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Ctdsp2 Gene Detail
Summary
  • Symbol
    Ctdsp2
  • Name
    CTD small phosphatase 2
  • Synonyms
    D10Ertd73e, OS4, SCP2
  • Feature Type
    protein coding gene
  • IDs
    MGI:1098748
    NCBI Gene: 52468
  • Alliance
    gene page
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr10:126814586-126835844 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 10, 74.35 cM
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    120 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1098748
 protein coding gene Chr10:126814586-126835844 (+)
129S1/SvImJ MGP_129S1SvImJ_G0017797
 protein coding gene Chr10:130546120-130571794 (+)
A/J MGP_AJ_G0017772
 protein coding gene Chr10:125335546-125340463 (+)
AKR/J MGP_AKRJ_G0017735
 protein coding gene Chr10:129033263-129054993 (+)
BALB/cJ MGP_BALBcJ_G0017736
 protein coding gene Chr10:125724072-125751455 (+)
C3H/HeJ MGP_C3HHeJ_G0017560
 protein coding gene Chr10:129160850-129184268 (+)
C57BL/6NJ MGP_C57BL6NJ_G0018191
 protein coding gene Chr10:134975094-134998441 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0015871
 protein coding gene Chr10:119347483-119367980 (+)
CAST/EiJ MGP_CASTEiJ_G0017120
 protein coding gene Chr10:129809506-129834042 (+)
CBA/J MGP_CBAJ_G0017529
 protein coding gene Chr10:140389414-140416189 (+)
DBA/2J MGP_DBA2J_G0017635
 protein coding gene Chr10:124409116-124431304 (+)
FVB/NJ MGP_FVBNJ_G0017630
 protein coding gene Chr10:123357208-123379368 (+)
LP/J MGP_LPJ_G0017709
 protein coding gene Chr10:131113916-131142520 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0017658
 protein coding gene Chr10:143127006-143155468 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0018231
 protein coding gene Chr10:129087544-129110683 (+)
PWK/PhJ MGP_PWKPhJ_G0016905
 protein coding gene Chr10:124597943-124620214 (+)
SPRET/EiJ MGP_SPRETEiJ_G0016697
 protein coding gene Chr10:128109143-128134904 (+)
WSB/EiJ MGP_WSBEiJ_G0017181
 protein coding gene Chr10:129309570-129327671 (+)



Homology
more
  • Human Ortholog
    CTDSP2, CTD small phosphatase 2
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    CTDSP2, CTD small phosphatase 2
  • Synonyms
    OS4, PSR2, SCP2
  • Links
    NCBI Gene ID: 10106
    neXtProt AC: NX_O14595
    UniProt: O14595

  • Chr Location
    12q14.1; chr12:57819927-57846729 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    7 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    9
  • GO References
    7
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    972
  • Tissues
    54
  • cDNA Data
    354
  • Literature Summary
    10
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 52468 NCBI Gene Model | MGI Sequence Detail 21259 C57BL/6J ±  kb
transcript NM_001113470 RefSeq | MGI Sequence Detail 4823 ZRU/MplStud  
polypeptide Q8BX07 UniProt | EBI | MGI Sequence Detail 270 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 356
    cDNA 354
    Primer pair 2

    Microarray probesets 7
Other
Accession IDs
less
MGI:2143650
References
more
  • Summaries
    All 47
    Developmental Gene Expression 10
    Gene Ontology 7
    Phenotypes 7
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:313619 Bedogni F, et al., Cell-Type-Specific Gene Expression in Developing Mouse Neocortex: Intermediate Progenitors Implicated in Axon Development. Front Mol Neurosci. 2021;14:686034
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory