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Prr30 Gene Detail
Summary
  • Symbol
    Prr30
  • Name
    proline rich 30
  • Synonyms
    1700110M21Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1923877
    NCBI Gene: 76627
  • Alliance
    gene page
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr14:101435126-101437766 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 14, 50.90 cM, cytoband E2.2
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    41 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1923877
 protein coding gene Chr14:101435126-101437840 (-)
129S1/SvImJ MGP_129S1SvImJ_G0021620
 protein coding gene Chr14:97590693-97593333 (-)
A/J MGP_AJ_G0021578
 protein coding gene Chr14:94418204-94420844 (-)
AKR/J MGP_AKRJ_G0021554
 protein coding gene Chr14:97212493-97215133 (-)
BALB/cJ MGP_BALBcJ_G0021584
 protein coding gene Chr14:94757409-94760049 (-)
C3H/HeJ MGP_C3HHeJ_G0021362
 protein coding gene Chr14:97108647-97111287 (-)
C57BL/6NJ MGP_C57BL6NJ_G0022024
 protein coding gene Chr14:101532517-101535157 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0019564
 protein coding gene Chr14:91377705-91380329 (-)
CAST/EiJ MGP_CASTEiJ_G0020879
 protein coding gene Chr14:94441254-94443886 (-)
CBA/J MGP_CBAJ_G0021330
 protein coding gene Chr14:105298087-105300727 (-)
DBA/2J MGP_DBA2J_G0021454
 protein coding gene Chr14:93901624-93904264 (-)
FVB/NJ MGP_FVBNJ_G0021431
 protein coding gene Chr14:92903733-92906373 (-)
LP/J MGP_LPJ_G0021522
 protein coding gene Chr14:98385288-98387928 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0021458
 protein coding gene Chr14:108016948-108019588 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0022047
 protein coding gene Chr14:96716509-96719149 (-)
PWK/PhJ MGP_PWKPhJ_G0020622
 protein coding gene Chr14:90906288-90908928 (-)
SPRET/EiJ MGP_SPRETEiJ_G0020460
 protein coding gene Chr14:92741265-92743885 (-)
WSB/EiJ MGP_WSBEiJ_G0020932
 protein coding gene Chr14:97346059-97348699 (-)



Homology
more
  • Human Ortholog
    PRR30, proline rich 30
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    PRR30, proline rich 30
  • Synonyms
    C2orf53
  • Links
    NCBI Gene ID: 339779
    neXtProt AC: NX_Q53SZ7
    UniProt: Q53SZ7

  • Chr Location
    2p23.3; chr2:27136848-27139410 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    11
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000042888 Ensembl Gene Model | MGI Sequence Detail 2641 C57BL/6J ±  kb
transcript ENSMUST00000187304 Ensembl | MGI Sequence Detail 2104 Not Applicable  
polypeptide ENSMUSP00000139590 Ensembl | MGI Sequence Detail 401 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 11
    cDNA 11

    Microarray probesets 3
References
more
  • Summaries
    All 21
    Phenotypes 4
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/09/2024
MGI 6.23 		The Jackson Laboratory