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Gene Expression Data
Assay Details
Assay
Reference: J:101679 Deltagen Inc, NIH initiative supporting placement of Deltagen, Inc. mice into public repositories. MGI Direct Data Submission. 2005;
Assay type: In situ reporter (knock in)
MGI Accession ID: MGI:3639255
Gene symbol: Sema6c
Gene name: sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C
Modification date: 11/24/2014
Reporter: lacZ
Direct Detection
Results
Specimen Mouse 291752 - Image 99206669: postnatal day 49; Sema6ctm1Dgen/Sema6c+ (more )
Structure Level Pattern Image Note
TS28: brain Very strong 99206669 Expression is present in practically all cells of the brain.

Specimen Mouse 291752 - Image 99206670: postnatal day 49; Sema6ctm1Dgen/Sema6c+ (more )
Structure Level Pattern Image Note
TS28: cerebellum Very strong 99206670 Expression is present in practically all cells of the cerebellum.

Specimen Mouse 291752 - Image 99206672: postnatal day 49; Sema6ctm1Dgen/Sema6c+ (more )
Structure Level Pattern Image Note
TS28: brainstem Very strong 99206672 Expression is present in practically all cells of the brainstem.

Specimen Mouse 291752 - Image 99236662: postnatal day 49; Sema6ctm1Dgen/Sema6c+ (more )
Structure Level Pattern Image Note
TS28: telencephalon Very strong 99236662 Expression is present in practically all cells of the cerebrum.

Specimen Mouse 291752 - Image 99237100: postnatal day 49; Sema6ctm1Dgen/Sema6c+ (more )
Structure Level Pattern Image Note
TS28: cervix uteri Weak Regionally restricted 99237100 There is scattered expression in the stroma.

Specimen Mouse 291752 - Image 99237102: postnatal day 49; Sema6ctm1Dgen/Sema6c+ (more )
Structure Level Pattern Image Note
TS28: cervix uteri Weak Regionally restricted 99237102 There is scattered expression in the smooth muscle layer.

Specimen Mouse 291752 - Image 99237104: postnatal day 49; Sema6ctm1Dgen/Sema6c+ (more )
Structure Level Pattern Image Note
TS28: myometrium Moderate 99237104 Expression is frequently seen in the myometrium.

Specimen Mouse 291752 - Image 99237105: postnatal day 49; Sema6ctm1Dgen/Sema6c+ (more )
Structure Level Pattern Image Note
TS28: uterus Strong Regionally restricted 99237105 Expression is frequently seen in the blood vessels of the uterus.
TS28: blood vessel Strong Regionally restricted 99237105 Expression is frequently seen in the blood vessels of the uterus.

Specimen Mouse 291752 - Image 99237107: postnatal day 49; Sema6ctm1Dgen/Sema6c+ (more )
Structure Level Pattern Image Note
TS28: endometrium stroma Weak 99237107 There is scattered expression in the endometrial stroma.

Specimen Mouse 291752 - Image 99237108: postnatal day 49; Sema6ctm1Dgen/Sema6c+ (more )
Structure Level Pattern Image Note
TS28: cervix uteri Weak Regionally restricted 99237108 There is scattered expression in the blood vessels of the cervix.
TS28: blood vessel Weak Regionally restricted 99237108 There is scattered expression in the blood vessels of the cervix.

Specimen Mouse 291752 - Image 99237113: postnatal day 49; Sema6ctm1Dgen/Sema6c+ (more )
Structure Level Pattern Image Note
TS28: ovary Trace Regionally restricted 99237113 There is scattered expression in the blood vessels of the ovary.
TS28: blood vessel Trace Regionally restricted 99237113 There is scattered expression in the blood vessels of the ovary.

Specimen Mouse 291752 - Image 99237118: postnatal day 49; Sema6ctm1Dgen/Sema6c+ (more )
Structure Level Pattern Image Note
TS28: ovary Trace Regionally restricted 99237118 There is occasional staining in the stroma.

Specimen Mouse 291752: postnatal day 49; Sema6ctm1Dgen/Sema6c+ (more )
Structure Level Pattern Image Note
TS28: bone marrow Absent

Specimen Mouse 296235 - Image 99232070: postnatal day 58; Sema6ctm1Dgen/Sema6c+ (more )
Structure Level Pattern Image Note
TS28: cerebral cortex Strong 99232070 Expression is frequently seen in the cortex.

