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Mir6340 Gene Detail
Summary
  • Symbol
    Mir6340
  • Name
    microRNA 6340
  • Synonyms
    mmu-mir-6340
Location &
Maps
more
  • Sequence Map
    Chr2:173542823-173542941 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 2, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    24 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5531291
 miRNA gene Chr2:173542823-173542941 (-)
129S1/SvImJ MGP_129S1SvImJ_G0008616
 miRNA gene Chr2:180005020-180005138 (-)
A/J MGP_AJ_G0008606
 miRNA gene Chr2:172424375-172424493 (-)
AKR/J MGP_AKRJ_G0008595
 miRNA gene Chr2:177628234-177628352 (-)
BALB/cJ MGP_BALBcJ_G0008593
 miRNA gene Chr2:172827509-172827627 (-)
C3H/HeJ MGP_C3HHeJ_G0008535
 miRNA gene Chr2:178007903-178008021 (-)
C57BL/6NJ MGP_C57BL6NJ_G0008805
 miRNA gene Chr2:185182466-185182584 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0007781
 miRNA gene Chr2:165656380-165656498 (-)
CAST/EiJ MGP_CASTEiJ_G0008390
 miRNA gene Chr2:178728091-178728209 (-)
CBA/J MGP_CBAJ_G0008499
 miRNA gene Chr2:192099839-192099957 (-)
DBA/2J MGP_DBA2J_G0008533
 miRNA gene Chr2:171515762-171515880 (-)
FVB/NJ MGP_FVBNJ_G0008554
 miRNA gene Chr2:170151811-170151929 (-)
LP/J MGP_LPJ_G0008623
 miRNA gene Chr2:179922056-179922174 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0008517
 miRNA gene Chr2:195015038-195015156 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0008788
 miRNA gene Chr2:177645122-177645240 (-)
PWK/PhJ MGP_PWKPhJ_G0008315
 miRNA gene Chr2:171328614-171328732 (-)
SPRET/EiJ MGP_SPRETEiJ_G0008171
 miRNA gene Chr2:176676107-176676225 (-)
WSB/EiJ MGP_WSBEiJ_G0008474
 miRNA gene Chr2:178592876-178592994 (-)



Homology
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Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    22
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 102465173 NCBI Gene Model | MGI Sequence Detail 119 C57BL/6J ±  kb
transcript NR_105758 RefSeq | MGI Sequence Detail 119 ZRU/MplStud  
For the selected sequence
Other Database
Links
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miRBase MI0021868
References
more
  • Summaries
    All 4
  • Earliest
    J:105741 Griffiths-Jones S, et al., miRBase: microRNA sequences, targets and gene nomenclature. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D140-4
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory