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Znrd2 Gene Detail
Summary
  • Symbol
    Znrd2
  • Name
    zinc ribbon domain containing 2
  • Synonyms
    1500016H19Rik, Sjogren's syndrome/scleroderma autoantigen 1 homolog (human), Sssca1
  • Feature Type
    protein coding gene
  • IDs
    MGI:1913482
    NCBI Gene: 56390
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr19:5780334-5781760 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 19, 4.34 cM, cytoband A
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    11 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1913482
 protein coding gene Chr19:5780331-5781760 (-)
129S1/SvImJ MGP_129S1SvImJ_G0024726
 protein coding gene Chr19:2713935-2717579 (-)
A/J MGP_AJ_G0024692
 protein coding gene Chr19:2568130-2571773 (-)
AKR/J MGP_AKRJ_G0024665
 protein coding gene Chr19:2636831-2640474 (-)
BALB/cJ MGP_BALBcJ_G0024692
 protein coding gene Chr19:2563247-2566890 (-)
C3H/HeJ MGP_C3HHeJ_G0024460
 protein coding gene Chr19:2651888-2655531 (-)
C57BL/6NJ MGP_C57BL6NJ_G0025139
 protein coding gene Chr19:2784367-2788011 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0022569
 protein coding gene Chr19:2477704-2481332 (-)
CAST/EiJ MGP_CASTEiJ_G0023931
 protein coding gene Chr19:2671676-2675326 (-)
CBA/J MGP_CBAJ_G0024432
 protein coding gene Chr19:2912213-2915857 (-)
DBA/2J MGP_DBA2J_G0024559
 protein coding gene Chr19:2563475-2567119 (-)
FVB/NJ MGP_FVBNJ_G0024525
 protein coding gene Chr19:2560544-2564187 (-)
LP/J MGP_LPJ_G0024645
 protein coding gene Chr19:2688960-2692604 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0024555
 protein coding gene Chr19:2750141-2753784 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0025187
 protein coding gene Chr19:2653887-2657531 (-)
PWK/PhJ MGP_PWKPhJ_G0023677
 protein coding gene Chr19:2587069-2590717 (-)
SPRET/EiJ MGP_SPRETEiJ_G0023483
 protein coding gene Chr19:2642177-2643602 (-)
WSB/EiJ MGP_WSBEiJ_G0023993
 protein coding gene Chr19:2664959-2668609 (-)



Homology
more
  • Human Ortholog
    ZNRD2, zinc ribbon domain containing 2
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    ZNRD2, zinc ribbon domain containing 2
  • Synonyms
    p27, SSSCA1
  • Links
    NCBI Gene ID: 10534
    neXtProt AC: NX_O60232
    UniProt: O60232

  • Chr Location
    11q13.1; chr11:65570460-65573942 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    5
  • GO References
    1
Molecular Function

Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    790
  • Tissues
    36
  • cDNA Data
    72
  • Literature Summary
    3
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 56390 NCBI Gene Model | MGI Sequence Detail 1427 C57BL/6J ±  kb
transcript NM_020491 RefSeq | MGI Sequence Detail 719 C57BL/6  
polypeptide P56873 UniProt | EBI | MGI Sequence Detail 199 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 74
    cDNA 73
    Primer pair 1

    Microarray probesets 4
References
more
  • Summaries
    All 26
    Developmental Gene Expression 3
    Gene Ontology 1
    Phenotypes 2
  • Earliest
    J:57923 Sakuma-Takagi M, et al., Novel related cDNAs (C184L, C184M, and C184S) from developing mouse brain encoding two apparently unrelated proteins. Biochem Biophys Res Commun. 1999 Oct 5;263(3):737-42
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/09/2024
MGI 6.23 		The Jackson Laboratory