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Gm38412 Gene Detail
Summary
  • Symbol
    Gm38412
  • Name
    predicted gene, 38412
  • Synonyms
    Gm43257
  • Feature Type
    lncRNA gene
  • IDs
    MGI:5621297
    NCBI Gene: 329730
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr3:104318292-104324851 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 3, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    126 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5621297
 lncRNA gene Chr3:104316477-104324851 (+)
129S1/SvImJ MGP_129S1SvImJ_G0003808
 antisense lncRNA gene Chr3:105711382-105721102 (+)
A/J MGP_AJ_G0003788
 antisense lncRNA gene Chr3:102351578-102364194 (+)
AKR/J MGP_AKRJ_G0003764
 antisense lncRNA gene Chr3:104866628-104876278 (+)
BALB/cJ MGP_BALBcJ_G0003775
 antisense lncRNA gene Chr3:102129160-102137910 (+)
C3H/HeJ MGP_C3HHeJ_G0003722
 antisense lncRNA gene Chr3:105234658-105243001 (+)
C57BL/6NJ MGP_C57BL6NJ_G0003917
 antisense lncRNA gene Chr3:109642822-109653324 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0003420
 antisense lncRNA gene Chr3:98477802-98486221 (+)
CAST/EiJ MGP_CASTEiJ_G0003686
 antisense lncRNA gene Chr3:104356924-104366175 (+)
CBA/J MGP_CBAJ_G0003717
 antisense lncRNA gene Chr3:113391460-113402799 (+)
DBA/2J MGP_DBA2J_G0003728
 antisense lncRNA gene Chr3:101602616-101610565 (+)
FVB/NJ MGP_FVBNJ_G0003749
 antisense lncRNA gene Chr3:99532233-99540628 (+)
LP/J MGP_LPJ_G0003810
 antisense lncRNA gene Chr3:107066102-107074909 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0003736
 antisense lncRNA gene Chr3:119529740-119539045 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0003918
 antisense lncRNA gene Chr3:104424150-104433377 (+)
PWK/PhJ MGP_PWKPhJ_G0003642
 antisense lncRNA gene Chr3:101387755-101396385 (+)
SPRET/EiJ MGP_SPRETEiJ_G0003586
 antisense lncRNA gene Chr3:102470088-102482128 (+)
WSB/EiJ MGP_WSBEiJ_G0003722
 antisense lncRNA gene Chr3:104985875-104995473 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    1
Sequences &
Gene Models
less
  • All Sequences
    23
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 329730 NCBI Gene Model | MGI Sequence Detail 6560 C57BL/6J ±  kb
transcript NR_177245 RefSeq | MGI Sequence Detail 2080 ZRU/MplStud  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1
Other
Accession IDs
less
MGI:5663394
References
more
  • Summaries
    All 8
    Phenotypes 2
  • Earliest
    J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
  • Latest
    J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory