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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4825698
Gene symbol: Kcna6
Gene name: potassium voltage-gated channel, shaker-related, subfamily, member 6
Probe: MGC clone 64781
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_011220_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_011220_01
Specimen euxassay_011220_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_011220_02
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_011220_02
TS23: neural retina Moderate Regionally restricted euxassay_011220_02
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_011220_02
Specimen euxassay_011220_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_011220_03
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_011220_03
TS23: neural retina Moderate Regionally restricted euxassay_011220_03
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_011220_03
Specimen euxassay_011220_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_011220_04
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_011220_04
TS23: neural retina Moderate Regionally restricted euxassay_011220_04
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_011220_04
Specimen euxassay_011220_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_011220_05
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_011220_05
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_011220_05
TS23: neural retina Moderate Regionally restricted euxassay_011220_05
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_011220_05
TS23: stomach Moderate Regionally restricted euxassay_011220_05
Specimen euxassay_011220_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_011220_06
TS23: facial ganglion Strong Regionally restricted euxassay_011220_06
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_011220_06
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_011220_06
TS23: rest of cerebellum mantle layer Moderate Uniform euxassay_011220_06
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_011220_06
TS23: stomach Moderate Regionally restricted euxassay_011220_06
Specimen euxassay_011220_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_011220_07
TS23: facial ganglion Strong Regionally restricted euxassay_011220_07
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_011220_07
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_011220_07
TS23: rest of cerebellum mantle layer Moderate Uniform euxassay_011220_07
TS23: midbrain mantle layer Moderate Uniform euxassay_011220_07
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_011220_07
TS23: stomach Moderate Regionally restricted euxassay_011220_07
Specimen euxassay_011220_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_011220_08
TS23: facial ganglion Strong Regionally restricted euxassay_011220_08
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_011220_08
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_011220_08
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_011220_08
TS23: midbrain mantle layer Moderate Uniform euxassay_011220_08
TS23: pons mantle layer Moderate Uniform euxassay_011220_08
TS23: rest of cerebellum mantle layer Moderate Uniform euxassay_011220_08
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_011220_08
TS23: stomach Moderate Regionally restricted euxassay_011220_08
Specimen euxassay_011220_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_011220_09
TS23: facial ganglion Strong Regionally restricted euxassay_011220_09
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_011220_09
TS23: dorsal root ganglion Strong Regionally restricted euxassay_011220_09
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_011220_09
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_011220_09
TS23: midbrain mantle layer Moderate Uniform euxassay_011220_09
TS23: pons mantle layer Moderate Uniform euxassay_011220_09
TS23: rest of cerebellum mantle layer Moderate Uniform euxassay_011220_09
TS23: medulla oblongata basal plate mantle layer Moderate Uniform euxassay_011220_09
TS23: hypothalamus mantle layer Moderate Uniform euxassay_011220_09
TS23: diencephalon lateral wall mantle layer Moderate Uniform euxassay_011220_09
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_011220_09
TS23: stomach Moderate Regionally restricted euxassay_011220_09
Specimen euxassay_011220_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal nerve Strong Regionally restricted euxassay_011220_10
TS23: trigeminal ganglion Strong Regionally restricted euxassay_011220_10
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_011220_10
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_011220_10
TS23: dorsal root ganglion Strong Regionally restricted euxassay_011220_10
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_011220_10
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_011220_10
TS23: midbrain mantle layer Moderate Uniform euxassay_011220_10
TS23: pons mantle layer Moderate Uniform euxassay_011220_10
TS23: rest of cerebellum mantle layer Moderate Uniform euxassay_011220_10
TS23: medulla oblongata basal plate mantle layer Moderate Uniform euxassay_011220_10
TS23: diencephalon lateral wall mantle layer Moderate Uniform euxassay_011220_10
