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Rpp21 Gene Detail
Summary
  • Symbol
    Rpp21
  • Name
    ribonuclease P 21 subunit
  • Synonyms
    0610037N01Rik, Rpp21
  • Feature Type
    protein coding gene
  • IDs
    MGI:1914926
    NCBI Gene: 67676
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr17:36566565-36568738 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 17, 19.01 cM, cytoband B3
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1914926
 protein coding gene Chr17:36566537-36568961 (-)
129S1/SvImJ MGP_129S1SvImJ_G0023672
 protein coding gene Chr17:36609903-36612322 (-)
A/J MGP_AJ_G0023629
 protein coding gene Chr17:35403827-35406259 (-)
AKR/J MGP_AKRJ_G0023600
 protein coding gene Chr17:35819894-35822315 (-)
BALB/cJ MGP_BALBcJ_G0023636
 protein coding gene Chr17:35598866-35601288 (-)
C3H/HeJ MGP_C3HHeJ_G0023398
 protein coding gene Chr17:36323918-36326336 (-)
C57BL/6NJ MGP_C57BL6NJ_G0024074
 protein coding gene Chr17:38076298-38078722 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0021549
 protein coding gene Chr17:33329760-33332156 (-)
CAST/EiJ MGP_CASTEiJ_G0022887
 protein coding gene Chr17:36357832-36360251 (-)
CBA/J MGP_CBAJ_G0023376
 protein coding gene Chr17:39639487-39641905 (-)
DBA/2J MGP_DBA2J_G0023500
 protein coding gene Chr17:34761470-34763892 (-)
FVB/NJ MGP_FVBNJ_G0023473
 protein coding gene Chr17:34463207-34465637 (-)
LP/J MGP_LPJ_G0023579
 protein coding gene Chr17:37019371-37022036 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0023496
 protein coding gene Chr17:38446455-38448879 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0024120
 protein coding gene Chr17:36129451-36131870 (-)
PWK/PhJ MGP_PWKPhJ_G0022638
 protein coding gene Chr17:33567798-33570269 (-)
SPRET/EiJ MGP_SPRETEiJ_G0022458
 protein coding gene Chr17:34254103-34256537 (-)
WSB/EiJ MGP_WSBEiJ_G0022956
 protein coding gene Chr17:36364996-36367424 (-)



Homology
more
  • Human Ortholog
    RPP21, ribonuclease P/MRP subunit p21
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    RPP21, ribonuclease P/MRP subunit p21
  • Synonyms
    C6orf135, CAT60
  • Links
    NCBI Gene ID: 79897
    neXtProt AC: NX_Q9H633
    UniProt: Q9H633

  • Chr Location
    6p22.1; chr6:30345131-30346884 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    11
  • GO References
    5
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    50
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 67676 NCBI Gene Model | MGI Sequence Detail 2174 C57BL/6J ±  kb
transcript NM_026308 RefSeq | MGI Sequence Detail 500 C57BL/6  
polypeptide Q8R040 UniProt | EBI | MGI Sequence Detail 150 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 50
    cDNA 50

    Microarray probesets 3
References
more
  • Summaries
    All 28
    Gene Ontology 5
    Phenotypes 4
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:190754 Ermakova O, et al., Construction and phenotypic analysis of mice carrying a duplication of the major histocompatibility class I (MHC-I) locus. Mamm Genome. 2012 Aug;23(7-8):443-53
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/09/2024
MGI 6.23 		The Jackson Laboratory