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Cfap300 Gene Detail
Summary
  • Symbol
    Cfap300
  • Name
    cilia and flagella associated protein 300
  • Synonyms
    9230110C19Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:3045346
    NCBI Gene: 234912
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr9:8021673-8042824 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 9, 2.46 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    100 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3045346
 protein coding gene Chr9:8021673-8042876 (-)
129S1/SvImJ MGP_129S1SvImJ_G0034332
 protein coding gene Chr9:4916836-4940179 (-)
A/J MGP_AJ_G0034310
 protein coding gene Chr9:5007977-5029721 (-)
AKR/J MGP_AKRJ_G0034238
 protein coding gene Chr9:4882005-4904765 (-)
BALB/cJ MGP_BALBcJ_G0034304
 protein coding gene Chr9:4742757-4762146 (-)
C3H/HeJ MGP_C3HHeJ_G0034015
 protein coding gene Chr9:5058928-5080081 (-)
C57BL/6NJ MGP_C57BL6NJ_G0034826
 protein coding gene Chr9:5093036-5114141 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0031764
 protein coding gene Chr9:4239564-4261008 (-)
CAST/EiJ MGP_CASTEiJ_G0033343
 protein coding gene Chr9:5084718-5104902 (-)
CBA/J MGP_CBAJ_G0033988
 protein coding gene Chr9:5262355-5283326 (-)
DBA/2J MGP_DBA2J_G0034145
 protein coding gene Chr9:4878303-4898465 (-)
FVB/NJ MGP_FVBNJ_G0034090
 protein coding gene Chr9:4648863-4668458 (-)
LP/J MGP_LPJ_G0034231
 protein coding gene Chr9:4946779-4968789 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0034134
 protein coding gene Chr9:5956941-5979252 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0034845
 protein coding gene Chr9:4883422-4906084 (-)
PWK/PhJ MGP_PWKPhJ_G0033046
 protein coding gene Chr9:4996062-5020163 (-)
SPRET/EiJ MGP_SPRETEiJ_G0032884
 protein coding gene Chr9:5117335-5138210 (-)
WSB/EiJ MGP_WSBEiJ_G0033458
 protein coding gene Chr9:4906902-4932949 (-)



Homology
more
  • Human Ortholog
    CFAP300, cilia and flagella associated protein 300
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    CFAP300, cilia and flagella associated protein 300
  • Synonyms
    C11orf70, CILD38, DNAAF17, FBB5
  • Links
    NCBI Gene ID: 85016
    neXtProt AC: NX_Q9BRQ4
    UniProt: Q9BRQ4

  • Chr Location
    11q22.1; chr11:102047437-102084554 (+)  GRCh38
Human Diseases
more
  • Diseases
    1 with human CFAP300 associations

Human Disease Mouse Models
      
IDs
Click on a disease name to see all genes associated with that disease.

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotypes from 1 allele in 1 genetic background
    7 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    3
  • GO References
    2
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    13
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000053070 Ensembl Gene Model | MGI Sequence Detail 21152 C57BL/6J ±  kb
    transcript ENSMUST00000065291 Ensembl | MGI Sequence Detail 1592 Not Applicable  
    polypeptide ENSMUSP00000063450 Ensembl | MGI Sequence Detail 267 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 15
      Genomic 2
      cDNA 13

      Microarray probesets 2
    References
    more
    • Summaries
      All 27
      Gene Ontology 2
      Phenotypes 7
    • Earliest
      J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14
    • Latest
      J:337482 Li-Villarreal N, et al., Three-dimensional microCT imaging of mouse heart development from early post-implantation to late fetal stages. Mamm Genome. 2023 Jan 3;
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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    Funding Information
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    Send questions and comments to User Support.     		last database update
    04/09/2024
    MGI 6.23     		The Jackson Laboratory