsing GO:0051645: 33.9 ! parse: GO:0051646 using "mitochondria localization" => cdef(GO:0051179, [OBO_REL:results_in_localization_of=GO:0005739]) [-2] ! parse: GO:0051646 using "mitochondrion localization" => cdef(GO:0051179, [OBO_REL:results_in_localization_of=GO:0005739]) [-2] ! no existing xp def ! def: "The processes by which a mitochondrion or mitochondria are transported to, and/or maintained in, a specific location within the cell." ! PROPOSED: localization that OBO_REL:results_in_localization_of mitochondrion [cdef(GO:0051179, [OBO_REL:results_in_localization_of=GO:0005739])] [Term] id: GO:0051646 ! mitochondrion localization intersection_of: GO:0051179 ! localization intersection_of: OBO_REL:results_in_localization_of GO:0005739 ! mitochondrion ! seconds spent parsing GO:0051646: 35.41 ! parse: GO:0051647 using "nucleus localization" => cdef(GO:0051179, [OBO_REL:results_in_localization_of=GO:0005634]) [-2] ! no existing xp def ! def: "The processes by which the nucleus is transported to, and/or maintained in, a specific location within the cell." ! PROPOSED: localization that OBO_REL:results_in_localization_of nucleus [cdef(GO:0051179, [OBO_REL:results_in_localization_of=GO:0005634])] [Term] id: GO:0051647 ! nucleus localization intersection_of: GO:0051179 ! localization intersection_of: OBO_REL:results_in_localization_of GO:0005634 ! nucleus ! seconds spent parsing GO:0051647: 4.94 ! parse: GO:0051648 using "cytoplasmic vesicle localization" => cdef(GO:0051179, [OBO_REL:results_in_localization_of=GO:0031410]) [-2] ! parse: GO:0051648 using "vesicle localization" => cdef(GO:0051179, [OBO_REL:results_in_localization_of=GO:0031982]) [-2] ! no existing xp def ! def: "The processes by which a vesicle or vesicles are transported to, and/or maintained in, a specific location." ! PROPOSED: localization that OBO_REL:results_in_localization_of vesicle [cdef(GO:0051179, [OBO_REL:results_in_localization_of=GO:0031982])] [Term] id: GO:0051648 ! vesicle localization intersection_of: GO:0051179 ! localization intersection_of: OBO_REL:results_in_localization_of GO:0031982 ! vesicle ! seconds spent parsing GO:0051648: 17.2 ! No parse for: GO:0051651 maintenance of cellular localization ! parse: GO:0051653 using "spindle localization" => cdef(GO:0051179, [OBO_REL:results_in_localization_of=GO:0005819]) [-2] ! no existing xp def ! def: "The processes by which is the spindle is transported to, and/or maintained in, a specific location." ! PROPOSED: localization that OBO_REL:results_in_localization_of spindle [cdef(GO:0051179, [OBO_REL:results_in_localization_of=GO:0005819])] [Term] id: GO:0051653 ! spindle localization intersection_of: GO:0051179 ! localization intersection_of: OBO_REL:results_in_localization_of GO:0005819 ! spindle ! seconds spent parsing GO:0051653: 4.86 ! parse: GO:0051654 using "establishment of mitochondria localization" => cdef(GO:0051179, [OBO_REL:results_in_localization_of=GO:0005739, OBO_REL:unfolds_in=cell:establishment_of]) [-3] ! parse: GO:0051654 using "establishment of mitochondria localization" => cdef(GO:0051646, [OBO_REL:results_in_localization_of=cell:establishment_of]) [-2] ! parse: GO:0051654 using "establishment of mitochondrion localization" => cdef(GO:0051179, [OBO_REL:results_in_localization_of=GO:0005739, OBO_REL:unfolds_in=cell:establishment_of]) [-3] ! parse: GO:0051654 using "establishment of mitochondrion localization" => cdef(GO:0051646, [OBO_REL:results_in_localization_of=cell:establishment_of]) [-2] ! no existing xp def ! def: "The directed movement of the mitochondrion to a specific location." ! PROPOSED: mitochondrion localization that OBO_REL:results_in_localization_of establishment of [cdef(GO:0051646, [OBO_REL:results_in_localization_of=cell:establishment_of])] [Term] id: GO:0051654 ! establishment of mitochondrion localization intersection_of: GO:0051646 ! mitochondrion localization intersection_of: OBO_REL:results_in_localization_of cell:establishment_of ! establishment of ! seconds spent parsing GO:0051654: 25.43 ! parse: GO:0051660 using "establishment of centrosome localization" => cdef(GO:0051179, [OBO_REL:results_in_localization_of=GO:0005813, OBO_REL:unfolds_in=cell:establishment_of]) [-3] ! parse: GO:0051660 using "establishment of centrosome localization" => cdef(GO:0051642, [OBO_REL:results_in_localization_of=cell:establishment_of]) [-2] ! no existing xp def ! def: "The directed movement of the centrosome to a specific location." ! PROPOSED: centrosome localization that OBO_REL:results_in_localization_of establishment of [cdef(GO:0051642, [OBO_REL:results_in_localization_of=cell:establishment_of])] [Term] id: GO:0051660 ! establishment of centrosome localization intersection_of: GO:0051642 ! centrosome localization intersection_of: OBO_REL:results_in_localization_of cell:establishment_of ! establishment of ! seconds spent parsing GO:0051660: 12.67 ! Already have xp for: GO:0051663 oocyte nucleus localization during oocyte axis determination ! CURRENT : oocyte_nucleus_localization that OBO_REL:part_of oocyte axis determination [cdef(oocyte_nucleus_localization, [OBO_REL:part_of=GO:0007309])] ! parse: GO:0051664 using "nuclear pore localization" => cdef(GO:0051179, [OBO_REL:results_in_localization_of=GO:0005643]) [-2] ! no existing xp def ! def: "The processes by which nuclear pores are transported to, or maintained in, a specific location." ! PROPOSED: localization that OBO_REL:results_in_localization_of nuclear pore [cdef(GO:0051179, [OBO_REL:results_in_localization_of=GO:0005643])] [Term] id: GO:0051664 ! nuclear pore localization intersection_of: GO:0051179 ! localization intersection_of: OBO_REL:results_in_localization_of GO:0005643 ! nuclear pore ! seconds spent parsing GO:0051664: 11.02 ! parse: GO:0051665 using "lipid raft localization" => cdef(GO:0051179, [OBO_REL:results_in_localization_of=GO:0045121]) [-2] ! no existing xp def ! def: "The processes by which lipid rafts are transported to, or maintained in, a specific location. Lipid rafts are tightly-packed gel-like membrane microdomains enriched in sphingolipids and cholesterol." ! PROPOSED: localization that OBO_REL:results_in_localization_of lipid raft [cdef(GO:0051179, [OBO_REL:results_in_localization_of=GO:0045121])] [Term] id: GO:0051665 ! lipid raft localization intersection_of: GO:0051179 ! localization intersection_of: OBO_REL:results_in_localization_of GO:0045121 ! lipid raft ! seconds spent parsing GO:0051665: 10.9 ! parse: GO:0051666 using "actin cortical patch localization" => cdef(GO:0051179, [OBO_REL:results_in_localization_of=GO:0030479]) [-2] ! no existing xp def ! def: "The processes by which actin cortical patches are transported to, or maintained in, a specific location. An actin cortical patch is a discrete actin-containing structure found just beneath the plasma membrane in fungal cells." ! PROPOSED: localization that OBO_REL:results_in_localization_of actin cortical patch [cdef(GO:0051179, [OBO_REL:results_in_localization_of=GO:0030479])] [Term] id: GO:0051666 ! actin cortical patch localization intersection_of: GO:0051179 ! localization intersection_of: OBO_REL:results_in_localization_of GO:0030479 ! actin cortical patch synonym: "actin cortical patch (sensu Fungi) establishment and maintenance of localization" EXACT [OBOL:automatic] synonym: "actin cortical patch (sensu Fungi) establishment and maintenance of position" EXACT [OBOL:automatic] synonym: "actin cortical patch (sensu Fungi) localization" EXACT [OBOL:automatic] synonym: "actin patch establishment and maintenance of localization" EXACT [OBOL:automatic] synonym: "actin patch establishment and maintenance of position" EXACT [OBOL:automatic] synonym: "actin patch localization" EXACT [OBOL:automatic] ! seconds spent parsing GO:0051666: 10.96 ! No parse for: GO:0051672 cell wall peptidoglycan catabolic process in another organism ! No parse for: GO:0051673 membrane disruption in another organism ! parse: GO:0051674 using "cell localization" => cdef(GO:0051179, [OBO_REL:results_in_localization_of=CL:0000000]) [-2] ! parse: GO:0051674 using "cell localization" => cdef(GO:0051179, [OBO_REL:results_in_localization_of=ZFA:0009000]) [-2] ! no existing xp def ! def: "The processes by which a cell is transported to, and/or maintained in, a specific location." ! PROPOSED: localization that OBO_REL:results_in_localization_of cell [cdef(GO:0051179, [OBO_REL:results_in_localization_of=ZFA:0009000])] [Term] id: GO:0051674 ! localization of cell intersection_of: GO:0051179 ! localization intersection_of: OBO_REL:results_in_localization_of ZFA:0009000 ! cell ! seconds spent parsing GO:0051674: 24.41 ! No parse for: GO:0051689 multicellular organismal oligosaccharide catabolic process ! No parse for: GO:0051690 multicellular organismal oligosaccharide metabolic process ! Already have xp for: GO:0051691 cellular oligosaccharide metabolic process ! CURRENT : oligosaccharide metabolic process that OBO_REL:part_of cellularization [cdef(GO:0009311, [OBO_REL:part_of=GO:0007349])] ! Already have xp for: GO:0051692 cellular oligosaccharide catabolic process ! CURRENT : oligosaccharide catabolic process that OBO_REL:part_of cellularization [cdef(GO:0009313, [OBO_REL:part_of=GO:0007349])] ! No parse for: GO:0051693 actin filament capping ! No parse for: GO:0051695 actin filament uncapping ! No parse for: GO:0051708 intracellular protein transport in other organism during symbiotic interaction ! Already have xp for: GO:0051716 cellular response to stimulus ! CURRENT : response to stimulus that OBO_REL:part_of cellularization [cdef(GO:0050896, [OBO_REL:part_of=GO:0007349])] ! No parse for: GO:0051725 protein amino acid de-ADP-ribosylation ! Already have xp for: GO:0051726 regulation of cell cycle ! CURRENT : biological regulation that OBO_REL:regulates cell cycle and regulates cell cycle [cdef(GO:0065007, [OBO_REL:regulates=GO:0007049, regulates=GO:0007049])] ! No parse for: GO:0051727 cell cycle switching, meiotic to mitotic cell cycle ! No parse for: GO:0051728 cell cycle switching, mitotic to meiotic cell cycle ! No parse for: GO:0051729 germline cell cycle switching, mitotic to meiotic cell cycle ! parse: GO:0051875 using "pigment granule localization" => cdef(GO:0051179, [OBO_REL:results_in_localization_of=FBbt:00004234]) [-2] ! parse: GO:0051875 using "pigment granule localization" => cdef(GO:0051179, [OBO_REL:results_in_localization_of=GO:0048770]) [-2] ! no existing xp def ! def: "The processes by which a pigment granule is transported to, and/or maintained in, a specific location within the cell." ! PROPOSED: localization that OBO_REL:results_in_localization_of pigment granule [cdef(GO:0051179, [OBO_REL:results_in_localization_of=GO:0048770])] [Term] id: GO:0051875 ! pigment granule localization intersection_of: GO:0051179 ! localization intersection_of: OBO_REL:results_in_localization_of GO:0048770 ! pigment granule ! seconds spent parsing GO:0051875: 7.31 ! No parse for: GO:0051876 pigment granule dispersal ! No parse for: GO:0051877 pigment granule aggregation in cell center ! parse: GO:0051878 using "lateral element assembly" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0000800]) [-2] ! no existing xp def ! def: "The cell cycle process whereby lateral elements are formed. Axial elements form a proteinaceous core between the two sister chromatids of each chromosome; the two axial elements then connect along their entire lengths by fine fibers known as transverse filaments, forming the lateral elements." ! PROPOSED: cellular component assembly that OBO_REL:results_in_creation_of lateral element [cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0000800])] [Term] id: GO:0051878 ! lateral element assembly intersection_of: GO:0022607 ! cellular component assembly intersection_of: OBO_REL:results_in_creation_of GO:0000800 ! lateral element synonym: "assembly and maintenance of axial element" EXACT [OBOL:automatic] synonym: "assembly and maintenance of lateral element" EXACT [OBOL:automatic] synonym: "assembly of axial element" EXACT [OBOL:automatic] synonym: "assembly of lateral element" EXACT [OBOL:automatic] synonym: "axial element assembly" EXACT [OBOL:automatic] synonym: "axial element assembly and maintenance" EXACT [OBOL:automatic] synonym: "axial element biogenesis" EXACT [OBOL:automatic] synonym: "axial element biogenesis and assembly" EXACT [OBOL:automatic] synonym: "axial element cell structure assembly" EXACT [OBOL:automatic] synonym: "axial element cellular component assembly" EXACT [OBOL:automatic] synonym: "axial element complex assembly" EXACT [OBOL:automatic] synonym: "axial element formation" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of axial element" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of lateral element" EXACT [OBOL:automatic] synonym: "biogenesis of axial element" EXACT [OBOL:automatic] synonym: "biogenesis of lateral element" EXACT [OBOL:automatic] synonym: "cell structure assembly of axial element" EXACT [OBOL:automatic] synonym: "cell structure assembly of lateral element" EXACT [OBOL:automatic] synonym: "cellular component assembly of axial element" EXACT [OBOL:automatic] synonym: "cellular component assembly of lateral element" EXACT [OBOL:automatic] synonym: "complex assembly of axial element" EXACT [OBOL:automatic] synonym: "complex assembly of lateral element" EXACT [OBOL:automatic] synonym: "formation of axial element" EXACT [OBOL:automatic] synonym: "formation of lateral element" EXACT [OBOL:automatic] synonym: "lateral element assembly and maintenance" EXACT [OBOL:automatic] synonym: "lateral element biogenesis" EXACT [OBOL:automatic] synonym: "lateral element biogenesis and assembly" EXACT [OBOL:automatic] synonym: "lateral element cell structure assembly" EXACT [OBOL:automatic] synonym: "lateral element cellular component assembly" EXACT [OBOL:automatic] synonym: "lateral element complex assembly" EXACT [OBOL:automatic] synonym: "lateral element formation" EXACT [OBOL:automatic] def: "The aggregation and bonding together of a set of macromolecules to form a axial element" [OBOL:automatic] ! seconds spent parsing GO:0051878: 6.0 ! No parse for: GO:0051882 mitochondrial depolarization ! No parse for: GO:0051899 membrane depolarization ! parse: GO:0051904 using "pigment granule transport" => cdef(GO:0006810, [OBO_REL:results_in_transport_of=FBbt:00004234]) [-2] ! parse: GO:0051904 using "pigment granule transport" => cdef(GO:0006810, [OBO_REL:results_in_transport_of=GO:0048770]) [-2] ! no existing xp def ! def: "The directed movement of pigment granules into, out of, within or between cells." ! PROPOSED: transport that OBO_REL:results_in_transport_of