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Cdr2l Gene Detail
Summary
  • Symbol
    Cdr2l
  • Name
    cerebellar degeneration-related protein 2-like
  • Synonyms
    D030068L24Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2684867
    NCBI Gene: 237988
  • Alliance
    gene page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:115272742-115286958 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 80.84 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    42 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2684867
 protein coding gene Chr11:115272700-115286961 (+)
129S1/SvImJ MGP_129S1SvImJ_G0019383
 protein coding gene Chr11:119402429-119416598 (+)
A/J MGP_AJ_G0019352
 protein coding gene Chr11:114186688-114201999 (+)
AKR/J MGP_AKRJ_G0019322
 protein coding gene Chr11:117592772-117609027 (+)
BALB/cJ MGP_BALBcJ_G0019326
 protein coding gene Chr11:114602503-114616675 (+)
C3H/HeJ MGP_C3HHeJ_G0019132
 protein coding gene Chr11:117944175-117960199 (+)
C57BL/6NJ MGP_C57BL6NJ_G0019776
 protein coding gene Chr11:123039130-123054831 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0017399
 protein coding gene Chr11:111228311-111242216 (+)
CAST/EiJ MGP_CASTEiJ_G0018687
 protein coding gene Chr11:119257200-119270352 (+)
CBA/J MGP_CBAJ_G0019104
 protein coding gene Chr11:127893460-127907759 (+)
DBA/2J MGP_DBA2J_G0019215
 protein coding gene Chr11:113624267-113639131 (+)
FVB/NJ MGP_FVBNJ_G0019207
 protein coding gene Chr11:113100387-113114592 (+)
LP/J MGP_LPJ_G0019285
 protein coding gene Chr11:119782043-119800004 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0019240
 protein coding gene Chr11:127069642-127086888 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0019814
 protein coding gene Chr11:118250104-118264958 (+)
PWK/PhJ MGP_PWKPhJ_G0018451
 protein coding gene Chr11:114905804-114921289 (+)
SPRET/EiJ MGP_SPRETEiJ_G0018244
 protein coding gene Chr11:117995821-118010500 (+)
WSB/EiJ MGP_WSBEiJ_G0018739
 protein coding gene Chr11:118198280-118214365 (+)



Homology
more
  • Human Ortholog
    CDR2L, cerebellar degeneration related protein 2 like
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    CDR2L, cerebellar degeneration related protein 2 like
  • Synonyms
    HUMPPA
  • Links
    NCBI Gene ID: 30850
    neXtProt AC: NX_Q86X02
    UniProt: Q86X02

  • Chr Location
    17q25.1; chr17:74987632-75005800 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    2
  • GO References
    2
Molecular Function

Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    15
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000050910 Ensembl Gene Model | MGI Sequence Detail 14217 C57BL/6J ±  kb
transcript ENSMUST00000053288 Ensembl | MGI Sequence Detail 3700 Not Applicable  
polypeptide ENSMUSP00000052096 Ensembl | MGI Sequence Detail 465 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 15
    cDNA 15

    Microarray probesets 3
References
more
  • Summaries
    All 22
    Gene Ontology 2
    Phenotypes 2
  • Earliest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/09/2024
MGI 6.23 		The Jackson Laboratory