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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4825817
Gene symbol: Kndc1
Gene name: kinase non-catalytic C-lobe domain (KIND) containing 1
Probe: T40555
Probe preparation: Antisense RNA labelled with digoxigenin
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_016551_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_016551_02

Specimen euxassay_016551_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_016551_03
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_016551_03
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_016551_03
TS23: trigeminal ganglion Moderate Single cells euxassay_016551_03

Specimen euxassay_016551_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_016551_04
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_016551_04
TS23: pons mantle layer Moderate Regionally restricted euxassay_016551_04
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_016551_04
TS23: trigeminal ganglion Weak Single cells euxassay_016551_04

Specimen euxassay_016551_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_016551_05
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_016551_05
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_016551_05
TS23: pons mantle layer Moderate Regionally restricted euxassay_016551_05
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_016551_05
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_016551_05
TS23: trigeminal ganglion Moderate Single cells euxassay_016551_05

Specimen euxassay_016551_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_016551_06
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_016551_06
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_016551_06
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_016551_06
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_016551_06
TS23: pons mantle layer Moderate Regionally restricted euxassay_016551_06
TS23: ventral grey horn Moderate Regionally restricted euxassay_016551_06
TS23: trigeminal ganglion Moderate Single cells euxassay_016551_06
TS23: dorsal root ganglion Weak Single cells euxassay_016551_06

Specimen euxassay_016551_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_016551_07
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_016551_07
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_016551_07
TS23: pons mantle layer Moderate Regionally restricted euxassay_016551_07
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_016551_07
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_016551_07
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_016551_07
TS23: ventral grey horn Moderate Regionally restricted euxassay_016551_07
TS23: trigeminal ganglion Moderate Single cells euxassay_016551_07

Specimen euxassay_016551_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_016551_08
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_016551_08
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_016551_08
TS23: pons mantle layer Moderate Regionally restricted euxassay_016551_08
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_016551_08
TS23: ventral grey horn Moderate Regionally restricted euxassay_016551_08
TS23: trigeminal ganglion Weak Single cells euxassay_016551_08

Specimen euxassay_016551_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_016551_09
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_016551_09
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_016551_09
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_016551_09
TS23: pons mantle layer Moderate Regionally restricted euxassay_016551_09
TS23: ventral grey horn Moderate Regionally restricted euxassay_016551_09

Specimen euxassay_016551_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_016551_10
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_016551_10
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_016551_10
TS23: pons mantle layer Moderate Regionally restricted euxassay_016551_10
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_016551_10
TS23: ventral grey horn Moderate Regionally restricted euxassay_016551_10

Specimen euxassay_016551_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_016551_11
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_016551_11
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_016551_11
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_016551_11
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_016551_11
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_016551_11
TS23: pons mantle layer Moderate Regionally restricted euxassay_016551_11
TS23: ventral grey horn Moderate Regionally restricted euxassay_016551_11

Specimen euxassay_016551_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_016551_12
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_016551_12
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_016551_12
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_016551_12
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_016551_12
TS23: pons mantle layer Moderate Regionally restricted euxassay_016551_12
TS23: ventral grey horn Moderate Regionally restricted euxassay_016551_12

Specimen euxassay_016551_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_016551_13
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_016551_13
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_016551_13
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_016551_13
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_016551_13
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_016551_13
TS23: pons mantle layer Moderate Regionally restricted euxassay_016551_13
TS23: ventral grey horn Moderate Regionally restricted euxassay_016551_13
TS23: dorsal root ganglion Moderate Single cells euxassay_016551_13

Specimen euxassay_016551_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex mantle layer Weak Regionally restricted euxassay_016551_14
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_016551_14
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_016551_14
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_016551_14
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_016551_14
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_016551_14
TS23: pons mantle layer Moderate Regionally restricted euxassay_016551_14
TS23: dorsal root ganglion Moderate Single cells euxassay_016551_14

Specimen euxassay_016551_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_016551_15
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_016551_15
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_016551_15
TS23: pons mantle layer Moderate Regionally restricted euxassay_016551_15
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_016551_15
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_016551_15
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_016551_15

Specimen euxassay_016551_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_016551_16
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_016551_16
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_016551_16
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_016551_16
TS23: pons mantle layer Moderate Regionally restricted euxassay_016551_16

Specimen euxassay_016551_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_016551_17
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_016551_17
TS23: olfactory cortex mantle layer Weak Regionally restricted euxassay_016551_17
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_016551_17

Specimen euxassay_016551_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex mantle layer Weak Regionally restricted euxassay_016551_18
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_016551_18
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_016551_18
TS23: trigeminal ganglion Weak Single cells euxassay_016551_18

Specimen euxassay_016551_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex mantle layer Weak Regionally restricted euxassay_016551_19
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_016551_19
TS23: trigeminal ganglion Weak Single cells euxassay_016551_19

Specimen euxassay_016551_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_016551_20

Specimen euxassay_016551_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_016551_21
TS23: trigeminal ganglion Weak Single cells euxassay_016551_21

Specimen euxassay_016551_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_016551_22

Specimen euxassay_016551_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_016551_23


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
11/05/2019
MGI 6.14
The Jackson Laboratory