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B330016D10Rik Gene Detail
Summary
  • Symbol
    B330016D10Rik
  • Name
    RIKEN cDNA B330016D10 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:2444063
    NCBI Gene: 320456
  • Alliance
    gene page
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:141273473-141275624 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, 74.55 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    37 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2444063
 lncRNA gene Chr4:141273473-141275624 (+)
129S1/SvImJ MGP_129S1SvImJ_G0036451
 pseudogene Chr4:144618214-144619917 (+)
A/J MGP_AJ_G0036436
 pseudogene Chr4:138319847-138321550 (+)
AKR/J MGP_AKRJ_G0036387
 pseudogene Chr4:142327540-142329249 (+)
BALB/cJ MGP_BALBcJ_G0036428
 pseudogene Chr4:139013916-139015625 (+)
C3H/HeJ MGP_C3HHeJ_G0036119
 pseudogene Chr4:142693802-142695511 (+)
C57BL/6NJ MGP_C57BL6NJ_G0036940
 pseudogene Chr4:149635746-149637449 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0034047
 pseudogene Chr4:131230267-131231824 (+)
CAST/EiJ MGP_CASTEiJ_G0035315
 pseudogene Chr4:140956952-140958668 (+)
CBA/J MGP_CBAJ_G0036091
 pseudogene Chr4:154033207-154034916 (+)
DBA/2J MGP_DBA2J_G0036267
 pseudogene Chr4:138718241-138719944 (+)
FVB/NJ MGP_FVBNJ_G0036222
 pseudogene Chr4:137836176-137837879 (+)
LP/J MGP_LPJ_G0036319
 pseudogene Chr4:144642562-144644265 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0036223
 pseudogene Chr4:157812637-157814340 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0037049
 pseudogene Chr4:142848432-142850135 (+)
PWK/PhJ MGP_PWKPhJ_G0035012
 pseudogene Chr4:135606255-135607958 (+)
SPRET/EiJ MGP_SPRETEiJ_G0034829
 pseudogene Chr4:138661946-138663658 (+)
WSB/EiJ MGP_WSBEiJ_G0035508
 pseudogene Chr4:143132024-143133727 (+)



Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
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Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    17
Sequences &
Gene Models
less
  • All Sequences
    33
  • RefSeq
    1
  • UniProt
    2
Representative SequencesLengthStrain/SpeciesFlank
genomic 320456 NCBI Gene Model | MGI Sequence Detail 2152 C57BL/6J ±  kb
transcript NR_030695 RefSeq | MGI Sequence Detail 2152 C57BL/6  
polypeptide Q8BNQ7 UniProt | EBI | MGI Sequence Detail 177 Not Applicable  
For the selected sequence
Protein
Information
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  • UniProt
    2 Sequences
Molecular
Reagents
less
  • All nucleic 17
    cDNA 17

    Microarray probesets 3
References
more
  • Summaries
    All 16
    Phenotypes 3
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/09/2024
MGI 6.23 		The Jackson Laboratory