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Phenotypes associated with this allele
Allele Symbol
Allele Name
Allele ID
Chd7tm1.1Dmm
targeted mutation 1.1, Donna M Martin
MGI:4835266
Summary 15 genotypes
Jump to Allelic Composition Genetic Background Genotype ID
ht1
Chd7Gt(S20-7E1)Sor/Chd7tm1.1Dmm involves: 129 * C57BL/6 * Swiss Webster MGI:4835274
cn2
Chd7tm1.1Dmm/Chd7tm1.1Dmm
Gt(ROSA)26Sortm6(CAG-ZsGreen1)Hze/Gt(ROSA)26Sor+
Tg(Atoh1-cre)1Bfri/0
involves: 129 * C57BL/6 * C57BL/6NCrl * CBA MGI:7518647
cn3
Chd7Gt(S20-7E1)Sor/Chd7tm1.1Dmm
Foxg1tm1(cre)Skm/Foxg1+
involves: 129 * C57BL/6 * Swiss Webster MGI:4835272
cn4
Chd7tm1.1Dmm/Chd7+
Foxg1tm1(cre)Skm/Foxg1+
involves: 129 * C57BL/6 * Swiss Webster MGI:4835273
cn5
Chd7tm1.1Dmm/Chd7tm1.1Dmm
Foxg1tm1(cre)Skm/Foxg1+
involves: 129P2/OlaHsd * 129S6/SvEvTac MGI:5807348
cn6
Chd7tm1.1Dmm/Chd7tm1.1Dmm
Tg(Pax2-cre)1Akg/0
involves: 129S1/SvImJ * 129S6/SvEvTac * C57BL/6 MGI:7518606
cn7
Chd7tm1.1Dmm/Chd7tm1.1Dmm
Gt(ROSA)26Sortm6(CAG-ZsGreen1)Hze/Gt(ROSA)26Sor+
Shhtm1(EGFP/cre)Cjt/Shh+
involves: 129S1/SvlmJ * 129S6/SvEvTac * C57BL/6J * SJL/J MGI:7518701
cn8
Chd7tm1.1Dmm/Chd7tm1.1Dmm
Olig1tm1(cre)Rth/Olig1+
involves: 129S4/SvJae * 129S6/SvEvTac * C57BL/6 MGI:6117077
cn9
Chd7tm1.1Dmm/Chd7tm1.1Dmm
Tg(rx3-icre)1Mjam/0
involves: 129S6/SvEvTac MGI:5774845
cn10
Chd7tm1.1Dmm/Chd7+
Tg(rx3-icre)1Mjam/0
involves: 129S6/SvEvTac MGI:5774943
cn11
Chd7tm1.1Dmm/Chd7tm1.1Dmm
Tg(Pdgfra-cre/ERT)467Dbe/0
involves: 129S6/SvEvTac * C57BL/6 * SJL MGI:7494131
cn12
Chd7tm1.1Dmm/Chd7tm1.1Dmm
Tg(Pax6-cre,GFP)1Pgr/0
involves: 129S6/SvEvTac * FVB MGI:5807349
cn13
Chd7Gt(S20-7E1)Sor/Chd7tm1.1Dmm
Tg(T-cre)1Lwd/0
involves: 129S * C3H * C57BL/6 MGI:7518601
cn14
Chd7Gt(S20-7E1)Sor/Chd7tm1.1Dmm
Tg(Pax2-cre)1Akg/0
involves: 129S * C57BL/6 MGI:7518554
cn15
Chd7Gt(S20-7E1)Sor/Chd7tm1.1Dmm
Gt(ROSA)26Sortm6(CAG-ZsGreen1)Hze/Gt(ROSA)26Sor+
Tg(Neurog1-cre)1Jejo/0
involves: 129S * C57BL/6 * SJL/J MGI:7518675


Genotype
MGI:4835274
ht1
Allelic
Composition
Chd7Gt(S20-7E1)Sor/Chd7tm1.1Dmm
Genetic
Background
involves: 129 * C57BL/6 * Swiss Webster
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Chd7Gt(S20-7E1)Sor mutation (1 available); any Chd7 mutation (136 available)
Chd7tm1.1Dmm mutation (1 available); any Chd7 mutation (136 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
hearing/vestibular/ear
• truncated or hypoplastic




