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Gene Expression Data
Assay Details
Assay
Reference: J:198109 Oeschger FM, et al., Gene expression analysis of the embryonic subplate. Cereb Cortex. 2012 Jun;22(6):1343-59
Assay type: RNA in situ
MGI Accession ID: MGI:6258670
Gene symbol: Gabra5
Gene name: gamma-aminobutyric acid (GABA) A receptor, subunit alpha 5
Probe: Gabra5 cDNA3
Probe preparation: Antisense RNA labelled with digoxigenin
Visualized with: Alkaline phosphatase
Results
Specimen 2f: embryonic day 15.5 (more )
Structure Level Pattern Image Note
TS23: cortical subplate Present 2f
TS23: cortical plate Absent 2f

Specimen 3h wild-type: embryonic day 15.5 (more )
Structure Level Pattern Image Note
TS23: cortical subplate Present 3h Wild-type

Specimen 3h Reeler: embryonic day 15.5; Relnrl-Orl/Relnrl-Orl (more )
Structure Level Pattern Image Note
TS23: cerebral cortex Present Regionally restricted 3h Reeler Expression was shifted to the superplate in a broad band just below the cortical pial surface of the reeler mutant.

Specimen S3a E13.5: embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: cerebral cortex Present Regionally restricted S3a E13.5 Expression was detected in the lateral cortex.

Specimen S3a E14.5: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: cortical subplate Present S3a E14.5

Specimen S3a E15.5: embryonic day 15.5 (more )
Structure Level Pattern Image Note
TS23: cortical subplate Present Graded S3a E15.5 Anterior-posterior gradient was noted.

Specimen S3a E17.5: embryonic day 17.5 (more )
Structure Level Pattern Image Note
TS25: cortical plate Present Graded S3a E17.5 Anterior-posterior gradient was noted.
TS25: cortical subplate Present Graded S3a E17.5 Anterior-posterior gradient was noted.

Specimen S3a P8: postnatal day 8 (more )
Structure Level Pattern Image Note
TS28: cortical layer V Present S3a P8
TS28: cortical subplate Present S3a P8

Specimen S3a Adult: postnatal adult (more )
Structure Level Pattern Image Note
TS28: cortical layer V Present S3a Adult
TS28: cortical subplate Present S3a Adult

Specimen S4d: embryonic day 15.5 (more )
Structure Level Pattern Image Note
TS23: amygdala Present S4d
TS23: corpus striatum Present S4d
TS23: cortical subplate Present S4d
TS23: globus pallidus Present S4d
TS23: piriform cortex Present S4d

Specimen S4d': postnatal day 8 (more )
Structure Level Pattern Image Note
TS28: corpus striatum Present S4d'
TS28: cortical subplate Present S4d'
TS28: hippocampus Present S4d'
TS28: piriform cortex Present S4d'

Specimen not shown: embryonic day 13.5 (more )
Note: Table S5
Structure Level Pattern Image Note
TS22: hypothalamus Present
TS22: main olfactory bulb Present
TS22: piriform cortex Present

Specimen not shown: embryonic day 14.5 (more )
Note: Table S5
Structure Level Pattern Image Note
TS22: amygdala Present
TS22: basal ganglia Present
TS22: hypothalamus Present
TS22: main olfactory bulb Present
TS22: piriform cortex Present

Specimen not shown: embryonic day 15.5 (more )
Note: Table S5
Structure Level Pattern Image Note
TS23: amygdala Present
TS23: basal ganglia Present
TS23: hippocampus Present
TS23: hypothalamus Present
TS23: piriform cortex Present
TS23: telencephalon septum Present
TS23: olfactory cortex Present Regionally restricted Expression was detected in the olfactory tubercle.

Specimen not shown: embryonic day 17.5 (more )
Note: Table S5
Structure Level Pattern Image Note
TS25: basal ganglia Present
TS25: hypothalamus Present
TS25: main olfactory bulb Present
TS25: hippocampus Present Expression in the hippocampus includes the induseum griseum.

Specimen not shown: postnatal day 8 (more )
Note: Table S5
Structure Level Pattern Image Note
TS28: amygdala Present
TS28: claustrum Present
TS28: hippocampus Present
TS28: hypothalamus Present
TS28: piriform cortex Present
TS28: thalamus Present

Specimen not shown: postnatal adult (more )
Note: Table S5
Structure Level Pattern Image Note
TS28: claustrum Present
TS28: hippocampus Present
TS28: thalamus Ambiguous


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
07/29/2020
MGI 6.15
The Jackson Laboratory