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Armcx1 Gene Detail
Summary
  • Symbol
    Armcx1
  • Name
    armadillo repeat containing, X-linked 1
  • Synonyms
    3010033I09Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1925498
    NCBI Gene: 78248
  • Alliance
    gene page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    ChrX:133618712-133622666 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome X, 56.24 cM, cytoband E3
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    42 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1925498
 protein coding gene ChrX:133618615-133623487 (+)
129S1/SvImJ MGP_129S1SvImJ_G0036075
 protein coding gene ChrX:131906498-131910411 (+)
A/J MGP_AJ_G0036055
 protein coding gene ChrX:131333566-131337490 (+)
AKR/J MGP_AKRJ_G0035977
 protein coding gene ChrX:135541165-135545078 (+)
BALB/cJ MGP_BALBcJ_G0036048
 protein coding gene ChrX:129772210-129776123 (+)
C3H/HeJ MGP_C3HHeJ_G0035751
 protein coding gene ChrX:131993512-131997425 (+)
C57BL/6NJ MGP_C57BL6NJ_G0036570
 protein coding gene ChrX:135794337-135798291 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0033398
 protein coding gene ChrX:123505794-123509762 (+)
CAST/EiJ MGP_CASTEiJ_G0035039
 protein coding gene ChrX:112860327-112864308 (+)
CBA/J MGP_CBAJ_G0035729
 protein coding gene ChrX:139874961-139878874 (+)
DBA/2J MGP_DBA2J_G0035883
 protein coding gene ChrX:130638226-130642139 (+)
FVB/NJ MGP_FVBNJ_G0035824
 protein coding gene ChrX:129963451-129967405 (+)
LP/J MGP_LPJ_G0035976
 protein coding gene ChrX:132793497-132797410 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0035853
 protein coding gene ChrX:147233278-147237232 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0036600
 protein coding gene ChrX:131346283-131350237 (+)
PWK/PhJ MGP_PWKPhJ_G0034731
 protein coding gene ChrX:109805759-109809849 (+)
SPRET/EiJ MGP_SPRETEiJ_G0034562
 protein coding gene ChrX:113510868-113514889 (+)
WSB/EiJ MGP_WSBEiJ_G0035177
 protein coding gene ChrX:129717842-129721792 (+)



Homology
more
  • Human Ortholog
    ARMCX1, armadillo repeat containing X-linked 1
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    ARMCX1, armadillo repeat containing X-linked 1
  • Synonyms
    ALEX1, GASP7
  • Links
    NCBI Gene ID: 51309
    neXtProt AC: NX_Q9P291
    UniProt: Q9P291

  • Chr Location
    Xq22.1; chrX:101550547-101554700 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotypes from 1 allele in 1 genetic background
    7 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    3
  • GO References
    3
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    769
  • Tissues
    11
  • cDNA Data
    11
  • Literature Summary
    4
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000033460 Ensembl Gene Model | MGI Sequence Detail 3955 C57BL/6J ±  kb
    transcript ENSMUST00000113197 Ensembl | MGI Sequence Detail 2179 Not Applicable  
    polypeptide ENSMUSP00000108822 Ensembl | MGI Sequence Detail 456 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 12
      cDNA 11
      Primer pair 1

      Microarray probesets 2
    References
    more
    • Summaries
      All 34
      Developmental Gene Expression 4
      Gene Ontology 3
      Phenotypes 7
    • Earliest
      J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
    • Latest
      J:332918 Cai S, et al., Transcriptomic analysis of the upper lip and primary palate development in mice. Front Genet. 2022;13:1039850
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    04/09/2024
    MGI 6.23     		The Jackson Laboratory