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Gene Expression Data
Assay Details
Assay
Reference: J:69527 Lazzaro MA, et al., Cloning and characterization of the murine Imitation Switch (ISWI) genes: differential expression patterns suggest distinct developmental roles for Snf2h and Snf2l. J Neurochem. 2001 May;77(4):1145-56
Assay type: RNA in situ
MGI Accession ID: MGI:6406237
Gene symbol: Smarca1
Gene name: SNF2 related chromatin remodeling ATPase 1
Probe: Snf2l cDNA
Probe preparation: Antisense labelled with P33 RNA
Visualized with: Autoradiography
Results
Specimen 3a1: embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: embryo Weak Widespread 3a1
Specimen 3c1: embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: neocortex Present 3c1
Specimen 3d1: embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: choroid plexus Present 3d1
Specimen 3e1: embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: olfactory epithelium Present 3e1
Specimen 3f1: embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: lung Present 3f1
Specimen 4a1: postnatal day 1 (more )
Structure Level Pattern Image Note
TS27: cerebellum Weak 4a1
TS27: choroid plexus Weak 4a1
Specimen 4a2: postnatal day 1 (more )
Structure Level Pattern Image Note
TS27: hippocampus granule cell layer Weak 4a2
Specimen 4b1: postnatal day 15 (more )
Structure Level Pattern Image Note
TS28: cerebellum Purkinje cell layer Present 4b1
TS28: cerebellum internal granule cell layer Present 4b1
Specimen 4b2: postnatal day 15 (more )
Structure Level Pattern Image Note
TS28: cerebellum Purkinje cell layer Present 4b2
TS28: cerebellum internal granule cell layer Present 4b2
Specimen 4e1: postnatal day 1 (more )
Structure Level Pattern Image Note
TS27: hippocampus Weak 4e1
Specimen 4f1: postnatal day 15 (more )
Structure Level Pattern Image Note
TS28: hippocampus granule cell layer Present 4f1
TS28: hippocampus pyramidal cell layer Present 4f1
Specimen 5a: postnatal adult (more )
Structure Level Pattern Image Note
TS28: dentate gyrus Strong 5a
TS28: hippocampus Strong 5a
TS28: neocortex layer Present Regionally restricted 5a Expression is in most layers.
TS28: inferior colliculus Present 5a
TS28: pontine nucleus Present 5a
TS28: superior colliculus Present 5a
TS28: thalamic nucleus Present 5a
Specimen 5c: postnatal adult (more )
Structure Level Pattern Image Note
TS28: dentate gyrus Strong 5c
TS28: hippocampus Strong 5c
Specimen 5d: postnatal adult (more )
Structure Level Pattern Image Note
TS28: dentate gyrus granule cell layer Strong 5d
TS28: hippocampus pyramidal cell layer Strong 5d
Specimen 5f: postnatal adult (more )
Structure Level Pattern Image Note
TS28: cerebellum Purkinje cell layer Present 5f
TS28: cerebellum internal granule cell layer Present 5f
TS28: deep cerebellar nucleus Present 5f
Specimen 5g: postnatal adult (more )
Structure Level Pattern Image Note
TS28: cerebellum Purkinje cell layer Present 5g
TS28: cerebellum internal granule cell layer Present 5g
Specimen 6a: postnatal (more )
Structure Level Pattern Image Note
TS28: ovary follicle cell Strong Regionally restricted 6a Expression is in pre-ovulatory follicles.
Specimen 6c: postnatal (more )
Structure Level Pattern Image Note
TS28: ovary follicle cell Present Regionally restricted 6c Expression is in pre-ovulatory follicles.
Specimen 6d: postnatal (more )
Structure Level Pattern Image Note
TS28: oocyte Present 6d
Specimen 6f: postnatal (more )
Structure Level Pattern Image Note
TS28: corpus luteum Present 6f
Specimen 6h: postnatal (more )
Structure Level Pattern Image Note
TS28: seminiferous tubule epithelium Present 6h
TS28: spermatid Present 6h
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory