Slc6a13 RNA in situ Gene Expression Assay

Gene Expression Data
Assay Details

Assay

Reference:	J:171409 GUDMAP Consortium, GUDMAP: the GenitoUrinary Development Molecular Anatomy Project. www.gudmap.org. 2004;
Assay type:	RNA in situ
MGI Accession ID:	MGI:5541768
Gene symbol:	Slc6a13
Gene name:	solute carrier family 6 (neurotransmitter transporter, GABA), member 13

Probe:	RIKEN clone C730037J22 subclone
Probe preparation:	Antisense labelled with digoxigenin RNA
Visualized with:	Alkaline phosphatase

Results

GUDMAP:9168 ©

Specimen GUDMAP:9168: embryonic day 15.5 (more

)
Note: Labeling was visualized using BM purple.

Structure	Level	Pattern	Image	Note
TS23: urinary system	Present	Regionally restricted	GUDMAP:9168
TS23: metanephros	Present	Regionally restricted	GUDMAP:9168
TS23: renal cortex	Present	Regionally restricted	GUDMAP:9168
TS23: cortical renal tubule	Present	Regionally restricted	GUDMAP:9168	graded expression; strong expression in subset of tubules. Expression absent from a small subset of tubules. Graded expression strength with weaker expression in early proximal tubules of maturing nephrons
TS23: cortical early proximal tubule	Present		GUDMAP:9168	expression detected in maturing nephrons. Weak expression in the segment 1 of early proximal tubule and moderate expression in a subset of early proximal. Uncertain if expression is present in tubules of capillary loop stage nephrons
TS23: cortical early distal tubule	Present	Regionally restricted	GUDMAP:9168	moderate expression early distal tubules of maturing nephrons. Uncertain if expression is present in tubules of capillary loop stage nephrons
TS23: renal medulla	Present	Regionally restricted	GUDMAP:9168
TS23: immature loop of Henle	Present	Regionally restricted	GUDMAP:9168	expression absent from a subset of immature loop of Henle in medulla and strong expression in a subset of immature loop of Henle
TS23: maturing nephron	Present	Regionally restricted	GUDMAP:9168	graded expression
TS23: late tubule	Present	Regionally restricted	GUDMAP:9168	graded expression
TS23: renal capsule	Absent		GUDMAP:9168
TS23: nephrogenic zone	Absent		GUDMAP:9168
TS23: nephrogenic interstitium	Absent		GUDMAP:9168
TS23: cap mesenchyme	Absent		GUDMAP:9168
TS23: pretubular aggregate	Absent		GUDMAP:9168
TS23: ureteric tip	Absent		GUDMAP:9168
TS23: ureteric tree terminal branch excluding tip itself	Absent		GUDMAP:9168
TS23: renal vesicle	Absent		GUDMAP:9168
TS23: comma-shaped body	Absent		GUDMAP:9168
TS23: upper limb of comma-shaped body	Absent		GUDMAP:9168
TS23: lower limb of comma-shaped body	Absent		GUDMAP:9168
TS23: s-shaped body	Absent		GUDMAP:9168
TS23: renal connecting tubule of s-shaped body	Absent		GUDMAP:9168
TS23: distal segment of s-shaped body	Absent		GUDMAP:9168
TS23: medial segment of s-shaped body	Absent		GUDMAP:9168
TS23: proximal segment of s-shaped body	Absent		GUDMAP:9168
TS23: visceral epithelium of s-shaped body	Absent		GUDMAP:9168
TS23: parietal epithelium of s-shaped body	Absent		GUDMAP:9168
TS23: renal medullary interstitium	Absent		GUDMAP:9168
TS23: renal medullary vasculature	Absent		GUDMAP:9168
TS23: renal medullary arterial system	Absent		GUDMAP:9168
TS23: renal medullary venous system	Absent		GUDMAP:9168
TS23: renal medullary capillary	Absent		GUDMAP:9168
TS23: medullary collecting duct	Absent		GUDMAP:9168
TS23: renal pelvis	Absent		GUDMAP:9168
TS23: pelvic urothelial lining	Absent		GUDMAP:9168
TS23: pelvic smooth muscle	Absent		GUDMAP:9168
TS23: perihilar interstitium	Absent		GUDMAP:9168
TS23: capillary loop renal corpuscle	Absent		GUDMAP:9168
TS23: visceral epithelium of capillary loop renal corpuscle	Absent		GUDMAP:9168
TS23: parietal epithelium of capillary loop renal corpuscle	Absent		GUDMAP:9168
TS23: presumptive mesangium of capillary loop renal corpuscle	Absent		GUDMAP:9168
TS23: presumptive endothelium of capillary loop renal corpuscle	Absent		GUDMAP:9168
TS23: associated interstitium of capillary loop renal corpuscle	Absent		GUDMAP:9168
TS23: maturing renal corpuscle	Absent		GUDMAP:9168
TS23: maturing glomerular tuft	Absent		GUDMAP:9168
TS23: glomerular capillary system of maturing glomerular tuft	Absent		GUDMAP:9168
TS23: glomerular basement membrane of maturing renal corpuscle	Absent		GUDMAP:9168
TS23: glomerular mesangium of maturing glomerular tuft	Absent		GUDMAP:9168
TS23: visceral epithelium of maturing renal corpuscle	Absent		GUDMAP:9168
TS23: Bowman's capsule of maturing renal corpuscle	Absent		GUDMAP:9168
TS23: parietal epithelium of maturing renal corpuscle	Absent		GUDMAP:9168
TS23: glomerular mesangium of maturing renal corpuscle	Absent		GUDMAP:9168
TS23: juxtaglomerular arteriole	Absent		GUDMAP:9168
TS23: cortical collecting duct	Absent		GUDMAP:9168
TS23: renal cortical interstitium	Absent		GUDMAP:9168
TS23: renal cortical vasculature	Absent		GUDMAP:9168
TS23: renal cortical arterial system	Absent		GUDMAP:9168
TS23: renal cortical venous system	Absent		GUDMAP:9168
TS23: renal cortical capillary	Absent		GUDMAP:9168
TS23: developing capillary loop stage nephron group	Absent		GUDMAP:9168
TS23: collecting duct	Absent		GUDMAP:9168
TS23: renal interstitium	Absent		GUDMAP:9168
TS23: renal vasculature	Absent		GUDMAP:9168
TS23: early nephron	Absent		GUDMAP:9168
TS23: renal connecting tubule	Absent		GUDMAP:9168
TS23: anlage of loop of Henle of cortical renal tubule	Ambiguous		GUDMAP:9168
TS23: cortical renal tubule of maturing nephron group	Present	Regionally restricted	GUDMAP:9168	graded expression
TS23: early proximal tubule of maturing nephron	Present		GUDMAP:9168
TS23: early distal tubule of maturing nephron	Present	Regionally restricted	GUDMAP:9168
TS23: cortical renal tubule of capillary loop nephron group	Present		GUDMAP:9168
TS23: renal connecting tubule of capillary loop nephron	Absent		GUDMAP:9168
TS23: renal connecting tubule of maturing nephron	Absent		GUDMAP:9168
TS23: early distal tubule of capillary loop nephron	Ambiguous		GUDMAP:9168
TS23: early proximal tubule of capillary loop nephron	Ambiguous		GUDMAP:9168

