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Gene Expression Data
Assay Details
Assay
Reference: J:281371 Rom A, et al., Regulation of CHD2 expression by the Chaserr long noncoding RNA gene is essential for viability. Nat Commun. 2019 Nov 8;10(1):5092
Assay type: RT-PCR
MGI Accession ID: MGI:6384214
Gene symbol: Cdh2
Gene name: cadherin 2
Probe: Cdh2-pG, Cdh2-pH
Probe preparation: labelled with SYBR green
Assay notes: The authors stated that two heterozygotes were used interchangeably and did not specify which ones were used for this specific experiment. Both are annotated: (1810026B05Rik<em1Wei>/+ and 1810026B05Rik<em2Wei>/+. Quantitative RT-PCR. Relative expression is shown normalized to Actb expression.
Results
Image: 2a Chd2 ©

 Sample Information Bands Other Sample Information
Lane AgeStructure Size Not Specified Amount Genetic BackgroundMutant Allele(s)Sex
WT E9.5 TS15: embryo Present Not Specified; total RNA Not Specified Not Specified
Chaserr+/- E9.5 TS15: embryo Present (a) Not Specified; total RNA involves: BALB/c * C57BL/6 Chaserrem1Wei/Chaserr+Not Specified
Chaserr+/- E9.5 TS15: embryo Present (a) Not Specified; total RNA involves: BALB/c * C57BL/6 Chaserrem2Wei/Chaserr+Not Specified
WT E10.5 TS17: embryo Present Not Specified; total RNA Not Specified Not Specified
Chaserr+/- E10.5 TS17: embryo Present (a) Not Specified; total RNA involves: BALB/c * C57BL/6 Chaserrem1Wei/Chaserr+Not Specified
Chaserr+/- E10.5 TS17: embryo Present (a) Not Specified; total RNA involves: BALB/c * C57BL/6 Chaserrem2Wei/Chaserr+Not Specified
WT E13.5 TS21: embryo Present Not Specified; total RNA Not Specified Not Specified
Chaserr+/- E13.5 TS21: embryo Present (a) Not Specified; total RNA involves: BALB/c * C57BL/6 Chaserrem1Wei/Chaserr+Not Specified
Chaserr+/- E13.5 TS21: embryo Present (a) Not Specified; total RNA involves: BALB/c * C57BL/6 Chaserrem2Wei/Chaserr+Not Specified
mEFs Cultured cells: no data stored
Brain WT P adult TS28: brain Present Not Specified; total RNA Not Specified Not Specified
Brain Chaserr+/- P adult TS28: brain Present (a) Not Specified; total RNA involves: BALB/c * C57BL/6 Chaserrem1Wei/Chaserr+Not Specified
Brain Chaserr+/- P adult TS28: brain Present (a) Not Specified; total RNA involves: BALB/c * C57BL/6 Chaserrem2Wei/Chaserr+Not Specified
Liver WT P adult TS28: liver Present Not Specified; total RNA Not Specified Not Specified
Liver Chaserr+/- P adult TS28: liver Present (a) Not Specified; total RNA involves: BALB/c * C57BL/6 Chaserrem1Wei/Chaserr+Not Specified
Liver Chaserr+/- P adult TS28: liver Present (a) Not Specified; total RNA involves: BALB/c * C57BL/6 Chaserrem2Wei/Chaserr+Not Specified
Spleen WT P adult TS28: spleen Present Not Specified; total RNA Not Specified Not Specified
Spleen Chaserr+/- P adult TS28: spleen Present (a) Not Specified; total RNA involves: BALB/c * C57BL/6 Chaserrem1Wei/Chaserr+Not Specified
Spleen Chaserr+/- P adult TS28: spleen Present (a) Not Specified; total RNA involves: BALB/c * C57BL/6 Chaserrem2Wei/Chaserr+Not Specified
Thymus WT P adult TS28: thymus Present Not Specified; total RNA Not Specified Not Specified
Thymus Chaserr+/- P adult TS28: thymus Present (a) Not Specified; total RNA involves: BALB/c * C57BL/6 Chaserrem1Wei/Chaserr+Not Specified
Thymus Chaserr+/- P adult TS28: thymus Present (a) Not Specified; total RNA involves: BALB/c * C57BL/6 Chaserrem2Wei/Chaserr+Not Specified
Notes:
(a) Expression is upregulated 1.5-fold in the heterozygote.
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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05/07/2024
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