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Or5j3 Gene Detail
Summary
  • Symbol
    Or5j3
  • Name
    olfactory receptor family 5 subfamily J member 3
  • Synonyms
    GA_x6K02T2Q125-47777498-47778436, MOR172-1, Olfr1052
  • Feature Type
    protein coding gene
  • IDs
    MGI:3030886
    NCBI Gene: 259012
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr2:86128162-86129100 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 2, 49.77 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    38 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3030886
 protein coding gene Chr2:86122799-86129577 (+)
129S1/SvImJ MGP_129S1SvImJ_G0025965
 protein coding gene Chr2:87156236-87157174 (+)
A/J MGP_AJ_G0025934
 protein coding gene Chr2:83707083-83708021 (+)
AKR/J MGP_AKRJ_G0025906
 protein coding gene Chr2:85930887-85931825 (+)
BALB/cJ MGP_BALBcJ_G0025936
 protein coding gene Chr2:83891290-83892228 (+)
C3H/HeJ MGP_C3HHeJ_G0025693
 protein coding gene Chr2:86179015-86179953 (+)
C57BL/6NJ MGP_C57BL6NJ_G0026384
 protein coding gene Chr2:89987455-89988393 (+)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0025155
 protein coding gene Chr2:86734968-86735906 (+)
CBA/J MGP_CBAJ_G0025674
 protein coding gene Chr2:92997631-92998569 (+)
DBA/2J MGP_DBA2J_G0025805
 protein coding gene Chr2:83253087-83254025 (+)
FVB/NJ MGP_FVBNJ_G0025768
 protein coding gene Chr2:82430496-82431434 (+)
LP/J MGP_LPJ_G0025902
 protein coding gene Chr2:87108370-87109308 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0025796
 protein coding gene Chr2:95464535-95465473 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0026439
 protein coding gene Chr2:86159533-86160471 (+)
PWK/PhJ MGP_PWKPhJ_G0024896
 protein coding gene Chr2:83155330-83156268 (+)
SPRET/EiJ MGP_SPRETEiJ_G0024704
 protein coding gene Chr2:86221292-86222230 (+)
WSB/EiJ MGP_WSBEiJ_G0025225
 protein coding gene Chr2:86822518-86823456 (+)



Homology
more
  • Human Ortholog
    OR5J2, olfactory receptor family 5 subfamily J member 2
  • Vertebrate Orthologs
    1
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    OR5J2, olfactory receptor family 5 subfamily J member 2
  • Synonyms
    OR11-266
  • Links
    NCBI Gene ID: 282775
    neXtProt AC: NX_Q8NH18
    UniProt: Q8NH18

  • Chr Location
    11q12.1; chr11:56176618-56177556 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    9
  • GO References
    5
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    708
  • Tissues
    1
  • cDNA Data
    4
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 259012 NCBI Gene Model | MGI Sequence Detail 939 C57BL/6J ±  kb
transcript NM_147010 RefSeq | MGI Sequence Detail 939 C57BL/6  
polypeptide Q8VGR8 UniProt | EBI | MGI Sequence Detail 312 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 4
    cDNA 4

    Microarray probesets 1
References
more
  • Summaries
    All 24
    Developmental Gene Expression 1
    Gene Ontology 5
    Phenotypes 5
  • Earliest
    J:74521 Zhang X, et al., The olfactory receptor gene superfamily of the mouse. Nat Neurosci. 2002 Feb;5(2):124-33
  • Latest
    J:289678 Olender T, et al., A unified nomenclature for vertebrate olfactory receptors. BMC Evol Biol. 2020 Apr 15;20(1):42
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/09/2024
MGI 6.23 		The Jackson Laboratory