pigment granule [cdef(GO:0006810, [OBO_REL:results_in_transport_of=GO:0048770])] [Term] id: GO:0051904 ! pigment granule transport intersection_of: GO:0006810 ! transport intersection_of: OBO_REL:results_in_transport_of GO:0048770 ! pigment granule ! seconds spent parsing GO:0051904: 6.36 ! No parse for: GO:0051972 regulation of telomerase activity ! No parse for: GO:0051973 positive regulation of telomerase activity ! No parse for: GO:0051974 negative regulation of telomerase activity ! No parse for: GO:0052061 evasion or tolerance by symbiont of host-produced phytoalexins ! parse: GO:0052324 using "cell wall cellulose biosynthesis" => cdef(GO:0030244, [OBO_REL:results_in_creation_of=GO:0005618]) [-2] ! parse: GO:0052324 using "cellulose biosynthesis during cell wall biosynthesis" => cdef(GO:0030244, [OBO_REL:part_of=GO:0042546]) [-2] ! parse: GO:0052324 using "cellulose biosynthesis during cell wall biosynthesis" => cdef(GO:0030244, [OBO_REL:part_of=cdef(GO:0009058, [OBO_REL:results_in_creation_of=GO:0005618])]) [-3] ! no existing xp def ! def: "The chemical reactions and pathways resulting in the formation of cellulose, a linear beta1-4 glucan of molecular mass 50-400 kDa with the pyranose units in the -4C1 conformation, as part of the organization and biogenesis of the cell wall." ! PROPOSED: cellulose biosynthetic process that OBO_REL:results_in_creation_of cell wall [cdef(GO:0030244, [OBO_REL:results_in_creation_of=GO:0005618])] [Term] id: GO:0052324 ! cell wall cellulose biosynthesic process intersection_of: GO:0030244 ! cellulose biosynthetic process intersection_of: OBO_REL:results_in_creation_of GO:0005618 ! cell wall def: "The aggregation and bonding together of a set of macromolecules to form a cell wall" [OBOL:automatic] ! seconds spent parsing GO:0052324: 35.24 ! Already have xp for: GO:0052325 cell wall pectin biosynthetic process ! CURRENT : pectin biosynthetic process that OBO_REL:part_of cell wall organization and biogenesis [cdef(GO:0045489, [OBO_REL:part_of=GO:0007047])] ! No parse for: GO:0052386 cell wall thickening ! Already have xp for: GO:0052482 cell wall thickening during defense response ! CURRENT : cell wall thickening that OBO_REL:part_of defense response [cdef(GO:0052386, [OBO_REL:part_of=GO:0006952])] ! No parse for: GO:0052541 cellulose and pectin-containing cell wall cellulose metabolic process ! parse: GO:0052543 using "callose localization in cell wall" => cdef(GO:0052545, [OBO_REL:unfolds_in=GO:0005618]) [-2] ! parse: GO:0052543 using "cell wall callose localization" => cdef(GO:0052545, [OBO_REL:results_in_localization_of=GO:0005618]) [-2] ! no existing xp def ! def: "The processes by which callose is transported to, and/or maintained in, the cell wall. Callose is a linear 1,3-beta-d-glucan formed from UDP-glucose and is found in certain plant cell walls." ! PROPOSED: callose localization that OBO_REL:unfolds_in cell wall [cdef(GO:0052545, [OBO_REL:unfolds_in=GO:0005618])] [Term] id: GO:0052543 ! callose deposition in cell wall intersection_of: GO:0052545 ! callose localization intersection_of: OBO_REL:unfolds_in GO:0005618 ! cell wall ! seconds spent parsing GO:0052543: 44.06 ! Already have xp for: GO:0052544 callose deposition in cell wall during defense response ! CURRENT : callose deposition in cell wall that OBO_REL:part_of defense response [cdef(GO:0052543, [OBO_REL:part_of=GO:0006952])] ! Already have xp for: GO:0052546 cellulose and pectin-containing cell wall pectin metabolic process ! CURRENT : pectin metabolic process that OBO_REL:part_of cell wall organization and biogenesis [cdef(GO:0045488, [OBO_REL:part_of=GO:0007047])] ! No parse for: GO:0052548 regulation of protease activity ! Already have xp for: GO:0055001 muscle cell development ! CURRENT : developmental process that OBO_REL:results_in_developmental_progression_of muscle cell [cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=CL:0000187])] ! Already have xp for: GO:0055002 striated muscle cell development ! CURRENT : developmental process that OBO_REL:results_in_developmental_progression_of striated muscle cell [cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=CL:0000737])] ! No relation defined: results_in_complete_developmental_of ! parse: GO:0055003 using "cardiac myofibril development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(cardiac myofibril, anatomy)]) [-18] ! parse: GO:0055003 using "cardiac myofibril morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(cardiac myofibril, anatomy)]) [-18] ! parse: GO:0055003 using "heart myofibril assembly" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0030016, OBO_REL:unfolds_in=MA:0000072]) [-3] ! parse: GO:0055003 using "heart myofibril assembly" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0030016, OBO_REL:unfolds_in=ZFA:0000114]) [-3] ! no existing xp def ! def: "The process whose specific outcome is the progression of the cardiac myofibril over time, from its formation to the mature structure. A cardiac myofibril is a myofibril specific to cardiac muscle cells." ! PROPOSED: cellular component assembly that OBO_REL:results_in_creation_of myofibril and OBO_REL:unfolds_in heart [cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0030016, OBO_REL:unfolds_in=ZFA:0000114])] [Term] id: GO:0055003 ! cardiac myofibril assembly intersection_of: GO:0022607 ! cellular component assembly intersection_of: OBO_REL:results_in_creation_of GO:0030016 ! myofibril intersection_of: OBO_REL:unfolds_in ZFA:0000114 ! heart ! seconds spent parsing GO:0055003: 20.68 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0055005 using "ventricular cardiac myofibril development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(ventricular cardiac myofibril, anatomy)]) [-30] ! parse: GO:0055005 using "ventricular heart myofibril development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(ventricular heart myofibril, anatomy)]) [-28] ! no existing xp def ! def: "The process whose specific outcome is the progression of the ventricular cardiac myofibril over time, from its formation to the mature structure. A cardiac myofibril is a myofibril specific to cardiac muscle cells." ! PROPOSED: developmental process that results_in_complete_developmental_of anon(ventricular heart myofibril, anatomy) [cdef(GO:0032502, [results_in_complete_developmental_of=anon(ventricular heart myofibril, anatomy)])] [Term] id: GO:0055005 ! ventricular cardiac myofibril development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of anatomy:ventricular_heart_myofibril ! seconds spent parsing GO:0055005: 9.07 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0055006 using "cardiac cell development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(cardiac cell, anatomy)]) [-13] ! parse: GO:0055006 using "heart cell development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=CL:0000000, OBO_REL:unfolds_in=MA:0000072]) [-3] ! parse: GO:0055006 using "heart cell development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=CL:0000000, OBO_REL:unfolds_in=ZFA:0000114]) [-3] ! parse: GO:0055006 using "heart cell development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=ZFA:0009000, OBO_REL:unfolds_in=MA:0000072]) [-3] ! parse: GO:0055006 using "heart cell development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=ZFA:0009000, OBO_REL:unfolds_in=ZFA:0000114]) [-3] ! parse: GO:0055006 using "heart cell development" => cdef(GO:0032502, [results_in_complete_developmental_of=CL:0000000, OBO_REL:unfolds_in=MA:0000072]) [-3] ! parse: GO:0055006 using "heart cell development" => cdef(GO:0032502, [results_in_complete_developmental_of=CL:0000000, OBO_REL:unfolds_in=ZFA:0000114]) [-3] ! parse: GO:0055006 using "heart cell development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0009000, OBO_REL:unfolds_in=MA:0000072]) [-3] ! parse: GO:0055006 using "heart cell development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0009000, OBO_REL:unfolds_in=ZFA:0000114]) [-3] ! parse: GO:0055006 using "heart cell development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(ZFA:0009000, [OBO_REL:part_of=MA:0000072])]) [-3] ! parse: GO:0055006 using "heart cell development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(ZFA:0009000, [OBO_REL:part_of=ZFA:0000114])]) [-3] ! no existing xp def ! def: "The process whose specific outcome is the progression of a cardiac cell over time, from its formation to the mature state. A cardiac cell is a cell that will form part of the cardiac organ of an individual." ! PROPOSED: developmental process that results_in_complete_developmental_of cdef(ZFA:0009000, [OBO_REL:part_of=ZFA:0000114]) [cdef(GO:0032502, [results_in_complete_developmental_of=cdef(ZFA:0009000, [OBO_REL:part_of=ZFA:0000114])])] [Term] id: GO:0055006 ! cardiac cell development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of heart_cell synonym: "cell of heart development" EXACT [OBOL:automatic] synonym: "cell of the heart development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0055006: 16.85 ! Already have xp for: GO:0055007 cardiac muscle cell differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of cardiac muscle cell [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000746])] ! No parse for: GO:0055008 cardiac muscle morphogensis ! parse: GO:0055009 using "atrial cardiac muscle morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(atrial cardiac muscle, anatomy)]) [-22] ! parse: GO:0055009 using "atrial cardiac muscle morphogenesis" => cdef(GO:0048644, [OBO_REL:results_in_developmental_progression_of=anon(atrial cardiac, anatomy)]) [-15] ! parse: GO:0055009 using "atrial heart muscle morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(atrial heart muscle, anatomy)]) [-20] ! parse: GO:0055009 using "atrial heart muscle morphogenesis" => cdef(GO:0048644, [OBO_REL:results_in_developmental_progression_of=anon(atrial heart, anatomy)]) [-13] ! parse: GO:0055009 using "cardiac atrium muscle morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(cardiac atrium muscle, anatomy)]) [-22] ! parse: GO:0055009 using "cardiac atrium muscle morphogenesis" => cdef(GO:0048644, [OBO_REL:results_in_developmental_progression_of=anon(cardiac atrium, anatomy)]) [-15] ! no existing xp def ! def: "The process by which the anatomical structure of cardiac atrium muscle is generated and organized. Morphogenesis pertains to the creation of form." ! PROPOSED: muscle morphogenesis that OBO_REL:results_in_developmental_progression_of anon(atrial heart, anatomy) [cdef(GO:0048644, [OBO_REL:results_in_developmental_progression_of=anon(atrial heart, anatomy)])] [Term] id: GO:0055009 ! atrial cardiac muscle morphogenesis intersection_of: GO:0048644 ! muscle morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of anatomy:atrial_heart ! seconds spent parsing GO:0055009: 14.98 ! parse: GO:0055010 using "atrial cardiomyocyte differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(atrial cardiomyocyte, cell)]) [-21] ! parse: GO:0055010 using "atrial cardiomyocyte differentiation" => cdef(GO:0055007, [OBO_REL:results_in_acquisition_of_features_of=anon(atrial, cell)]) [-7] ! parse: GO:0055010 using "atrial cardiomyocyte differentiation" => cdef(GO:0055007, [OBO_REL:results_in_developmental_progression_of=anon(atrial, anatomy)]) [-7] ! parse: GO:0055010 using "cardiac ventricle muscle morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=MA:0000015, OBO_REL:unfolds_in=ZFA:0000009]) [-3] ! parse: GO:0055010 using "cardiac ventricle muscle morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=ZFA:0000548, OBO_REL:unfolds_in=ZFA:0000009]) [-3] ! parse: GO:0055010 using "cardiac ventricle muscle morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=cdef(MA:0000015, [OBO_REL:part_of=ZFA:0000009])]) [-3] ! parse: GO:0055010 using "cardiac ventricle muscle morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=cdef(ZFA:0000548, [OBO_REL:part_of=ZFA:0000009])]) [-3] ! parse: GO:0055010 using "cardiac ventricle muscle morphogenesis" => cdef(GO:0048644, [OBO_REL:results_in_developmental_progression_of=ZFA:0000009]) [-2] ! parse: GO:0055010 using "ventricular cardiac muscle morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(ventricular cardiac muscle, anatomy)]) [-27] ! parse: GO:0055010 using "ventricular cardiac muscle morphogenesis" => cdef(GO:0048644, [OBO_REL:results_in_developmental_progression_of=anon(ventricular cardiac, anatomy)]) [-20] ! parse: GO:0055010 using "ventricular heart muscle morphogenesis" => cdef(GO:0009653, [OBO_REL:results_in_developmental_progression_of=anon(ventricular heart muscle, anatomy)]) [-25] ! parse: GO:0055010 using "ventricular heart muscle morphogenesis" => cdef(GO:0048644, [OBO_REL:results_in_developmental_progression_of=anon(ventricular heart, anatomy)]) [-18] ! no existing xp def ! def: "The process by which the anatomical structures of cardiac ventricle muscle is generated and organized. Morphogenesis pertains to the creation of form." ! PROPOSED: muscle morphogenesis that OBO_REL:results_in_developmental_progression_of cardiac ventricle [cdef(GO:0048644, [OBO_REL:results_in_developmental_progression_of=ZFA:0000009])] [Term] id: GO:0055010 ! ventricular cardiac muscle morphogenesis intersection_of: GO:0048644 ! muscle morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0000009 ! cardiac ventricle synonym: "ventricle muscle morphogenesis" EXACT [OBOL:automatic] ! seconds spent parsing GO:0055010: 22.37 ! parse: GO:0055012 using "ventricular cardiac muscle cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(ventricular cardiac muscle, cell)]) [-27] ! parse: GO:0055012 using "ventricular cardiac muscle cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(ventricular cardiac muscle cell, cell)]) [-32] ! parse: GO:0055012 using "ventricular cardiac muscle cell differentiation" => cdef(GO:0042692, [OBO_REL:results_in_acquisition_of_features_of=anon(ventricular cardiac, cell)]) [-20] ! parse: GO:0055012 using "ventricular cardiac muscle cell differentiation" => cdef(GO:0042692, [OBO_REL:results_in_developmental_progression_of=anon(ventricular cardiac, anatomy)]) [-20] ! parse: GO:0055012 using "ventricular cardiac muscle cell differentiation" => cdef(GO:0055007, [OBO_REL:results_in_acquisition_of_features_of=anon(ventricular, cell)]) [-12] ! parse: GO:0055012 using "ventricular cardiac muscle cell differentiation" => cdef(GO:0055007, [OBO_REL:results_in_developmental_progression_of=anon(ventricular, anatomy)]) [-12] ! parse: GO:0055012 using "ventricular cardiomyocyte differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(ventricular cardiomyocyte, cell)]) [-26] ! parse: GO:0055012 using "ventricular cardiomyocyte differentiation" => cdef(GO:0055007, [OBO_REL:results_in_acquisition_of_features_of=anon(ventricular, cell)]) [-12] ! parse: GO:0055012 using "ventricular cardiomyocyte differentiation" => cdef(GO:0055007, [OBO_REL:results_in_developmental_progression_of=anon(ventricular, anatomy)]) [-12] ! parse: GO:0055012 using "ventricular heart muscle cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(ventricular heart muscle, cell)]) [-25] ! parse: GO:0055012 using "ventricular heart muscle cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(ventricular heart muscle cell, cell)]) [-30] ! parse: GO:0055012 using "ventricular heart muscle cell differentiation" => cdef(GO:0042692, [OBO_REL:results_in_acquisition_of_features_of=anon(ventricular heart, cell)]) [-18] ! parse: GO:0055012 using "ventricular heart muscle cell differentiation" => cdef(GO:0042692, [OBO_REL:results_in_developmental_progression_of=anon(ventricular heart, anatomy)]) [-18] ! parse: GO:0055012 using "ventricular heart muscle cell differentiation" => cdef(GO:0055007, [OBO_REL:results_in_acquisition_of_features_of=anon(ventricular, cell)]) [-12] ! parse: GO:0055012 using "ventricular heart muscle cell differentiation" => cdef(GO:0055007, [OBO_REL:results_in_developmental_progression_of=anon(ventricular, anatomy)]) [-12] ! no existing xp def ! def: "The process whereby a relatively unspecialized cell acquires specialized features of a cardiac muscle cell. Cardiac muscle cells are striated muscle cells that are responsible for heart contraction. The ventricle is the part of the heart that pumps blood away from the organ." ! PROPOSED: cardiac muscle cell differentiation that OBO_REL:results_in_developmental_progression_of anon(ventricular, anatomy) [cdef(GO:0055007, [OBO_REL:results_in_developmental_progression_of=anon(ventricular, anatomy)])] [Term] id: GO:0055012 ! ventricular cardiac muscle cell differentiation intersection_of: GO:0055007 ! cardiac muscle cell differentiation intersection_of: OBO_REL:results_in_developmental_progression_of anatomy:ventricular synonym: "ventricular cardiac muscle cell cell differentiation" EXACT [OBOL:automatic] synonym: "ventricular cardiac myocyte cell differentiation" EXACT [OBOL:automatic] synonym: "ventricular cardiac myocyte differentiation" EXACT [OBOL:automatic] synonym: "ventricular cardiomyocyte cell differentiation" EXACT [OBOL:automatic] ! seconds spent parsing GO:0055012: 17.12 ! Already have xp for: GO:0055013 cardiac muscle cell development ! CURRENT : developmental process that OBO_REL:results_in_developmental_progression_of cardiac muscle cell [cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=CL:0000746])] ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0055015 using "ventricular cardiac muscle cell development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(ventricular cardiac muscle cell, anatomy)]) [-32] ! parse: GO:0055015 using "ventricular cardiomyocyte development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(ventricular cardiomyocyte, anatomy)]) [-26] ! parse: GO:0055015 using "ventricular heart muscle cell development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(ventricular heart muscle cell, anatomy)]) [-30] ! no existing xp def ! def: "The process whose specific outcome is the progression of an atrial cardiac muscle cell over time, from its formation to the mature state. Cardiac muscle cells are striated muscle cells that are responsible for heart contraction. The ventricle is the part of the heart that pumps blood away from the organ." ! PROPOSED: developmental process that results_in_complete_developmental_of anon(ventricular cardiomyocyte, anatomy) [cdef(GO:0032502, [results_in_complete_developmental_of=anon(ventricular cardiomyocyte, anatomy)])] [Term] id: GO:0055015 ! ventricular cardiac muscle cell development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of anatomy:ventricular_cardiomyocyte ! seconds spent parsing GO:0055015: 16.96 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0055016 using "hypochord development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000031]) [-2] ! parse: GO:0055016 using "subnotochordal rod development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(subnotochordal rod, anatomy)]) [-19] ! no existing xp def ! def: "The process whose specific outcome is the progression of the hypochord over time, from its formation to the mature structure. The hypochord is a transient rod-like structure in the embryos of fish, lampreys and amphibians that is located immediately ventral to the notochord. The hypochord may play a role in positioning the dorsal aorta." ! PROPOSED: developmental process that results_in_complete_developmental_of hypochord [cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000031])] [Term] id: GO:0055016 ! hypochord development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of ZFA:0000031 ! hypochord ! seconds spent parsing GO:0055016: 9.05 ! parse: GO:0055017 using "cardiac muscle growth" => cdef(GO:0040007, [OBO_REL:results_in_increase_in_mass_of=MA:0000164]) [-2] ! parse: GO:0055017 using "cardiac muscle growth" => cdef(GO:0040007, [OBO_REL:results_in_increase_in_mass_of=ZFA:0001319]) [-2] ! parse: GO:0055017 using "heart muscle growth" => cdef(GO:0040007, [OBO_REL:results_in_increase_in_mass_of=MA:0000015, OBO_REL:unfolds_in=MA:0000072]) [-3] ! parse: GO:0055017 using "heart muscle growth" => cdef(GO:0040007, [OBO_REL:results_in_increase_in_mass_of=MA:0000015, OBO_REL:unfolds_in=ZFA:0000114]) [-3] ! parse: GO:0055017 using "heart muscle growth" => cdef(GO:0040007, [OBO_REL:results_in_increase_in_mass_of=ZFA:0000548, OBO_REL:unfolds_in=MA:0000072]) [-3] ! parse: GO:0055017 using "heart muscle growth" => cdef(GO:0040007, [OBO_REL:results_in_increase_in_mass_of=ZFA:0000548, OBO_REL:unfolds_in=ZFA:0000114]) [-3] ! parse: GO:0055017 using "heart muscle growth" => cdef(GO:0040007, [OBO_REL:results_in_increase_in_mass_of=cdef(MA:0000015, [OBO_REL:part_of=MA:0000072])]) [-3] ! parse: GO:0055017 using "heart muscle growth" => cdef(GO:0040007, [OBO_REL:results_in_increase_in_mass_of=cdef(MA:0000015, [OBO_REL:part_of=ZFA:0000114])]) [-3] ! parse: GO:0055017 using "heart muscle growth" => cdef(GO:0040007, [OBO_REL:results_in_increase_in_mass_of=cdef(ZFA:0000548, [OBO_REL:part_of=MA:0000072])]) [-3] ! parse: GO:0055017 using "heart muscle growth" => cdef(GO:0040007, [OBO_REL:results_in_increase_in_mass_of=cdef(ZFA:0000548, [OBO_REL:part_of=ZFA:0000114])]) [-3] ! no existing xp def ! def: "The increase in size or mass of a cardiac muscle, where the increase in size or mass has the specific outcome of the progression of the organism over time from one condition to another." ! PROPOSED: growth that OBO_REL:results_in_increase_in_mass_of myocardium [cdef(GO:0040007, [OBO_REL:results_in_increase_in_mass_of=ZFA:0001319])] [Term] id: GO:0055017 ! cardiac muscle growth intersection_of: GO:0040007 ! growth intersection_of: OBO_REL:results_in_increase_in_mass_of ZFA:0001319 ! myocardium synonym: "myocardium growth" EXACT [OBOL:automatic] synonym: "myocardium growth pattern" EXACT [OBOL:automatic] ! seconds spent parsing GO:0055017: 22.81 ! No relation defined: results_in_complete_developmental_of ! parse: GO:0055034 using "Bolwig's organ development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00005805]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the Bolwig's organ over time, from its formation to the mature structure. The larval eye in Drosophila is a relatively simple sensory system composed of Bolwig's organs: two clusters, each composed of 12 photoreceptor cells from which axons extend in a single fascicle to the brain." ! PROPOSED: developmental process that results_in_complete_developmental_of Bolwig's organ [cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00005805])] [Term] id: GO:0055034 ! Bolwig's organ development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of FBbt:00005805 ! Bolwig's organ synonym: "Bolwig ' s organ development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0055034: 5.23 ! No parse for: GO:0055045 antipodal cell degeneration ! No parse for: GO:0055047 generative cell mitosis ! Already have xp for: GO:0060008 Sertoli cell differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of Sertoli cell [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000216])] ! Already have xp for: GO:0060009 Sertoli cell development ! CURRENT : developmental process that OBO_REL:results_in_developmental_progression_of Sertoli cell [cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=CL:0000216])] ! Already have xp for: GO:0060010 Sertoli cell fate commitment ! CURRENT : cell fate commitment that OBO_REL:results_in_commitment_to Sertoli cell [cdef(GO:0045165, [OBO_REL:results_in_commitment_to=CL:0000216])] ! Already have xp for: GO:0060011 Sertoli cell proliferation ! CURRENT : cell proliferation that OBO_REL:increases_population_size_of Sertoli cell [cdef(GO:0008283, [OBO_REL:increases_population_size_of=CL:0000216])] ! Already have xp for: GO:0060014 granulosa cell differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of granulosa cell [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000501])] ! Already have xp for: GO:0060015 granulosa cell fate commitment ! CURRENT : cell fate commitment that OBO_REL:results_in_commitment_to granulosa cell [cdef(GO:0045165, [OBO_REL:results_in_commitment_to=CL:0000501])] ! Already have xp for: GO:0060016 granulosa cell development ! CURRENT : developmental process that OBO_REL:results_in_developmental_progression_of granulosa cell [cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=CL:0000501])] ! No relation defined: results_in_complete_developmental_of ! parse: GO:0060017 using "parathyroid gland development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000128]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the parathyroid gland over time, from its formation to the mature structure. The parathyroid gland is an organ specialised for secretion of parathyroid hormone." ! PROPOSED: developmental process that results_in_complete_developmental_of parathyroid gland [cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000128])] [Term] id: GO:0060017 ! parathyroid gland development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of MA:0000128 ! parathyroid gland ! seconds spent parsing GO:0060017: 4.85 ! Already have xp for: GO:0060018 astrocyte fate commitment ! CURRENT : cell fate commitment that OBO_REL:results_in_commitment_to astrocyte [cdef(GO:0045165, [OBO_REL:results_in_commitment_to=CL:0000127])] ! Already have xp for: GO:0060019 radial glial cell differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of radial glial cell [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000681])] ! Already have xp for: GO:0060020 Bergmann glial cell differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of Bergmann glial cell [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000644])] ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0060021 using "palate development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0002476]) [-2] ! parse: GO:0060021 using "palatum development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(palatum, anatomy)]) [-8] ! no existing xp def ! def: "The biological process whose specific outcome is the progression of the palate from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure. The palate is the partition that separates the nasal and oral cavities." ! PROPOSED: developmental process that results_in_complete_developmental_of palate [cdef(GO:0032502, [results_in_complete_developmental_of=MA:0002476])] [Term] id: GO:0060021 ! palate development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of MA:0002476 ! palate ! seconds spent parsing GO:0060021: 9.06 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0060022 using "hard palate development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0002477]) [-2] ! parse: GO:0060022 using "palatum durum development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(palatum durum, anatomy)]) [-14] ! no existing xp def ! def: "The biological process whose specific outcome is the progression of the hard palate from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure, whatever form that may be including its natural destruction. The hard palate is the anterior portion of the palate consisting of bone and mucous membranes." ! PROPOSED: developmental process that results_in_complete_developmental_of hard palate [cdef(GO:0032502, [results_in_complete_developmental_of=MA:0002477])] [Term] id: GO:0060022 ! hard palate development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of MA:0002477 ! hard palate ! seconds spent parsing GO:0060022: 9.26 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0060023 using "palatum molle development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(palatum molle, anatomy)]) [-14] ! parse: GO:0060023 using "soft palate development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0002412]) [-2] ! parse: GO:0060023 using "velum palatum development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(velum palatum, anatomy)]) [-14] ! parse: GO:0060023 using "velum palatum development" => cdef(GO:0060021, [OBO_REL:results_in_developmental_progression_of=anon(velum, anatomy)]) [-6] ! no existing xp def ! def: "The biological process whose specific outcome is the progression of the soft palate from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure, whatever form that may be including its natural destruction. The soft palate is the posterior portion of the palate extending from the posterior edge of the hard palate." ! PROPOSED: developmental process that results_in_complete_developmental_of soft palate [cdef(GO:0032502, [results_in_complete_developmental_of=MA:0002412])] [Term] id: GO:0060023 ! soft palate development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of MA:0002412 ! soft palate ! seconds spent parsing GO:0060023: 13.61 ! No parse for: GO:0060032 notochord regression ! No parse for: GO:0060033 anatomical structure regression ! parse: GO:0060034 using "notochord cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000000, OBO_REL:unfolds_in=ZFA:0000135]) [-3] ! parse: GO:0060034 using "notochord cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(notochord, cell)]) [-10] ! parse: GO:0060034 using "notochord cell differentiation" => cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=anon(notochord cell, cell)]) [-15] ! no