GUDMAP:9169 ©

Specimen GUDMAP:9169: embryonic day 15.5 (more

)
Note: Labeling was visualized using BM purple.

Structure	Level	Image
TS23: ureter	Absent	GUDMAP:9169
TS23: urothelium of ureter	Absent	GUDMAP:9169
TS23: superficial cell layer of ureter	Absent	GUDMAP:9169
TS23: intermediate cell layer of ureter	Absent	GUDMAP:9169
TS23: basal cell layer of ureter	Absent	GUDMAP:9169
TS23: ureteral mesenchyme	Absent	GUDMAP:9169
TS23: ureteral mesenchyme subepithelial layer	Absent	GUDMAP:9169
TS23: ureteral smooth muscle layer	Absent	GUDMAP:9169
TS23: ureteral smooth muscle layer smooth muscle component	Absent	GUDMAP:9169
TS23: ureteral smooth muscle layer interstitium	Absent	GUDMAP:9169
TS23: ureteral mesenchyme outer layer	Absent	GUDMAP:9169
TS23: ureteral vasculature	Absent	GUDMAP:9169

GUDMAP:10924 ©

Specimen GUDMAP:10924: postnatal adult (more

)
Note: This animal was sexually mature. Labeling was visualized using BM purple.

Structure	Level	Pattern	Image	Note
TS28: urinary system	Present		GUDMAP:10924
TS28: metanephros	Present	Regionally restricted	GUDMAP:10924
TS28: renal cortex	Present	Regionally restricted	GUDMAP:10924
TS28: cortical renal tubule	Present	Regionally restricted	GUDMAP:10924
TS28: renal proximal tubule	Present	Regionally restricted	GUDMAP:10924	graded expression
TS28: renal proximal convoluted tubule	Present	Regionally restricted	GUDMAP:10924	graded expression; expression absent from a subset of renal proximal convoluted tubules likely a portion or all of S1
TS28: segment 2 of proximal tubule	Present		GUDMAP:10924
TS28: proximal straight tubule, cortical portion	Present		GUDMAP:10924
TS28: renal medulla	Present	Regionally restricted	GUDMAP:10924
TS28: outer renal medulla	Present	Regionally restricted	GUDMAP:10924
TS28: outer stripe of outer medulla	Present	Regionally restricted	GUDMAP:10924
TS28: loop of Henle of outer stripe of outer medulla	Present		GUDMAP:10924
TS28: proximal straight tubule of outer stripe of outer medulla	Present		GUDMAP:10924
TS28: inner stripe of outer medulla	Present	Regionally restricted	GUDMAP:10924
TS28: loop of Henle of inner stripe of outer medulla	Present		GUDMAP:10924
TS28: premacula segment of distal straight tubule of inner stripe of inner medulla	Present		GUDMAP:10924
TS28: mature renal corpuscle	Absent		GUDMAP:10924
TS28: renal connecting tubule	Absent		GUDMAP:10924
TS28: cortical collecting duct	Absent		GUDMAP:10924
TS28: renal cortical interstitium	Absent		GUDMAP:10924
TS28: renal cortical vasculature	Absent		GUDMAP:10924
TS28: inner renal medulla	Absent		GUDMAP:10924
TS28: renal pelvis	Absent		GUDMAP:10924
TS28: outer medullary collecting duct	Absent		GUDMAP:10924
TS28: outer medullary interstitium	Absent		GUDMAP:10924
TS28: renal distal tubule	Ambiguous		GUDMAP:10924
TS28: thin descending limb of inner stripe of outer medulla	Ambiguous		GUDMAP:10924
TS28: segment 1 of proximal tubule	Ambiguous		GUDMAP:10924

GUDMAP:10925 ©

Specimen GUDMAP:10925: postnatal adult (more

)
Note: This animal was sexually mature. Labeling was visualized using BM purple.

Structure	Level	Pattern	Image	Note
TS28: ureter	Absent		GUDMAP:10925

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