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Gene Expression Data
Assay Details
Assay
Reference: J:43984 Garel S, et al., Family of Ebf/Olf-1-related genes potentially involved in neuronal differentiation and regional specification in the central nervous system. Dev Dyn. 1997 Nov;210(3):191-205
Assay type: RNA in situ
MGI Accession ID: MGI:5912321
Gene symbol: Ebf2
Gene name: early B cell factor 2
Probe: Ebf2 cDNA5
Probe preparation: Antisense labelled with S35 RNA
Results
Specimen 3F: embryonic day 11.0 (more )
Structure Level Pattern Image Note
TS18: neural tube mantle layer Present Regionally restricted 3F Expression is in the subventricular mantle layer.

Specimen 3J: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: neural tube mantle layer Present Regionally restricted 3J Expression is in the subventricular mantle layer.

Specimen 4E: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: hindbrain mantle layer Present Regionally restricted 4E Expression is in the subventricular mantle layer.
TS19: hindbrain ventricular layer Present Regionally restricted 4E Expression is in the rostral-most hindbrain.
TS19: midbrain-hindbrain junction Absent 4E

Specimen 4H: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: hindbrain mantle layer Present Regionally restricted 4H Expression is in the subventricular mantle layer.
TS19: hindbrain ventricular layer Present Single cells 4H Expression is in a few cells.

Specimen 4L: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: pons Present Regionally restricted 4L Expression is in the superior olive.
TS22: cerebellum gray matter Present Regionally restricted 4L Expression is in the cortical transitory zone.
TS22: deep cerebellar nucleus Weak Regionally restricted 4L

Specimen 5B: embryonic day 13.5 (more )
Note: Lateral section.
Structure Level Pattern Image Note
TS21: midbrain mantle layer Present 5B
TS21: posterior commissure Present 5B
TS21: thalamus Present Regionally restricted 5B Expression is in the dorsal thalamus and is absent in the ventral thalamus.
TS21: forebrain-midbrain boundary region Strong Regionally restricted 5B Expression is in the precommissural zone.
TS21: cerebral cortex Present Regionally restricted 5B Expression is in the external layer.

Specimen 5E: embryonic day 13.5 (more )
Note: Medial section.
Structure Level Pattern Image Note
TS21: mammillary area Present 5E
TS21: forebrain Present Regionally restricted 5E Expression is in the eminentia thalami.
TS21: cerebral cortex Weak Regionally restricted 5E Expression is in the external layer.
TS21: zona limitans intrathalamica Weak 5E

Specimen not shown E9.5: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: future midbrain lateral wall Present Single cells Expression is in a few cells in the alar plate.
TS15: diencephalon Present Regionally restricted Expression is in the alar and basal plates of the caudal part of the diencephalon.

Specimen not shown E10: embryonic day 10.0 (more )
Structure Level Pattern Image Note
TS16: future midbrain Present Graded There is a rostrocaudal decreasing gradient of expression.

Specimen not shown E12.5: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: hypothalamus Present Regionally restricted Expression is absent in a longitudinal band at the level of the hypothalamic cell cord.
TS20: telencephalon Present Regionally restricted Expression is in a thin external layer of the septum.

Specimen not shown E13.5: embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: midbrain Present Regionally restricted From E13.5 there is a progressive down-regulation of expression in the basal plate, while expression was maintained in the tectum.
TS21: main olfactory bulb Present
TS21: retina Present

Specimen not shown E14.5: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: corpus striatum Present
TS22: hippocampus Present
TS22: pretectum Present
TS22: cerebral cortex Present Regionally restricted Expression is in the external layer.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
05/14/2024
MGI 6.23
The Jackson Laboratory