Genotype
MGI:7518647
cn2
Allelic
Composition
Chd7tm1.1Dmm/Chd7tm1.1Dmm
Gt(ROSA)26Sortm6(CAG-ZsGreen1)Hze/Gt(ROSA)26Sor+
Tg(Atoh1-cre)1Bfri/0
Genetic
Background
involves: 129 * C57BL/6 * C57BL/6NCrl * CBA
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Chd7tm1.1Dmm mutation (1 available); any Chd7 mutation (136 available)
Gt(ROSA)26Sortm6(CAG-ZsGreen1)Hze mutation (1 available); any Gt(ROSA)26Sor mutation (942 available)
Tg(Atoh1-cre)1Bfri mutation (1 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
hearing/vestibular/ear
N
• hair cells are preserved in the apical, mid, and basal cochlear regions




Genotype
MGI:4835272
cn3
Allelic
Composition
Chd7Gt(S20-7E1)Sor/Chd7tm1.1Dmm
Foxg1tm1(cre)Skm/Foxg1+
Genetic
Background
involves: 129 * C57BL/6 * Swiss Webster
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Chd7Gt(S20-7E1)Sor mutation (1 available); any Chd7 mutation (136 available)
Chd7tm1.1Dmm mutation (1 available); any Chd7 mutation (136 available)
Foxg1tm1(cre)Skm mutation (2 available); any Foxg1 mutation (28 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
mortality/aging
• die within 1 day of birth with no obvious milk in the stomach

hearing/vestibular/ear
• reductions in cellular proliferation at E10.5 in both the otic epithelium and the vestibulocochlear ganglion
• severe defects in cochlear structures
• severely hypoplastic
• undulating appearance in the middle turn of the cochlea
• supernumerary rows of outer hair cells in the apical cochlea at P1
• occasional extra rows of outer hair cells n the middle turn
• basal turn also shows supernumerary hair cells
• undercoiled with abnormal twisting at the apex
• severe defects in vestibular structures
• hypoplastic

nervous system
• reductions in cellular proliferation at E10.5 in both the otic epithelium and the vestibulocochlear ganglion
• supernumerary rows of outer hair cells in the apical cochlea at P1
• occasional extra rows of outer hair cells n the middle turn
• basal turn also shows supernumerary hair cells
• about 1.5 fold smaller at E10.5-E12.5 compared to heterozygous and wild-type controls (J:164582)
• reduction in cellular proliferation at E10.5 in the vestibulocochlear ganglion (J:164582)
• neurites extending away from the hair cells show abnormal looping in the apex at P1 (J:310063)
• abnormal neuritic projections in the middle turn (J:310063)
• disorganized and misrouted neurites in the basal turn (J:310063)
• severe reduction in the number of neuroblasts in the otic epithelium and vestibulocochlear ganglion at E9.5, E10.5 and E11.5

craniofacial
• at E12.5

vision/eye
• medially displaced eyes at E12.5

behavior/neurological
• die within 1 day of birth with no obvious milk in the stomach

cellular
• reductions in cellular proliferation at E10.5 in both the otic epithelium and the vestibulocochlear ganglion

growth/size/body
• at E12.5




Genotype
MGI:4835273
cn4
Allelic
Composition
Chd7tm1.1Dmm/Chd7+
Foxg1tm1(cre)Skm/Foxg1+
Genetic
Background
involves: 129 * C57BL/6 * Swiss Webster
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Chd7tm1.1Dmm mutation (1 available); any Chd7 mutation (136 available)
Foxg1tm1(cre)Skm mutation (2 available); any Foxg1 mutation (28 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
hearing/vestibular/ear
• decrease in the number of proliferating cells in the otic epithelium at E10.5
• truncated or hypoplastic

nervous system
• decrease in the number of proliferating cells at E9.5 but not at E10.5




Genotype
MGI:5807348
cn5
Allelic
Composition
Chd7tm1.1Dmm/Chd7tm1.1Dmm
Foxg1tm1(cre)Skm/Foxg1+
Genetic
Background
involves: 129P2/OlaHsd * 129S6/SvEvTac
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Chd7tm1.1Dmm mutation (1 available); any Chd7 mutation (136 available)
Foxg1tm1(cre)Skm mutation (2 available); any Foxg1 mutation (28 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
vision/eye
• optic vesicle is present and appears normal at E9.5, however no progression toward formation of optic cup or lens structures is seen even as late as E12.5
• optic vesicle is present and appears normal at E9.5, however no progression toward formation of optic cup or lens structures is seen even as late as E12.5