TS23: hypothalamus mantle layer Moderate Uniform euxassay_011220_10
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_011220_10
TS23: stomach Moderate Regionally restricted euxassay_011220_10
Specimen euxassay_011220_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_011220_11
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_011220_11
TS23: dorsal root ganglion Strong Regionally restricted euxassay_011220_11
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_011220_11
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_011220_11
TS23: midbrain mantle layer Moderate Uniform euxassay_011220_11
TS23: pons mantle layer Moderate Uniform euxassay_011220_11
TS23: rest of cerebellum mantle layer Moderate Uniform euxassay_011220_11
TS23: medulla oblongata basal plate mantle layer Moderate Uniform euxassay_011220_11
TS23: hypothalamus mantle layer Moderate Uniform euxassay_011220_11
TS23: diencephalon lateral wall mantle layer Moderate Uniform euxassay_011220_11
TS23: spinal cord mantle layer Moderate Regionally restricted euxassay_011220_11
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_011220_11
TS23: stomach Moderate Regionally restricted euxassay_011220_11
Specimen euxassay_011220_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal nerve Moderate Regionally restricted euxassay_011220_12
TS23: trigeminal ganglion Strong Regionally restricted euxassay_011220_12
TS23: dorsal root ganglion Strong Regionally restricted euxassay_011220_12
TS23: olfactory cortex marginal layer Strong Regionally restricted euxassay_011220_12
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_011220_12
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_011220_12
TS23: midbrain mantle layer Moderate Uniform euxassay_011220_12
TS23: pons mantle layer Moderate Uniform euxassay_011220_12
TS23: rest of cerebellum mantle layer Moderate Uniform euxassay_011220_12
TS23: medulla oblongata basal plate mantle layer Moderate Uniform euxassay_011220_12
TS23: hypothalamus mantle layer Moderate Uniform euxassay_011220_12
TS23: diencephalon lateral wall mantle layer Moderate Uniform euxassay_011220_12
TS23: spinal cord mantle layer Moderate Regionally restricted euxassay_011220_12
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_011220_12
Specimen euxassay_011220_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex marginal layer Strong Regionally restricted euxassay_011220_13
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_011220_13
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_011220_13
TS23: midbrain mantle layer Moderate Uniform euxassay_011220_13
TS23: pons mantle layer Moderate Uniform euxassay_011220_13
TS23: rest of cerebellum mantle layer Moderate Uniform euxassay_011220_13
TS23: medulla oblongata basal plate mantle layer Moderate Uniform euxassay_011220_13
TS23: hypothalamus mantle layer Moderate Uniform euxassay_011220_13
TS23: diencephalon lateral wall mantle layer Moderate Uniform euxassay_011220_13
TS23: spinal cord mantle layer Moderate Regionally restricted euxassay_011220_13
TS23: tail mesenchyme Moderate Regionally restricted euxassay_011220_13
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_011220_13
Specimen euxassay_011220_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex marginal layer Strong Regionally restricted euxassay_011220_14
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_011220_14
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_011220_14
TS23: midbrain mantle layer Moderate Uniform euxassay_011220_14
TS23: pons mantle layer Moderate Uniform euxassay_011220_14
TS23: rest of cerebellum mantle layer Moderate Uniform euxassay_011220_14
TS23: medulla oblongata basal plate mantle layer Moderate Uniform euxassay_011220_14
TS23: hypothalamus mantle layer Moderate Uniform euxassay_011220_14
TS23: diencephalon lateral wall mantle layer Moderate Uniform euxassay_011220_14
TS23: spinal cord mantle layer Moderate Regionally restricted euxassay_011220_14
TS23: tail mesenchyme Moderate Regionally restricted euxassay_011220_14
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_011220_14
Specimen euxassay_011220_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_011220_15
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_011220_15
TS23: midbrain mantle layer Moderate Uniform euxassay_011220_15
TS23: pons mantle layer Moderate Uniform euxassay_011220_15
TS23: rest of cerebellum mantle layer Moderate Uniform euxassay_011220_15
TS23: medulla oblongata basal plate mantle layer Moderate Uniform euxassay_011220_15
TS23: hypothalamus mantle layer Moderate Uniform euxassay_011220_15
TS23: diencephalon lateral wall mantle layer Moderate Uniform euxassay_011220_15
TS23: spinal cord mantle layer Moderate Regionally restricted euxassay_011220_15
TS23: tail mesenchyme Moderate Regionally restricted euxassay_011220_15
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_011220_15
Specimen euxassay_011220_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_011220_16
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_011220_16
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_011220_16
TS23: midbrain mantle layer Moderate Uniform euxassay_011220_16
TS23: pons mantle layer Moderate Uniform euxassay_011220_16
TS23: rest of cerebellum mantle layer Moderate Uniform euxassay_011220_16
TS23: medulla oblongata basal plate mantle layer Moderate Uniform euxassay_011220_16
TS23: hypothalamus mantle layer Moderate Uniform euxassay_011220_16
TS23: diencephalon lateral wall mantle layer Moderate Uniform euxassay_011220_16
TS23: spinal cord mantle layer Moderate Regionally restricted euxassay_011220_16
TS23: tail mesenchyme Moderate Regionally restricted euxassay_011220_16
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_011220_16
Specimen euxassay_011220_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_011220_17
TS23: olfactory cortex marginal layer Strong Regionally restricted euxassay_011220_17
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_011220_17
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_011220_17
TS23: medulla oblongata basal plate mantle layer Moderate Uniform euxassay_011220_17
TS23: rest of cerebellum mantle layer Moderate Uniform euxassay_011220_17
TS23: pons mantle layer Moderate Uniform euxassay_011220_17
TS23: midbrain mantle layer Moderate Uniform euxassay_011220_17
TS23: hypothalamus mantle layer Moderate Uniform euxassay_011220_17
TS23: diencephalon lateral wall mantle layer Moderate Uniform euxassay_011220_17
TS23: spinal cord mantle layer Moderate Regionally restricted euxassay_011220_17
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_011220_17
TS23: tail mesenchyme Moderate Regionally restricted euxassay_011220_17
Specimen euxassay_011220_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal nerve Moderate Regionally restricted euxassay_011220_18
TS23: trigeminal ganglion Strong Regionally restricted euxassay_011220_18
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_011220_18
TS23: dorsal root ganglion Strong Regionally restricted euxassay_011220_18
TS23: olfactory cortex marginal layer Strong Regionally restricted euxassay_011220_18
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_011220_18
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_011220_18
TS23: midbrain mantle layer Moderate Uniform euxassay_011220_18
TS23: pons mantle layer Moderate Uniform euxassay_011220_18
TS23: rest of cerebellum mantle layer Moderate Uniform euxassay_011220_18
TS23: medulla oblongata basal plate mantle layer Moderate Uniform euxassay_011220_18
TS23: hypothalamus mantle layer Moderate Uniform euxassay_011220_18
TS23: diencephalon lateral wall mantle layer Moderate Uniform euxassay_011220_18
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_011220_18
Specimen euxassay_011220_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_011220_19
TS23: trigeminal ganglion Strong Regionally restricted euxassay_011220_19
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_011220_19
TS23: trigeminal nerve Moderate Regionally restricted euxassay_011220_19
TS23: dorsal root ganglion Strong Regionally restricted euxassay_011220_19
TS23: olfactory cortex marginal layer Strong Regionally restricted euxassay_011220_19
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_011220_19
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_011220_19
TS23: rest of cerebellum mantle layer Moderate Uniform euxassay_011220_19
TS23: pons mantle layer Moderate Uniform euxassay_011220_19
TS23: midbrain mantle layer Moderate Uniform euxassay_011220_19
TS23: medulla oblongata basal plate mantle layer Moderate Uniform euxassay_011220_19
TS23: diencephalon lateral wall mantle layer Moderate Uniform euxassay_011220_19
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_011220_19
Specimen euxassay_011220_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal nerve Moderate Regionally restricted euxassay_011220_20
TS23: trigeminal ganglion Strong Regionally restricted euxassay_011220_20
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_011220_20
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_011220_20
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_011220_20
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_011220_20
TS23: rest of cerebellum mantle layer Moderate Uniform euxassay_011220_20
TS23: midbrain mantle layer Moderate Uniform euxassay_011220_20
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_011220_20
Specimen euxassay_011220_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_011220_21
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_011220_21
TS23: facial ganglion Strong Regionally restricted euxassay_011220_21
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_011220_21
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_011220_21
TS23: rest of cerebellum mantle layer Moderate Uniform euxassay_011220_21
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_011220_21
Specimen euxassay_011220_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_011220_22
TS23: facial ganglion Strong Regionally restricted euxassay_011220_22
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_011220_22
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_011220_22
TS23: rest of cerebellum mantle layer Moderate Uniform euxassay_011220_22
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_011220_22
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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory