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Gm42109 Gene Detail
Summary
  • Symbol
    Gm42109
  • Name
    predicted gene, 42109
  • Synonyms
    Gm43448
Location &
Maps
more
  • Sequence Map
    Chr5:90722004-90732854 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 5, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    74 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5624994
 lncRNA gene Chr5:90701058-90736936 (-)
129S1/SvImJ MGP_129S1SvImJ_G0015607
 unclassified non-coding RNA gene Chr5:91627954-91666769 (-)
A/J MGP_AJ_G0015583
 unclassified non-coding RNA gene Chr5:88014188-88050978 (-)
AKR/J MGP_AKRJ_G0015547
 unclassified non-coding RNA gene Chr5:90879392-90915550 (-)
BALB/cJ MGP_BALBcJ_G0015545
 unclassified non-coding RNA gene Chr5:88900326-88937813 (-)
C3H/HeJ MGP_C3HHeJ_G0015367
 unclassified non-coding RNA gene Chr5:91286578-91324114 (-)
C57BL/6NJ MGP_C57BL6NJ_G0015999
 unclassified non-coding RNA gene Chr5:95291728-95332253 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0013734
 unclassified non-coding RNA gene Chr5:83722710-83758125 (-)
CAST/EiJ MGP_CASTEiJ_G0014923
 unclassified non-coding RNA gene Chr5:90655782-90694057 (-)
CBA/J MGP_CBAJ_G0015348
 unclassified non-coding RNA gene Chr5:98551981-98597620 (-)
DBA/2J MGP_DBA2J_G0015442
 unclassified non-coding RNA gene Chr5:88086895-88123278 (-)
FVB/NJ MGP_FVBNJ_G0015449
 unclassified non-coding RNA gene Chr5:86944064-86982968 (-)
LP/J MGP_LPJ_G0015523
 unclassified non-coding RNA gene Chr5:92007727-92044650 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0015472
 unclassified non-coding RNA gene Chr5:103548042-103585964 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0016041
 unclassified non-coding RNA gene Chr5:90404935-90443045 (-)
PWK/PhJ MGP_PWKPhJ_G0014708
 unclassified non-coding RNA gene Chr5:87142136-87180521 (-)
SPRET/EiJ MGP_SPRETEiJ_G0014496
 unclassified non-coding RNA gene Chr5:89806537-89847419 (-)
WSB/EiJ MGP_WSBEiJ_G0015027
 unclassified non-coding RNA gene Chr5:90864660-90901775 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
  • All Mutations and Alleles
    4
  • Chemically induced (other)
    2
  • Radiation induced
    1
  • Spontaneous
    1
  • Genomic Mutations
    4 involving Gm42109
  • Find Mice (IMSR)
    0 strains or lines available
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    23
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 105246912 NCBI Gene Model | MGI Sequence Detail 10851 C57BL/6J ±  kb
transcript XR_880417 RefSeq | MGI Sequence Detail 1615 C57BL/6J  
For the selected sequence
Other
Accession IDs
less
MGI:5663585
References
more
  • Summaries
    All 11
    Phenotypes 6
  • Earliest
    J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
  • Latest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/09/2024
MGI 6.23 		The Jackson Laboratory