Genotype
MGI:7518606
cn6
Allelic
Composition
Chd7tm1.1Dmm/Chd7tm1.1Dmm
Tg(Pax2-cre)1Akg/0
Genetic
Background
involves: 129S1/SvImJ * 129S6/SvEvTac * C57BL/6
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Chd7tm1.1Dmm mutation (1 available); any Chd7 mutation (136 available)
Tg(Pax2-cre)1Akg mutation (2 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
hearing/vestibular/ear
• 57% shorter compared to controls
• region specific defects in innervation and patterning of the sensory epithelium
• in the middle region there is a narrowing of the epithelium with missing outer hair cells and a bifurcation of the direction of neuritic projections, with most neurites projecting towards the apex rather than the base
• severity of the phenotype in the middle region varies widely in severity
• some show undulating epithelium
• abundant supernumerary hair cells in the apex
• less frequent supernumerary hair cells in the middle section
• rarely see supernumerary hair cells in the base

nervous system
• abundant supernumerary hair cells in the apex
• less frequent supernumerary hair cells in the middle section
• rarely see supernumerary hair cells in the base
• disorganized spiral ganglion neurite projections in the apex of the cochlea




Genotype
MGI:7518701
cn7
Allelic
Composition
Chd7tm1.1Dmm/Chd7tm1.1Dmm
Gt(ROSA)26Sortm6(CAG-ZsGreen1)Hze/Gt(ROSA)26Sor+
Shhtm1(EGFP/cre)Cjt/Shh+
Genetic
Background
involves: 129S1/SvlmJ * 129S6/SvEvTac * C57BL/6J * SJL/J
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Chd7tm1.1Dmm mutation (1 available); any Chd7 mutation (136 available)
Gt(ROSA)26Sortm6(CAG-ZsGreen1)Hze mutation (1 available); any Gt(ROSA)26Sor mutation (942 available)
Shhtm1(EGFP/cre)Cjt mutation (1 available); any Shh mutation (45 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
hearing/vestibular/ear
N
• normal hair cells and neurites at P1 in the cochlea




Genotype
MGI:6117077
cn8
Allelic
Composition
Chd7tm1.1Dmm/Chd7tm1.1Dmm
Olig1tm1(cre)Rth/Olig1+
Genetic
Background
involves: 129S4/SvJae * 129S6/SvEvTac * C57BL/6
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Chd7tm1.1Dmm mutation (1 available); any Chd7 mutation (136 available)
Olig1tm1(cre)Rth mutation (1 available); any Olig1 mutation (13 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
nervous system
• decrease in the number of MBP+ oligodendrocytes in the spinal cord
• decrease in the number of CC1+ oligodendrocytes and oligodendrocyte lineage cells in the cortices
• number of CC1+ oligodendrocytes increases with age, eventually reaching control levels in the spinal cord
• at P28 in the optic nerve
• decrease in the number of myelinated axons at P14 in the optic nerve
• degree of hypomyelination decreases with age with no difference detected in the spinal cord at P60




Genotype
MGI:5774845
cn9
Allelic
Composition
Chd7tm1.1Dmm/Chd7tm1.1Dmm
Tg(rx3-icre)1Mjam/0
Genetic
Background
involves: 129S6/SvEvTac
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Chd7tm1.1Dmm mutation (1 available); any Chd7 mutation (136 available)
Tg(rx3-icre)1Mjam mutation (0 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
vision/eye
• lens structures are either very small or not apparent
• eye morphogenesis is severely disrupted at E12.5
• phenotypes range from highly dysmorphic optic cups in moderately affected eyes to complete absence of discernable optic cup structures in severely affected eyes
• severely affected eyes show complete absence of discernable optic cup structures
• mice show full-depth colobomas at E12.5 with complete penetrance

Mouse Models of Human Disease
DO ID OMIM ID(s) Ref(s)
CHARGE syndrome DOID:0050834 OMIM:214800
J:231044




Genotype
MGI:5774943
cn10
Allelic
Composition
Chd7tm1.1Dmm/Chd7+
Tg(rx3-icre)1Mjam/0
Genetic
Background
involves: 129S6/SvEvTac
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Chd7tm1.1Dmm mutation (1 available); any Chd7 mutation (136 available)
Tg(rx3-icre)1Mjam mutation (0 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
vision/eye
• mice show full-depth colobomas at E12.5 with complete penetrance

Mouse Models of Human Disease
DO ID OMIM ID(s) Ref(s)
CHARGE syndrome DOID:0050834 OMIM:214800
J:231044




Genotype
MGI:7494131
cn11
Allelic
Composition
Chd7tm1.1Dmm/Chd7tm1.1Dmm
Tg(Pdgfra-cre/ERT)467Dbe/0
Genetic
Background
involves: 129S6/SvEvTac * C57BL/6 * SJL
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Chd7tm1.1Dmm mutation (1 available); any Chd7 mutation (136 available)
Tg(Pdgfra-cre/ERT)467Dbe mutation (1 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
nervous system
• decrease in the number of oligodendrocyte precursor cells in the corpus callosum and cortex at P7
• however, proliferation of oligodendrocyte precursor cells is similar to controls
• marked reduction in differentiating oligodendrocytes in cortical regions at 11 days after induction of cre expression (J:234565)
• while the recruitment of oligodendrocyte precursors to sites of lysolecithin-induced demyelination is similar to controls, the number of oligodendrocyte lineage cells are substantially reduced at these sites resulting in reduced remyelination (J:234565)
• decrease in the number of immature oligodendrocytes and expression changes indicates impaired ability to begin differentiation (J:264451)
• apoptotic oligodendrocyte precursor cells are seen in P7 brains but are rarely seen in controls

cellular
• decrease in the number of oligodendrocyte precursor cells in the corpus callosum and cortex at P7
• however, proliferation of oligodendrocyte precursor cells is similar to controls
• apoptotic oligodendrocyte precursor cells are seen in P7 brains but are rarely seen in controls




Genotype
MGI:5807349
cn12
Allelic
Composition
Chd7tm1.1Dmm/Chd7tm1.1Dmm
Tg(Pax6-cre,GFP)1Pgr/0
Genetic
Background
involves: 129S6/SvEvTac * FVB
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Chd7tm1.1Dmm mutation (1 available); any Chd7 mutation (136 available)
Tg(Pax6-cre,GFP)1Pgr mutation (2 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
vision/eye
• lenses at E12.5 are smaller but appear normal
• however, mice show well-formed eye structures at E12.5, the presence of optic cup and stalk, and the emerging retinal and pigmented epithelial layers from the optic cup appear normal and mice do not exhibit coloboma




Genotype
MGI:7518601
cn13
Allelic
Composition
Chd7Gt(S20-7E1)Sor/Chd7tm1.1Dmm
Tg(T-cre)1Lwd/0
Genetic
Background
involves: 129S * C3H * C57BL/6
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Chd7Gt(S20-7E1)Sor mutation (1 available); any Chd7 mutation (136 available)
Chd7tm1.1Dmm mutation (1 available); any Chd7 mutation (136 available)
Tg(T-cre)1Lwd mutation (1 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
hearing/vestibular/ear
N
• normal vestibular and cochlear morphologies




Genotype
MGI:7518554
cn14
Allelic
Composition
Chd7Gt(S20-7E1)Sor/Chd7tm1.1Dmm
Tg(Pax2-cre)1Akg/0
Genetic
Background
involves: 129S * C57BL/6
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Chd7Gt(S20-7E1)Sor mutation (1 available); any Chd7 mutation (136 available)
Chd7tm1.1Dmm mutation (1 available); any Chd7 mutation (136 available)
Tg(Pax2-cre)1Akg mutation (2 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
hearing/vestibular/ear
• severely malformed and hypoplastic




Genotype
MGI:7518675
cn15
Allelic
Composition
Chd7Gt(S20-7E1)Sor/Chd7tm1.1Dmm
Gt(ROSA)26Sortm6(CAG-ZsGreen1)Hze/Gt(ROSA)26Sor+
Tg(Neurog1-cre)1Jejo/0
Genetic
Background
involves: 129S * C57BL/6 * SJL/J
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Chd7Gt(S20-7E1)Sor mutation (1 available); any Chd7 mutation (136 available)
Chd7tm1.1Dmm mutation (1 available); any Chd7 mutation (136 available)
Gt(ROSA)26Sortm6(CAG-ZsGreen1)Hze mutation (1 available); any Gt(ROSA)26Sor mutation (942 available)
Tg(Neurog1-cre)1Jejo mutation (1 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
nervous system
• in the apical region of the cochlea aberrant axonal projections that cross, loop, and extend beyond the epithelium are seen
• at P1 total area of the spiral ganglion is reduced





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last database update
04/09/2024
MGI 6.23
The Jackson Laboratory