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Map6d1 Gene Detail
Summary
  • Symbol
    Map6d1
  • Name
    MAP6 domain containing 1
  • Synonyms
    A330066I15Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:3607784
    NCBI Gene: 208158
  • Alliance
    gene page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr16:20052059-20060108 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 16, 12.39 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    48 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3607784
 protein coding gene Chr16:20052053-20060108 (-)
129S1/SvImJ MGP_129S1SvImJ_G0022638
 protein coding gene Chr16:17523970-17552312 (-)
A/J MGP_AJ_G0022600
 protein coding gene Chr16:16705254-16713302 (-)
AKR/J MGP_AKRJ_G0022575
 protein coding gene Chr16:17342940-17350988 (-)
BALB/cJ MGP_BALBcJ_G0022604
 protein coding gene Chr16:16852195-16860210 (-)
C3H/HeJ MGP_C3HHeJ_G0022369
 protein coding gene Chr16:17504619-17512667 (-)
C57BL/6NJ MGP_C57BL6NJ_G0023055
 protein coding gene Chr16:17877171-17885241 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0020572
 protein coding gene Chr16:17396880-17404883 (-)
CAST/EiJ MGP_CASTEiJ_G0021899
 protein coding gene Chr16:17482064-17490147 (-)
CBA/J MGP_CBAJ_G0022341
 protein coding gene Chr16:18605074-18613767 (-)
DBA/2J MGP_DBA2J_G0022473
 protein coding gene Chr16:16635192-16643240 (-)
FVB/NJ MGP_FVBNJ_G0022448
 protein coding gene Chr16:16666733-16674759 (-)
LP/J MGP_LPJ_G0022540
 protein coding gene Chr16:17284930-17293022 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0022468
 protein coding gene Chr16:18312493-18320575 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0023066
 protein coding gene Chr16:17293667-17301693 (-)
PWK/PhJ MGP_PWKPhJ_G0021640
 protein coding gene Chr16:16881448-16889438 (-)
SPRET/EiJ MGP_SPRETEiJ_G0021469
 protein coding gene Chr16:17095561-17103501 (-)
WSB/EiJ MGP_WSBEiJ_G0021943
 protein coding gene Chr16:17292303-17301563 (-)



Homology
more
  • Human Ortholog
    MAP6D1, MAP6 domain containing 1
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    MAP6D1, MAP6 domain containing 1
  • Synonyms
    MAPO6D1, SL21
  • Links
    NCBI Gene ID: 79929
    neXtProt AC: NX_Q9H9H5
    UniProt: Q9H9H5

  • Chr Location
    3q27.1; chr3:183815922-183825594 (-)  GRCh38
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    13
  • GO References
    3
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    10
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 208158 NCBI Gene Model | MGI Sequence Detail 8050 C57BL/6J ±  kb
transcript NM_198599 RefSeq | MGI Sequence Detail 3290 C57BL/6  
polypeptide Q14BB9 UniProt | EBI | MGI Sequence Detail 191 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 10
    cDNA 10

    Microarray probesets 3
References
more
  • Summaries
    All 19
    Gene Ontology 3
  • Earliest
    J:116920 Gory-Faure S, et al., STOP-like protein 21 is a novel member of the STOP family, revealing a Golgi localization of STOP proteins. J Biol Chem. 2006 Sep 22;281(38):28387-96
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/09/2024
MGI 6.23 		The Jackson Laboratory