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Ddx10 Gene Detail
Summary
  • Symbol
    Ddx10
  • Name
    DEAD box helicase 10
  • Synonyms
    4632415A01Rik, DEAD (Asp-Glu-Ala-Asp) box polypeptide 10
  • Feature Type
    protein coding gene
  • IDs
    MGI:1924841
    NCBI Gene: 77591
  • Alliance
    gene page
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr9:53009935-53159353 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 9, 29.12 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    241 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1924841
 protein coding gene Chr9:53009754-53159423 (-)
129S1/SvImJ MGP_129S1SvImJ_G0034807
 protein coding gene Chr9:52095223-52253820 (-)
A/J MGP_AJ_G0034788
 protein coding gene Chr9:50466751-50615573 (-)
AKR/J MGP_AKRJ_G0034716
 protein coding gene Chr9:51549100-51708505 (-)
BALB/cJ MGP_BALBcJ_G0034780
 protein coding gene Chr9:50208386-50366715 (-)
C3H/HeJ MGP_C3HHeJ_G0034490
 protein coding gene Chr9:52030999-52192687 (-)
C57BL/6NJ MGP_C57BL6NJ_G0035299
 protein coding gene Chr9:53569726-53728677 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0032212
 protein coding gene Chr9:49870522-50013367 (-)
CAST/EiJ MGP_CASTEiJ_G0033812
 protein coding gene Chr9:52021228-52185362 (-)
CBA/J MGP_CBAJ_G0034461
 protein coding gene Chr9:55386820-55554741 (-)
DBA/2J MGP_DBA2J_G0034620
 protein coding gene Chr9:50349200-50497708 (-)
FVB/NJ MGP_FVBNJ_G0034562
 protein coding gene Chr9:49530161-49677719 (-)
LP/J MGP_LPJ_G0034702
 protein coding gene Chr9:52404457-52560553 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0034605
 protein coding gene Chr9:56969710-57141489 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0035321
 protein coding gene Chr9:51551294-51708848 (-)
PWK/PhJ MGP_PWKPhJ_G0033516
 protein coding gene Chr9:50320132-50473689 (-)
SPRET/EiJ MGP_SPRETEiJ_G0033352
 protein coding gene Chr9:51823613-51985434 (-)
WSB/EiJ MGP_WSBEiJ_G0033924
 protein coding gene Chr9:51552222-51710482 (-)



Homology
more
  • Human Ortholog
    DDX10, DEAD-box helicase 10
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    DDX10, DEAD-box helicase 10
  • Synonyms
    Dbp4, HRH-J8
  • Links
    NCBI Gene ID: 1662
    neXtProt AC: NX_Q13206
    UniProt: Q13206

  • Chr Location
    11q22.3; chr11:108665058-108940999 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    11 phenotypes from 2 alleles in 2 genetic backgrounds
    10 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Mice homozygous for a spontaneous allele exhibit craniofacial defects, including decreased cranium length, cleft palate, and short snout, and show reduced body size, body weight, lean body mass, and bone mineral content.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    7
  • GO References
    5
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    65
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000053289 Ensembl Gene Model | MGI Sequence Detail 149419 C57BL/6J ±  kb
    transcript ENSMUST00000065630 Ensembl | MGI Sequence Detail 3128 Not Applicable  
    polypeptide ENSMUSP00000065198 Ensembl | MGI Sequence Detail 875 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 65
      cDNA 65

      Microarray probesets 6
    Other
    Accession IDs
    less
    MGI:2143106
    References
    more
    • Summaries
      All 34
      Gene Ontology 5
      Phenotypes 10
    • Earliest
      J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
    • Latest
      J:223062 Palmer K, et al., Discovery and characterization of spontaneous mouse models of craniofacial dysmorphology. Dev Biol. 2016 Jul 15;415(2):216-27
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    04/16/2024
    MGI 6.23     		The Jackson Laboratory