Specimen Mouse 296235 - Image 99232071: postnatal day 58; Sema6ctm1Dgen/Sema6c+ (more )
Structure Level Pattern Image Note
TS28: amygdala Strong 99232071 There is scattered expression in the amygdala.

Specimen Mouse 296235 - Image 99232072: postnatal day 58; Sema6ctm1Dgen/Sema6c+ (more )
Structure Level Pattern Image Note
TS28: caudate-putamen Strong 99232072 There is scattered expression in the caudate-putamen.

Specimen Mouse 296235 - Image 99232076: postnatal day 58; Sema6ctm1Dgen/Sema6c+ (more )
Structure Level Pattern Image Note
TS28: hippocampus Very strong 99232076 Expression is frequently seen in the hippocampus.

Specimen Mouse 296235 - Image 99232077: postnatal day 58; Sema6ctm1Dgen/Sema6c+ (more )
Structure Level Pattern Image Note
TS28: thalamus Strong 99232077 Expression is frequently seen in the thalamus.

Specimen Mouse 296235 - Image 99232078: postnatal day 58; Sema6ctm1Dgen/Sema6c+ (more )
Structure Level Pattern Image Note
TS28: hypothalamus Strong 99232078 Expression is frequently seen in the hypothalamus.

Specimen Mouse 296235 - Image 99232345: postnatal day 58; Sema6ctm1Dgen/Sema6c+ (more )
Structure Level Pattern Image Note
TS28: testis Weak Regionally restricted 99232345 Expression is frequently seen in the tunica albuginea.

Specimen Mouse 296235 - Image 99232346: postnatal day 58; Sema6ctm1Dgen/Sema6c+ (more )
Structure Level Pattern Image Note
TS28: lamina propria of bladder Moderate 99232346 There is scattered expression in the muscularis.

Specimen Mouse 296235 - Image 99232347: postnatal day 58; Sema6ctm1Dgen/Sema6c+ (more )
Structure Level Pattern Image Note
TS28: bladder Weak Regionally restricted 99232347 Expression is frequently seen in the blood vessels of the urinary bladder.
TS28: blood vessel Weak Regionally restricted 99232347 Expression is frequently seen in the blood vessels of the urinary bladder.

Specimen Mouse 296235 - Image 99232348: postnatal day 58; Sema6ctm1Dgen/Sema6c+ (more )
Structure Level Pattern Image Note
TS28: glomerular tuft Moderate 99232348 There is occasional staining in the glomeruli.

Specimen Mouse 296235 - Image 99232349: postnatal day 58; Sema6ctm1Dgen/Sema6c+ (more )
Structure Level Pattern Image Note
TS28: renal medulla Trace 99232349 There is scattered expression in the medulla.

Specimen Mouse 296235 - Image 99232351: postnatal day 58; Sema6ctm1Dgen/Sema6c+ (more )
Structure Level Pattern Image Note
TS28: adrenal gland Weak Regionally restricted 99232351 Expression is frequently seen in the capsule.

Specimen Mouse 296235 - Image 99232353: postnatal day 58; Sema6ctm1Dgen/Sema6c+ (more )
Structure Level Pattern Image Note
TS28: renal papilla Weak 99232353 Expression is frequently seen in the papilla.

Specimen Mouse 296235 - Image 99232354: postnatal day 58; Sema6ctm1Dgen/Sema6c+ (more )
Structure Level Pattern Image Note
TS28: heart atrium Very strong 99232354 Expression is present in practically all cells of the atrium.

Specimen Mouse 296235 - Image 99232355: postnatal day 58; Sema6ctm1Dgen/Sema6c+ (more )
Structure Level Pattern Image Note
TS28: heart valve Weak 99232355 Expression is frequently seen in the valves.

Specimen Mouse 296235 - Image 99232356: postnatal day 58; Sema6ctm1Dgen/Sema6c+ (more )
Structure Level Pattern Image Note
TS28: heart ventricle Moderate 99232356 There is scattered expression in the ventricles.

Specimen Mouse 296235 - Image 99232357: postnatal day 58; Sema6ctm1Dgen/Sema6c+ (more )
Structure Level Pattern Image Note
TS28: heart Weak Regionally restricted 99232357 Expression is frequently seen in the blood vessels of the heart.
TS28: blood vessel Weak Regionally restricted 99232357 Expression is frequently seen in the blood vessels of the heart.

Specimen Mouse 296235 - Image 99232358: postnatal day 58; Sema6ctm1Dgen/Sema6c+ (more )
Structure Level Pattern Image Note
TS28: lung Very strong Regionally restricted 99232358 Expression is frequently seen in the blood vessels of the lung.
TS28: blood vessel Very strong Regionally restricted 99232358 Expression is frequently seen in the blood vessels of the lung.

Specimen Mouse 296235 - Image 99232359: postnatal day 58; Sema6ctm1Dgen/Sema6c+ (more )
Structure Level Pattern Image Note
TS28: bronchiole Strong Regionally restricted 99232359 There is scattered expression in the smooth muscle cells of the bronchioles.

Specimen Mouse 296235 - Image 99232360: postnatal day 58; Sema6ctm1Dgen/Sema6c+ (more )
Structure Level Pattern Image Note
TS28: bile duct Strong 99232360 There is scattered expression in the bile duct.

Specimen Mouse 296235 - Image 99232361: postnatal day 58; Sema6ctm1Dgen/Sema6c+ (more )
Structure Level Pattern Image Note
TS28: liver Strong Regionally restricted 99232361 There is scattered expression in the blood vessels of the liver.
TS28: blood vessel Strong Regionally restricted 99232361 There is scattered expression in the blood vessels of the liver.

Specimen Mouse 296235 - Image 99232364: postnatal day 58; Sema6ctm1Dgen/Sema6c+ (more )
Structure Level Pattern Image Note
TS28: aorta Weak 99232364 Expression is frequently seen in the aorta.

Specimen Mouse 296235 - Image 99232370: postnatal day 58; Sema6ctm1Dgen/Sema6c+ (more )
Structure Level Pattern Image Note
TS28: retina Moderate 99232370 There is scattered expression in the retina.

Specimen Mouse 296235 - Image 99232371: postnatal day 58; Sema6ctm1Dgen/Sema6c+ (more )
Structure Level Pattern Image Note
TS28: sclera Moderate 99232371 Expression is frequently seen in the sclera.

Specimen Mouse 296235 - Image 99232372: postnatal day 58; Sema6ctm1Dgen/Sema6c+ (more )
Structure Level Pattern Image Note
TS28: sciatic nerve Very strong 99232372 Expression is present in practically all cells of the sciatic nerve.

Specimen Mouse 296235 - Image 99242410: postnatal day 58; Sema6ctm1Dgen/Sema6c+ (more )
Structure Level Pattern Image Note
TS28: skeletal muscle Strong 99242410 There is scattered expression in the skeletal muscle.

Specimen Mouse 296235 - Image 99242416: postnatal day 58; Sema6ctm1Dgen/Sema6c+ (more )
Structure Level Pattern Image Note
TS28: dermis Strong 99242416 There is scattered expression in the dermis.

Specimen Mouse 296235 - Image 99242418: postnatal day 58; Sema6ctm1Dgen/Sema6c+ (more )
Structure Level Pattern Image Note
TS28: thyroid gland Weak Regionally restricted 99242418 There is scattered expression in the blood vessels of the thyroid gland.
TS28: blood vessel Weak Regionally restricted 99242418 There is scattered expression in the blood vessels of the thyroid gland.

Specimen Mouse 296235 - Image 99242420: postnatal day 58; Sema6ctm1Dgen/Sema6c+ (more )
Structure Level Pattern Image Note
TS28: trachea cartilage Moderate 99242420 There is scattered expression in the chondrocytes.

Specimen Mouse 296235 - Image 99242424: postnatal day 58; Sema6ctm1Dgen/Sema6c+ (more )
Structure Level Pattern Image Note
TS28: trachea Strong 99242424 There is scattered expression in the trachea.

Specimen Mouse 296235 - Image 99242431: postnatal day 58; Sema6ctm1Dgen/Sema6c+ (more )
Structure Level Pattern Image Note
TS28: ciliary body Weak 99242431 There is scattered expression in the ciliary body.

