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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4825457
Gene symbol: Hs6st2
Gene name: heparan sulfate 6-O-sulfotransferase 2
Modification date: 09/14/2010
Probe: T31908
Probe preparation: Antisense RNA labelled with digoxigenin
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_014425_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_014425_01
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_014425_01

Specimen euxassay_014425_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_014425_02
TS23: hindlimb digit 1 phalanx Weak Regionally restricted euxassay_014425_02
TS23: hindlimb digit 3 phalanx Weak Regionally restricted euxassay_014425_02
TS23: hindlimb digit 2 phalanx Weak Regionally restricted euxassay_014425_02
TS23: hindlimb digit 1 metatarsal Weak Regionally restricted euxassay_014425_02
TS23: hindlimb digit 2 metatarsal Weak Regionally restricted euxassay_014425_02
TS23: hindlimb digit 3 metatarsal Weak Regionally restricted euxassay_014425_02
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_014425_02

Specimen euxassay_014425_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_014425_03
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_014425_03
TS23: hindlimb digit 1 metatarsal Weak Regionally restricted euxassay_014425_03
TS23: hindlimb digit 2 metatarsal Weak Regionally restricted euxassay_014425_03
TS23: hindlimb digit 3 metatarsal Weak Regionally restricted euxassay_014425_03
TS23: hindlimb digit 4 metatarsal Weak Regionally restricted euxassay_014425_03
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_014425_03

Specimen euxassay_014425_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_014425_04
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_014425_04
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_014425_04

Specimen euxassay_014425_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_014425_05
TS23: pons mantle layer Strong Regionally restricted euxassay_014425_05
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_014425_05

Specimen euxassay_014425_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_014425_06
TS23: pons mantle layer Weak Regionally restricted euxassay_014425_06

Specimen euxassay_014425_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: thalamus mantle layer Strong Regionally restricted euxassay_014425_07
TS23: pons mantle layer Moderate Regionally restricted euxassay_014425_07
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_014425_07

Specimen euxassay_014425_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: thalamus mantle layer Strong Regionally restricted euxassay_014425_08
TS23: pons mantle layer Moderate Regionally restricted euxassay_014425_08
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_014425_08

Specimen euxassay_014425_09: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: thalamus mantle layer Strong Regionally restricted euxassay_014425_09
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_014425_09
TS23: pons mantle layer Strong Regionally restricted euxassay_014425_09
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_014425_09
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_014425_09
TS23: midbrain-hindbrain junction Present euxassay_014425_09

Specimen euxassay_014425_10: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_014425_10
TS23: pons mantle layer Strong Regionally restricted euxassay_014425_10
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_014425_10
TS23: ventral grey horn Moderate Regionally restricted euxassay_014425_10
TS23: midbrain mantle layer Strong Regionally restricted euxassay_014425_10
TS23: midbrain-hindbrain junction Present euxassay_014425_10

Specimen euxassay_014425_11: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_014425_11
TS23: pons mantle layer Strong Regionally restricted euxassay_014425_11
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_014425_11
TS23: ventral grey horn Moderate Regionally restricted euxassay_014425_11
TS23: midbrain mantle layer Strong Regionally restricted euxassay_014425_11
TS23: midbrain-hindbrain junction Present euxassay_014425_11

Specimen euxassay_014425_12: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_014425_12
TS23: ventral grey horn Moderate Regionally restricted euxassay_014425_12
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_014425_12
TS23: midbrain-hindbrain junction Present euxassay_014425_12

Specimen euxassay_014425_13: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: thalamus mantle layer Strong Regionally restricted euxassay_014425_13
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_014425_13
TS23: pons mantle layer Strong Regionally restricted euxassay_014425_13
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_014425_13
TS23: ventral grey horn Moderate Regionally restricted euxassay_014425_13
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_014425_13
TS23: midbrain-hindbrain junction Present euxassay_014425_13

Specimen euxassay_014425_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: thalamus mantle layer Strong Regionally restricted euxassay_014425_14
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_014425_14
TS23: pons mantle layer Strong Regionally restricted euxassay_014425_14
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_014425_14
TS23: ventral grey horn Moderate Regionally restricted euxassay_014425_14

Specimen euxassay_014425_15: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: thalamus mantle layer Strong Regionally restricted euxassay_014425_15
TS23: pons mantle layer Strong Regionally restricted euxassay_014425_15
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_014425_15
TS23: ventral grey horn Moderate Regionally restricted euxassay_014425_15
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_014425_15
TS23: midbrain-hindbrain junction Present euxassay_014425_15

Specimen euxassay_014425_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pons mantle layer Strong Regionally restricted euxassay_014425_16

Specimen euxassay_014425_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_014425_17
TS23: pons mantle layer Strong Regionally restricted euxassay_014425_17
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_014425_17

Specimen euxassay_014425_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_014425_18
TS23: pons mantle layer Strong Regionally restricted euxassay_014425_18
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_014425_18

Specimen euxassay_014425_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_014425_19
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_014425_19

Specimen euxassay_014425_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_014425_20
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_014425_20

Specimen euxassay_014425_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_014425_21
TS23: hindlimb digit 1 metatarsal Weak Regionally restricted euxassay_014425_21
TS23: hindlimb digit 2 metatarsal Weak Regionally restricted euxassay_014425_21
TS23: hindlimb digit 3 metatarsal Weak Regionally restricted euxassay_014425_21
TS23: hindlimb digit 4 metatarsal Weak Regionally restricted euxassay_014425_21
TS23: hindlimb digit 5 metatarsal Weak Regionally restricted euxassay_014425_21
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_014425_21

Specimen euxassay_014425_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: hindlimb digit 1 metatarsal Weak Regionally restricted euxassay_014425_22
TS23: hindlimb digit 2 phalanx Weak Regionally restricted euxassay_014425_22
TS23: hindlimb digit 3 phalanx Weak Regionally restricted euxassay_014425_22
TS23: hindlimb digit 5 phalanx Weak Regionally restricted euxassay_014425_22
TS23: hindlimb digit 4 phalanx Weak Regionally restricted euxassay_014425_22
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_014425_22

Specimen euxassay_014425_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: hindlimb digit 1 metatarsal Weak Regionally restricted euxassay_014425_23
TS23: hindlimb digit 2 metatarsal Weak Regionally restricted euxassay_014425_23
TS23: hindlimb digit 3 metatarsal Weak Regionally restricted euxassay_014425_23
TS23: hindlimb digit 4 metatarsal Weak Regionally restricted euxassay_014425_23


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last database update
11/07/2017
MGI 6.11
The Jackson Laboratory