About   Help   FAQ
Vxn Gene Detail
Summary
  • Symbol
    Vxn
  • Name
    vexin
  • Synonyms
    3110035E14Rik, R75066
  • Feature Type
    protein coding gene
  • IDs
    MGI:1924232
    NCBI Gene: 76982
  • Alliance
  • Transcription Start Sites
    7 TSS
Location &
Maps
more
  • Sequence Map
    Chr1:9671492-9697367 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
  • Genetic Map
    Chromosome 1, 2.08 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    224 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1924232
protein coding gene Chr1:9671424-9697368 (+)
129S1/SvImJ MGP_129S1SvImJ_G0015825
protein coding gene Chr1:6831830-6862798 (+)
A/J MGP_AJ_G0015807
protein coding gene Chr1:6906796-6933525 (+)
AKR/J MGP_AKRJ_G0015766
protein coding gene Chr1:6791744-6817231 (+)
BALB/cJ MGP_BALBcJ_G0015763
protein coding gene Chr1:6648152-6674102 (+)
C3H/HeJ MGP_C3HHeJ_G0015597
protein coding gene Chr1:6714436-6740015 (+)
C57BL/6NJ MGP_C57BL6NJ_G0016217
protein coding gene Chr1:7169045-7197693 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0013938
protein coding gene Chr1:5760694-5787922 (+)
CAST/EiJ MGP_CASTEiJ_G0015177
protein coding gene Chr1:6890739-6920177 (+)
CBA/J MGP_CBAJ_G0015570
protein coding gene Chr1:7326415-7351987 (+)
DBA/2J MGP_DBA2J_G0015669
protein coding gene Chr1:6536424-6563069 (+)
FVB/NJ MGP_FVBNJ_G0015674
protein coding gene Chr1:6449938-6477864 (+)
LP/J MGP_LPJ_G0015741
protein coding gene Chr1:7056297-7085090 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0015693
protein coding gene Chr1:7967245-7995707 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0016263
protein coding gene Chr1:6691360-6720271 (+)
PWK/PhJ MGP_PWKPhJ_G0014961
protein coding gene Chr1:6390572-6417934 (+)
SPRET/EiJ MGP_SPRETEiJ_G0014741
protein coding gene Chr1:6862209-6887784 (+)
WSB/EiJ MGP_WSBEiJ_G0015241
protein coding gene Chr1:6717618-6746178 (+)



Homology
more
  • Human Ortholog
    VXN, vexin
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    VXN, vexin
  • Synonyms
    C8orf46
  • Links
    NCBI Gene ID: 254778
    neXtProt AC: NX_Q8TAG6
    UniProt: Q8TAG6

  • Chr Location
    8q13.1; chr8:66492326-66518524 (+)  GRCh38

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 76982 NCBI Gene Model | MGI Sequence Detail 25876 C57BL/6J ±  kb
transcript NM_178399 RefSeq | MGI Sequence Detail 3187 C57BL/6  
polypeptide Q8BG31 UniProt | EBI | MGI Sequence Detail 207 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 17
    cDNA 17

    Microarray probesets 3
Other
Accession IDs
less
MGI:2138225, MGI:2138522, MGI:2138731
References
more
  • Summaries
    All 32
    Developmental Gene Expression 2
    Gene Ontology 3
    Phenotypes 5
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:313619 Bedogni F, et al., Cell-Type-Specific Gene Expression in Developing Mouse Neocortex: Intermediate Progenitors Implicated in Axon Development. Front Mol Neurosci. 2021;14:686034

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support.
last database update
03/19/2024
MGI 6.23
The Jackson Laboratory