existing xp def ! def: "The process whereby relatively unspecialized cells acquire specialized structural and/or functional features cells that make up the notochord. Differentiation includes the processes involved in commitment of a cell to a notochord cell fate." ! PROPOSED: cell differentiation that OBO_REL:results_in_acquisition_of_features_of cell and OBO_REL:unfolds_in notochord [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000000, OBO_REL:unfolds_in=ZFA:0000135])] [Term] id: GO:0060034 ! notochord cell differentiation intersection_of: GO:0030154 ! cell differentiation intersection_of: OBO_REL:results_in_acquisition_of_features_of CL:0000000 ! cell intersection_of: OBO_REL:unfolds_in ZFA:0000135 ! notochord ! seconds spent parsing GO:0060034: 7.99 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0060035 using "notochord cell development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=CL:0000000, OBO_REL:unfolds_in=ZFA:0000135]) [-3] ! parse: GO:0060035 using "notochord cell development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=ZFA:0009000, OBO_REL:unfolds_in=ZFA:0000135]) [-3] ! parse: GO:0060035 using "notochord cell development" => cdef(GO:0032502, [results_in_complete_developmental_of=CL:0000000, OBO_REL:unfolds_in=ZFA:0000135]) [-3] ! parse: GO:0060035 using "notochord cell development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0009000, OBO_REL:unfolds_in=ZFA:0000135]) [-3] ! parse: GO:0060035 using "notochord cell development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(ZFA:0009000, [OBO_REL:part_of=ZFA:0000135])]) [-3] ! no existing xp def ! def: "The process whose specific outcome is the progression of a notochord cell over time, from its formation to its mature structure. Cell development does not include the steps involved in committing a cell to a specific fate." ! PROPOSED: developmental process that results_in_complete_developmental_of cdef(ZFA:0009000, [OBO_REL:part_of=ZFA:0000135]) [cdef(GO:0032502, [results_in_complete_developmental_of=cdef(ZFA:0009000, [OBO_REL:part_of=ZFA:0000135])])] [Term] id: GO:0060035 ! notochord cell development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of notochord_cell synonym: "cell of notochord development" EXACT [OBOL:automatic] synonym: "cell of the notochord development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0060035: 8.12 ! No parse for: GO:0060036 notochord cell vacuolation ! Already have xp for: GO:0060038 cardiac muscle cell proliferation ! CURRENT : cell proliferation that OBO_REL:increases_population_size_of cardiac muscle cell [cdef(GO:0008283, [OBO_REL:increases_population_size_of=CL:0000746])] ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0060039 using "pericardium development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000099]) [-2] ! parse: GO:0060039 using "pericardium development" => cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000054]) [-2] ! no existing xp def ! def: "The process whose specific outcome is the progression of the pericardium over time, from its formation to the mature structure. The pericardium is a double-walled sac that contains the heart and the roots of the aorta, vena cava and the pulmonary artery." ! PROPOSED: developmental process that results_in_complete_developmental_of pericardial sac [cdef(GO:0032502, [results_in_complete_developmental_of=ZFA:0000054])] [Term] id: GO:0060039 ! pericardium development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of ZFA:0000054 ! pericardial sac synonym: "pericardial sac development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0060039: 5.45 ! Already have xp for: GO:0060040 retinal bipolar neuron differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of retinal bipolar neuron [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000748])] ! No parse for: GO:0060041 retina development in camera-type eye ! No parse for: GO:0060042 retina morphogenesis in camera-type eye ! No relation defined: results_in_contraction_of ! No relation defined: results_in_contraction_of ! parse: GO:0060047 using "heart contraction" => cdef(GO:0008150, [results_in_contraction_of=MA:0000072]) [-2] ! parse: GO:0060047 using "heart contraction" => cdef(GO:0008150, [results_in_contraction_of=ZFA:0000114]) [-2] ! no existing xp def ! def: "The multicellular organismal process by which the heart decreases in volume in a characteristic way to propel blood through the body." ! PROPOSED: biological_process that results_in_contraction_of heart [cdef(GO:0008150, [results_in_contraction_of=ZFA:0000114])] [Term] id: GO:0060047 ! heart contraction intersection_of: GO:0008150 ! biological_process intersection_of: results_in_contraction_of ZFA:0000114 ! heart ! seconds spent parsing GO:0060047: 20.38 ! No relation defined: results_in_contraction_of ! No relation defined: results_in_contraction_of ! No relation defined: results_in_contraction_of ! No relation defined: results_in_contraction_of ! No relation defined: results_in_contraction_of ! No relation defined: results_in_contraction_of ! No relation defined: results_in_contraction_of ! No relation defined: results_in_contraction_of ! No relation defined: results_in_contraction_of ! No relation defined: results_in_contraction_of ! parse: GO:0060048 using "cardiac muscle contraction" => cdef(GO:0008150, [results_in_contraction_of=MA:0000164]) [-2] ! parse: GO:0060048 using "cardiac muscle contraction" => cdef(GO:0008150, [results_in_contraction_of=ZFA:0001319]) [-2] ! parse: GO:0060048 using "heart muscle contraction" => cdef(GO:0008150, [results_in_contraction_of=MA:0000015, OBO_REL:unfolds_in=MA:0000072]) [-3] ! parse: GO:0060048 using "heart muscle contraction" => cdef(GO:0008150, [results_in_contraction_of=MA:0000015, OBO_REL:unfolds_in=ZFA:0000114]) [-3] ! parse: GO:0060048 using "heart muscle contraction" => cdef(GO:0008150, [results_in_contraction_of=ZFA:0000548, OBO_REL:unfolds_in=MA:0000072]) [-3] ! parse: GO:0060048 using "heart muscle contraction" => cdef(GO:0008150, [results_in_contraction_of=ZFA:0000548, OBO_REL:unfolds_in=ZFA:0000114]) [-3] ! parse: GO:0060048 using "heart muscle contraction" => cdef(GO:0008150, [results_in_contraction_of=cdef(MA:0000015, [OBO_REL:part_of=MA:0000072])]) [-3] ! parse: GO:0060048 using "heart muscle contraction" => cdef(GO:0008150, [results_in_contraction_of=cdef(MA:0000015, [OBO_REL:part_of=ZFA:0000114])]) [-3] ! parse: GO:0060048 using "heart muscle contraction" => cdef(GO:0008150, [results_in_contraction_of=cdef(ZFA:0000548, [OBO_REL:part_of=MA:0000072])]) [-3] ! parse: GO:0060048 using "heart muscle contraction" => cdef(GO:0008150, [results_in_contraction_of=cdef(ZFA:0000548, [OBO_REL:part_of=ZFA:0000114])]) [-3] ! no existing xp def ! def: "Muscle contraction of cardiac muscle tissue." ! PROPOSED: biological_process that results_in_contraction_of myocardium [cdef(GO:0008150, [results_in_contraction_of=ZFA:0001319])] [Term] id: GO:0060048 ! cardiac muscle contraction intersection_of: GO:0008150 ! biological_process intersection_of: results_in_contraction_of ZFA:0001319 ! myocardium synonym: "myocardium contraction" EXACT [OBOL:automatic] ! seconds spent parsing GO:0060048: 15.86 ! parse: GO:0060052 using "neurofilament cytoskeleton organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0005856, OBO_REL:unfolds_in=GO:0005883]) [-3] ! parse: GO:0060052 using "neurofilament cytoskeleton organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0060053]) [-2] ! parse: GO:0060052 using "neurofilament cytoskeleton organization and biogenesis" => cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=cdef(GO:0005856, [OBO_REL:part_of=GO:0005883])]) [-3] ! no existing xp def ! def: "A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising neurofilaments and their associated proteins." ! PROPOSED: cellular component organization and biogenesis that OBO_REL:results_in_structural_change_to neurofilament cytoskeleton [cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0060053])] [Term] id: GO:0060052 ! neurofilament cytoskeleton organization and biogenesis intersection_of: GO:0016043 ! cellular component organization and biogenesis intersection_of: OBO_REL:results_in_structural_change_to GO:0060053 ! neurofilament cytoskeleton synonym: "neurofilament cytoskeleton organization" EXACT [OBOL:automatic] ! seconds spent parsing GO:0060052: 9.82 ! No parse for: GO:0060056 mammary gland involution ! parse: GO:0060059 using "embryonic retina morphogenesis in camera-type eye" => cdef(GO:0060042, [OBO_REL:part_of=GO:0009790]) [-2] ! parse: GO:0060059 using "embryonic retina morphogenesis in camera-type eye" => cdef(GO:0060042, [OBO_REL:results_in_developmental_progression_of=anon(embryonic, anatomy)]) [-10] ! no existing xp def ! def: "The process by which the anatomical structure of the retina is generated and organized in a camera-type eye during the embryonic life stage . Morphogenesis pertains to the creation of form." ! PROPOSED: retina morphogenesis in camera-type eye that OBO_REL:part_of embryonic development [cdef(GO:0060042, [OBO_REL:part_of=GO:0009790])] [Term] id: GO:0060059 ! embryonic retina morphogenesis in camera-type eye intersection_of: GO:0060042 ! retina morphogenesis in camera-type eye intersection_of: OBO_REL:part_of GO:0009790 ! embryonic development synonym: "embryogenesis, retina morphogenesis in camera-style eye" EXACT [OBOL:automatic] synonym: "embryogenesis, retina morphogenesis in camera-type eye" EXACT [OBOL:automatic] synonym: "embryogenesis, retinogenesis" EXACT [OBOL:automatic] synonym: "embryonal development, retina morphogenesis in camera-style eye" EXACT [OBOL:automatic] synonym: "embryonal development, retina morphogenesis in camera-type eye" EXACT [OBOL:automatic] synonym: "embryonal development, retinogenesis" EXACT [OBOL:automatic] synonym: "embryonic development, retina morphogenesis in camera-style eye" EXACT [OBOL:automatic] synonym: "embryonic development, retina morphogenesis in camera-type eye" EXACT [OBOL:automatic] synonym: "embryonic development, retinogenesis" EXACT [OBOL:automatic] synonym: "embryonic retina morphogenesis in camera-style eye" EXACT [OBOL:automatic] synonym: "embryonic retinogenesis" EXACT [OBOL:automatic] def: "A retina morphogenesis in camera-style eye that is part of a embryogenesis" [OBOL:automatic] ! seconds spent parsing GO:0060059: 5.51 ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! No relation defined: OBO_REL:results_in_formation_of ! parse: GO:0060061 using "Spemann organizer formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(Spemann organizer, anatomy)]) [-18] ! parse: GO:0060061 using "Spemann's organizer formation" => cdef(GO:0009058, [OBO_REL:results_in_creation_of=ZFA:0000071]) [-2] ! parse: GO:0060061 using "Spemann's organizer formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0000071]) [-2] ! parse: GO:0060061 using "Spemann-Mangold organizer formation" => cdef(GO:0048646, [OBO_REL:results_in_formation_of=anon(Spemann-Mangold organizer, anatomy)]) [-26] ! no existing xp def ! def: "Formation of the specialized region on the dorsalmost side of the embryo that acts as the main signaling center establishing the vertebrate body plan." ! PROPOSED: anatomical structure formation that OBO_REL:results_in_formation_of shield [cdef(GO:0048646, [OBO_REL:results_in_formation_of=ZFA:0000071])] [Term] id: GO:0060061 ! Spemann organizer formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of ZFA:0000071 ! shield synonym: "Spemann ' s organizer formation" EXACT [OBOL:automatic] synonym: "Spemann Mangold organizer anatomical structure formation" EXACT [OBOL:automatic] synonym: "Spemann Mangold organizer formation" EXACT [OBOL:automatic] synonym: "Spemann Mangold organizer formation of an anatomical structure" EXACT [OBOL:automatic] synonym: "organizer anatomical structure formation" EXACT [OBOL:automatic] synonym: "organizer formation" EXACT [OBOL:automatic] synonym: "organizer formation of an anatomical structure" EXACT [OBOL:automatic] synonym: "shield anatomical structure formation" EXACT [OBOL:automatic] synonym: "shield formation" EXACT [OBOL:automatic] synonym: "shield formation of an anatomical structure" EXACT [OBOL:automatic] ! seconds spent parsing GO:0060061: 14.73 ! No parse for: GO:0060062 Spemann organizer formation at the dorsal lip of the blastopore ! No parse for: GO:0060063 Spemann organizer formation at the embryonic shield ! No parse for: GO:0060064 Spemann organizer formation at the anterior end of the primitive streak ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0060065 using "Mullerian tract development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(Mullerian tract, anatomy)]) [-16] ! parse: GO:0060065 using "uterus development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00004924]) [-2] ! parse: GO:0060065 using "uterus development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000389]) [-2] ! no existing xp def ! def: "The reproductive developmental process whose specific outcome is the progression of the uterus over time, from its formation to the mature structure." ! PROPOSED: developmental process that results_in_complete_developmental_of uterus [cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000389])] [Term] id: GO:0060065 ! uterus development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of MA:0000389 ! uterus ! seconds spent parsing GO:0060065: 10.49 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0060066 using "Mullerian tract development" => cdef(GO:0032502, [results_in_complete_developmental_of=anon(Mullerian tract, anatomy)]) [-16] ! parse: GO:0060066 using "fallopian tube development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000385]) [-2] ! no existing xp def ! def: "The reproductive developmental process whose specific outcome is the progression of the fallopian tubes over time, from their formation to the mature structures." ! PROPOSED: developmental process that results_in_complete_developmental_of oviduct [cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000385])] [Term] id: GO:0060066 ! fallopian tube development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of MA:0000385 ! oviduct synonym: "oviduct development" EXACT [OBOL:automatic] synonym: "uterine tube development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0060066: 4.87 ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0060068 using "vagina development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00004925]) [-2] ! parse: GO:0060068 using "vagina development" => cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000394]) [-2] ! no existing xp def ! def: "The reproductive developmental process whose specific outcome is the progression of the vagina over time, from its formation to the mature structure." ! PROPOSED: developmental process that results_in_complete_developmental_of vagina [cdef(GO:0032502, [results_in_complete_developmental_of=MA:0000394])] [Term] id: GO:0060068 ! vagina development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of MA:0000394 ! vagina ! seconds spent parsing GO:0060068: 5.45 ! No parse for: GO:0060073 micturition ! parse: GO:0060074 using "synapse maturation" => cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=FBbt:00005114]) [-2] ! parse: GO:0060074 using "synapse maturation" => cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=GO:0045202]) [-2] ! no existing xp def ! def: "The process that organizes a synapse so that it attains its fully functional state. Synaptic maturation plays a critical role in the establishment of effective synaptic connections in early development." ! PROPOSED: developmental maturation that OBO_REL:results_in_developmental_progression_of synapse [cdef(GO:0021700, [OBO_REL:results_in_developmental_progression_of=GO:0045202])] [Term] id: GO:0060074 ! synapse maturation intersection_of: GO:0021700 ! developmental maturation intersection_of: OBO_REL:results_in_developmental_progression_of GO:0045202 ! synapse synonym: "synapse developmental maturation" EXACT [OBOL:automatic] synonym: "synaptic junction developmental maturation" EXACT [OBOL:automatic] synonym: "synaptic junction maturation" EXACT [OBOL:automatic] ! seconds spent parsing GO:0060074: 10.55 ! No parse for: GO:0060081 membrane hyperpolarization ! No parse for: GO:0060082 eye blink reflex ! Already have xp for: GO:0060083 smooth muscle contraction involved in micturition ! CURRENT : smooth muscle contraction that OBO_REL:part_of micturition [cdef(GO:0006939, [OBO_REL:part_of=GO:0060073])] ! Already have xp for: GO:0060085 smooth muscle relaxation of the bladder outlet ! CURRENT : synaptic transmission that OBO_REL:part_of micturition [cdef(GO:0007268, [OBO_REL:part_of=GO:0060073])] ! Already have xp for: GO:0060088 auditory receptor cell stereocilium organization and biogenesis ! CURRENT : cellular component organization and biogenesis that OBO_REL:results_in_structural_change_to stereocilium and OBO_REL:unfolds_in auditory receptor cell [cdef(GO:0016043, [OBO_REL:results_in_structural_change_to=GO:0032420, OBO_REL:unfolds_in=CL:0000201])] ! No parse for: GO:0060098 membrane reorganization involved in phagocytosis, engulfment ! No parse for: GO:0060113 inner ear receptor cell differenation ! Already have xp for: GO:0060117 auditory receptor cell development ! CURRENT : developmental process that OBO_REL:results_in_developmental_progression_of auditory receptor cell [cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=CL:0000201])] ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! No relation defined: results_in_complete_developmental_of ! parse: GO:0060119 using "inner ear receptor cell development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=CL:0000197, OBO_REL:unfolds_in=MA:0000237]) [-3] ! parse: GO:0060119 using "inner ear receptor cell development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=CL:0000197, OBO_REL:unfolds_in=ZFA:0000217]) [-3] ! parse: GO:0060119 using "inner ear receptor cell development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=FBbt:00004211, OBO_REL:unfolds_in=MA:0000237]) [-3] ! parse: GO:0060119 using "inner ear receptor cell development" => cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=FBbt:00004211, OBO_REL:unfolds_in=ZFA:0000217]) [-3] ! parse: GO:0060119 using "inner ear receptor cell development" => cdef(GO:0032502, [results_in_complete_developmental_of=CL:0000197, OBO_REL:unfolds_in=MA:0000237]) [-3] ! parse: GO:0060119 using "inner ear receptor cell development" => cdef(GO:0032502, [results_in_complete_developmental_of=CL:0000197, OBO_REL:unfolds_in=ZFA:0000217]) [-3] ! parse: GO:0060119 using "inner ear receptor cell development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00004211, OBO_REL:unfolds_in=MA:0000237]) [-3] ! parse: GO:0060119 using "inner ear receptor cell development" => cdef(GO:0032502, [results_in_complete_developmental_of=FBbt:00004211, OBO_REL:unfolds_in=ZFA:0000217]) [-3] ! parse: GO:0060119 using "inner ear receptor cell development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(FBbt:00004211, [OBO_REL:part_of=MA:0000237])]) [-3] ! parse: GO:0060119 using "inner ear receptor cell development" => cdef(GO:0032502, [results_in_complete_developmental_of=cdef(FBbt:00004211, [OBO_REL:part_of=ZFA:0000217])]) [-3] ! no existing xp def ! def: "The process whose specific outcome is the progression of an inner ear receptor cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a specific fate." ! PROPOSED: developmental process that results_in_complete_developmental_of cdef(FBbt:00004211, [OBO_REL:part_of=ZFA:0000217]) [cdef(GO:0032502, [results_in_complete_developmental_of=cdef(FBbt:00004211, [OBO_REL:part_of=ZFA:0000217])])] [Term] id: GO:0060119 ! inner ear receptor cell development intersection_of: GO:0032502 ! developmental process intersection_of: results_in_complete_developmental_of ear_photoreceptor_cell synonym: "otic capsule receptor cell development" EXACT [OBOL:automatic] synonym: "otocyst receptor cell development" EXACT [OBOL:automatic] ! seconds spent parsing GO:0060119: 13.98 ! parse: GO:0060120 using "inner ear receptor cell fate commitment" => cdef(GO:0045165, [OBO_REL:results_in_commitment_to=CL:0000197, OBO_REL:unfolds_in=MA:0000237]) [-3] ! parse: GO:0060120 using "inner ear receptor cell fate commitment" => cdef(GO:0045165, [OBO_REL:results_in_commitment_to=CL:0000197, OBO_REL:unfolds_in=ZFA:0000217]) [-3] ! no existing xp def ! def: "The process by which a cell becomes committed to become an inner ear receptor cell." ! PROPOSED: cell fate commitment that OBO_REL:results_in_commitment_to receptor cell and OBO_REL:unfolds_in inner ear [cdef(GO:0045165, [OBO_REL:results_in_commitment_to=CL:0000197, OBO_REL:unfolds_in=ZFA:0000217])] [Term] id: GO:0060120 ! inner ear receptor cell fate commitment intersection_of: GO:0045165 ! cell fate commitment intersection_of: OBO_REL:results_in_commitment_to CL:0000197 ! receptor cell intersection_of: OBO_REL:unfolds_in ZFA:0000217 ! inner ear synonym: "ear receptor cell cell fate commitment" EXACT [OBOL:automatic] synonym: "ear receptor cell commitment" EXACT [OBOL:automatic] synonym: "ear receptor cell fate commitment" EXACT [OBOL:automatic] synonym: "ear receptor cell lineage commitment" EXACT [OBOL:automatic] synonym: "inner ear receptor cell cell fate commitment" EXACT [OBOL:automatic] synonym: "inner ear receptor cell commitment" EXACT [OBOL:automatic] synonym: "inner ear receptor cell lineage commitment" EXACT [OBOL:automatic] synonym: "otic capsule receptor cell cell fate commitment" EXACT [OBOL:automatic] synonym: "otic capsule receptor cell commitment" EXACT [OBOL:automatic] synonym: "otic capsule receptor cell fate commitment" EXACT [OBOL:automatic] synonym: "otic capsule receptor cell lineage commitment" EXACT [OBOL:automatic] ! seconds spent parsing GO:0060120: 13.59 ! No parse for: GO:0060122 inner ear receptor stereocilium organization and biogenesis ! Already have xp for: GO:0060126 somatotropin secreting cell differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of somatotropin secreting cell [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000295])] ! Already have xp for: GO:0060127 prolactin secreting cell differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of prolactin secreting cell [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000439])] ! Already have xp for: GO:0060128 adrenocorticotropic hormone secreting cell differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of adrenocorticotropic hormone secreting cell [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000467])] ! Already have xp for: GO:0060129 thyroid stimulating hormone secreting cell differentiation ! CURRENT : cell differentiation that OBO_REL:results_in_acquisition_of_features_of thyroid stimulating hormone secreting cell [cdef(GO:0030154, [OBO_REL:results_in_acquisition_of_features_of=CL:0000476])] ! Already have xp for: GO:0060130 thyroid stimulating hormone secreting cell development ! CURRENT : developmental process that OBO_REL:results_in_developmental_progression_of thyroid stimulating hormone secreting cell [cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=CL:0000476])] ! Already have xp for: GO:0060131 adrenocorticotropic hormone secreting cell development ! CURRENT : developmental process that OBO_REL:results_in_developmental_progression_of adrenocorticotropic hormone secreting cell [cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=CL:0000467])] ! Already have xp for: GO:0060132 prolactin secreting cell development ! CURRENT : developmental process that OBO_REL:results_in_developmental_progression_of prolactin secreting cell [cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=CL:0000439])] ! Already have xp for: GO:0060133 somatotropin secreting cell development ! CURRENT : developmental process that OBO_REL:results_in_developmental_progression_of somatotropin secreting cell [cdef(GO:0032502, [OBO_REL:results_in_developmental_progression_of=CL:0000295])] ! No parse for: GO:0060136 embryonic process involved in female pregnancy ! No parse for: GO:0060144 host cellular processes involved in virus induced gene silencing ! No parse for: GO:0060146 host gene silencing in virus induced gene silencing ! parse: GO:0060151 using "peroxisome localization" => cdef(GO:0051179, [OBO_REL:results_in_localization_of=GO:0005777]) [-2] ! no existing xp def ! def: "The processes by which a peroxisome is transported to, and/or maintained in, a specific location. A peroxisome is a small membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules." ! PROPOSED: localization that OBO_REL:results_in_localization_of peroxisome [cdef(GO:0051179, [OBO_REL:results_in_localization_of=GO:0005777])] [Term] id: GO:0060151 ! peroxisome localization intersection_of: GO:0051179 ! localization intersection_of: OBO_REL:results_in_localization_of GO:0005777 ! peroxisome synonym: "peroxisomal fatty acyl transporter establishment and maintenance of localization" EXACT [OBOL:automatic] synonym: "peroxisomal fatty acyl transporter establishment and maintenance of position" EXACT [OBOL:automatic] synonym: "peroxisomal fatty acyl transporter localization" EXACT [OBOL:automatic] synonym: "peroxisomal membrane transporter establishment and maintenance of localization" EXACT [OBOL:automatic] synonym: "peroxisomal membrane transporter establishment and maintenance of position" EXACT [OBOL:automatic] synonym: "peroxisomal membrane transporter localization" EXACT [OBOL:automatic] ! seconds spent parsing GO:0060151: 6.21 ! parse: GO:0060152 using "microtubule-based peroxisome localization" => cdef(GO:0060151, [OBO_REL:has_participant=GO:0005874]) [-2] ! parse: GO:0060152 using "microtubule-based peroxisome localization" => cdef(cdef(GO:0051179, [OBO_REL:results_in_localization_of=GO:0005777]), [OBO_REL:has_participant=GO:0005874]) [-3] ! no existing xp def ! def: "The microtubule-based process by which a peroxisome is transported to, and/or maintained in, a specific location. A peroxisome is a small membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules." ! PROPOSED: peroxisome localization that OBO_REL:has_participant microtubule [cdef(GO:0060151, [OBO_REL:has_participant=GO:0005874])] [Term] id: GO:0060152 ! microtubule-based peroxisome localization intersection_of: GO:0060151 ! peroxisome localization intersection_of: OBO_REL:has_participant GO:0005874 ! microtubule ! seconds spent parsing GO:0060152: 10.43 ! No parse for: GO:0060154 cellular process regulating host cell cycle in response to virus ! No parse for: GO:0065002 intracellular protein transport across a membrane ! parse: GO:0065003 using "macromolecular complex assembly" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0032991]) [-2] ! parse: GO:0065003 using "macromolecule complex assembly" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0032991]) [-2] ! no existing xp def ! def: "The aggregation and bonding together of a set of macromolecules to form a complex." ! PROPOSED: cellular component assembly that OBO_REL:results_in_creation_of macromolecular complex [cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0032991])] [Term] id: GO:0065003 ! macromolecular complex assembly intersection_of: GO:0022607 ! cellular component assembly intersection_of: OBO_REL:results_in_creation_of GO:0032991 ! macromolecular complex synonym: "assembly and maintenance of macromolecular complex" EXACT [OBOL:automatic] synonym: "assembly and maintenance of macromolecule complex" EXACT [OBOL:automatic] synonym: "assembly of macromolecular complex" EXACT [OBOL:automatic] synonym: "assembly of macromolecule complex" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of macromolecular complex" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of macromolecule complex" EXACT [OBOL:automatic] synonym: "biogenesis of macromolecular complex" EXACT [OBOL:automatic] synonym: "biogenesis of macromolecule complex" EXACT [OBOL:automatic] synonym: "cell structure assembly of macromolecular complex" EXACT [OBOL:automatic] synonym: "cell structure assembly of macromolecule complex" EXACT [OBOL:automatic] synonym: "cellular component assembly of macromolecular complex" EXACT [OBOL:automatic] synonym: "cellular component assembly of macromolecule complex" EXACT [OBOL:automatic] synonym: "complex assembly of macromolecular complex" EXACT [OBOL:automatic] synonym: "complex assembly of macromolecule complex" EXACT [OBOL:automatic] synonym: "formation of macromolecular complex" EXACT [OBOL:automatic] synonym: "formation of macromolecule complex" EXACT [OBOL:automatic] synonym: "macromolecular complex assembly and maintenance" EXACT [OBOL:automatic] synonym: "macromolecular complex biogenesis" EXACT [OBOL:automatic] synonym: "macromolecular complex biogenesis and assembly" EXACT [OBOL:automatic] synonym: "macromolecular complex cell structure assembly" EXACT [OBOL:automatic] synonym: "macromolecular complex cellular component assembly" EXACT [OBOL:automatic] synonym: "macromolecular complex complex assembly" EXACT [OBOL:automatic] synonym: "macromolecular complex formation" EXACT [OBOL:automatic] synonym: "macromolecule complex assembly and maintenance" EXACT [OBOL:automatic] synonym: "macromolecule complex biogenesis" EXACT [OBOL:automatic] synonym: "macromolecule complex biogenesis and assembly" EXACT [OBOL:automatic] synonym: "macromolecule complex cell structure assembly" EXACT [OBOL:automatic] synonym: "macromolecule complex cellular component assembly" EXACT [OBOL:automatic] synonym: "macromolecule complex complex assembly" EXACT [OBOL:automatic] synonym: "macromolecule complex formation" EXACT [OBOL:automatic] def: "The aggregation and bonding together of a set of macromolecules to form a macromolecular complex" [OBOL:automatic] ! seconds spent parsing GO:0065003: 11.44 ! parse: GO:0065004 using "protein-DNA complex assembly" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0032993]) [-2] ! no existing xp def ! def: "The aggregation and bonding together of proteins and DNA molecules to form a protein-DNA complex." ! PROPOSED: cellular component assembly that OBO_REL:results_in_creation_of protein-DNA complex [cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0032993])] [Term] id: GO:0065004 ! protein-DNA complex assembly intersection_of: GO:0022607 ! cellular component assembly intersection_of: OBO_REL:results_in_creation_of GO:0032993 ! protein-DNA complex synonym: "assembly and maintenance of protein-DNA complex" EXACT [OBOL:automatic] synonym: "assembly of protein-DNA complex" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of protein-DNA complex" EXACT [OBOL:automatic] synonym: "biogenesis of protein-DNA complex" EXACT [OBOL:automatic] synonym: "cell structure assembly of protein-DNA complex" EXACT [OBOL:automatic] synonym: "cellular component assembly of protein-DNA complex" EXACT [OBOL:automatic] synonym: "complex assembly of protein-DNA complex" EXACT [OBOL:automatic] synonym: "formation of protein-DNA complex" EXACT [OBOL:automatic] synonym: "protein-DNA complex assembly and maintenance" EXACT [OBOL:automatic] synonym: "protein-DNA complex biogenesis" EXACT [OBOL:automatic] synonym: "protein-DNA complex biogenesis and assembly" EXACT [OBOL:automatic] synonym: "protein-DNA complex cell structure assembly" EXACT [OBOL:automatic] synonym: "protein-DNA complex cellular component assembly" EXACT [OBOL:automatic] synonym: "protein-DNA complex complex assembly" EXACT [OBOL:automatic] synonym: "protein-DNA complex formation" EXACT [OBOL:automatic] def: "The aggregation and bonding together of a set of macromolecules to form a protein-DNA complex" [OBOL:automatic] ! seconds spent parsing GO:0065004: 5.75 ! parse: GO:0065005 using "protein-lipid complex assembly" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0032994]) [-2] ! no existing xp def ! def: "The aggregation and bonding together of proteins and lipids to form a protein-DNA complex." ! PROPOSED: cellular component assembly that OBO_REL:results_in_creation_of protein-lipid complex [cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0032994])] [Term] id: GO:0065005 ! protein-lipid complex assembly intersection_of: GO:0022607 ! cellular component assembly intersection_of: OBO_REL:results_in_creation_of GO:0032994 ! protein-lipid complex synonym: "assembly and maintenance of protein-lipid complex" EXACT [OBOL:automatic] synonym: "assembly of protein-lipid complex" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of protein-lipid complex" EXACT [OBOL:automatic] synonym: "biogenesis of protein-lipid complex" EXACT [OBOL:automatic] synonym: "cell structure assembly of protein-lipid complex" EXACT [OBOL:automatic] synonym: "cellular component assembly of protein-lipid complex" EXACT [OBOL:automatic] synonym: "complex assembly of protein-lipid complex" EXACT [OBOL:automatic] synonym: "formation of protein-lipid complex" EXACT [OBOL:automatic] synonym: "protein-lipid complex assembly and maintenance" EXACT [OBOL:automatic] synonym: "protein-lipid complex biogenesis" EXACT [OBOL:automatic] synonym: "protein-lipid complex biogenesis and assembly" EXACT [OBOL:automatic] synonym: "protein-lipid complex cell structure assembly" EXACT [OBOL:automatic] synonym: "protein-lipid complex cellular component assembly" EXACT [OBOL:automatic] synonym: "protein-lipid complex complex assembly" EXACT [OBOL:automatic] synonym: "protein-lipid complex formation" EXACT [OBOL:automatic] def: "The aggregation and bonding together of a set of macromolecules to form a protein-lipid complex" [OBOL:automatic] ! seconds spent parsing GO:0065005: 5.76 ! parse: GO:0065006 using "protein-carbohydrate complex assembly" => cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0032992]) [-2] ! no existing xp def ! def: "The aggregation and bonding together of proteins and carbohydrates to form a protein-carbohydrate complex." ! PROPOSED: cellular component assembly that OBO_REL:results_in_creation_of protein-carbohydrate complex [cdef(GO:0022607, [OBO_REL:results_in_creation_of=GO:0032992])] [Term] id: GO:0065006 ! protein-carbohydrate complex assembly intersection_of: GO:0022607 ! cellular component assembly intersection_of: OBO_REL:results_in_creation_of GO:0032992 ! protein-carbohydrate complex synonym: "assembly and maintenance of protein-carbohydrate complex" EXACT [OBOL:automatic] synonym: "assembly of protein-carbohydrate complex" EXACT [OBOL:automatic] synonym: "biogenesis and assembly of protein-carbohydrate complex" EXACT [OBOL:automatic] synonym: "biogenesis of protein-carbohydrate complex" EXACT [OBOL:automatic] synonym: "cell structure assembly of protein-carbohydrate complex" EXACT [OBOL:automatic] synonym: "cellular component assembly of protein-carbohydrate complex" EXACT [OBOL:automatic] synonym: "complex assembly of protein-carbohydrate complex" EXACT [OBOL:automatic] synonym: "formation of protein-carbohydrate complex" EXACT [OBOL:automatic] synonym: "protein-carbohydrate complex assembly and maintenance" EXACT [OBOL:automatic] synonym: "protein-carbohydrate complex biogenesis" EXACT [OBOL:automatic] synonym: "protein-carbohydrate complex biogenesis and assembly" EXACT [OBOL:automatic] synonym: "protein-carbohydrate complex cell structure assembly" EXACT [OBOL:automatic] synonym: "protein-carbohydrate complex cellular component assembly" EXACT [OBOL:automatic] synonym: "protein-carbohydrate complex complex assembly" EXACT [OBOL:automatic] synonym: "protein-carbohydrate complex formation" EXACT [OBOL:automatic] def: "The aggregation and bonding together of a set of macromolecules to form a protein-carbohydrate complex" [OBOL:automatic] ! seconds spent parsing GO:0065006: 5.76 ! anonymous primitive or inner classes created as by-products: [Term] id: anatomy:-_containing is_anonymous: true name: - containing namespace: anatomy [Term] id: anatomy:-_containing_eggshell is_anonymous: true name: - containing eggshell namespace: anatomy [Term] id: anatomy:-_derived is_anonymous: true name: - derived namespace: anatomy [Term] id: anatomy:-_endoderm_interaction_involved_in is_anonymous: true name: - endoderm interaction involved in namespace: anatomy [Term] id: anatomy:-_midbrain_boundary is_anonymous: true name: - midbrain boundary namespace: anatomy [Term] id: anatomy:-_spinal_cord_boundary is_anonymous: true name: - spinal cord boundary namespace: anatomy [Term] id: anatomy:BMP_signaling_pathway_in is_anonymous: true name: BMP signaling pathway in namespace: anatomy [Term] id: anatomy:GABAergic_interneuron is_anonymous: true name: GABAergic interneuron namespace: anatomy [Term] id: cell:GABAergic_interneuron is_anonymous: true name: GABAergic interneuron namespace: cell [Term] id: anatomy:XI is_anonymous: true name: XI namespace: anatomy [Term] id: anatomy:XII is_anonymous: true name: XII namespace: anatomy [Term] id: anatomy:accumulation_during is_anonymous: true name: accumulation during namespace: anatomy [Term] id: anatomy:acid is_anonymous: true name: acid namespace: anatomy [Term] id: anatomy:adventitious is_anonymous: true name: adventitious namespace: anatomy [Term] id: anatomy:ammon_gyrus is_anonymous: true name: ammon gyrus namespace: anatomy [Term] id: anatomy:and_cuticulin_-_based is_anonymous: true name: and cuticulin-based namespace: anatomy [Term] id: anatomy:and_notum_subfield is_anonymous: true name: and notum subfield namespace: anatomy [Term] id: anatomy:anterioposterior is_anonymous: true name: anterioposterior namespace: anatomy [Term] id: anatomy:anterior_-_posterior is_anonymous: true name: anterior-posterior namespace: anatomy [Term] id: anatomy:anterior_/_posterior is_anonymous: true name: anterior/posterior namespace: anatomy [Term] id: anatomy:antrum_/_follicular_fluid is_anonymous: true name: antrum/follicular fluid namespace: anatomy [Term] id: anatomy:association is_anonymous: true name: association namespace: anatomy [Term] id: anatomy:atrial_heart is_anonymous: true name: atrial heart namespace: anatomy [Term] id: anatomy:birth_or_egg is_anonymous: true name: birth or egg namespace: anatomy [Term] id: anatomy:boundary is_anonymous: true name: boundary namespace: anatomy [Term] id: anatomy:branched_chain_family_amino_acid is_anonymous: true name: branched chain family amino acid namespace: anatomy [Term] id: anatomy:bundle is_anonymous: true name: bundle namespace: anatomy [Term] id: anatomy:camera_-_type is_anonymous: true name: camera-type namespace: anatomy [Term] id: anatomy:cellulose is_anonymous: true name: cellulose namespace: anatomy [Term] id: anatomy:central is_anonymous: true name: central namespace: anatomy [Term] id: anatomy:chitin_-_based is_anonymous: true name: chitin-based namespace: anatomy [Term] id: anatomy:chitin_-_based_larval is_anonymous: true name: chitin-based larval namespace: anatomy [Term] id: anatomy:chitin_-_containing is_anonymous: true name: chitin-containing namespace: anatomy [Term] id: anatomy:chordate is_anonymous: true name: chordate namespace: anatomy [Term] id: anatomy:cochlear_nucleus is_anonymous: true name: cochlear nucleus namespace: anatomy [Term] id: anatomy:commissural is_anonymous: true name: commissural namespace: anatomy [Term] id: anatomy:cyst is_anonymous: true name: cyst namespace: anatomy [Term] id: anatomy:digit is_anonymous: true name: digit namespace: anatomy [Term] id: anatomy:dorsal_-_ventral is_anonymous: true name: dorsal-ventral namespace: anatomy [Term] id: anatomy:dorsal_/_ventral is_anonymous: true name: dorsal/ventral namespace: anatomy [Term] id: anatomy:ectodermal is_anonymous: true name: ectodermal namespace: anatomy [Term] id: anatomy:embryonic is_anonymous: true name: embryonic namespace: anatomy [Term] id: anatomy:enzyme_active_site is_anonymous: true name: enzyme active site namespace: anatomy [Term] id: anatomy:epithelial_mucilage is_anonymous: true name: epithelial mucilage namespace: anatomy [Term] id: anatomy:epithelial_tube is_anonymous: true name: epithelial tube namespace: anatomy [Term] id: cell:fate is_anonymous: true name: fate namespace: cell [Term] id: anatomy:fibre is_anonymous: true name: fibre namespace: anatomy [Term] id: anatomy:fruiting_body is_anonymous: true name: fruiting body namespace: anatomy [Term] id: anatomy:germinal_center is_anonymous: true name: germinal center namespace: anatomy [Term] id: anatomy:gland is_anonymous: true name: gland namespace: anatomy [Term] id: anatomy:glutaredoxin is_anonymous: true name: glutaredoxin namespace: anatomy [Term] id: anatomy:gonadal is_anonymous: true name: gonadal namespace: anatomy [Term] id: anatomy:gonadotrophin_-_releasing_hormone is_anonymous: true name: gonadotrophin-releasing hormone namespace: anatomy [Term] id: anatomy:gonadotrophin_-_releasing_hormone_neuron is_anonymous: true name: gonadotrophin-releasing hormone neuron namespace: anatomy [Term] id: cell:hemocyte is_anonymous: true name: hemocyte namespace: cell [Term] id: anatomy:hydrocarbon is_anonymous: true name: hydrocarbon namespace: anatomy [Term] id: anatomy:in_utero is_anonymous: true name: in utero namespace: anatomy [Term] id: anatomy:instar is_anonymous: true name: instar namespace: anatomy [Term] id: anatomy:instar_larval_or_pupal is_anonymous: true name: instar larval or pupal namespace: anatomy [Term] id: anatomy:interferon_-_gamma is_anonymous: true name: interferon-gamma namespace: anatomy [Term] id: anatomy:interleukin_-_1 is_anonymous: true name: interleukin-1 namespace: anatomy [Term] id: anatomy:interleukin_-_1_0 is_anonymous: true name: interleukin-1 0 namespace: anatomy [Term] id: anatomy:interleukin_-_1_1 is_anonymous: true name: interleukin-1 1 namespace: anatomy [Term] id: anatomy:interleukin_-_1_2 is_anonymous: true name: interleukin-1 2 namespace: anatomy [Term] id: anatomy:interleukin_-_1_3 is_anonymous: true name: interleukin-1 3 namespace: anatomy [Term] id: anatomy:interleukin_-_1_4 is_anonymous: true name: interleukin-1 4 namespace: anatomy [Term] id: anatomy:interleukin_-_1_5 is_anonymous: true name: interleukin-1 5 namespace: anatomy [Term] id: anatomy:interleukin_-_1_6 is_anonymous: true name: interleukin-1 6 namespace: anatomy [Term] id: anatomy:interleukin_-_1_7 is_anonymous: true name: interleukin-1 7 namespace: anatomy [Term] id: anatomy:interleukin_-_1_8 is_anonymous: true name: interleukin-1 8 namespace: anatomy [Term] id: anatomy:interleukin_-_1_9 is_anonymous: true name: interleukin-1 9 namespace: anatomy [Term] id: anatomy:interleukin_-_2 is_anonymous: true name: interleukin-2 namespace: anatomy [Term] id: anatomy:interleukin_-_2_0 is_anonymous: true name: interleukin-2 0 namespace: anatomy [Term] id: anatomy:interleukin_-_2_1 is_anonymous: true name: interleukin-2 1 namespace: anatomy [Term] id: anatomy:interleukin_-_2_2 is_anonymous: true name: interleukin-2 2 namespace: anatomy [Term] id: anatomy:interleukin_-_2_3 is_anonymous: true name: interleukin-2 3 namespace: anatomy [Term] id: anatomy:interleukin_-_2_4 is_anonymous: true name: interleukin-2 4 namespace: anatomy [Term] id: anatomy:interleukin_-_2_5 is_anonymous: true name: interleukin-2 5 namespace: anatomy [Term] id: anatomy:interleukin_-_2_6 is_anonymous: true name: interleukin-2 6 namespace: anatomy [Term] id: anatomy:interleukin_-_2_7 is_anonymous: true name: interleukin-2 7 namespace: anatomy [Term] id: anatomy:interleukin_-_3 is_anonymous: true name: interleukin-3 namespace: anatomy [Term] id: anatomy:interleukin_-_4 is_anonymous: true name: interleukin-4 namespace: anatomy [Term] id: anatomy:interleukin_-_5 is_anonymous: true name: interleukin-5 namespace: anatomy [Term] id: anatomy:interleukin_-_6 is_anonymous: true name: interleukin-6 namespace: anatomy [Term] id: anatomy:interleukin_-_7 is_anonymous: true name: interleukin-7 namespace: anatomy [Term] id: anatomy:interleukin_-_8 is_anonymous: true name: interleukin-8 namespace: anatomy [Term] id: anatomy:interleukin_-_9 is_anonymous: true name: interleukin-9 namespace: anatomy [Term] id: anatomy:larval is_anonymous: true name: larval namespace: anatomy [Term] id: anatomy:larval_or is_anonymous: true name: larval or namespace: anatomy [Term] id: anatomy:layer is_anonymous: true name: layer namespace: anatomy [Term] id: anatomy:limbic is_anonymous: true name: limbic namespace: anatomy [Term] id: anatomy:low_-_density_lipoprotein_receptor is_anonymous: true name: low-density lipoprotein receptor namespace: anatomy [Term] id: anatomy:lymphotoxin_A is_anonymous: true name: lymphotoxin A namespace: anatomy [Term] id: anatomy:mating_plug is_anonymous: true name: mating plug namespace: anatomy [Term] id: anatomy:mediolateral is_anonymous: true name: mediolateral namespace: anatomy [Term] id: anatomy:microtubular_system is_anonymous: true name: microtubular system namespace: anatomy [Term] id: cell:morphogenesis_during is_anonymous: true name: morphogenesis during namespace: cell [Term] id: anatomy:mucosal_-_associated_lymphoid is_anonymous: true name: mucosal-associated lymphoid namespace: anatomy [Term] id: anatomy:multicellular_organismal is_anonymous: true name: multicellular organismal namespace: anatomy [Term] id: anatomy:network is_anonymous: true name: network namespace: anatomy [Term] id: anatomy:non_- is_anonymous: true name: non- namespace: anatomy [Term] id: cell:nuclear is_anonymous: true name: nuclear namespace: cell [Term] id: anatomy:nuclear_fragmentation_during is_anonymous: true name: nuclear fragmentation during namespace: anatomy [Term] id: anatomy:of_Burdach is_anonymous: true name: of Burdach namespace: anatomy [Term] id: anatomy:open_tracheal is_anonymous: true name: open tracheal namespace: anatomy [Term] id: anatomy:orbitofrontal_cortex is_anonymous: true name: orbitofrontal cortex namespace: anatomy [Term] id: anatomy:organic_acid is_anonymous: true name: organic acid namespace: anatomy [Term] id: anatomy:organismal is_anonymous: true name: organismal namespace: anatomy [Term] id: anatomy:organomercury is_anonymous: true name: organomercury namespace: anatomy [Term] id: anatomy:ovarian_ring_canal is_anonymous: true name: ovarian ring canal namespace: anatomy [Term] id: anatomy:paraxial is_anonymous: true name: paraxial namespace: anatomy [Term] id: anatomy:penicillin is_anonymous: true name: penicillin namespace: anatomy [Term] id: anatomy:peptidoglycan is_anonymous: true name: peptidoglycan namespace: anatomy [Term] id: anatomy:primary_meristem is_anonymous: true name: primary meristem namespace: anatomy [Term] id: anatomy:protein is_anonymous: true name: protein namespace: anatomy [Term] id: anatomy:protein_-_based is_anonymous: true name: protein-based namespace: anatomy [Term] id: anatomy:pupal is_anonymous: true name: pupal namespace: anatomy [Term] id: anatomy:reticulospinal_tract is_anonymous: true name: reticulospinal tract namespace: anatomy [Term] id: anatomy:salivary_nucleus is_anonymous: true name: salivary nucleus namespace: anatomy [Term] id: anatomy:secondary is_anonymous: true name: secondary namespace: anatomy [Term] id: anatomy:selection_of_site_for_barrier_septum is_anonymous: true name: selection of site for barrier septum namespace: anatomy [Term] id: anatomy:sexually_dimorphic is_anonymous: true name: sexually dimorphic namespace: anatomy [Term] id: anatomy:somatic is_anonymous: true name: somatic namespace: anatomy [Term] id: anatomy:somatic_motor is_anonymous: true name: somatic motor namespace: anatomy [Term] id: anatomy:sorocarp is_anonymous: true name: sorocarp namespace: anatomy [Term] id: anatomy:structure is_anonymous: true name: structure namespace: anatomy [Term] id: anatomy:t_-_loop is_anonymous: true name: t-loop namespace: anatomy [Term] id: anatomy:tRNA_aminoacylation_for_nonribosomal_peptide is_anonymous: true name: tRNA aminoacylation for nonribosomal peptide namespace: anatomy [Term] id: anatomy:telomeric_3_'_overhang is_anonymous: true name: telomeric 3 ' overhang namespace: anatomy [Term] id: anatomy:terminalis is_anonymous: true name: terminalis namespace: anatomy [Term] id: anatomy:testicular_ring_canal is_anonymous: true name: testicular ring canal namespace: anatomy [Term] id: anatomy:thioredoxin is_anonymous: true name: thioredoxin namespace: anatomy [Term] id: anatomy:tracheal is_anonymous: true name: tracheal namespace: anatomy [Term] id: anatomy:tumor_necrosis_factor is_anonymous: true name: tumor necrosis factor namespace: anatomy [Term] id: anatomy:ureteric_bud is_anonymous: true name: ureteric bud namespace: anatomy [Term] id: anatomy:ventral is_anonymous: true name: ventral namespace: anatomy [Term] id: anatomy:ventral_cord is_anonymous: true name: ventral cord namespace: anatomy [Term] id: cell:ventral_spinal_cord_interneuron is_anonymous: true name: ventral spinal cord interneuron namespace: cell [Term] id: anatomy:ventricular is_anonymous: true name: ventricular namespace: anatomy [Term] id: anatomy:ventricular_cardiomyocyte is_anonymous: true name: ventricular cardiomyocyte namespace: anatomy [Term] id: anatomy:ventricular_heart_myofibril is_anonymous: true name: ventricular heart myofibril namespace: anatomy [Term] id: interneuron_precursor intersection_of: CL:0000000 ! cell intersection_of: OBO_REL:develops_into CL:0000099 ! interneuron synonym: "interneuron precursor" EXACT [OBOL:automatic] synonym: "interneuron precursor cell" EXACT [OBOL:automatic] synonym: "interneuron precursors" EXACT [OBOL:automatic] [Term] id: imaginal_disc_-_derived_genitalia intersection_of: FBbt:00001761 ! imaginal disc intersection_of: OBO_REL:derives_from FBbt:00004826 ! genitalia synonym: "imaginal disc-derived genitalia" EXACT [OBOL:automatic] synonym: "imaginal disk-derived genitalia" EXACT [OBOL:automatic] [Term] id: imaginal_disc_-_derived_extremity intersection_of: FBbt:00001761 ! imaginal disc intersection_of: OBO_REL:derives_from MA:0000007 ! limb synonym: "imaginal disc-derived extremity" EXACT [OBOL:automatic] synonym: "imaginal disk-derived extremity" EXACT [OBOL:automatic] [Term] id: imaginal_disc_-_derived_leg intersection_of: FBbt:00001761 ! imaginal disc intersection_of: OBO_REL:derives_from MA:0000047 ! leg synonym: "imaginal disc-derived leg" EXACT [OBOL:automatic] synonym: "imaginal disk-derived leg" EXACT [OBOL:automatic] [Term] id: imaginal_disc_-_derived_leg_joint intersection_of: FBbt:00001761 ! imaginal disc intersection_of: OBO_REL:derives_from leg_joint synonym: "imaginal disc-derived joint of leg" EXACT [OBOL:automatic] synonym: "imaginal disc-derived joint of the leg" EXACT [OBOL:automatic] synonym: "imaginal disc-derived leg joint" EXACT [OBOL:automatic] synonym: "imaginal disk-derived joint of leg" EXACT [OBOL:automatic] synonym: "imaginal disk-derived joint of the leg" EXACT [OBOL:automatic] synonym: "imaginal disk-derived leg joint" EXACT [OBOL:automatic] [Term] id: ear_photoreceptor_cell intersection_of: FBbt:00004211 ! photoreceptor cell intersection_of: OBO_REL:part_of ZFA:0000217 ! inner ear synonym: "ear photoreceptor cell" EXACT [OBOL:automatic] synonym: "ear receptor cell" EXACT [OBOL:automatic] synonym: "ear retinula cell" EXACT [OBOL:automatic] synonym: "inner ear photoreceptor cell" EXACT [OBOL:automatic] synonym: "inner ear receptor cell" EXACT [OBOL:automatic] synonym: "inner ear retinula cell" EXACT [OBOL:automatic] synonym: "otic capsule photoreceptor cell" EXACT [OBOL:automatic] synonym: "otic capsule receptor cell" EXACT [OBOL:automatic] synonym: "otic capsule retinula cell" EXACT [OBOL:automatic] synonym: "otocyst photoreceptor cell" EXACT [OBOL:automatic] synonym: "otocyst receptor cell" EXACT [OBOL:automatic] synonym: "otocyst retinula cell" EXACT [OBOL:automatic] synonym: "photoreceptor cell of ear" EXACT [OBOL:automatic] synonym: "photoreceptor cell of inner ear" EXACT [OBOL:automatic] synonym: "photoreceptor cell of otic capsule" EXACT [OBOL:automatic] synonym: "photoreceptor cell of the ear" EXACT [OBOL:automatic] synonym: "photoreceptor cell of the inner ear" EXACT [OBOL:automatic] synonym: "photoreceptor cell of the otic capsule" EXACT [OBOL:automatic] synonym: "receptor cell of ear" EXACT [OBOL:automatic] synonym: "receptor cell of inner ear" EXACT [OBOL:automatic] synonym: "receptor cell of otic capsule" EXACT [OBOL:automatic] synonym: "receptor cell of the ear" EXACT [OBOL:automatic] synonym: "receptor cell of the inner ear" EXACT [OBOL:automatic] synonym: "receptor cell of the otic capsule" EXACT [OBOL:automatic] synonym: "retinula cell of ear" EXACT [OBOL:automatic] synonym: "retinula cell of inner ear" EXACT [OBOL:automatic] synonym: "retinula cell of otic capsule" EXACT [OBOL:automatic] synonym: "retinula cell of the ear" EXACT [OBOL:automatic] synonym: "retinula cell of the inner ear" EXACT [OBOL:automatic] synonym: "retinula cell of the otic capsule" EXACT [OBOL:automatic] def: "A photoreceptor cell that is part of a ear" [OBOL:automatic] [Term] id: heart_muscle_fiber intersection_of: FBbt:00005075 ! muscle fiber intersection_of: OBO_REL:part_of ZFA:0000114 ! heart synonym: "heart muscle fiber" EXACT [OBOL:automatic] def: "A muscle fiber that is part of a heart" [OBOL:automatic] [Term] id: gracilis_tract intersection_of: FBbt:00005100 ! tract intersection_of: OBO_REL:part_of MA:0002311 ! gracilis synonym: "gracilis tract" EXACT [OBOL:automatic] synonym: "tract of gracilis" EXACT [OBOL:automatic] synonym: "tract of the gracilis" EXACT [OBOL:automatic] def: "A tract that is part of a gracilis" [OBOL:automatic] [Term] id: compound_eye_photoreceptor intersection_of: FBbt:00005162 ! photoreceptor intersection_of: OBO_REL:part_of FBbt:00004508 ! eye synonym: "compound eye photoreceptor" EXACT [OBOL:automatic] synonym: "eye photoreceptor" EXACT [OBOL:automatic] synonym: "photoreceptor of compound eye" EXACT [OBOL:automatic] synonym: "photoreceptor of eye" EXACT [OBOL:automatic] synonym: "photoreceptor of the compound eye" EXACT [OBOL:automatic] synonym: "photoreceptor of the eye" EXACT [OBOL:automatic] def: "A photoreceptor that is part of a compound eye" [OBOL:automatic] [Term] id: CN_-_II_P intersection_of: FBbt:00005495 ! primordium intersection_of: OBO_REL:part_of ZFA:0000435 ! cranial nerve II synonym: "CN-II P" EXACT [OBOL:automatic] synonym: "CN-II placode" EXACT [OBOL:automatic] synonym: "CN-II primordium" EXACT [OBOL:automatic] synonym: "P of CN-II" EXACT [OBOL:automatic] synonym: "P of cranial nerve II" EXACT [OBOL:automatic] synonym: "P of optic" EXACT [OBOL:automatic] synonym: "P of optic nerve" EXACT [OBOL:automatic] synonym: "P of the CN-II" EXACT [OBOL:automatic] synonym: "P of the cranial nerve II" EXACT [OBOL:automatic] synonym: "P of the optic" EXACT [OBOL:automatic] synonym: "P of the optic nerve" EXACT [OBOL:automatic] synonym: "cranial nerve II P" EXACT [OBOL:automatic] synonym: "cranial nerve II placode" EXACT [OBOL:automatic] synonym: "cranial nerve II primordium" EXACT [OBOL:automatic] synonym: "optic P" EXACT [OBOL:automatic] synonym: "optic nerve P" EXACT [OBOL:automatic] synonym: "optic nerve placode" EXACT [OBOL:automatic] synonym: "optic nerve primordium" EXACT [OBOL:automatic] synonym: "optic placode" EXACT [OBOL:automatic] synonym: "optic primordium" EXACT [OBOL:automatic] synonym: "placode of CN-II" EXACT [OBOL:automatic] synonym: "placode of cranial nerve II" EXACT [OBOL:automatic] synonym: "placode of optic" EXACT [OBOL:automatic] synonym: "placode of optic nerve" EXACT [OBOL:automatic] synonym: "placode of the CN-II" EXACT [OBOL:automatic] synonym: "placode of the cranial nerve II" EXACT [OBOL:automatic] synonym: "placode of the optic" EXACT [OBOL:automatic] synonym: "placode of the optic nerve" EXACT [OBOL:automatic] synonym: "primordium of CN-II" EXACT [OBOL:automatic] synonym: "primordium of cranial nerve II" EXACT [OBOL:automatic] synonym: "primordium of optic" EXACT [OBOL:automatic] synonym: "primordium of optic nerve" EXACT [OBOL:automatic] synonym: "primordium of the CN-II" EXACT [OBOL:automatic] synonym: "primordium of the cranial nerve II" EXACT [OBOL:automatic] synonym: "primordium of the optic" EXACT [OBOL:automatic] synonym: "primordium of the optic nerve" EXACT [OBOL:automatic] def: "A P that is part of a CN-II" [OBOL:automatic] [Term] id: spinal_cord_larval_ventral_anastomosis intersection_of: FBbt:00005594 ! larval ventral anastomosis intersection_of: OBO_REL:part_of ZFA:0000075 ! spinal cord synonym: "larval ventral anastomosis of spinal cord" EXACT [OBOL:automatic] synonym: "larval ventral anastomosis of the spinal cord" EXACT [OBOL:automatic] synonym: "spinal cord larval ventral anastomosis" EXACT [OBOL:automatic] synonym: "spinal cord ventral commissure" EXACT [OBOL:automatic] synonym: "ventral commissure of spinal cord" EXACT [OBOL:automatic] synonym: "ventral commissure of the spinal cord" EXACT [OBOL:automatic] def: "A larval ventral anastomosis that is part of a spinal cord" [OBOL:automatic] [Term] id: flagellum_axonemal_motor_activity intersection_of: GO:0005930 ! axoneme intersection_of: OBO_REL:part_of GO:0019861 ! flagellum synonym: "flagellum axonemal motor activity" EXACT [OBOL:automatic] synonym: "flagellum axoneme" EXACT [OBOL:automatic] def: "A axonemal motor activity that is part of a flagellum" [OBOL:automatic] ! Could not write anon class: cdef(GO:0006810, [OBO_REL:results_in_transport_of=GO:0019015]) [Term] id: viral_capsid_(_sensu_Retroviridae_)_hydrolase_activity_,_acting_on_acid_anhydrides_,_acting_on_GTP_,_involved_in_cellular_and_subcellular_movement intersection_of: GO:0006810 ! transport intersection_of: OBO_REL:results_in_transport_of GO:0019028 ! viral capsid synonym: "viral capsid (sensu Retroviridae) hydrolase activity, acting on acid anhydrides, acting on GTP, involved in cellular and subcellular movement" EXACT [OBOL:automatic] synonym: "viral capsid (sensu Retroviridae) transport" EXACT [OBOL:automatic] synonym: "viral capsid transport" EXACT [OBOL:automatic] ! Could not write anon class: cdef(GO:0007165, [OBO_REL:has_agent=GO:0031012, OBO_REL:has_agent=ZFA:0009070]) [Term] id: neurocranium_morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0000377 ! neurocranium synonym: "neurocranium morphogenesis" EXACT [OBOL:automatic] [Term] id: cranial_skeleton_morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0000737 ! cranial skeleton synonym: "cranial skeleton morphogenesis" EXACT [OBOL:automatic] [Term] id: eye_cup_anatomical_structure_morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0001202 ! optic cup synonym: "eye cup anatomical structure morphogenesis" EXACT [OBOL:automatic] synonym: "eye cup morphogenesis" EXACT [OBOL:automatic] [Term] id: pharyngeal_arch_skeleton_anatomical_structure_morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of ZFA:0001216 ! pharyngeal arch skeleton synonym: "pharyngeal arch skeleton anatomical structure morphogenesis" EXACT [OBOL:automatic] synonym: "pharyngeal arch skeleton morphogenesis" EXACT [OBOL:automatic] synonym: "pharyngeal skeleton morphogenesis" EXACT [OBOL:automatic] synonym: "splanchnocranium anatomical structure morphogenesis" EXACT [OBOL:automatic] synonym: "splanchnocranium morphogenesis" EXACT [OBOL:automatic] [Term] id: digit_anatomical_structure_morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of anatomy:digit synonym: "digit anatomical structure morphogenesis" EXACT [OBOL:automatic] synonym: "digit morphogenesis" EXACT [OBOL:automatic] [Term] id: structure_anatomical_structure_morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: OBO_REL:results_in_developmental_progression_of anatomy:structure synonym: "structure anatomical structure morphogenesis" EXACT [OBOL:automatic] synonym: "structure morphogenesis" EXACT [OBOL:automatic] [Term] id: photosystem_II_oxygen_evolving_complex intersection_of: GO:0009654 ! oxygen evolving complex intersection_of: OBO_REL:part_of GO:0009523 ! photosystem II synonym: "photosystem II oxygen evolving complex" EXACT [OBOL:automatic] def: "A oxygen evolving complex that is part of a photosystem II" [OBOL:automatic] [Term] id: heart_tube_anterior_/_posterior_pattern_formation intersection_of: GO:0009952 ! anterior/posterior pattern formation intersection_of: OBO_REL:unfolds_in ZFA:0000360 ! heart tube synonym: "heart tube anterior/posterior pattern formation" EXACT [OBOL:automatic] [Term] id: peroxisomal_fatty_acyl_transporter_membrane intersection_of: GO:0016020 ! membrane intersection_of: OBO_REL:part_of GO:0005777 ! peroxisome synonym: "peroxisomal fatty acyl transporter membrane" EXACT [OBOL:automatic] synonym: "peroxisomal membrane transporter membrane" EXACT [OBOL:automatic] synonym: "peroxisome membrane" EXACT [OBOL:automatic] synonym: "peroxisome receptor membrane" EXACT [OBOL:automatic] def: "A membrane that is part of a peroxisomal fatty acyl transporter" [OBOL:automatic] [Term] id: rhabdomere_membrane intersection_of: GO:0016020 ! membrane intersection_of: OBO_REL:part_of GO:0016028 ! rhabdomere synonym: "rhabdomere membrane" EXACT [OBOL:automatic] def: "A membrane that is part of a rhabdomere" [OBOL:automatic] [Term] id: olfactory_bulb_interneuron_precursor_migration intersection_of: GO:0016477 ! cell migration intersection_of: OBO_REL:results_in_movement_of interneuron_precursor intersection_of: OBO_REL:unfolds_in ZFA:0000402 ! olfactory bulb synonym: "olfactory bulb interneuron precursor migration" EXACT [OBOL:automatic] [Term] id: intracellular_viral_capsid intersection_of: GO:0019028 ! viral capsid intersection_of: contained_by ZFA:0009000 ! cell synonym: "intracellular viral capsid" EXACT [OBOL:automatic] synonym: "intracellular viral capsid (sensu Retroviridae)" EXACT [OBOL:automatic] [Term] id: morphogenesis_during_cell_differentiation intersection_of: GO:0030154 ! cell differentiation intersection_of: OBO_REL:results_in_acquisition_of_features_of cell:morphogenesis_during synonym: "morphogenesis during cell differentiation" EXACT [OBOL:automatic] synonym: "morphogenesis during differentiation" EXACT [OBOL:automatic] [Term] id: commissural_nerve_cell_cell_differentiation intersection_of: GO:0030182 ! neuron differentiation intersection_of: OBO_REL:results_in_developmental_progression_of anatomy:commissural synonym: "commissural nerve cell cell differentiation" EXACT [OBOL:automatic] synonym: "commissural nerve cell differentiation" EXACT [OBOL:automatic] synonym: "commissural neuron cell differentiation" EXACT [OBOL:automatic] synonym: "commissural neuron differentiation" EXACT [OBOL:automatic] [Term] id: upper_body_closure intersection_of: GO:0032502 ! developmental process intersection_of: OBO_REL:results_in_closure_of MA:0000022 ! thorax synonym: "thorax closure" EXACT [OBOL:automatic] synonym: "upper body closure" EXACT [OBOL:automatic] [Term] id: birth_or_egg_hatching intersection_of: GO:0035188 ! hatching intersection_of: OBO_REL:results_in_developmental_progression_of anatomy:birth_or_egg synonym: "birth or egg hatching" EXACT [OBOL:automatic] [Term] id: collagen_fibril intersection_of: GO:0043205 ! fibril intersection_of: OBO_REL:part_of GO:0005581 ! collagen synonym: "collagen fibril" EXACT [OBOL:automatic] synonym: "other collagen fibril" EXACT [OBOL:automatic] def: "A fibril that is part of a collagen" [OBOL:automatic] [Term] id: CAR_anatomical_structure_formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of GO:0005826 ! contractile ring synonym: "CAR anatomical structure formation" EXACT [OBOL:automatic] synonym: "CAR formation" EXACT [OBOL:automatic] synonym: "CAR formation of an anatomical structure" EXACT [OBOL:automatic] synonym: "actomyosin ring anatomical structure formation" EXACT [OBOL:automatic] synonym: "actomyosin ring formation" EXACT [OBOL:automatic] synonym: "actomyosin ring formation of an anatomical structure" EXACT [OBOL:automatic] synonym: "constriction ring anatomical structure formation" EXACT [OBOL:automatic] synonym: "constriction ring formation" EXACT [OBOL:automatic] synonym: "constriction ring formation of an anatomical structure" EXACT [OBOL:automatic] synonym: "contractile actomyosin ring anatomical structure formation" EXACT [OBOL:automatic] synonym: "contractile actomyosin ring formation" EXACT [OBOL:automatic] synonym: "contractile actomyosin ring formation of an anatomical structure" EXACT [OBOL:automatic] synonym: "contractile ring anatomical structure formation" EXACT [OBOL:automatic] synonym: "contractile ring formation" EXACT [OBOL:automatic] synonym: "contractile ring formation of an anatomical structure" EXACT [OBOL:automatic] [Term] id: epithelial_tube_anatomical_structure_formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of anatomy:epithelial_tube synonym: "epithelial tube anatomical structure formation" EXACT [OBOL:automatic] synonym: "epithelial tube formation" EXACT [OBOL:automatic] synonym: "epithelial tube formation of an anatomical structure" EXACT [OBOL:automatic] [Term] id: layer_anatomical_structure_formation intersection_of: GO:0048646 ! anatomical structure formation intersection_of: OBO_REL:results_in_formation_of anatomy:layer synonym: "layer anatomical structure formation" EXACT [OBOL:automatic] synonym: "layer formation" EXACT [OBOL:automatic] synonym: "layer formation of an anatomical structure" EXACT [OBOL:automatic] [Term] id: leg_joint intersection_of: MA:0000319 ! joint intersection_of: OBO_REL:part_of MA:0000047 ! leg synonym: "joint of leg" EXACT [OBOL:automatic] synonym: "joint of the leg" EXACT [OBOL:automatic] synonym: "leg joint" EXACT [OBOL:automatic] def: "A joint that is part of a leg" [OBOL:automatic] [Term] id: primary_shoot_apical_meristem intersection_of: PO:0020144 ! apical meristem intersection_of: OBO_REL:part_of PO:0006341 ! primary shoot synonym: "apical meristem of primary shoot" EXACT [OBOL:automatic] synonym: "apical meristem of the primary shoot" EXACT [OBOL:automatic] synonym: "primary shoot apical meristem" EXACT [OBOL:automatic] def: "A apical meristem that is part of a primary shoot" [OBOL:automatic] [Term] id: anterior_lateral_line_ganglia intersection_of: ZFA:0000190 ! ganglion intersection_of: OBO_REL:part_of ZFA:0001470 ! anterior lateral line synonym: "anterior lateral line ganglia" EXACT [OBOL:automatic] synonym: "anterior lateral line ganglion" EXACT [OBOL:automatic] def: "A ganglia that is part of a anterior lateral line" [OBOL:automatic] [Term] id: pll_lateral_line_neuromast intersection_of: ZFA:0000243 ! neuromast intersection_of: OBO_REL:part_of ZFA:0000944 ! posterior lateral line synonym: "lateral line neuromast of pll" EXACT [OBOL:automatic] synonym: "lateral line neuromast of the pll" EXACT [OBOL:automatic] synonym: "neuromast of pll" EXACT [OBOL:automatic] synonym: "neuromast of the pll" EXACT [OBOL:automatic] synonym: "neuromasts of pll" EXACT [OBOL:automatic] synonym: "neuromasts of the pll" EXACT [OBOL:automatic] synonym: "pll lateral line neuromast" EXACT [OBOL:automatic] synonym: "pll neuromasts" EXACT [OBOL:automatic] synonym: "posterior lateral line lateral line neuromast" EXACT [OBOL:automatic] synonym: "posterior lateral line neuromasts" EXACT [OBOL:automatic] def: "A lateral line neuromast that is part of a pll" [OBOL:automatic] [Term] id: anterior_lateral_line_lateral_line_neuromast intersection_of: ZFA:0000243 ! neuromast intersection_of: OBO_REL:part_of ZFA:0001470 ! anterior lateral line synonym: "anterior lateral line lateral line neuromast" EXACT [OBOL:automatic] synonym: "anterior lateral line neuromasts" EXACT [OBOL:automatic] def: "A lateral line neuromast that is part of a anterior lateral line" [OBOL:automatic] [Term] id: heart_cell intersection_of: ZFA:0009000 ! cell intersection_of: OBO_REL:part_of ZFA:0000114 ! heart synonym: "heart cell" EXACT [OBOL:automatic] def: "A cell that is part of a heart" [OBOL:automatic] [Term] id: notochord_cell intersection_of: ZFA:0009000 ! cell intersection_of: OBO_REL:part_of ZFA:0000135 ! notochord synonym: "notochord cell" EXACT [OBOL:automatic] def: "A cell that is part of a notochord" [OBOL:automatic] [Term] id: central_nervous_system_interneuron intersection_of: ZFA:0009051 ! interneuron intersection_of: OBO_REL:part_of ZFA:0000012 ! central nervous system synonym: "central nervous system interneuron" EXACT [OBOL:automatic] synonym: "cns interneuron" EXACT [OBOL:automatic] synonym: "interneuron of cns" EXACT [OBOL:automatic] synonym: "interneuron of the cns" EXACT [OBOL:automatic] def: "A interneuron that is part of a central nervous system" [OBOL:automatic] [Term] id: olfactory_bulb_interneuron intersection_of: ZFA:0009051 ! interneuron intersection_of: OBO_REL:part_of ZFA:0000402 ! olfactory bulb synonym: "olfactory bulb interneuron" EXACT [OBOL:automatic] def: "A interneuron that is part of a olfactory bulb" [OBOL:automatic] [Term] id: caudal_lateral_line_nerve_glial_cell intersection_of: ZFA:0009073 ! glial cell intersection_of: OBO_REL:part_of ZFA:0000175 ! posterior lateral line nerve synonym: "caudal lateral line nerve glial cell" EXACT [OBOL:automatic] synonym: "caudal lateral line nerve neuroglia" EXACT [OBOL:automatic] synonym: "glial cell of caudal lateral line nerve" EXACT [OBOL:automatic] synonym: "glial cell of posterior lateral line nerve" EXACT [OBOL:automatic] synonym: "glial cell of the caudal lateral line nerve" EXACT [OBOL:automatic] synonym: "glial cell of the posterior lateral line nerve" EXACT [OBOL:automatic] synonym: "neuroglia of caudal lateral line nerve" EXACT [OBOL:automatic] synonym: "neuroglia of posterior lateral line nerve" EXACT [OBOL:automatic] synonym: "neuroglia of the caudal lateral line nerve" EXACT [OBOL:automatic] synonym: "neuroglia of the posterior lateral line nerve" EXACT [OBOL:automatic] synonym: "posterior lateral line nerve glial cell" EXACT [OBOL:automatic] synonym: "posterior lateral line nerve neuroglia" EXACT [OBOL:automatic] def: "A glial cell that is part of a caudal lateral line nerve" [OBOL:automatic] [Term] id: anterior_lateral_line_nerve_glial_cell intersection_of: ZFA:0009073 ! glial cell intersection_of: OBO_REL:part_of ZFA:0000425 ! anterior lateral line nerve synonym: "anterior lateral line nerve glial cell" EXACT [OBOL:automatic] synonym: "anterior lateral line nerve neuroglia" EXACT [OBOL:automatic] synonym: "glial cell of anterior lateral line nerve" EXACT [OBOL:automatic] synonym: "glial cell of rostral lateral line nerve" EXACT [OBOL:automatic] synonym: "glial cell of the anterior lateral line nerve" EXACT [OBOL:automatic] synonym: "glial cell of the rostral lateral line nerve" EXACT [OBOL:automatic] synonym: "neuroglia of anterior lateral line nerve" EXACT [OBOL:automatic] synonym: "neuroglia of rostral lateral line nerve" EXACT [OBOL:automatic] synonym: "neuroglia of the anterior lateral line nerve" EXACT [OBOL:automatic] synonym: "neuroglia of the rostral lateral line nerve" EXACT [OBOL:automatic] synonym: "rostral lateral line nerve glial cell" EXACT [OBOL:automatic] synonym: "rostral lateral line nerve neuroglia" EXACT [OBOL:automatic] def: "A glial cell that is part of a anterior lateral line nerve" [OBOL:automatic] [Term] id: lateral_line_nerve_glial_cell intersection_of: ZFA:0009073 ! glial cell intersection_of: OBO_REL:part_of ZFA:0001479 ! lateral line nerve synonym: "lateral line nerve glial cell" EXACT [OBOL:automatic] synonym: "lateral line nerve neuroglia" EXACT [OBOL:automatic] def: "A glial cell that is part of a lateral line nerve" [OBOL:automatic] [Term] id: forebrain_astrocyte intersection_of: ZFA:0009075 ! astrocyte intersection_of: OBO_REL:part_of ZFA:0000109 ! forebrain synonym: "astrocyte of forebrain" EXACT [OBOL:automatic] synonym: "astrocyte of prosencephalon" EXACT [OBOL:automatic] synonym: "astrocyte of the forebrain" EXACT [OBOL:automatic] synonym: "astrocyte of the prosencephalon" EXACT [OBOL:automatic] synonym: "forebrain astrocyte" EXACT [OBOL:automatic] synonym: "prosencephalon astrocyte" EXACT [OBOL:automatic] def: "A astrocyte that is part of a forebrain" [OBOL:automatic] [Term] id: central_nervous_system_neuron intersection_of: ZFA:0009248 ! neuron intersection_of: OBO_REL:part_of ZFA:0000012 ! central nervous system synonym: "central nervous system neuron" EXACT [OBOL:automatic] synonym: "cns neuron" EXACT [OBOL:automatic] synonym: "neuron of cns" EXACT [OBOL:automatic] synonym: "neuron of the cns" EXACT [OBOL:automatic] def: "A neuron that is part of a central nervous system" [OBOL:automatic] [Term] id: forebrain_neuron intersection_of: ZFA:0009248 ! neuron intersection_of: OBO_REL:part_of ZFA:0000109 ! forebrain synonym: "forebrain neuron" EXACT [OBOL:automatic] synonym: "neuron of forebrain" EXACT [OBOL:automatic] synonym: "neuron of prosencephalon" EXACT [OBOL:automatic] synonym: "neuron of the forebrain" EXACT [OBOL:automatic] synonym: "neuron of the prosencephalon" EXACT [OBOL:automatic] synonym: "prosencephalon neuron" EXACT [OBOL:automatic] def: "A neuron that is part of a forebrain" [OBOL:automatic] [Term] id: peripheral_nervous_system_neuron intersection_of: ZFA:0009248 ! neuron intersection_of: OBO_REL:part_of ZFA:0000142 ! peripheral nervous system synonym: "neuron of pns" EXACT [OBOL:automatic] synonym: "neuron of the pns" EXACT [OBOL:automatic] synonym: "peripheral nervous system neuron" EXACT [OBOL:automatic] synonym: "pns neuron" EXACT [OBOL:automatic] def: "A neuron that is part of a peripheral nervous system" [OBOL:automatic]