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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4824908
Gene symbol: Foxj1
Gene name: forkhead box J1
Modification date: 09/14/2010
Probe: T55056
Probe preparation: Antisense RNA labelled with digoxigenin
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_019653_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_019653_02

Specimen euxassay_019653_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_019653_03

Specimen euxassay_019653_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_019653_04

Specimen euxassay_019653_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_019653_05
TS23: lateral ventricle choroid plexus Strong Regionally restricted euxassay_019653_05

Specimen euxassay_019653_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_019653_06
TS23: lateral ventricle choroid plexus Strong Regionally restricted euxassay_019653_06

Specimen euxassay_019653_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_019653_07
TS23: lateral ventricle choroid plexus Strong Regionally restricted euxassay_019653_07

Specimen euxassay_019653_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Moderate Regionally restricted euxassay_019653_08
TS23: lateral ventricle choroid plexus Moderate Regionally restricted euxassay_019653_08

Specimen euxassay_019653_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Moderate Regionally restricted euxassay_019653_09
TS23: lateral ventricle choroid plexus Moderate Regionally restricted euxassay_019653_09

Specimen euxassay_019653_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_019653_10
TS23: lateral ventricle choroid plexus Strong Regionally restricted euxassay_019653_10
TS23: olfactory epithelium Strong Regionally restricted euxassay_019653_10

Specimen euxassay_019653_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_019653_11
TS23: lateral ventricle choroid plexus Strong Regionally restricted euxassay_019653_11
TS23: olfactory epithelium Strong Regionally restricted euxassay_019653_11
TS23: midbrain floor plate Moderate Regionally restricted euxassay_019653_11

Specimen euxassay_019653_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lateral ventricle choroid plexus Moderate Regionally restricted euxassay_019653_12
TS23: olfactory epithelium Strong Regionally restricted euxassay_019653_12
TS23: midbrain floor plate Weak Regionally restricted euxassay_019653_12
TS23: diencephalon floor plate Weak Regionally restricted euxassay_019653_12

Specimen euxassay_019653_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_019653_13
TS23: lateral ventricle choroid plexus Strong Regionally restricted euxassay_019653_13
TS23: olfactory epithelium Strong Regionally restricted euxassay_019653_13
TS23: spinal cord floor plate Moderate Regionally restricted euxassay_019653_13

Specimen euxassay_019653_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_019653_14
TS23: lateral ventricle choroid plexus Strong Regionally restricted euxassay_019653_14
TS23: olfactory epithelium Strong Regionally restricted euxassay_019653_14
TS23: spinal cord floor plate Moderate Regionally restricted euxassay_019653_14

Specimen euxassay_019653_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Moderate Regionally restricted euxassay_019653_15
TS23: lateral ventricle choroid plexus Moderate Regionally restricted euxassay_019653_15
TS23: olfactory epithelium Strong Regionally restricted euxassay_019653_15
TS23: spinal cord floor plate Weak Regionally restricted euxassay_019653_15

Specimen euxassay_019653_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Moderate Regionally restricted euxassay_019653_16
TS23: lateral ventricle choroid plexus Moderate Regionally restricted euxassay_019653_16

Specimen euxassay_019653_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_019653_17
TS23: lateral ventricle choroid plexus Strong Regionally restricted euxassay_019653_17
TS23: olfactory epithelium Strong Regionally restricted euxassay_019653_17

Specimen euxassay_019653_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_019653_18
TS23: lateral ventricle choroid plexus Strong Regionally restricted euxassay_019653_18
TS23: olfactory epithelium Strong Regionally restricted euxassay_019653_18

Specimen euxassay_019653_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_019653_19
TS23: lateral ventricle choroid plexus Strong Regionally restricted euxassay_019653_19
TS23: olfactory epithelium Strong Regionally restricted euxassay_019653_19

Specimen euxassay_019653_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Moderate Regionally restricted euxassay_019653_20
TS23: lateral ventricle choroid plexus Moderate Regionally restricted euxassay_019653_20
TS23: olfactory epithelium Strong Regionally restricted euxassay_019653_20

Specimen euxassay_019653_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_019653_21
TS23: olfactory epithelium Strong Regionally restricted euxassay_019653_21


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
11/13/2018
MGI 6.13
The Jackson Laboratory