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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4824956
Gene symbol: Fzd9
Gene name: frizzled class receptor 9
Probe: T35161
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen Table S8: embryonic day 14.5 (more )
Note: The annotations provided in this table refer to the entire set of Eurexpress images; thus the displayed image may not include the structures referred to in the annotations.
Structure Level Pattern Image Note
TS23: neocortex Moderate euxassay_008309_12
TS23: hippocampus Strong euxassay_008309_12
TS23: corpus striatum Absent euxassay_008309_12
TS23: telencephalon septum Weak euxassay_008309_12
TS23: thalamus Moderate euxassay_008309_12
TS23: hypothalamus Absent euxassay_008309_12
TS23: pretectum Absent euxassay_008309_12
TS23: superior colliculus Absent euxassay_008309_12
TS23: inferior colliculus Absent euxassay_008309_12
TS23: midbrain tegmentum Moderate euxassay_008309_12
TS23: cerebellum Absent euxassay_008309_12
TS23: spinal cord Absent euxassay_008309_12
TS23: skin Absent euxassay_008309_12
TS23: lung Absent euxassay_008309_12
TS23: metanephros Absent euxassay_008309_12
TS23: liver Absent euxassay_008309_12
TS23: thyroid gland Absent euxassay_008309_12
TS23: pituitary gland Absent euxassay_008309_12
TS23: pancreas Absent euxassay_008309_12
TS23: adrenal gland Absent euxassay_008309_12
TS23: heart Absent euxassay_008309_12
TS23: thymus primordium Absent euxassay_008309_12
TS23: vertebral axis musculature Absent euxassay_008309_12
TS23: axial skeleton Moderate euxassay_008309_12

Specimen euxassay_008309_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Moderate Regionally restricted euxassay_008309_01
TS23: basisphenoid bone Moderate Regionally restricted euxassay_008309_01
TS23: basioccipital bone Moderate Regionally restricted euxassay_008309_01
TS23: temporal bone petrous part Moderate Regionally restricted euxassay_008309_01
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_008309_01
TS23: fibula Weak Regionally restricted euxassay_008309_01
TS23: tibia Weak Regionally restricted euxassay_008309_01

Specimen euxassay_008309_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Moderate Regionally restricted euxassay_008309_02
TS23: temporal bone petrous part Moderate Regionally restricted euxassay_008309_02
TS23: exoccipital bone Moderate Regionally restricted euxassay_008309_02
TS23: basioccipital bone Moderate Regionally restricted euxassay_008309_02
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_008309_02
TS23: tarsus Weak Regionally restricted euxassay_008309_02
TS23: hindlimb digit 1 metatarsal Weak Regionally restricted euxassay_008309_02
TS23: hindlimb digit 2 metatarsal Weak Regionally restricted euxassay_008309_02
TS23: hindlimb digit 3 metatarsal Weak Regionally restricted euxassay_008309_02

Specimen euxassay_008309_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Moderate Regionally restricted euxassay_008309_03
TS23: exoccipital bone Moderate Regionally restricted euxassay_008309_03
TS23: temporal bone petrous part Moderate Regionally restricted euxassay_008309_03
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_008309_03
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_008309_03
TS23: tarsus Weak Regionally restricted euxassay_008309_03
TS23: hindlimb digit 1 phalanx Weak Regionally restricted euxassay_008309_03
TS23: hindlimb digit 1 metatarsal Weak Regionally restricted euxassay_008309_03
TS23: hindlimb digit 2 metatarsal Weak Regionally restricted euxassay_008309_03
TS23: hindlimb digit 3 phalanx Weak Regionally restricted euxassay_008309_03
TS23: hindlimb digit 3 metatarsal Weak Regionally restricted euxassay_008309_03
TS23: hindlimb digit 4 metatarsal Weak Regionally restricted euxassay_008309_03
TS23: humerus Moderate Regionally restricted euxassay_008309_03

