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Tprg1 Gene Detail
Summary
  • Symbol
    Tprg1
  • Name
    transformation related protein 63 regulated 1
  • Synonyms
    5430420C16Rik, Tprg
  • Feature Type
    protein coding gene
  • IDs
    MGI:1918588
    NCBI Gene: 71338
  • Alliance
    gene page
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr16:25105567-25241094 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 16, 17.00 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    993 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1918588
 protein coding gene Chr16:25105567-25242338 (+)
129S1/SvImJ MGP_129S1SvImJ_G0022690
 protein coding gene Chr16:22964364-23115525 (+)
A/J MGP_AJ_G0022652
 protein coding gene Chr16:21887529-22025030 (+)
AKR/J MGP_AKRJ_G0022626
 protein coding gene Chr16:22777542-22923345 (+)
BALB/cJ MGP_BALBcJ_G0022657
 protein coding gene Chr16:22080042-22224978 (+)
C3H/HeJ MGP_C3HHeJ_G0022421
 protein coding gene Chr16:22882667-23026505 (+)
C57BL/6NJ MGP_C57BL6NJ_G0023106
 protein coding gene Chr16:23482185-23648094 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0020624
 protein coding gene Chr16:22493438-22631400 (+)
CAST/EiJ MGP_CASTEiJ_G0021950
 protein coding gene Chr16:22934351-23082082 (+)
CBA/J MGP_CBAJ_G0022392
 protein coding gene Chr16:24450954-24608407 (+)
DBA/2J MGP_DBA2J_G0022524
 protein coding gene Chr16:21833606-21971547 (+)
FVB/NJ MGP_FVBNJ_G0022500
 protein coding gene Chr16:21823752-21959106 (+)
LP/J MGP_LPJ_G0022592
 protein coding gene Chr16:22743092-22885382 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0022519
 protein coding gene Chr16:23913903-24060797 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0023118
 protein coding gene Chr16:22737568-22882589 (+)
PWK/PhJ MGP_PWKPhJ_G0021689
 protein coding gene Chr16:22119344-22256517 (+)
SPRET/EiJ MGP_SPRETEiJ_G0021520
 protein coding gene Chr16:22506318-22652808 (+)
WSB/EiJ MGP_WSBEiJ_G0021994
 protein coding gene Chr16:22693629-22839380 (+)



Homology
more
  • Human Ortholog
    TPRG1, tumor protein p63 regulated 1
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    TPRG1, tumor protein p63 regulated 1
  • Synonyms
    FAM79B
  • Links
    NCBI Gene ID: 285386
    neXtProt AC: NX_Q6ZUI0
    UniProt: Q6ZUI0

  • Chr Location
    3q28; chr3:188947214-189325304 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotypes from 1 allele in 1 genetic background
    5 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    2
  • GO References
    2
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    731
  • Tissues
    22
  • cDNA Data
    6
  • Literature Summary
    1
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000048399 Ensembl Gene Model | MGI Sequence Detail 135528 C57BL/6J ±  kb
    transcript ENSMUST00000056087 Ensembl | MGI Sequence Detail 1084 Not Applicable  
    polypeptide ENSMUSP00000052585 Ensembl | MGI Sequence Detail 279 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 8
      cDNA 7
      Primer pair 1

      Microarray probesets 2
    References
    more
    • Summaries
      All 23
      Developmental Gene Expression 1
      Gene Ontology 2
      Phenotypes 5
    • Earliest
      J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
    • Latest
      J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    04/09/2024
    MGI 6.23     		The Jackson Laboratory