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Gene Expression Data
Assay Details
Assay
Reference: J:88922 Ormestad M, et al., Differences in the embryonic expression patterns of mouse Foxf1 and -2 match their distinct mutant phenotypes. Dev Dyn. 2004 Feb;229(2):328-33
Assay type: RNA in situ
MGI Accession ID: MGI:5543631
Gene symbol: Foxf2
Gene name: forkhead box F2
Probe: Foxf2 cDNA2
Probe preparation: Antisense labelled with digoxigenin RNA
Results
Specimen 1a: embryonic day 8.5 (more )
Structure Level Pattern Image Note
TS13: allantois Present 1a
TS13: lateral plate mesoderm Present 1a
TS13: primitive streak Present Regionally restricted 1a Expressed in the posterior primitive streak.

Specimen 1b: embryonic day 8.5 (more )
Structure Level Pattern Image Note
TS13: allantois Present 1b
TS13: lateral plate mesoderm Present 1b
TS13: primitive streak Present Regionally restricted 1b Expressed in the posterior primitive streak.

Specimen 1c: embryonic day 8.5 (more )
Note: Embedded in polyacrylamide.
Structure Level Pattern Image Note
TS13: splanchnopleure Present Regionally restricted 1c Expressed in the splanchnic mesoderm of the hindgut but not around the foregut.

Specimen 1d: embryonic day 8.5 (more )
Note: Embedded in polyacrylamide.
Structure Level Pattern Image Note
TS13: splanchnopleure Present Regionally restricted 1d Expressed in the splanchnic mesoderm of the hindgut.
TS13: somatopleure Absent 1d

Specimen 2a right: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: allantois Trace 2a right Very weak expression.
TS15: yolk sac Trace 2a right Very weak expression.
TS15: trunk mesenchyme Ambiguous 2a right Hardly detetable in the lateral plate mesoderm.
TS15: head mesenchyme Strong Regionally restricted 2a right Expressed in the mesenchyme surrounding Rathke's pouch and next to the oropharynx and stomodeum.
TS15: head mesenchyme derived from neural crest Strong Regionally restricted 2a right Expressed in the mesenchyme surrounding Rathke's pouch.

Specimen 2b: embryonic day 9.5 (more )
Note: Embedded in polyacrylamide.
Structure Level Pattern Image Note
TS15: head mesenchyme Present Regionally restricted 2b Expressed in mesenchyme between Rathke's pouch and the optic vesicles that evaginate from diencephalon.

Specimen 2c: embryonic day 9.5 (more )
Note: Embedded in polyacrylamide.
Structure Level Pattern Image Note
TS15: 1st branchial arch mandibular component mesenchyme Present 2c

Specimen 2d: embryonic day 9.5 (more )
Note: Embedded in polyacrylamide.
Structure Level Pattern Image Note
TS15: mesenchyme derived from splanchnopleure Present Regionally restricted 2d Expressed in splanchnic mesoderm around the foregut.
TS15: foregut mesenchyme Present 2d

Specimen 2e: embryonic day 9.5 (more )
Note: Embedded in polyacrylamide.
Structure Level Pattern Image Note
TS15: mesenchyme derived from splanchnopleure Present Regionally restricted 2e Expressed in splanchnic mesoderm of hindgut.
TS15: hindgut diverticulum mesenchyme Present 2e

Specimen 2f: embryonic day 9.5 (more )
Note: Embedded in polyacrylamide.
Structure Level Pattern Image Note
TS15: mesenchyme derived from splanchnopleure Present Regionally restricted 2f Higher expression in splanchnic mesoderm of hindgut than in mid- or foregut.
TS15: foregut mesenchyme Present 2f
TS15: hindgut diverticulum mesenchyme Present 2f
TS15: midgut mesenchyme Present 2f

Specimen 2g: embryonic day 9.5 (more )
Note: Embedded in polyacrylamide.
Structure Level Pattern Image Note
TS15: hindgut diverticulum mesenchyme Present 2g

Specimen 3a: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: sclerotome Present Regionally restricted 3a Expressed in the caudal part.
TS19: forelimb bud Present Spotted 3a Expressed as central dots.
TS19: hindlimb bud Present Spotted 3a Expressed as central dots.

Specimen 3b: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: blood vessel Present Regionally restricted 3b Expressed in the vasculature of the head.
TS19: head Present Regionally restricted 3b Expressed in the vasculature of the head.

Specimen 3c: embryonic day 10.5 (more )
Note: Embedded in polyacrylamide.
Structure Level Pattern Image Note
TS17: migrating neural crest Present Regionally restricted 3c Expressed in neural crest cells surrounding the neuroectoderm.

Specimen 3d: embryonic day 10.5 (more )
Note: Embedded in polyacrylamide.
Structure Level Pattern Image Note
TS17: migrating neural crest Present Regionally restricted 3d Expressed in neural crest cells surrounding the entire brain, including the telencephalic vesicles. Expression is most prominent in the areas around the optic stalks and Rathke's pouch and blood vessels of the hindbrain.
TS17: blood vessel Present Regionally restricted 3d Expressed in the vasculature of the hindbrain.
TS17: hindbrain Present Regionally restricted 3d Expressed in the vasculature of the hindbrain.
TS17: trigeminal ganglion Absent 3d

Specimen 3e: embryonic day 10.5 (more )
Note: Embedded in polyacrylamide.
Structure Level Pattern Image Note
TS17: migrating neural crest Present Regionally restricted 3e Expressed in neural crest cells migrating anteriorly along the edges.
TS17: sclerotome Present 3e

Specimen 3f: embryonic day 10.5 (more )
Note: Embedded in polyacrylamide.
Structure Level Pattern Image Note
TS17: head mesenchyme Present Regionally restricted 3f Expressed in the mesenchyme between Rathke's pouch and the optic stalk.

Specimen 3g: embryonic day 10.5 (more )
Note: Embedded in polyacrylamide.
Structure Level Pattern Image Note
TS17: 1st branchial arch mandibular component mesenchyme Present Regionally restricted 3g Expressed in the mesenchyme immediately underlying the epithelium.

Specimen 3h: embryonic day 10.5 (more )
Note: Embedded in polyacrylamide.
Structure Level Pattern Image Note
TS17: 1st branchial arch mandibular component mesenchyme Present Regionally restricted 3h Expressed in the mesenchyme immediately underlying the epithelium.
TS17: nasal process mesenchyme Present Regionally restricted 3h Expressed in the mesenchyme immediately underlying the epithelium.

Specimen 3i: embryonic day 10.5 (more )
Note: Embedded in polyacrylamide.
Structure Level Pattern Image Note
TS17: trunk mesenchyme Present Regionally restricted 3i Expressed in the ventral foregut splanchnic mesoderm, on either side of the laryngotracheal groove.

Specimen 3j: embryonic day 10.5 (more )
Note: Embedded in polyacrylamide.
Structure Level Pattern Image Note
TS17: sclerotome Present 3j
TS17: lung mesenchyme Weak 3j

Specimen 3k: embryonic day 10.5 (more )
Note: Embedded in polyacrylamide.
Structure Level Pattern Image Note
TS17: hindgut mesenchyme Strong 3k

Specimen 4a: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: digit mesenchyme Present Regionally restricted 4a Expressed as stripes along the mesenchymal condensations of the forming digits.
TS20: genital tubercle Present 4a
TS20: gut Present 4a
TS20: spinal cord vascular element Present 4a
TS20: oral region Present Regionally restricted 4a Expressed around the oral cavity.
TS20: sclerotome Weak Regionally restricted 4a Expressed as a segmented pattern with the periodicity of somites, in the posterior part of the embryo.
TS20: blood vessel Present Regionally restricted 4a Expressed in the vasculature of the brain and spinal cord.

Specimen 4b: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: digit mesenchyme Present Regionally restricted 4b Expressed as stripes along the mesenchymal condensations of the forming digits.
TS20: genital tubercle Present 4b
TS20: gut Present 4b
TS20: spinal cord vascular element Present 4b
TS20: oral region Present Regionally restricted 4b Expressed around the oral cavity.
TS20: sclerotome Present Regionally restricted 4b Expression narrows anteriorly.
TS20: migrating neural crest Weak Regionally restricted 4b Expressed as a segmented pattern with the periodicity of somites, in the posterior part of the embryo.
TS20: blood vessel Present Regionally restricted 4b Expressed in the vasculature of the brain and spinal cord.

Specimen 4c: embryonic day 12.5 (more )
Note: Embedded in polyacrylamide.
Structure Level Pattern Image Note
TS20: perioptic mesenchyme Present Clusters 4c
TS20: migrating neural crest Present Clusters 4c Expressed in the neural crest cells around the eyes, cochleas, and spinal cord.

Specimen 4d: embryonic day 12.5 (more )
Note: Embedded in polyacrylamide.
Structure Level Pattern Image Note
TS20: perioptic mesenchyme Present 4d

Specimen 4e: embryonic day 12.5 (more )
Note: Embedded in polyacrylamide.
Structure Level Pattern Image Note
TS20: sclerotome Present Regionally restricted 4e Expressed in the central part. Retained only in primordia of the intervertebral discs.

Specimen 4f: embryonic day 12.5 (more )
Note: Embedded in polyacrylamide.
Structure Level Pattern Image Note
TS20: sclerotome Present Regionally restricted 4f Expressed in the central part. Retained only in primordia of the intervertebral discs.

Specimen 4g: embryonic day 12.5 (more )
Note: Embedded in polyacrylamide.
Structure Level Pattern Image Note
TS20: gut mesenchyme Present Graded 4g Expressed in the inner mesenchyme, closest to the epithelium. High in the central mesenchyme adjacent to the epithelium and vanishing in the periphery.

Specimen 4h: embryonic day 12.5 (more )
Note: Embedded in polyacrylamide.
Structure Level Pattern Image Note
TS20: genital tubercle Present Regionally restricted 4h Expression is strongest in the mesenchyme underlying the surface ectoderm.

Specimen 4i: embryonic day 12.5 (more )
Note: Embedded in polyacrylamide.
Structure Level Pattern Image Note
TS20: rib pre-cartilage condensation Present Regionally restricted 4i Expressed in the cap area of uncondensed mesenchyme at the ventral end.

Specimen 4j: embryonic day 12.5 (more )
Note: Embedded in polyacrylamide.
Structure Level Pattern Image Note
TS20: rib pre-cartilage condensation Present Regionally restricted 4j Expressed in the cap area of uncondensed mesenchyme at the ventral end.

Specimen 4k: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: forelimb digit 2 Present Regionally restricted 4k Expressed in the center of the digit primordia.
TS20: forelimb digit 3 Present Regionally restricted 4k Expressed in the center of the digit primordia.
TS20: forelimb digit 4 Present Regionally restricted 4k Expressed in the center of the digit primordia.

Specimen 4l: embryonic day 12.5 (more )
Note: Embedded in polyacrylamide.
Structure Level Pattern Image Note
TS20: forelimb digit 2 mesenchyme Present Regionally restricted 4l Expressed in the mesenchyme immediately underneath the dorsal surface ectoderm.
TS20: forelimb digit 3 mesenchyme Present Regionally restricted 4l Expressed in the mesenchyme immediately underneath the dorsal surface ectoderm.
TS20: forelimb digit 4 mesenchyme Present Regionally restricted 4l Expressed in the mesenchyme immediately underneath the dorsal surface ectoderm.

Specimen 4m: embryonic day 12.5 (more )
Note: Embedded in polyacrylamide.
Structure Level Pattern Image Note
TS20: forelimb digit 2 mesenchyme Present Regionally restricted 4m Expressed in the mesenchyme immediately underneath the dorsal surface ectoderm.
TS20: forelimb digit 3 mesenchyme Present Regionally restricted 4m Expressed in the mesenchyme immediately underneath the dorsal surface ectoderm.
TS20: forelimb digit 4 mesenchyme Present Regionally restricted 4m Expressed in the mesenchyme immediately underneath the dorsal surface ectoderm.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
05/14/2024
MGI 6.23
The Jackson Laboratory