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Snord43 Gene Detail
Summary
  • Symbol
    Snord43
  • Name
    small nucleolar RNA, C/D box 43
  • Synonyms
    MBII-47, U43
Location &
Maps
more
  • Sequence Map
    Chr15:79967060-79967107 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 15, 37.85 cM
Strain
Comparison
more
  • SNPs within 2kb
    32 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3819534
 snoRNA gene Chr15:79967048-79967155 (-)
129S1/SvImJ MGP_129S1SvImJ_G0008196
 miRNA gene Chr15:80390920-80391027 (-)
A/J MGP_AJ_G0008186
 miRNA gene Chr15:77614835-77614942 (-)
AKR/J MGP_AKRJ_G0008167
 miRNA gene Chr15:79782963-79783070 (-)
BALB/cJ MGP_BALBcJ_G0008169
 miRNA gene Chr15:77619283-77619390 (-)
C3H/HeJ MGP_C3HHeJ_G0008111
 miRNA gene Chr15:79771224-79771331 (-)
C57BL/6NJ MGP_C57BL6NJ_G0008362
 miRNA gene Chr15:83556811-83556918 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0007440
 miRNA gene Chr15:74093994-74094098 (-)
CAST/EiJ MGP_CASTEiJ_G0007986
 miRNA gene Chr15:80488367-80488474 (-)
CBA/J MGP_CBAJ_G0008080
 miRNA gene Chr15:86188899-86189006 (-)
DBA/2J MGP_DBA2J_G0008115
 miRNA gene Chr15:77107058-77107165 (-)
FVB/NJ MGP_FVBNJ_G0008140
 miRNA gene Chr15:76128009-76128116 (-)
LP/J MGP_LPJ_G0008195
 miRNA gene Chr15:80577129-80577236 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0008105
 miRNA gene Chr15:91233860-91233967 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0008356
 miRNA gene Chr15:79810798-79810905 (-)
PWK/PhJ MGP_PWKPhJ_G0007909
 miRNA gene Chr15:77114337-77114444 (-)
SPRET/EiJ MGP_SPRETEiJ_G0007799
 miRNA gene Chr15:79616809-79616916 (-)
WSB/EiJ MGP_WSBEiJ_G0008065
 miRNA gene Chr15:80213763-80213870 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    15 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    23
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 100302600 NCBI Gene Model | MGI Sequence Detail 48 C57BL/6J ±  kb
transcript NR_028281 RefSeq | MGI Sequence Detail 48 Not Specified  
For the selected sequence
References
more
  • Summaries
    All 21
    Phenotypes 15
  • Earliest
    J:7688 Lane PW, et al., Association of megacolon with a new dominant spotting gene (Dom) in the mouse. J Hered. 1984 Nov-Dec;75(6):435-9
  • Latest
    J:285676 Suzuki A, et al., Genes and microRNAs associated with mouse cleft palate: A systematic review and bioinformatics analysis. Mech Dev. 2018 Apr;150:21-27
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/09/2024
MGI 6.23 		The Jackson Laboratory