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Polr1h Gene Detail
Summary
  • Symbol
    Polr1h
  • Name
    RNA polymerase I subunit H
  • Synonyms
    1110014N07Rik, Znrd1
  • Feature Type
    protein coding gene
  • IDs
    MGI:1913386
    NCBI Gene: 66136
  • Alliance
    gene page
  • Transcription Start Sites
    6 TSS
Location &
Maps
more
  • Sequence Map
    Chr17:37265250-37269417 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 17, 19.16 cM, cytoband B3
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1913386
 protein coding gene Chr17:37265248-37269451 (-)
129S1/SvImJ MGP_129S1SvImJ_G0023689
 protein coding gene Chr17:37310337-37315879 (-)
A/J MGP_AJ_G0023647
 protein coding gene Chr17:36133623-36138581 (-)
AKR/J MGP_AKRJ_G0023618
 protein coding gene Chr17:36568472-36572473 (-)
BALB/cJ MGP_BALBcJ_G0023654
 protein coding gene Chr17:36376302-36380634 (-)
C3H/HeJ MGP_C3HHeJ_G0023416
 protein coding gene Chr17:37083150-37087113 (-)
C57BL/6NJ MGP_C57BL6NJ_G0024092
 protein coding gene Chr17:38905040-38909078 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0021560
 protein coding gene Chr17:33949153-33953422 (-)
CAST/EiJ MGP_CASTEiJ_G0022901
 protein coding gene Chr17:37214150-37218195 (-)
CBA/J MGP_CBAJ_G0023393
 protein coding gene Chr17:40423110-40427308 (-)
DBA/2J MGP_DBA2J_G0023518
 protein coding gene Chr17:35526278-35530842 (-)
FVB/NJ MGP_FVBNJ_G0023491
 protein coding gene Chr17:35134760-35138757 (-)
LP/J MGP_LPJ_G0023596
 protein coding gene Chr17:37840163-37846150 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0023514
 protein coding gene Chr17:39217751-39221958 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0024137
 protein coding gene Chr17:36908368-36913810 (-)
PWK/PhJ MGP_PWKPhJ_G0022653
 protein coding gene Chr17:34304797-34309308 (-)
SPRET/EiJ MGP_SPRETEiJ_G0022472
 protein coding gene Chr17:34994146-35000101 (-)
WSB/EiJ MGP_WSBEiJ_G0022968
 protein coding gene Chr17:37227640-37234216 (-)



Homology
more
  • Human Ortholog
    POLR1H, RNA polymerase I subunit H
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    POLR1H, RNA polymerase I subunit H
  • Synonyms
    A12.2, HTEX6, HTEX-6, hZR14, Rpa12, tctex-6, TCTEX6, TEX6, ZNRD1, ZR14
  • Links
    NCBI Gene ID: 30834
    neXtProt AC: NX_Q9P1U0
    UniProt: Q9P1U0

  • Chr Location
    6p22.1; chr6:30058899-30064909 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    7 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    6
  • GO References
    3
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    836
  • Tissues
    121
  • cDNA Data
    50
  • Literature Summary
    4
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic 66136 NCBI Gene Model | MGI Sequence Detail 4168 C57BL/6J ±  kb
transcript NM_001355422 RefSeq | MGI Sequence Detail 702 C57BL/6  
polypeptide Q791N7 UniProt | EBI | MGI Sequence Detail 123 Not Applicable  
For the selected sequence
Protein
Information
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  • UniProt
    2 Sequences
  • Protein Ontology
    PR:000018205 DNA-directed RNA polymerase I subunit RPA12
    (term hierarchy)
  • InterPro Domains
    IPR019761 DNA-directed RNA polymerase M, 15kDa subunit, conserved site
    IPR012164 DNA-directed RNA polymerase subunit/transcription factor S
    IPR034004 Pol I subunit A12, C-terminal zinc ribbon
    IPR001222 Zinc finger, TFIIS-type
Molecular
Reagents
less
  • All nucleic 52
    cDNA 50
    Primer pair 2

    Microarray probesets 4
References
more
  • Summaries
    All 34
    Developmental Gene Expression 4
    Gene Ontology 3
    Phenotypes 7
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:190754 Ermakova O, et al., Construction and phenotypic analysis of mice carrying a duplication of the major histocompatibility class I (MHC-I) locus. Mamm Genome. 2012 Aug;23(7-8):443-53
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory