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Pgk1-ps3 Pseudogene Detail
Summary
  • Symbol
    Pgk1-ps3
  • Name
    phosphoglycerate kinase 1, pseudogene 3
  • Synonyms
    Pgk-1ps3
Location &
Maps
more
  • Sequence Map
    Chr3:18618702-18619902 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 3, 5.16 cM
  • Mapping Data
    6 experiments
Strain
Comparison
more
  • SNPs within 2kb
    32 from dbSNP Build 142
  • Strain Annotations
    18
  • RFLP
    1
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_97558
 pseudogene Chr3:18618657-18620302 (+)
129S1/SvImJ MGP_129S1SvImJ_G0012051
 pseudogene Chr3:15745546-15746746 (+)
A/J MGP_AJ_G0012042
 pseudogene Chr3:15688218-15689416 (+)
AKR/J MGP_AKRJ_G0012004
 pseudogene Chr3:15779741-15780941 (+)
BALB/cJ MGP_BALBcJ_G0012019
 pseudogene Chr3:15451579-15452779 (+)
C3H/HeJ MGP_C3HHeJ_G0011897
 pseudogene Chr3:15837510-15838708 (+)
C57BL/6NJ MGP_C57BL6NJ_G0012324
 pseudogene Chr3:16785944-16787144 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0010761
 pseudogene Chr3:13828325-13829533 (+)
CAST/EiJ MGP_CASTEiJ_G0011680
 pseudogene Chr3:15777553-15778755 (+)
CBA/J MGP_CBAJ_G0011870
 pseudogene Chr3:17122784-17123982 (+)
DBA/2J MGP_DBA2J_G0011923
 pseudogene Chr3:15286073-15287271 (+)
FVB/NJ MGP_FVBNJ_G0011932
 pseudogene Chr3:14956408-14957608 (+)
LP/J MGP_LPJ_G0011999
 pseudogene Chr3:16375378-16376578 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0011934
 pseudogene Chr3:19151294-19152494 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0012332
 pseudogene Chr3:15550337-15551537 (+)
PWK/PhJ MGP_PWKPhJ_G0011527
 pseudogene Chr3:15006337-15007526 (+)
SPRET/EiJ MGP_SPRETEiJ_G0011343
 pseudogene Chr3:15391672-15392876 (+)
WSB/EiJ MGP_WSBEiJ_G0011703
 pseudogene Chr3:15623725-15624923 (+)



Homology
less
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    22
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000105280 Ensembl Gene Model | MGI Sequence Detail 1201 C57BL/6J ±  kb
transcript ENSMUST00000198338 Ensembl | MGI Sequence Detail 1201 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 2
    Genomic 1
    cDNA 1
Other
Accession IDs
less
MGD-MRK-13261, MGD-MRK-13269
References
more
  • Summaries
    All 14
    Diseases 1
    Phenotypes 2
  • Earliest
    J:9038 Adra CN, et al., The family of mouse phosphoglycerate kinase genes and pseudogenes. Somat Cell Mol Genet. 1988 Jan;14(1):69-81
  • Latest
    J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory