Gene Expression Data
Assay Details
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Assay
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Reference:
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J:65195
Stoykova A, et al., Pax6 modulates the dorsoventral patterning of the mammalian telencephalon. J Neurosci. 2000 Nov 1;20(21):8042-50
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Assay type:
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RNA in situ
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MGI Accession ID:
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MGI:7620205
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Gene symbol:
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Tbr1
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Gene name:
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T-box brain transcription factor 1
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Probe:
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Tbr1 probe
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Probe preparation:
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Antisense labelled with S35 RNA
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Results
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Specimen
1F:
embryonic day 12.5
(more  )
Specimen
1F:
(close  )
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Genetic Background:
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involves: C57BL/6J * DBA/2J
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Age:
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embryonic day 12.5
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Sex:
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Not Specified
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Type:
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section
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| Structure |
Cell Type |
Level |
Pattern |
Image |
Note |
| TS20: pallium |
neuron |
Present |
Regionally restricted |
1F
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Expression is in early postmitotic cells.
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| TS20: ventral pallium |
neuron |
Present |
Regionally restricted |
1F
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Expression is in early postmitotic cells.
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| TS20: telencephalon |
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Present |
Regionally restricted |
1F
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Expression is in cells that extend out from the neuroepithelium of the ventral pallium toward the basolateral telencephalon.
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Specimen
1F':
(close )
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Genetic Background:
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involves: C57BL/6J * DBA/2J
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Mutant Allele(s):
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Pax6Sey/Pax6Sey
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Age:
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embryonic day 12.5
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Sex:
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Not Specified
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Type:
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section
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| Structure |
Cell Type |
Level |
Pattern |
Image |
Note |
| TS20: ventral pallium |
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Present |
Regionally restricted |
1F'
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In this mutant expression is absent in the subventricular zone, submantle, and
mantle zone.
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| TS20: pallium |
neuron |
Present |
Regionally restricted |
1F'
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In this mutant expression is less affected in the postmitotic neurons of the preplate in the dorsal and lateral pallium.
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Specimen
4A:
embryonic day 18.5
(more )
Specimen
4A:
(close )
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Genetic Background:
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involves: C57BL/6J * DBA/2J
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Age:
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embryonic day 18.5
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Sex:
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Not Specified
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Type:
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section
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| Structure |
Level |
Pattern |
Image |
Note |
| TS26: neocortex |
Present |
Regionally restricted |
4A
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Expression is in postmitotic cells.
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| TS26: paleocortex |
Present |
Regionally restricted |
4A
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Expression is in postmitotic cells.
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| TS26: brain nucleus |
Present |
Regionally restricted |
4A
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Expression is in classical claustrum.
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Specimen
4B:
embryonic day 18.5
(more )
Specimen
4B:
(close )
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Genetic Background:
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involves: C57BL/6J * DBA/2J
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Age:
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embryonic day 18.5
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Sex:
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Not Specified
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Type:
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section
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| Structure |
Level |
Pattern |
Image |
Note |
| TS26: neocortex |
Present |
Regionally restricted |
4B
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Expression is in postmitotic cells.
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| TS26: paleocortex |
Present |
Regionally restricted |
4B
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Expression is in postmitotic cells.
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| TS26: piriform cortex |
Present |
Regionally restricted |
4B
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Expression is in the dense layer II.
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Specimen
4G:
(close )
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Genetic Background:
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involves: C57BL/6J * DBA/2J
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Mutant Allele(s):
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Pax6Sey/Pax6Sey
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Age:
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embryonic day 18.5
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Sex:
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Not Specified
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Type:
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section
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| Structure |
Level |
Pattern |
Image |
Note |
| TS26: telencephalon |
Present |
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4G
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Expression pattern is altered due to indistinguishable structures.
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Specimen
6E:
embryonic day 18.5
(more )
Specimen
6E:
(close )
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Genetic Background:
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involves: C57BL/6J * DBA/2J
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Age:
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embryonic day 18.5
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Sex:
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Not Specified
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Type:
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section
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Specimen
6E':
(close )
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Genetic Background:
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involves: C57BL/6J * DBA/2J
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Mutant Allele(s):
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Pax6Sey/Pax6Sey
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Age:
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embryonic day 18.5
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Sex:
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Not Specified
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Type:
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section
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Specimen
not shown WT:
embryonic day 14.5
(more )
Specimen
not shown WT:
(close )
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Genetic Background:
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involves: C57BL/6J * DBA/2J
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Age:
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embryonic day 14.5
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Sex:
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Not Specified
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Type:
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section
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| Structure |
Level |
Pattern |
Image |
Note |
| TS22: cortical plate |
Weak |
Regionally restricted |
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Expression is in the superficial zone of the forming cortical plate.
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Specimen
not shown Sey/Sey:
embryonic day 14.5; Pax6Sey/ Pax6Sey
(more )
Specimen
not shown Sey/Sey:
(close )
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Genetic Background:
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involves: C57BL/6J * DBA/2J
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Mutant Allele(s):
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Pax6Sey/Pax6Sey
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Age:
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embryonic day 14.5
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Sex:
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Not Specified
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Type:
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section
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Analysis Tools