Specimen Mouse 296235 - Image 99242436: postnatal day 58; Sema6ctm1Dgen/Sema6c+ (more )
Structure Level Pattern Image Note
TS28: retina outer nuclear layer Weak 99242436 There is occasional staining in the outer nuclear layer.

Specimen Mouse 296235 - Image 99242441: postnatal day 58; Sema6ctm1Dgen/Sema6c+ (more )
Structure Level Pattern Image Note
TS28: retina inner nuclear layer Strong 99242441 There is scattered expression in the inner nuclear layer.

Specimen Mouse 296235 - Image 99242443: postnatal day 58; Sema6ctm1Dgen/Sema6c+ (more )
Structure Level Pattern Image Note
TS28: retina ganglion cell layer Strong 99242443 Expression is frequently seen in the ganglion cell layer.

Specimen Mouse 296235 - Image 99242651: postnatal day 58; Sema6ctm1Dgen/Sema6c+ (more )
Structure Level Pattern Image Note
TS28: metanephros Weak Regionally restricted 99242651 Expression is frequently seen in the blood vessels of the kidney.
TS28: blood vessel Weak Regionally restricted 99242651 Expression is frequently seen in the blood vessels of the kidney.

Specimen Mouse 296235 - Image 99242656: postnatal day 58; Sema6ctm1Dgen/Sema6c+ (more )
Structure Level Pattern Image Note
TS28: prostate gland Weak Regionally restricted 99242656 There is scattered expression in the stroma.

Specimen Mouse 296235 - Image 99242660: postnatal day 58; Sema6ctm1Dgen/Sema6c+ (more )
Structure Level Pattern Image Note
TS28: testis Moderate Regionally restricted 99242660 Expression is frequently seen in the blood vessels of the testis.
TS28: blood vessel Moderate Regionally restricted 99242660 Expression is frequently seen in the blood vessels of the testis.

Specimen Mouse 296235 - Image 99242662: postnatal day 58; Sema6ctm1Dgen/Sema6c+ (more )
Structure Level Pattern Image Note
TS28: seminiferous tubule Very strong 99242662 There is scattered expression in the seminiferous tubules.

Specimen Mouse 296235 - Image 99242663: postnatal day 58; Sema6ctm1Dgen/Sema6c+ (more )
Structure Level Pattern Image Note
TS28: pancreatic duct Weak 99242663 There is scattered expression in the duct.

Specimen Mouse 296235 - Image 99242664: postnatal day 58; Sema6ctm1Dgen/Sema6c+ (more )
Structure Level Pattern Image Note
TS28: pancreas Strong Regionally restricted 99242664 Expression is frequently seen in the blood vessels of the pancreas.
TS28: blood vessel Strong Regionally restricted 99242664 Expression is frequently seen in the blood vessels of the pancreas.

Specimen Mouse 296235 - Image 99242668: postnatal day 58; Sema6ctm1Dgen/Sema6c+ (more )
Structure Level Pattern Image Note
TS28: spleen trabeculum Trace 99242668 There is occasional staining in the trabeculae.

Specimen Mouse 296235 - Image 99242670: postnatal day 58; Sema6ctm1Dgen/Sema6c+ (more )
Structure Level Pattern Image Note
TS28: spleen capsule Weak 99242670 There is occasional staining in the capsule.

Specimen Mouse 296235 - Image 99242671: postnatal day 58; Sema6ctm1Dgen/Sema6c+ (more )
Structure Level Pattern Image Note
TS28: adenohypophysis pars intermedia Weak 99242671 Expression is frequently seen in the pars intermedia.

Specimen Mouse 296235 - Image 99242672: postnatal day 58; Sema6ctm1Dgen/Sema6c+ (more )
Structure Level Pattern Image Note
TS28: neurohypophysis pars nervosa Moderate 99242672 There is occasional staining in the pars nervosa.

Specimen Mouse 296235 - Image 99242673: postnatal day 58; Sema6ctm1Dgen/Sema6c+ (more )
Structure Level Pattern Image Note
TS28: adenohypophysis pars anterior Moderate 99242673 Expression is frequently seen in the pars distalis.

Specimen Mouse 296235 - Image 99242674: postnatal day 58; Sema6ctm1Dgen/Sema6c+ (more )
Structure Level Pattern Image Note
TS28: spinal cord white matter Moderate 99242674 There is occasional staining in the white matter.

Specimen Mouse 296235 - Image 99242676: postnatal day 58; Sema6ctm1Dgen/Sema6c+ (more )
Structure Level Pattern Image Note
TS28: spinal cord ventral horn Strong 99242676 Expression is frequently seen in the ventral horns.

Specimen Mouse 296235 - Image 99242677: postnatal day 58; Sema6ctm1Dgen/Sema6c+ (more )
Structure Level Pattern Image Note
TS28: spinal cord Very strong Regionally restricted 99242677 Expression is present in practically all the nerves of the spinal cord.
TS28: nerve Very strong Regionally restricted 99242677 Expression is present in practically all the nerves of the spinal cord.

Specimen Mouse 296235 - Image 99242679: postnatal day 58; Sema6ctm1Dgen/Sema6c+ (more )
Structure Level Pattern Image Note
TS28: spinal cord dorsal horn Strong 99242679 Expression is frequently seen in the dorsal horns.

Specimen Mouse 296235 - Image 99242681: postnatal day 58; Sema6ctm1Dgen/Sema6c+ (more )
Structure Level Pattern Image Note
TS28: brainstem Very strong 99242681 Expression is frequently seen in the brainstem.

Specimen Mouse 296235 - Image 99242682: postnatal day 58; Sema6ctm1Dgen/Sema6c+ (more )
Structure Level Pattern Image Note
TS28: cerebellum molecular layer Strong 99242682 Expression is present in practically all cells of the molecular layer.

Specimen Mouse 296235 - Image 99242683: postnatal day 58; Sema6ctm1Dgen/Sema6c+ (more )
Structure Level Pattern Image Note
TS28: cerebellum Weak Regionally restricted 99242683 There is scattered expression in the blood vessels of the cerebellum.
TS28: blood vessel Weak Regionally restricted 99242683 There is scattered expression in the blood vessels of the cerebellum.

Specimen Mouse 296235 - Image 99242684: postnatal day 58; Sema6ctm1Dgen/Sema6c+ (more )
Structure Level Pattern Image Note
TS28: cerebellum granule cell layer Strong 99242684 Expression is present in practically all cells of the granular layer.

Specimen Mouse 296235 - Image 99242685: postnatal day 58; Sema6ctm1Dgen/Sema6c+ (more )
Structure Level Pattern Image Note
TS28: cerebellum Purkinje cell layer Very strong 99242685 Expression is present in practically all cells of the Purkinje layer.

Specimen Mouse 296235 - Image 99242686: postnatal day 58; Sema6ctm1Dgen/Sema6c+ (more )
Structure Level Pattern Image Note
TS28: cerebellum white matter Strong 99242686 There is occasional staining in the white matter.

Specimen Mouse 296235 - Image 99242710: postnatal day 58; Sema6ctm1Dgen/Sema6c+ (more )
Structure Level Pattern Image Note
TS28: telencephalon Strong 99242710 There is scattered expression in the cerebrum.

Specimen Mouse 296235: postnatal day 58; Sema6ctm1Dgen/Sema6c+ (more )
Structure Level Pattern Image Note
TS28: adrenal gland Weak Regionally restricted There is scattered expression in the blood vessels of the adrenal gland.
TS28: blood vessel Present Regionally restricted In blood vessels moderate expression is frequently seen in the cerebrum; moderate, scattered expression in the spinal cord; weak, scattered expression in the adrenal and prostate glands; and weak, occasional staining in the spleen.
TS28: bone marrow Absent
TS28: spleen Weak Regionally restricted There is occasional staining in the blood vessels of the spleen.
TS28: lymph node Absent
TS28: thymus Absent
TS28: prostate gland Weak Regionally restricted There is scattered expression in the blood vessels of the prostate gland.
TS28: telencephalon Moderate Regionally restricted Expression is frequently seen in the blood vessels of the cerebrum.
TS28: spinal cord Moderate Regionally restricted There is scattered expression in the blood vessels of the spinal cord.


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last database update
11/14/2017
MGI 6.11
The Jackson Laboratory