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Ubl3 Gene Detail
Summary
  • Symbol
    Ubl3
  • Name
    ubiquitin-like 3
  • Feature Type
    protein coding gene
  • IDs
    MGI:1344373
    NCBI Gene: 24109
  • Alliance
    gene page
  • Transcription Start Sites
    12 TSS
Location &
Maps
more
  • Sequence Map
    Chr5:148441445-148489599 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 5, 88.66 cM, cytoband G2-3
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    491 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1344373
 protein coding gene Chr5:148441441-148489689 (-)
129S1/SvImJ MGP_129S1SvImJ_G0030396
 protein coding gene Chr5:154245893-154295793 (-)
A/J MGP_AJ_G0030369
 protein coding gene Chr5:147667779-147715907 (-)
AKR/J MGP_AKRJ_G0030296
 protein coding gene Chr5:152240497-152288630 (-)
BALB/cJ MGP_BALBcJ_G0030378
 protein coding gene Chr5:148921182-148969253 (-)
C3H/HeJ MGP_C3HHeJ_G0030092
 protein coding gene Chr5:153201668-153249789 (-)
C57BL/6NJ MGP_C57BL6NJ_G0030833
 protein coding gene Chr5:159924276-159972433 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0028046
 protein coding gene Chr5:142078333-142127318 (-)
CAST/EiJ MGP_CASTEiJ_G0029494
 protein coding gene Chr5:152790662-152838742 (-)
CBA/J MGP_CBAJ_G0030070
 protein coding gene Chr5:166602038-166656214 (-)
DBA/2J MGP_DBA2J_G0030214
 protein coding gene Chr5:147356511-147405562 (-)
FVB/NJ MGP_FVBNJ_G0030168
 protein coding gene Chr5:146575054-146622990 (-)
LP/J MGP_LPJ_G0030301
 protein coding gene Chr5:154940858-154990864 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0030204
 protein coding gene Chr5:168800274-168853297 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0030863
 protein coding gene Chr5:152164299-152212440 (-)
PWK/PhJ MGP_PWKPhJ_G0029208
 protein coding gene Chr5:146489572-146538475 (-)
SPRET/EiJ MGP_SPRETEiJ_G0029044
 protein coding gene Chr5:149463393-149511602 (-)
WSB/EiJ MGP_WSBEiJ_G0029571
 protein coding gene Chr5:152973078-153021243 (-)



Homology
more
  • Human Ortholog
    UBL3, ubiquitin like 3
  • Vertebrate Orthologs
    4
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    UBL3, ubiquitin like 3
  • Synonyms
    HCG-1, PNSC1
  • Links
    NCBI Gene ID: 5412
    neXtProt AC: NX_O95164
    UniProt: O95164

  • Chr Location
    13q12.3; chr13:29764371-29850617 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    10 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    1
  • GO References
    1
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    13
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000001687 Ensembl Gene Model | MGI Sequence Detail 48155 C57BL/6J ±  kb
transcript ENSMUST00000201595 Ensembl | MGI Sequence Detail 2064 Not Applicable  
polypeptide ENSMUSP00000144073 Ensembl | MGI Sequence Detail 117 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 14
    Genomic 1
    cDNA 13

    Microarray probesets 3
Other
Accession IDs
less
MGI:2141152
References
more
  • Summaries
    All 31
    Gene Ontology 1
    Phenotypes 10
  • Earliest
    J:56252 Chadwick BP, et al., Cloning, mapping and expression of UBL3, a novel ubiquitin-like gene. Gene. 1999 Jun 11;233(1-2):189-95
  • Latest
    J:324111 Liu H, et al., Ubiquitin-like protein 3 (UBL3) is required for MARCH ubiquitination of major histocompatibility complex class II and CD86. Nat Commun. 2022 Apr 11;13(1):1934
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory