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AI467606 Gene Detail
Summary
  • Symbol
    AI467606
  • Name
    expressed sequence AI467606
  • Feature Type
    protein coding gene
  • IDs
    MGI:2141979
    NCBI Gene: 101602
  • Alliance
    gene page
  • Transcription Start Sites
    6 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:126690531-126693158 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, 69.32 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    33 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2141979
 protein coding gene Chr7:126689952-126693221 (+)
129S1/SvImJ MGP_129S1SvImJ_G0033020
 protein coding gene Chr7:131410812-131413439 (+)
A/J MGP_AJ_G0033003
 protein coding gene Chr7:127920980-127923608 (+)
AKR/J MGP_AKRJ_G0032935
 protein coding gene Chr7:131164481-131167111 (+)
BALB/cJ MGP_BALBcJ_G0033008
 protein coding gene Chr7:127583704-127586334 (+)
C3H/HeJ MGP_C3HHeJ_G0032718
 protein coding gene Chr7:131097200-131099827 (+)
C57BL/6NJ MGP_C57BL6NJ_G0033514
 protein coding gene Chr7:136515983-136518610 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0030486
 protein coding gene Chr7:129128727-129131414 (+)
CAST/EiJ MGP_CASTEiJ_G0032047
 protein coding gene Chr7:122891661-122894283 (+)
CBA/J MGP_CBAJ_G0032691
 protein coding gene Chr7:141113522-141116149 (+)
DBA/2J MGP_DBA2J_G0032843
 protein coding gene Chr7:125893679-125896306 (+)
FVB/NJ MGP_FVBNJ_G0032796
 protein coding gene Chr7:125744692-125747319 (+)
LP/J MGP_LPJ_G0032937
 protein coding gene Chr7:132880567-132883194 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0032828
 protein coding gene Chr7:142268843-142271472 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0033533
 protein coding gene Chr7:130171191-130173821 (+)
PWK/PhJ MGP_PWKPhJ_G0031754
 protein coding gene Chr7:118891266-118893883 (+)
SPRET/EiJ MGP_SPRETEiJ_G0031600
 protein coding gene Chr7:117014839-117017478 (+)
WSB/EiJ MGP_WSBEiJ_G0032159
 protein coding gene Chr7:131152621-131155249 (+)



Homology
more
  • Human Ortholog
    C16orf54, chromosome 16 open reading frame 54
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    C16orf54, chromosome 16 open reading frame 54
  • Synonyms
    SAIL
  • Links
    NCBI Gene ID: 283897
    neXtProt AC: NX_Q6UWD8
    UniProt: Q6UWD8

  • Chr Location
    16p11.2; chr16:29742463-29745990 (-)  GRCh38
Human Diseases
less
  • References
    3 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    43 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    1
  • GO References
    1
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    712
  • Tissues
    4
  • cDNA Data
    33
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000045165 Ensembl Gene Model | MGI Sequence Detail 2628 C57BL/6J ±  kb
transcript ENSMUST00000056288 Ensembl | MGI Sequence Detail 1932 Not Applicable  
polypeptide ENSMUSP00000063016 Ensembl | MGI Sequence Detail 225 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 33
    cDNA 33

    Microarray probesets 2
References
more
  • Summaries
    All 65
    Developmental Gene Expression 1
    Diseases 3
    Gene Ontology 1
    Phenotypes 43
  • Earliest
    J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563
  • Latest
    J:342026 Hasegawa Y, et al., Microglial cannabinoid receptor type 1 mediates social memory deficits in mice produced by adolescent THC exposure and 16p11.2 duplication. Nat Commun. 2023 Oct 25;14(1):6559
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/09/2024
MGI 6.23 		The Jackson Laboratory