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1700113H08Rik Gene Detail
Summary
  • Symbol
    1700113H08Rik
  • Name
    RIKEN cDNA 1700113H08 gene
  • Feature Type
    protein coding gene
  • IDs
    MGI:1923890
    NCBI Gene: 76640
  • Alliance
    gene page
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr10:86893909-87066451 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 10, 43.50 cM, cytoband C2
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    933 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1923890
 protein coding gene Chr10:86893909-87066461 (+)
129S1/SvImJ MGP_129S1SvImJ_G0017617
 protein coding gene Chr10:88051513-88226674 (+)
A/J MGP_AJ_G0017596
 protein coding gene Chr10:85145955-85303162 (+)
AKR/J MGP_AKRJ_G0017554
 protein coding gene Chr10:87527892-87695350 (+)
BALB/cJ MGP_BALBcJ_G0017559
 protein coding gene Chr10:85402543-85565214 (+)
C3H/HeJ MGP_C3HHeJ_G0017382
 protein coding gene Chr10:87529569-87691498 (+)
C57BL/6NJ MGP_C57BL6NJ_G0018016
 protein coding gene Chr10:91044925-91224979 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0015698
 protein coding gene Chr10:80944021-81101883 (+)
CAST/EiJ MGP_CASTEiJ_G0016947
 protein coding gene Chr10:87427332-87591721 (+)
CBA/J MGP_CBAJ_G0017351
 protein coding gene Chr10:94808756-94983344 (+)
DBA/2J MGP_DBA2J_G0017457
 protein coding gene Chr10:84246972-84409177 (+)
FVB/NJ MGP_FVBNJ_G0017449
 protein coding gene Chr10:83516473-83667570 (+)
LP/J MGP_LPJ_G0017531
 protein coding gene Chr10:88768312-88927144 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0017480
 protein coding gene Chr10:96368595-96528621 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0018053
 protein coding gene Chr10:87377577-87533800 (+)
PWK/PhJ MGP_PWKPhJ_G0016728
 protein coding gene Chr10:84264409-84418924 (+)
SPRET/EiJ MGP_SPRETEiJ_G0016516
 protein coding gene Chr10:86098331-86266297 (+)
WSB/EiJ MGP_WSBEiJ_G0017006
 protein coding gene Chr10:87343293-87508254 (+)



Homology
more
  • Human Ortholog
    C12orf42, chromosome 12 open reading frame 42
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    C12orf42, chromosome 12 open reading frame 42
  • Links
    NCBI Gene ID: 374470
    neXtProt AC: NX_Q96LP6
    UniProt: Q96LP6

  • Chr Location
    12q23.2-q23.3; chr12:103047624-103563790 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    6
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000047129 Ensembl Gene Model | MGI Sequence Detail 172543 C57BL/6J ±  kb
transcript ENSMUST00000169849 Ensembl | MGI Sequence Detail 1332 Not Applicable  
polypeptide ENSMUSP00000130852 Ensembl | MGI Sequence Detail 327 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    3 Sequences
  • InterPro Domains
    IPR029288 Protein of unknown function DUF4607
Molecular
Reagents
less
  • All nucleic 6
    cDNA 6

    Microarray probesets 4
References
more
  • Summaries
    All 22
    Phenotypes 5
  • Earliest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory