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Dhx16 Gene Detail
Summary
  • Symbol
    Dhx16
  • Name
    DEAH-box helicase 16
  • Synonyms
    2410006N22Rik, DBP2, Ddx16, DEAH (Asp-Glu-Ala-His) box polypeptide 16
  • Feature Type
    protein coding gene
  • IDs
    MGI:1916442
    NCBI Gene: 69192
  • Alliance
    gene page
  • Transcription Start Sites
    6 TSS
Location &
Maps
more
  • Sequence Map
    Chr17:36190711-36203562 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 17, 18.74 cM, cytoband B3
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    2 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1916442
 protein coding gene Chr17:36190657-36203562 (+)
129S1/SvImJ MGP_129S1SvImJ_G0023658
 protein coding gene Chr17:36084569-36098312 (+)
A/J MGP_AJ_G0023613
 protein coding gene Chr17:34960807-34974853 (+)
AKR/J MGP_AKRJ_G0023583
 protein coding gene Chr17:35396718-35411632 (+)
BALB/cJ MGP_BALBcJ_G0023618
 protein coding gene Chr17:35106833-35122402 (+)
C3H/HeJ MGP_C3HHeJ_G0023384
 protein coding gene Chr17:35856480-35870866 (+)
C57BL/6NJ MGP_C57BL6NJ_G0024060
 protein coding gene Chr17:37551856-37566531 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0021538
 protein coding gene Chr17:32657229-32668652 (+)
CAST/EiJ MGP_CASTEiJ_G0022875
 protein coding gene Chr17:35965356-35982657 (+)
CBA/J MGP_CBAJ_G0023362
 protein coding gene Chr17:39135078-39149533 (+)
DBA/2J MGP_DBA2J_G0023486
 protein coding gene Chr17:34266619-34280530 (+)
FVB/NJ MGP_FVBNJ_G0023457
 protein coding gene Chr17:34061848-34075993 (+)
LP/J MGP_LPJ_G0023566
 protein coding gene Chr17:36464494-36484358 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0023478
 protein coding gene Chr17:37910669-37924174 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0024103
 protein coding gene Chr17:35704095-35720261 (+)
PWK/PhJ MGP_PWKPhJ_G0022626
 protein coding gene Chr17:33127764-33139543 (+)
SPRET/EiJ MGP_SPRETEiJ_G0022445
 protein coding gene Chr17:33754774-33767895 (+)
WSB/EiJ MGP_WSBEiJ_G0022941
 protein coding gene Chr17:35853151-35867703 (+)



Homology
more
  • Human Ortholog
    DHX16, DEAH-box helicase 16
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    DHX16, DEAH-box helicase 16
  • Synonyms
    DBP2, DDX16, NMOAS, PRO2014, Prp2, PRP8, PRPF2
  • Links
    NCBI Gene ID: 8449
    neXtProt AC: NX_O60231
    UniProt: O60231

  • Chr Location
    6p21.33; chr6:30653119-30673006 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotypes from 1 allele in 1 genetic background
    11 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    13
  • GO References
    2
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    757
  • Tissues
    33
  • cDNA Data
    85
  • Literature Summary
    1
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000024422 Ensembl Gene Model | MGI Sequence Detail 12852 C57BL/6J ±  kb
    transcript ENSMUST00000025292 Ensembl | MGI Sequence Detail 3351 Not Applicable  
    polypeptide ENSMUSP00000025292 Ensembl | MGI Sequence Detail 1044 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    • UniProt
      5 Sequences
    • EC
      3.6.4.13
    • InterPro Domains
      IPR011709 DEAD-box helicase, OB fold
      IPR011545 DEAD/DEAH box helicase domain
      IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site
      IPR007502 Helicase-associated domain
      IPR048333 Helicase associated domain (HA2), winged-helix domain
      IPR001650 Helicase, C-terminal domain-like
      IPR014001 Helicase superfamily 1/2, ATP-binding domain
      IPR027417 P-loop containing nucleoside triphosphate hydrolase
    Molecular
    Reagents
    less
    • All nucleic 85
      cDNA 85

      Microarray probesets 3
    References
    more
    • Summaries
      All 33
      Developmental Gene Expression 1
      Gene Ontology 2
      Phenotypes 11
    • Earliest
      J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
    • Latest
      J:228563 Koscielny G, et al., The International Mouse Phenotyping Consortium Web Portal, a unified point of access for knockout mice and related phenotyping data. Nucleic Acids Res. 2014 Jan;42(Database issue):D802-9
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    04/09/2024
    MGI 6.23     		The Jackson Laboratory