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Gene Expression Data
Assay Details
Assay
Reference: J:41061 Zannini M, et al., TTF-2, a new forkhead protein, shows a temporal expression in the developing thyroid which is consistent with a role in controlling the onset of differentiation. EMBO J. 1997 Jun 2;16(11):3185-97
Assay type: RNA in situ
MGI Accession ID: MGI:6281179
Gene symbol: Foxe1
Gene name: forkhead box E1
Probe: TTF-2 cDNA
Probe preparation: Antisense labelled with S35 RNA
Visualized with: Autoradiography
Assay notes: Transcripts were hydrolyzed by alkaline hydrolysis to an average length of 150 nucleotides.
Results
Specimen 5A/A': embryonic day 8.5 (more )
Structure Level Pattern Image Note
TS13: foregut diverticulum endoderm Present 5A , 5A'

Specimen 5B/B': embryonic day 9.2 (more )
Structure Level Pattern Image Note
TS14: foregut epithelium Present Regionally restricted 5B , 5B' Expression is in the anterior foregut.
TS14: stomatodeum Present Regionally restricted 5B , 5B' Expression is posterior.
TS14: pharyngeal region Present Regionally restricted 5B' , 5B Expression is in the pharyngeal membrane.

Specimen 5C/C': embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: branchial pouch endoderm Present Regionally restricted 5C' , 5C Expression is along the endoderm of the foregut lining the visceral pouch of the branchial arches.
TS17: foregut Present Regionally restricted 5C' , 5C Expression is along the endoderm of the foregut lining the visceral pouch of the branchial arches.
TS17: gut endoderm Present Regionally restricted 5C' , 5C Expression is along the endoderm of the foregut lining the visceral pouch of the branchial arches.
TS17: stomatodeum Present Regionally restricted 5C , 5C' Expression is in the dorsal ectoderm.
TS17: nasal process ectoderm Absent 5C , 5C' Absent in the rostral ectoderm that lines the nasal process.
TS17: olfactory placode Absent 5C' , 5C Absent in the rostral ectoderm that lines the olfactory placode.

Specimen 5D/D': embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: branchial pouch endoderm Present Regionally restricted 5D' , 5D Expression is along the endoderm of the foregut lining the visceral pouch of the branchial arches.
TS17: foregut Present Regionally restricted 5D' , 5D Expression is along the endoderm of the foregut lining the visceral pouch of the branchial arches.
TS17: gut endoderm Present Regionally restricted 5D' , 5D Expression is along the endoderm of the foregut lining the visceral pouch of the branchial arches.
TS17: stomatodeum Present Regionally restricted 5D' , 5D Expression is in the dorsal ectoderm.
TS17: Rathke's pouch Present 5D' , 5D
TS17: thyroid primordium Present 5D' , 5D
TS17: nasal process ectoderm Absent 5D' , 5D Absent in the rostral ectoderm that lines the nasal process.
TS17: olfactory placode Absent 5D , 5D' Absent in the rostral ectoderm that lines the olfactory placode.

Specimen 5E/E': embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: stomatodeum Present Regionally restricted 5E , 5E' Expression is in the dorsal ectoderm.
TS17: Rathke's pouch Present 5E , 5E'
TS17: thyroid primordium Present 5E , 5E'

Specimen 5F/F': embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: branchial pouch endoderm Present Regionally restricted 5F , 5F' Expression is along the endoderm of the foregut lining the visceral pouch of the branchial arches.
TS17: foregut Present Regionally restricted 5F , 5F' Expression is along the endoderm of the foregut lining the visceral pouch of the branchial arches.
TS17: gut endoderm Present Regionally restricted 5F , 5F' Expression is along the endoderm of the foregut lining the visceral pouch of the branchial arches.

Specimen 5G/G': embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: stomatodeum Present Regionally restricted 5G , 5G' Expression is in the dorsal ectoderm.
TS17: nasal process ectoderm Absent 5G , 5G' Absent in the rostral ectoderm that lines the nasal process.
TS17: olfactory placode Absent 5G' , 5G Absent in the rostral ectoderm that lines the olfactory placode.

Specimen 6F: embryonic day 8.5 (more )
Structure Level Pattern Image Note
TS13: foregut diverticulum endoderm Present 6F
TS13: thyroid primordium Present 6F

Specimen 6G: embryonic day 8.5 (more )
Structure Level Pattern Image Note
TS13: foregut diverticulum endoderm Present 6G
TS13: thyroid primordium Present 6G

Specimen 6H: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: thyroid primordium Present 6H' , 6H

Specimen 6I: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: thyroid primordium Present 6I' , 6I

Specimen 6J: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: thyroid gland Present 6J , 6J'

Specimen 7F: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: stomatodeum ectoderm Present Regionally restricted 7F' , 7F Expression is in cells fated to become the adenohypophysis in the inner stomatodeum.

Specimen 7G: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: Rathke's pouch Present 7G , 7G'

Specimen 7H: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: Rathke's pouch Present 7H' , 7H

Specimen 7I: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: Rathke's pouch Present 7I' , 7I

Specimen 7J: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: adenohypophysis Absent 7J , 7J'

Specimen 8C: embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: thyroid gland Present 8C' , 8C

Specimen 8D: embryonic day 15.0 (more )
Structure Level Pattern Image Note
TS23: thyroid gland Absent 8D' , 8D


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
05/07/2024
MGI 6.23
The Jackson Laboratory