Specimen euxassay_008309_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Moderate Regionally restricted euxassay_008309_04
TS23: temporal bone petrous part Moderate Regionally restricted euxassay_008309_04
TS23: exoccipital bone Moderate Regionally restricted euxassay_008309_04
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_008309_04
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_008309_04
TS23: hindlimb digit 5 metatarsal Weak Regionally restricted euxassay_008309_04
TS23: hindlimb digit 4 metatarsal Weak Regionally restricted euxassay_008309_04
TS23: hindlimb digit 3 metatarsal Weak Regionally restricted euxassay_008309_04
TS23: hindlimb digit 3 phalanx Weak Regionally restricted euxassay_008309_04
TS23: hindlimb digit 4 phalanx Weak Regionally restricted euxassay_008309_04
TS23: humerus Weak Regionally restricted euxassay_008309_04

Specimen euxassay_008309_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Moderate Regionally restricted euxassay_008309_05
TS23: temporal bone petrous part Strong Regionally restricted euxassay_008309_05
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_008309_05
TS23: pons ventricular layer Moderate Regionally restricted euxassay_008309_05
TS23: humerus Weak Regionally restricted euxassay_008309_05

Specimen euxassay_008309_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Moderate Regionally restricted euxassay_008309_06
TS23: orbito-sphenoid Strong Regionally restricted euxassay_008309_06
TS23: temporal bone petrous part Strong Regionally restricted euxassay_008309_06
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_008309_06
TS23: pons ventricular layer Moderate Regionally restricted euxassay_008309_06

Specimen euxassay_008309_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Moderate Regionally restricted euxassay_008309_07
TS23: orbito-sphenoid Strong Regionally restricted euxassay_008309_07
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_008309_07
TS23: pons ventricular layer Moderate Regionally restricted euxassay_008309_07
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_008309_07
TS23: femur Moderate Regionally restricted euxassay_008309_07

Specimen euxassay_008309_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Moderate Regionally restricted euxassay_008309_08
TS23: orbito-sphenoid Strong Regionally restricted euxassay_008309_08
TS23: turbinate bone primordium Strong Regionally restricted euxassay_008309_08
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_008309_08
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_008309_08
TS23: pons ventricular layer Moderate Regionally restricted euxassay_008309_08
TS23: midbrain ventricular layer Weak Regionally restricted euxassay_008309_08
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_008309_08
TS23: otic capsule Strong Regionally restricted euxassay_008309_08
TS23: femur Weak Regionally restricted euxassay_008309_08

Specimen euxassay_008309_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Moderate Regionally restricted euxassay_008309_09
TS23: turbinate bone primordium Strong Regionally restricted euxassay_008309_09
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_008309_09
TS23: pons ventricular layer Moderate Regionally restricted euxassay_008309_09
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_008309_09
TS23: midbrain ventricular layer Weak Regionally restricted euxassay_008309_09
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_008309_09
TS23: otic capsule Strong Regionally restricted euxassay_008309_09
TS23: clavicle Weak Regionally restricted euxassay_008309_09
TS23: femur Moderate Regionally restricted euxassay_008309_09
TS23: axial skeleton cervical region Moderate Regionally restricted euxassay_008309_09

Specimen euxassay_008309_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Moderate Regionally restricted euxassay_008309_10
TS23: turbinate bone primordium Strong Regionally restricted euxassay_008309_10
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_008309_10
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_008309_10
TS23: pons ventricular layer Moderate Regionally restricted euxassay_008309_10
TS23: midbrain ventricular layer Weak Regionally restricted euxassay_008309_10
TS23: submandibular gland primordium Weak Regionally restricted euxassay_008309_10
TS23: otic capsule Strong Regionally restricted euxassay_008309_10
TS23: clavicle Moderate Regionally restricted euxassay_008309_10

Specimen euxassay_008309_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Moderate Regionally restricted euxassay_008309_11
TS23: turbinate bone primordium Strong Regionally restricted euxassay_008309_11
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_008309_11
TS23: pons ventricular layer Moderate Regionally restricted euxassay_008309_11
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_008309_11
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_008309_11
TS23: diencephalon lateral wall ventricular layer Moderate Regionally restricted euxassay_008309_11
TS23: hypothalamus ventricular layer Moderate Regionally restricted euxassay_008309_11
TS23: spinal cord ventricular layer Moderate Regionally restricted euxassay_008309_11
TS23: thyroid cartilage Moderate Regionally restricted euxassay_008309_11
TS23: axial skeleton thoracic region Moderate Regionally restricted euxassay_008309_11
TS23: axial skeleton lumbar region Moderate Regionally restricted euxassay_008309_11

Specimen euxassay_008309_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Moderate Regionally restricted euxassay_008309_12
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_008309_12
TS23: pons ventricular layer Moderate Regionally restricted euxassay_008309_12
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_008309_12
TS23: hypothalamus ventricular layer Weak Regionally restricted euxassay_008309_12
TS23: diencephalon lateral wall ventricular layer Weak Regionally restricted euxassay_008309_12
TS23: midbrain ventricular layer Weak Regionally restricted euxassay_008309_12
TS23: spinal cord ventricular layer Moderate Regionally restricted euxassay_008309_12
TS23: thyroid cartilage Moderate Regionally restricted euxassay_008309_12
TS23: cricoid cartilage Moderate Regionally restricted euxassay_008309_12
TS23: nasal septum Moderate Regionally restricted euxassay_008309_12
TS23: axial skeleton thoracic region Moderate Regionally restricted euxassay_008309_12
TS23: axial skeleton lumbar region Moderate Regionally restricted euxassay_008309_12

Specimen euxassay_008309_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Moderate Regionally restricted euxassay_008309_13
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_008309_13
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_008309_13
TS23: pons ventricular layer Moderate Regionally restricted euxassay_008309_13
TS23: midbrain ventricular layer Weak Regionally restricted euxassay_008309_13
TS23: diencephalon lateral wall ventricular layer Weak Regionally restricted euxassay_008309_13
TS23: hypothalamus ventricular layer Weak Regionally restricted euxassay_008309_13
TS23: spinal cord ventricular layer Moderate Regionally restricted euxassay_008309_13
TS23: thyroid cartilage Moderate Regionally restricted euxassay_008309_13
TS23: trachea Moderate Regionally restricted euxassay_008309_13
TS23: nasal septum Moderate Regionally restricted euxassay_008309_13
TS23: mandible Moderate Regionally restricted euxassay_008309_13
TS23: axial skeleton thoracic region Moderate Regionally restricted euxassay_008309_13
TS23: axial skeleton lumbar region Moderate Regionally restricted euxassay_008309_13

Specimen euxassay_008309_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Moderate Regionally restricted euxassay_008309_14
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_008309_14
TS23: pons ventricular layer Moderate Regionally restricted euxassay_008309_14
TS23: hypothalamus ventricular layer Weak Regionally restricted euxassay_008309_14
TS23: diencephalon lateral wall ventricular layer Weak Regionally restricted euxassay_008309_14
TS23: midbrain ventricular layer Weak Regionally restricted euxassay_008309_14
TS23: thyroid cartilage Moderate Regionally restricted euxassay_008309_14
TS23: cricoid cartilage Moderate Regionally restricted euxassay_008309_14
TS23: trachea Moderate Regionally restricted euxassay_008309_14
TS23: nasal septum Moderate Regionally restricted euxassay_008309_14
TS23: mandible Moderate Regionally restricted euxassay_008309_14
TS23: axial skeleton thoracic region Moderate Regionally restricted euxassay_008309_14
TS23: axial skeleton lumbar region Moderate Regionally restricted euxassay_008309_14
TS23: axial skeleton sacral region Moderate Regionally restricted euxassay_008309_14

Specimen euxassay_008309_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Moderate Regionally restricted euxassay_008309_15
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_008309_15
TS23: pons ventricular layer Moderate Regionally restricted euxassay_008309_15
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_008309_15
TS23: midbrain ventricular layer Weak Regionally restricted euxassay_008309_15
TS23: cricoid cartilage Moderate Regionally restricted euxassay_008309_15
TS23: nasal septum Moderate Regionally restricted euxassay_008309_15
TS23: mandible Moderate Regionally restricted euxassay_008309_15
TS23: axial skeleton thoracic region Moderate Regionally restricted euxassay_008309_15
TS23: axial skeleton sacral region Moderate Regionally restricted euxassay_008309_15
TS23: axial skeleton lumbar region Moderate Regionally restricted euxassay_008309_15
TS23: axial skeleton cervical region Moderate Regionally restricted euxassay_008309_15

Specimen euxassay_008309_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Moderate Regionally restricted euxassay_008309_16
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_008309_16
TS23: pons ventricular layer Moderate Regionally restricted euxassay_008309_16
TS23: midbrain ventricular layer Weak Regionally restricted euxassay_008309_16
TS23: otic capsule Strong Regionally restricted euxassay_008309_16
TS23: clavicle Weak Regionally restricted euxassay_008309_16
TS23: nasal septum Moderate Regionally restricted euxassay_008309_16
TS23: axial skeleton lumbar region Moderate Regionally restricted euxassay_008309_16
TS23: axial skeleton cervical region Moderate Regionally restricted euxassay_008309_16
TS23: axial skeleton thoracic region Moderate Regionally restricted euxassay_008309_16

Specimen euxassay_008309_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Moderate Regionally restricted euxassay_008309_17
TS23: turbinate bone primordium Strong Regionally restricted euxassay_008309_17
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_008309_17
TS23: pons ventricular layer Strong Regionally restricted euxassay_008309_17
TS23: submandibular gland primordium Weak Regionally restricted euxassay_008309_17
TS23: otic capsule Strong Regionally restricted euxassay_008309_17
TS23: clavicle Weak Regionally restricted euxassay_008309_17
TS23: nasal septum Moderate Regionally restricted euxassay_008309_17
TS23: axial skeleton cervical region Moderate Regionally restricted euxassay_008309_17
TS23: axial skeleton lumbar region Moderate Regionally restricted euxassay_008309_17

Specimen euxassay_008309_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Moderate Regionally restricted euxassay_008309_18
TS23: temporal bone petrous part Strong Regionally restricted euxassay_008309_18
TS23: turbinate bone primordium Strong Regionally restricted euxassay_008309_18
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_008309_18
TS23: pons ventricular layer Moderate Regionally restricted euxassay_008309_18
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_008309_18
TS23: axial skeleton cervical region Moderate Regionally restricted euxassay_008309_18

Specimen euxassay_008309_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Moderate Regionally restricted euxassay_008309_19
TS23: turbinate bone primordium Strong Regionally restricted euxassay_008309_19
TS23: orbito-sphenoid Strong Regionally restricted euxassay_008309_19
TS23: temporal bone petrous part Strong Regionally restricted euxassay_008309_19
TS23: exoccipital bone Moderate Regionally restricted euxassay_008309_19
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_008309_19
TS23: pons ventricular layer Moderate Regionally restricted euxassay_008309_19
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_008309_19
TS23: femur Weak Regionally restricted euxassay_008309_19

Specimen euxassay_008309_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Moderate Regionally restricted euxassay_008309_20
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_008309_20
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_008309_20
TS23: temporal bone petrous part Moderate Regionally restricted euxassay_008309_20
TS23: exoccipital bone Moderate Regionally restricted euxassay_008309_20
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_008309_20
TS23: pons ventricular layer Weak Regionally restricted euxassay_008309_20
TS23: femur Weak Regionally restricted euxassay_008309_20

Specimen euxassay_008309_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Moderate Regionally restricted euxassay_008309_21
TS23: temporal bone petrous part Moderate Regionally restricted euxassay_008309_21
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_008309_21
TS23: exoccipital bone Moderate Regionally restricted euxassay_008309_21
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_008309_21
TS23: rest of cerebellum ventricular layer Weak Regionally restricted euxassay_008309_21
TS23: humerus Weak Regionally restricted euxassay_008309_21

Specimen euxassay_008309_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Moderate Regionally restricted euxassay_008309_22
TS23: temporal bone petrous part Moderate Regionally restricted euxassay_008309_22
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_008309_22
TS23: humerus Weak Regionally restricted euxassay_008309_22

Specimen euxassay_008309_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Moderate Regionally restricted euxassay_008309_23
TS23: basioccipital bone Moderate Regionally restricted euxassay_008309_23
TS23: temporal bone petrous part Moderate Regionally restricted euxassay_008309_23
TS23: exoccipital bone Moderate Regionally restricted euxassay_008309_23
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_008309_23
TS23: humerus Weak Regionally restricted euxassay_008309_23

Specimen euxassay_008309_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Moderate Regionally restricted euxassay_008309_24
TS23: basisphenoid bone Moderate Regionally restricted euxassay_008309_24
TS23: temporal bone petrous part Moderate Regionally restricted euxassay_008309_24
TS23: exoccipital bone Moderate Regionally restricted euxassay_008309_24
TS23: basioccipital bone Moderate Regionally restricted euxassay_008309_24


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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/12/2024
MGI 6.23
The Jackson Laboratory