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Rabif Gene Detail
Summary
  • Symbol
    Rabif
  • Name
    RAB interacting factor
  • Synonyms
    E130318E12Rik, MSS4, RASGFR3
  • Feature Type
    protein coding gene
  • IDs
    MGI:2138605
    NCBI Gene: 98710
  • Alliance
    gene page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr1:134422377-134435627 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 1, 58.24 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    211 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2138605
 protein coding gene Chr1:134422377-134436512 (+)
129S1/SvImJ MGP_129S1SvImJ_G0016509
 protein coding gene Chr1:138162771-138179422 (+)
A/J MGP_AJ_G0016492
 protein coding gene Chr1:132957349-132972623 (+)
AKR/J MGP_AKRJ_G0016457
 protein coding gene Chr1:136924508-136940643 (+)
BALB/cJ MGP_BALBcJ_G0016452
 protein coding gene Chr1:133292196-133306312 (+)
C3H/HeJ MGP_C3HHeJ_G0016278
 protein coding gene Chr1:137019794-137035936 (+)
C57BL/6NJ MGP_C57BL6NJ_G0016913
 protein coding gene Chr1:143194401-143212484 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0014624
 protein coding gene Chr1:126090203-126100135 (+)
CAST/EiJ MGP_CASTEiJ_G0015858
 protein coding gene Chr1:136080490-136096099 (+)
CBA/J MGP_CBAJ_G0016251
 protein coding gene Chr1:148144968-148163413 (+)
DBA/2J MGP_DBA2J_G0016357
 protein coding gene Chr1:131968368-131983472 (+)
FVB/NJ MGP_FVBNJ_G0016356
 protein coding gene Chr1:130602586-130619008 (+)
LP/J MGP_LPJ_G0016428
 protein coding gene Chr1:139437895-139452043 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0016381
 protein coding gene Chr1:153847739-153865138 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0016949
 protein coding gene Chr1:136667772-136686737 (+)
PWK/PhJ MGP_PWKPhJ_G0015644
 protein coding gene Chr1:130993604-131007516 (+)
SPRET/EiJ MGP_SPRETEiJ_G0015431
 protein coding gene Chr1:135627421-135643269 (+)
WSB/EiJ MGP_WSBEiJ_G0015921
 protein coding gene Chr1:136687902-136702625 (+)



Homology
more
  • Human Ortholog
    RABIF, RAB interacting factor
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    RABIF, RAB interacting factor
  • Synonyms
    MSS4, RASGFR3, RASGRF3
  • Links
    NCBI Gene ID: 5877
    neXtProt AC: NX_P47224
    UniProt: P47224

  • Chr Location
    1q32.1; chr1:202878282-202889149 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    13 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    9
  • GO References
    5
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    63
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 98710 NCBI Gene Model | MGI Sequence Detail 13251 C57BL/6J ±  kb
transcript NM_145510 RefSeq | MGI Sequence Detail 1985 C57BL/6  
polypeptide Q91X96 UniProt | EBI | MGI Sequence Detail 123 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 63
    cDNA 63

    Microarray probesets 6
Other
Accession IDs
less
MGI:2138336
References
more
  • Summaries
    All 38
    Gene Ontology 5
    Phenotypes 13
  • Earliest
    J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
  • Latest
    J:311758 Wu L, et al., Rab8a-AS160-MSS4 regulatory circuit controls lipid droplet fusion and growth. Dev Cell. 2014 Aug 25;30(4):378-93
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory