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Alcp6C57BL/6J
QTL Variant Detail
Nomenclature
QTL variant: Alcp6C57BL/6J
Name: alcohol preference locus 6, female specific; C57BL/6J
MGI ID: MGI:2155058
QTL: Alcp6  Location: Chr2:180844614-180844766 bp  Genetic Position: Chr2, cM position of peak correlated region/allele: 103.43 cM
QTL Note: genome coordinates based on the marker associated with the peak LOD score
Variant
origin
Strain of Specimen:  C57BL/6J
Variant
description
Allele Type:    QTL
Inheritance:    Not Specified
Notes

Mapping and Phenotype information for this QTL, its variants and associated markers

J:52467

Alcohol consumption and preference in mice were analyzed as a QTL in Recombinant Inbreds(RI) AXB and BXA and progenitor inbreds C57BL/6J and A/J. In males QTLs were found on mouse Chromosomes 2, 5, 7, 10, 11 and 16, and in females QTLs were found on Chromosomes 2, 4, 5, 7, 11, 16, and 19. A QTL for alcohol preference in male AXB/BXA mice was associated with marker D2Mit74 with a LOD score of 3.5 and is designated as Alcp5. Alcp5 did not overlap with Alcp1 as published in J:33277 Melo JA, Nat Genet 1996 Jun;13(2):147-53. In addition A QTL for alcohol preference in female AXB/BXA mice was also associated with marker D2Mit74 with a LOD score of 2.15 and is designated as Alcp6.

References
Original:  J:52467 Gill K, et al., Alcohol preference in AXB/BXA recombinant inbred mice: gender differences and gender-specific quantitative trait loci. Mamm Genome. 1998 Dec;9(12):929-35
All:  1 reference(s)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
02/23/2021
MGI 6.16
The Jackson Laboratory