About   Help   FAQ
Gene Expression Data
Assay Details
Assay
Reference: J:79521 Failli V, et al., Expression of the LIM-homeodomain gene Lmx1a (dreher) during development of the mouse nervous system. Mech Dev. 2002 Oct;118(1-2):225
Assay type: RNA in situ
MGI Accession ID: MGI:5605173
Gene symbol: Lmx1a
Gene name: LIM homeobox transcription factor 1 alpha
Probe: Lmx1a cDNA2
Probe preparation: Antisense labelled with digoxigenin RNA
Results
Specimen 1A left: embryonic day 8.5 (more )
Structure Level Pattern Image Note
TS13: neural fold Present 1A left
TS13: otic placode Present 1A left
TS13: neural tube roof plate Present Regionally restricted 1A left Expression is along the entire antero-posterior axis except at the caudal tip of the tailbud.

Specimen 1A right: embryonic day 8.5 (more )
Structure Level Pattern Image Note
TS13: neural fold Present 1A right
TS13: otic placode Present 1A right
TS13: neural tube roof plate Present Regionally restricted 1A right Expression is along the entire antero-posterior axis except at the caudal tip of the tailbud.

Specimen 1B: embryonic day 9.5 (more )
Note: (C,D) High magnifications of the otic vesicle and the roof plate of the neural tube.
Structure Level Pattern Image Note
TS15: otocyst Present 1C , 1B
TS15: neural tube roof plate Present Regionally restricted 1D , 1B Expression is along the entire antero-posterior axis except at the caudal tip of the tailbud.
TS15: limb Absent 1B

Specimen 1E: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: neural tube roof plate Present Regionally restricted 1E Expression is along the entire antero-posterior axis except at the caudal tip of the tailbud.

Specimen 1F: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: neural tube roof plate Present Regionally restricted 1F Expression is along the entire antero-posterior axis except at the caudal tip of the tailbud.
TS17: gonad primordium Absent 1F
TS17: limb Absent 1F

Specimen 1G: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: neural tube roof plate Present Regionally restricted 1G Expression is along the entire antero-posterior axis except at the caudal tip of the tailbud.

Specimen 1H: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: neural tube roof plate Present Regionally restricted 1H Expression is along the entire antero-posterior axis except at the caudal tip of the tailbud.
TS17: notochord Present Regionally restricted 1H Expression is at the caudal part.

Specimen 1I: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: telencephalon Strong Regionally restricted 1I Expression is in the roof plate and in the cortical hem.
TS20: choroid plexus Strong 1I
TS20: diencephalon roof plate Present 1I
TS20: hypothalamus Present Regionally restricted 1I Expression is in the basal plate.

Specimen 1J: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: telencephalon Strong Regionally restricted 1J Expression is in the roof plate and in the cortical hem.
TS20: choroid plexus Strong 1J

Specimen 1K: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: telencephalon Strong Regionally restricted 1K Expression is in the roof plate and in the cortical hem.
TS20: choroid plexus Strong 1K

Specimen 1L: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: metencephalon Present Regionally restricted 1L Expression is at the mes-metencephalic junction. Absent in the optic tectum.
TS22: midbrain Present Regionally restricted 1L Expression is at the mes-metencephalic junction. Absent in the optic tectum.
TS22: cerebellum Present 1L

Specimen 1M: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: metencephalon Present Regionally restricted 1M Expression is at the mes-metencephalic junction. Absent in the optic tectum.
TS24: midbrain Present Regionally restricted 1M Expression is at the mes-metencephalic junction. Absent in the optic tectum.
TS24: cerebellum Present 1M

Specimen 1N: embryonic day 16.5 (more )
Note: Hemisection.
Structure Level Pattern Image Note
TS24: hypothalamus Present Regionally restricted 1N Expression is in the basal plate.
TS24: midbrain floor plate Present 1N
TS24: telencephalon Absent 1N

Specimen 2A: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: neural tube roof plate Present Regionally restricted 2A Expression is along the entire antero-posterior axis except at the caudal tip of the tailbud.

Specimen 2B: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: neural tube roof plate Present Regionally restricted 2B Expression is along the entire antero-posterior axis except at the caudal tip of the tailbud.

Specimen 2C: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: neural tube roof plate Present Regionally restricted 2C Expression is along the entire antero-posterior axis except at the caudal tip of the tailbud.
TS17: notochord Present Regionally restricted 2C Expression is at the caudal part.

Specimen 2D: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: neural tube roof plate Present Regionally restricted 2D Expression is along the entire antero-posterior axis except at the caudal tip of the tailbud (shown).
TS17: notochord Present Regionally restricted 2D Expression is at the caudal part.

Specimen 2E: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: neural tube roof plate Present Regionally restricted 2E Expression is along the entire antero-posterior axis except at the caudal tip of the tailbud (shown).
TS17: notochord Present Regionally restricted 2E Expression is at the caudal part.

Specimen 2F: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: telencephalon Present Regionally restricted 2F

Specimen 2G: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: otocyst Present 2G

Specimen 2H: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: telencephalon Strong Regionally restricted 2H Expression is in the roof plate and in the cortical hem.
TS20: choroid plexus Strong 2H

Specimen 2I: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: hypothalamus Present Regionally restricted 2I ) Expression is in the basal plate.

Specimen 2J: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: diencephalon roof plate Present Regionally restricted 2J

Specimen 2K: embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: choroid plexus Present 2K Expression is in the mesencephalic choroid plexus.

Specimen 2L: embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: cerebellum Present Regionally restricted 2L Expression is in the deep cerebellar nuclei.

Specimen 2M: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: choroid plexus Present 2M Expression is in the mesencephalic choroid plexus.
TS22: cerebellum Present 2M

Specimen 2N: postnatal adult (more )
Structure Level Pattern Image Note
TS28: dentate gyrus Weak 2N
TS28: hippocampus Weak 2N

Specimen 2O: embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: choroid plexus Present 2O
TS21: telencephalon Present Regionally restricted 2O Expression is in the cortical hem.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support.
last database update
05/14/2024
MGI 6.23
The Jackson Laboratory