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Or2aj6 Gene Detail
Summary
  • Symbol
    Or2aj6
  • Name
    olfactory receptor family 2 subfamily AJ member 6
  • Synonyms
    GA_x54KRFPKG5P-16071018-16070077, MOR273-1, MOR273-5, Olfr171
  • Feature Type
    protein coding gene
  • IDs
    MGI:3030005
    NCBI Gene: 258960
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr16:19442907-19443851 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 16, 12.15 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    18 from dbSNP Build 142
  • Strain Annotations
    13
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3030005
 protein coding gene Chr16:19442680-19448666 (-)
129S1/SvImJ MGP_129S1SvImJ_G0022630
 protein coding gene Chr16:16882753-16910509 (-)
A/J MGP_AJ_G0022592
 protein coding gene Chr16:16104344-16113161 (-)
AKR/J MGP_AKRJ_G0022567
 protein coding gene Chr16:16679508-16680824 (-)
BALB/cJ MGP_BALBcJ_G0022596
 protein coding gene Chr16:16190973-16244409 (-)
C3H/HeJ no annotation
C57BL/6NJ MGP_C57BL6NJ_G0023048
 protein coding gene Chr16:17234903-17253626 (-)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0021891
 protein coding gene Chr16:16807032-16886326 (-)
CBA/J MGP_CBAJ_G0022332
 protein coding gene Chr16:17898435-17916408 (-)
DBA/2J MGP_DBA2J_G0022464
 protein coding gene Chr16:16000039-16007940 (-)
FVB/NJ MGP_FVBNJ_G0022439
 protein coding gene Chr16:16063803-16071579 (-)
LP/J MGP_LPJ_G0022531
 protein coding gene Chr16:16657370-16685202 (-)
NOD/ShiLtJ no annotation
NZO/HlLtJ MGP_NZOHlLtJ_G0023058
 protein coding gene Chr16:16595896-16673813 (-)
PWK/PhJ no annotation
SPRET/EiJ MGP_SPRETEiJ_G0021461
 protein coding gene Chr16:16503654-16509725 (-)
WSB/EiJ no annotation



Homology
more
  • Human Ortholog
    OR2AJ1, olfactory receptor family 2 subfamily AJ member 1
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    OR2AJ1, olfactory receptor family 2 subfamily AJ member 1
  • Synonyms
    OR2AJ1P, OR2AJ1Q
  • Links
    NCBI Gene ID: 127608
    UniProt: Q8NGZ0

  • Chr Location
    1q44; chr1:247924889-247935339 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    7
  • GO References
    2
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 258960 NCBI Gene Model | MGI Sequence Detail 945 C57BL/6J ±  kb
transcript NM_146958 RefSeq | MGI Sequence Detail 945 Not Specified  
polypeptide NP_667169 RefSeq | MGI Sequence Detail 314 Not Specified  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR017452 GPCR, rhodopsin-like, 7TM
    IPR000276 G protein-coupled receptor, rhodopsin-like
    IPR000725 Olfactory receptor
Molecular
Reagents
less

  • Microarray probesets 1
References
more
  • Summaries
    All 13
    Gene Ontology 2
  • Earliest
    J:74521 Zhang X, et al., The olfactory receptor gene superfamily of the mouse. Nat Neurosci. 2002 Feb;5(2):124-33
  • Latest
    J:289678 Olender T, et al., A unified nomenclature for vertebrate olfactory receptors. BMC Evol Biol. 2020 Apr 15;20(1):42
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory