About   Help   FAQ
Acsm5 Gene Detail
Summary
  • Symbol
    Acsm5
  • Name
    acyl-CoA synthetase medium-chain family member 5
  • Synonyms
    C730027J19Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2444086
    NCBI Gene: 272428
  • Alliance
    gene page
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:119125354-119142583 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, 63.94 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    90 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2444086
 protein coding gene Chr7:119118686-119144774 (+)
129S1/SvImJ MGP_129S1SvImJ_G0032912
 protein coding gene Chr7:123425112-123445433 (+)
A/J MGP_AJ_G0032895
 protein coding gene Chr7:120250499-120268340 (+)
AKR/J MGP_AKRJ_G0032827
 protein coding gene Chr7:123352152-123371071 (+)
BALB/cJ MGP_BALBcJ_G0032900
 protein coding gene Chr7:119978565-119995913 (+)
C3H/HeJ MGP_C3HHeJ_G0032610
 protein coding gene Chr7:123238900-123256191 (+)
C57BL/6NJ MGP_C57BL6NJ_G0033406
 protein coding gene Chr7:128321792-128343564 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0030378
 protein coding gene Chr7:121685907-121704217 (+)
CAST/EiJ MGP_CASTEiJ_G0031938
 protein coding gene Chr7:115002592-115021529 (+)
CBA/J MGP_CBAJ_G0032583
 protein coding gene Chr7:132606732-132623951 (+)
DBA/2J MGP_DBA2J_G0032735
 protein coding gene Chr7:118293085-118310443 (+)
FVB/NJ MGP_FVBNJ_G0032688
 protein coding gene Chr7:118139081-118156557 (+)
LP/J MGP_LPJ_G0032829
 protein coding gene Chr7:124896830-124917149 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0032720
 protein coding gene Chr7:134076614-134095232 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0033426
 protein coding gene Chr7:122323425-122341758 (+)
PWK/PhJ MGP_PWKPhJ_G0031646
 protein coding gene Chr7:111210124-111227765 (+)
SPRET/EiJ MGP_SPRETEiJ_G0031492
 protein coding gene Chr7:109077005-109095330 (+)
WSB/EiJ MGP_WSBEiJ_G0032051
 protein coding gene Chr7:123228311-123248575 (+)



Homology
more
  • Human Ortholog
    ACSM5, acyl-CoA synthetase medium chain family member 5
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    ACSM5, acyl-CoA synthetase medium chain family member 5
  • Links
    NCBI Gene ID: 54988
    neXtProt AC: NX_Q6NUN0
    UniProt: Q6NUN0

  • Chr Location
    16p12.3; chr16:20409534-20441336 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    10
  • GO References
    4
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    803
  • Tissues
    97
  • cDNA Data
    13
  • Literature Summary
    2
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 272428 NCBI Gene Model | MGI Sequence Detail 17230 C57BL/6J ±  kb
transcript NM_178758 RefSeq | MGI Sequence Detail 2505 FVB/N  
polypeptide Q8BGA8 UniProt | EBI | MGI Sequence Detail 578 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 13
    cDNA 13

    Microarray probesets 3
References
more
  • Summaries
    All 26
    Developmental Gene Expression 2
    Gene Ontology 4
    Phenotypes 4
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:326541 Cyagen Biosciences Inc., Cyagen Biosciences Website. 2022;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
04/09/2024
MGI 6.23 		The Jackson Laboratory