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Gene Expression Data
Assay Details
Assay
Reference: J:171409 GUDMAP Consortium, GUDMAP: the GenitoUrinary Development Molecular Anatomy Project. www.gudmap.org. 2004;
Assay type: RNA in situ
MGI Accession ID: MGI:5541639
Gene symbol: Vldlr
Gene name: very low density lipoprotein receptor
Probe: RIKEN clone 9630026O22 subclone
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Results
Specimen GUDMAP:10028: embryonic day 10.5 (more )
Note: Labeling was visualized using NBT/BCIP.
Structure Level Pattern Image Note
TS17: genitourinary system Ambiguous GUDMAP:10028 expression uncertain
Specimen GUDMAP:10402: embryonic day 13.5 (more )
Note: Labeling was visualized using NBT/BCIP.
Structure Level Pattern Image Note
TS21: interstitium of the testis Absent GUDMAP:10402
TS21: mesonephric tubule of male Absent GUDMAP:10402
TS21: nephric duct of male, mesonephric portion Absent GUDMAP:10402
TS21: paramesonephric duct of male, mesonephric portion Absent GUDMAP:10402
TS21: nephric duct of male, rest of Absent GUDMAP:10402
TS21: paramesonephric duct of male, rest of Absent GUDMAP:10402
TS21: coelomic epithelium of male mesonephros Absent GUDMAP:10402
TS21: coelomic epithelium of testis Ambiguous GUDMAP:10402 the expression may be background
TS21: mesonephric mesenchyme of male Ambiguous GUDMAP:10402 the expression may be background
TS21: primary sex cord Ambiguous GUDMAP:10402 the expression may be background
Specimen GUDMAP:10403: embryonic day 13.5 (more )
Note: Labeling was visualized using NBT/BCIP. Male and female were examined; only the male is shown. Annotators reported the male expression pattern in the metanephros is identical to female.
Structure Level Pattern Image Note
TS21: urinary system Ambiguous GUDMAP:10403 uncertain expression
Specimen GUDMAP:10404: embryonic day 13.5 (more )
Note: Labeling was visualized using NBT/BCIP.
Structure Level Pattern Image Note
TS21: mesonephric tubule of female Absent GUDMAP:10404
TS21: nephric duct of female, mesonephric portion Absent GUDMAP:10404
TS21: paramesonephric duct of female, mesonephric portion Absent GUDMAP:10404
TS21: nephric duct of female, rest of Absent GUDMAP:10404
TS21: paramesonephric duct of female, rest of Absent GUDMAP:10404
TS21: coelomic epithelium of female mesonephros Absent GUDMAP:10404
TS21: mesonephric mesenchyme of female Ambiguous GUDMAP:10404 uncertain expression
TS21: ovary Ambiguous GUDMAP:10404 the expression may be background
Specimen GUDMAP:10405: embryonic day 13.5 (more )
Note: Labeling was visualized using NBT/BCIP. Male and female were examined; only the female is shown. Annotators reported the male expression pattern in the urogenital sinus is identical to female.
Structure Level Pattern Image Note
TS21: urinary system Present GUDMAP:10405
TS21: urogenital sinus Present GUDMAP:10405
TS21: primitive bladder Present GUDMAP:10405
TS21: ureter Absent GUDMAP:10405
TS21: urothelium of primitive bladder Ambiguous GUDMAP:10405 possible expression
Specimen GUDMAP:11314: embryonic day 15.5 (more )
Note: Labeling was visualized using BM purple.
Structure Level Pattern Image Note
TS23: urinary system Present GUDMAP:11314
TS23: metanephros Present Regionally restricted GUDMAP:11314
TS23: nephrogenic zone Present Regionally restricted GUDMAP:11314
TS23: ureteric tip Present GUDMAP:11314
TS23: ureteric tree terminal branch excluding tip itself Present GUDMAP:11314
TS23: renal cortex Present Regionally restricted GUDMAP:11314
TS23: cortical collecting duct Present Regionally restricted GUDMAP:11314
TS23: renal pelvis Present GUDMAP:11314
TS23: pelvic smooth muscle Present GUDMAP:11314
TS23: collecting duct Present GUDMAP:11314
TS23: nephrogenic interstitium Absent GUDMAP:11314
TS23: cap mesenchyme Absent GUDMAP:11314
TS23: pretubular aggregate Absent GUDMAP:11314
TS23: renal vesicle Absent GUDMAP:11314
TS23: comma-shaped body Absent GUDMAP:11314
TS23: s-shaped body Absent GUDMAP:11314
TS23: capillary loop renal corpuscle Absent GUDMAP:11314
TS23: maturing renal corpuscle Absent GUDMAP:11314
TS23: renal connecting tubule Absent GUDMAP:11314
TS23: renal cortical interstitium Absent GUDMAP:11314
TS23: renal cortical vasculature Absent GUDMAP:11314
TS23: immature loop of Henle Absent GUDMAP:11314
TS23: renal medullary interstitium Absent GUDMAP:11314
TS23: renal medullary vasculature Absent GUDMAP:11314
TS23: pelvic urothelial lining Absent GUDMAP:11314
TS23: perihilar interstitium Absent GUDMAP:11314
TS23: renal interstitium Absent GUDMAP:11314
TS23: renal vasculature Absent GUDMAP:11314
TS23: late tubule Absent GUDMAP:11314
TS23: cortical renal tubule Ambiguous GUDMAP:11314
TS23: medullary collecting duct Ambiguous GUDMAP:11314
Specimen GUDMAP:11315: embryonic day 15.5 (more )
Note: Labeling was visualized using BM purple.
Structure Level Pattern Image Note
TS23: ureter Present GUDMAP:11315
TS23: ureteral mesenchyme Present GUDMAP:11315
TS23: ureteral smooth muscle layer Present GUDMAP:11315
TS23: urothelium of ureter Absent GUDMAP:11315
TS23: ureteral mesenchyme outer layer Absent GUDMAP:11315
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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05/28/2024
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