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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4826408
Gene symbol: Mmp17
Gene name: matrix metallopeptidase 17
Probe: IMAGE clone 904649
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_000007_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Moderate Uniform euxassay_000007_01

Specimen euxassay_000007_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Moderate Uniform euxassay_000007_02

Specimen euxassay_000007_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Moderate Uniform euxassay_000007_03

Specimen euxassay_000007_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Moderate Uniform euxassay_000007_04

Specimen euxassay_000007_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon rest of alar plate mantle layer Moderate Regionally restricted euxassay_000007_05

Specimen euxassay_000007_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Moderate Uniform euxassay_000007_06
TS23: metencephalon rest of alar plate mantle layer Moderate Regionally restricted euxassay_000007_06

Specimen euxassay_000007_07: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Moderate Uniform euxassay_000007_07
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_000007_07 deep cerebellar nuclei
TS23: metencephalon rest of alar plate mantle layer Moderate Regionally restricted euxassay_000007_07 superficial reticular cells

Specimen euxassay_000007_08: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Moderate Uniform euxassay_000007_08
TS23: lentiform nucleus Weak Regionally restricted euxassay_000007_08
TS23: pallidum Present Regionally restricted euxassay_000007_08 ventricular layer
TS23: metencephalon rest of alar plate mantle layer Moderate Regionally restricted euxassay_000007_08

Specimen euxassay_000007_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Moderate Uniform euxassay_000007_09
TS23: caudate-putamen Weak Regionally restricted euxassay_000007_09
TS23: lentiform nucleus Weak Regionally restricted euxassay_000007_09
TS23: basal columns Moderate Single cells euxassay_000007_09

Specimen euxassay_000007_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Weak Uniform euxassay_000007_10
TS23: caudate-putamen Weak Regionally restricted euxassay_000007_10
TS23: lentiform nucleus Weak Regionally restricted euxassay_000007_10

Specimen euxassay_000007_11: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_000007_11 anterior prethalamus (eminentia thalamica)
TS23: thalamus mantle layer Moderate Uniform euxassay_000007_11
TS23: cerebral cortex mantle layer Weak Uniform euxassay_000007_11
TS23: caudate-putamen Weak Uniform euxassay_000007_11
TS23: lentiform nucleus Weak Uniform euxassay_000007_11
TS23: midbrain ventricular layer Weak Uniform euxassay_000007_11
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_000007_11 deep cerebellar nuclei
TS23: basal columns Moderate Single cells euxassay_000007_11
TS23: intermediate grey horn Moderate Single cells euxassay_000007_11
TS23: midbrain tegmentum Moderate Single cells euxassay_000007_11 two regions at both sides of the isthmic fosa

Specimen euxassay_000007_12: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: diencephalon lateral wall ventricular layer Moderate Regionally restricted euxassay_000007_12 prethalamic ventricular layer
TS23: basal columns Moderate Single cells euxassay_000007_12
TS23: midbrain ventricular layer Weak Uniform euxassay_000007_12
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_000007_12

Specimen euxassay_000007_13: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: thalamus ventricular layer Moderate Regionally restricted euxassay_000007_13 prethalamus ventricular layer
TS23: telencephalic part of interventricular foramen Moderate Regionally restricted euxassay_000007_13
TS23: telencephalon septum Present Regionally restricted euxassay_000007_13 ventricular layer

Specimen euxassay_000007_14: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_000007_14 anterior prethalamus (eminentia thalamica)
TS23: diencephalon lateral wall ventricular layer Moderate Regionally restricted euxassay_000007_14 prethalamus ventricular layer
TS23: midbrain tegmentum Moderate Single cells euxassay_000007_14 two domains at both sides of the isthmic fosa
TS23: telencephalic part of interventricular foramen Weak Regionally restricted euxassay_000007_14
TS23: telencephalon septum Present Regionally restricted euxassay_000007_14 ventricular layer
TS23: midbrain ventricular layer Weak Uniform euxassay_000007_14
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_000007_14 deep cerebellar nuclei

Specimen euxassay_000007_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Weak Uniform euxassay_000007_15
TS23: thalamus mantle layer Weak Uniform euxassay_000007_15
TS23: midbrain ventricular layer Weak Uniform euxassay_000007_15

Specimen euxassay_000007_16: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Weak Uniform euxassay_000007_16
TS23: pallidum Present Regionally restricted euxassay_000007_16 ventricular layer
TS23: lentiform nucleus Weak Uniform euxassay_000007_16
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_000007_16 superficial reticular cells

Specimen euxassay_000007_17: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: medulla oblongata alar plate marginal layer Moderate Regionally restricted euxassay_000007_17
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_000007_17 deep cerebellar nuclei
TS23: cerebral cortex mantle layer Moderate Uniform euxassay_000007_17
TS23: lentiform nucleus Weak Regionally restricted euxassay_000007_17
TS23: pallidum Present Regionally restricted euxassay_000007_17 ventricular layer

Specimen euxassay_000007_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Moderate Uniform euxassay_000007_18

Specimen euxassay_000007_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Moderate Uniform euxassay_000007_19

Specimen euxassay_000007_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Moderate Uniform euxassay_000007_20

Specimen euxassay_000007_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Strong Uniform euxassay_000007_21


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/12/2024
MGI 6.23
The Jackson Laboratory